View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8660_low_10 (Length: 230)
Name: NF8660_low_10
Description: NF8660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8660_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 698329 - 698135
Alignment:
| Q |
17 |
tctcgagcaatttcacatgtgattaaacaaatagataaacttcaataactcaattcttaatctcatatccctacttctaaattttcaattaccagtatgt |
116 |
Q |
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| T |
698329 |
tctcgagcaatttcacatgtgattatacaaatagataaacttcaataactcaattcttaatctcatgtccctacttctaaattttcaattaccagtatgt |
698230 |
T |
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| Q |
117 |
tttttaagtttaatgttgatgatggtgcacctgtgaacaataaatggagcattgtaactgttatttgtgatacaaatgacttggtgatggtcacg |
211 |
Q |
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| T |
698229 |
tttttaagtttaatgttgatgatggtgcacctgtgaacaataaatggagcattgtaactgttatctgtgatacaaatgacttggtgatggtcacg |
698135 |
T |
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