View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8661_low_58 (Length: 236)
Name: NF8661_low_58
Description: NF8661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8661_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 45794879 - 45795098
Alignment:
| Q |
1 |
ccatgaatttcgcagtctctgtagaattggcgctgcgcgactgcgtataagcttccttctccgccgtcaattttgcagttgaagaatgctgcatgatcag |
100 |
Q |
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| T |
45794879 |
ccatgaatttcgcagtctctgtagaattggcgctgcgcgactgcgtataagcttccttctccgccgtcaattttgcagctgaagaatgctgcatgatcag |
45794978 |
T |
|
| Q |
101 |
aaagtacaaggagtgctgatgctcctggtacgctagctggagctgtgaaacccatatctttgcagatgaatcttttgccctttaccactgcatttcacaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45794979 |
aaagtacaaggagtgctgatgctcctggtacgctagctggagctgtgaaacccatatctttgcagatgaatcttttgccctttaccactgcatttcacaa |
45795078 |
T |
|
| Q |
201 |
gagtcaaaatcaaatgttgt |
220 |
Q |
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|||| ||||||||||||||| |
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| T |
45795079 |
gagtgaaaatcaaatgttgt |
45795098 |
T |
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