View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8660_low_8 (Length: 239)
Name: NF8660_low_8
Description: NF8660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8660_low_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 1145034 - 1144796
Alignment:
| Q |
1 |
tgtgtacaccgtaaaacaactactgaattgagcttataatttaaagcaacaatctaagagtgttttaaaaaccaagtaatcaaactaacatacatacctc |
100 |
Q |
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| T |
1145034 |
tgtgtacaccgtaaaacaactactgaattgagcttataatttaaagcaacaatctaagagtgttttaaaaaccaagtaatcaaactaacatacatacctc |
1144935 |
T |
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| Q |
101 |
cagagttcccaaaagctgacccagcattcttttgttcctattaaccaagcttgggtcttcattcttaggcaataccctcggaacatgttctgtagtagga |
200 |
Q |
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| T |
1144934 |
cagagttcccaaaagctgacccagcattcttttgttcctattaaccaagcttgggtcttcattcttaggcaataccctcggaacatgttctgtagtagga |
1144835 |
T |
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| Q |
201 |
atctcagaagcctgacatgaagaacggactatagcatta |
239 |
Q |
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| T |
1144834 |
atgtcagaagcctgacatgaagaacagactatagcatta |
1144796 |
T |
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