View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8661_low_41 (Length: 254)
Name: NF8661_low_41
Description: NF8661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8661_low_41 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 8231520 - 8231553
Alignment:
| Q |
85 |
caaccggtggtccaaatcttcattttatctctat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
8231520 |
caaccggtggtccaaatcttcattttatctctat |
8231553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University