View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8661_low_17 (Length: 353)
Name: NF8661_low_17
Description: NF8661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8661_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 15 - 317
Target Start/End: Original strand, 37258642 - 37258944
Alignment:
| Q |
15 |
gaaatcaccttccacgaccaacggtggatgtggaacgaggtccattccgatggaatcaacgacgttgattcgtcgtagagcttcgacttcttgtccaaca |
114 |
Q |
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| T |
37258642 |
gaaatcaccttccacgaccaacggtggatgtggaacgaggtccattccgatggaatcaacgacgttgattcgtcgtagagcttcgacttcttgtccaaca |
37258741 |
T |
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| Q |
115 |
cgtgcaccaatacataatgctttggatgtttcttggaggagattcttggtcttgagttcggagaagaatttggcgaaaactgggatcttgcggttccagt |
214 |
Q |
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| T |
37258742 |
cgtgcaccaatacataatgctttggatgtttcttggaggagattcttggtcttgagttcggagaagaatttggcgaaaactgggatcttgcggttccagt |
37258841 |
T |
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| Q |
215 |
cgcgtgttgtccatatttttcgtagttttgtgttgagagttttgttgagttgacgttggatgtaggcttcataggatttgtaaccggatcgtattgttag |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
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| T |
37258842 |
cgcgtgttgtccatatttttcgtagttttgtgttgagagttttgttgagttgacgttggatgtaggcttcataggacttgtaaccgggtcgtattgttag |
37258941 |
T |
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| Q |
315 |
gtc |
317 |
Q |
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| T |
37258942 |
gtc |
37258944 |
T |
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