View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8661_low_52 (Length: 241)
Name: NF8661_low_52
Description: NF8661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8661_low_52 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6967985 - 6968207
Alignment:
| Q |
1 |
caagattgtccccaacacaaattctgtttcattctatccagcttcagacaaaagattctaccttctcacatttcatcgtagtcatcgcgatttcgttgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6967985 |
caagattgtccccaacacaaattctgtttcattctatccagcttcagacaaaagattctaccttctcacatttcatcgtagtcatcgcgatttcgttgag |
6968084 |
T |
|
| Q |
101 |
aaatcttaccttaaccatgttttggaacaaggtaaagaaattggtctaagtaagaggcagagaaagctttacacaaattgcacaggtaatggtgaatatg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6968085 |
aaatcttaccttaaccatgttttggaacaaggtaaagaaattggtctaagtaagaggcagagaaagctttacacaaattgcacaggtaatggtgaatatg |
6968184 |
T |
|
| Q |
201 |
aaaggggaggtaagtggagtcat |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
6968185 |
aaaggggaggtaagtggagtcat |
6968207 |
T |
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