View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8657_low_11 (Length: 281)
Name: NF8657_low_11
Description: NF8657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8657_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 28440879 - 28441135
Alignment:
| Q |
18 |
attttggggaaaaagatgagaaatggttgcatcagaaatgaaaaatatgacacaaggatgcgtgattaccgtgatagaatactcactttttgttgaaata |
117 |
Q |
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| T |
28440879 |
attttggggaaaaagatgagaaatggttgcatcagaaatgaaaaatatgacacaaggatgcgtgattaccgtgatagaatactcactttttgttgaaata |
28440978 |
T |
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| Q |
118 |
tacatatgaagtgtcgtttcataacatacaaagtgcaagaagctcatgacatatgcattaactctattctcccatgattcttaccacaaaacttctgtcc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
28440979 |
tacatatgaagtgtcgtttcataacatacaaagtgcaagaagctcatgacatatgcattaactctattctcccatgattcttaccccaaaacttctgtcc |
28441078 |
T |
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| Q |
218 |
ccatcttccttttatcactttgatgatgaatagatacccaccactaactaacaccaa |
274 |
Q |
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| T |
28441079 |
ccatcttccttttatcactttgatgatgaatagatacccaccactaactaacaccaa |
28441135 |
T |
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