View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8661_low_55 (Length: 240)
Name: NF8661_low_55
Description: NF8661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8661_low_55 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 21466567 - 21466789
Alignment:
| Q |
18 |
gaaattggtaactgttctgagctagtgaacttgtttttgtatgagaatgatctttctggtgagattccttttgagataggtaagcttatgaagcttgaaa |
117 |
Q |
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| T |
21466567 |
gaaattggtaactgttctgagcttgtgaacttgtttttgtatgagaatgatctttctggtgagattccttttgagataggtaagcttgtgaagcttgaaa |
21466666 |
T |
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| Q |
118 |
agattttgctatggcaaaatagttttgttggtagcatacctgaggaaattggaaactgtagtagtttgaagattcttgatttttctttgaattatttctc |
217 |
Q |
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| T |
21466667 |
agattttgctatggcaaaatagttttgttggtagcatacctgaggaaattggaaactgtagtagtttggagattcttgatttttctttgaattatttctc |
21466766 |
T |
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| Q |
218 |
tggtggaataccgaaaagtttag |
240 |
Q |
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| T |
21466767 |
tggtggaataccgaaaagtttag |
21466789 |
T |
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