View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8662_low_1 (Length: 1056)
Name: NF8662_low_1
Description: NF8662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8662_low_1 |
 |  |
|
| [»] scaffold0208 (3 HSPs) |
 |  |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold0363 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 344; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 302 - 777
Target Start/End: Complemental strand, 47938313 - 47937829
Alignment:
| Q |
302 |
aagccatcaattttgaaagttggtttaccaaatgtttgaatttttnnnnnnnttagggactttggggtttcttatatgttgaaattagtgtttggatggg |
401 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47938313 |
aagccatcaattttgaaagttggtttaccaaatgtttgaatttttaaaaaaattagggactttggggtttcttatatgttgaaattagtgtttggatggg |
47938214 |
T |
 |
| Q |
402 |
taattttctgtctagtatgaatgaaagataaacccaacattactcactaaaataaa------------cccaaatgacttttttgacgatggagggtttt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
47938213 |
taattttctgtctagtatgaatgaaagataaacccaacattactcactaaaataaaagttgagctaaacccaaatgacttttttgacgatggagggtttt |
47938114 |
T |
 |
| Q |
490 |
tgttggaactgagtcagctaattgaagtaatggtctgatcatttaagagttgaccacgatgaggtgtttggtaatcaagattagccattagttcattttt |
589 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47938113 |
tgttggaactgagtcagctaattgaagtaatggtctgatcatttaagagttgaccacgatgaggtgtttggtaatcaagattagccattagttcattttt |
47938014 |
T |
 |
| Q |
590 |
agatacggtaaaatttctcataactaaagtgtttattttttatgat---taatttctatagatgaaatgctcaaccactcagatgtttaggagtgacttt |
686 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47938013 |
agatacggtaaaatttctcataactaaagtgtttattttttattttttatgatttctatcgatgaaatgctcaaccactcagatgtttaggagtgacttt |
47937914 |
T |
 |
| Q |
687 |
atctctaatttgattgttaggnnnnnnnnacaaggtaaaattacatcctcgaagtcgaagagtgatgctacattaaattctgaacattatc |
777 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| |
|
|
| T |
47937913 |
atctctaatttgattgttaggttttttttacaaggtaaaattacatcc------tccaagagtgatgctacattaaattctgaacagtatc |
47937829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 873 - 1040
Target Start/End: Complemental strand, 47920524 - 47920341
Alignment:
| Q |
873 |
ggcttgtggattgatacctacccagaggagtgatataatgattgctattagacccgaccatacaaaaacaatg--------------------tcccatc |
952 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
47920524 |
ggcttgtggattgatacctaaccagaggagtgatataatgattgctattagacccgaccatacaaaaacaatggtgggtgtcctccctcttcttcccatc |
47920425 |
T |
 |
| Q |
953 |
aaaccttttgcaaaaggatagagatgagccagccaagacccagaaactgaagaaaacaccgcctagtaaacggctccaccgtggtatg |
1040 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
47920424 |
aaaccttttgcaaaaggatagagatgagcca----agacccagaaactgaagaaaacaccgcctagttaacggctccactgtggtatg |
47920341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 779 - 841
Target Start/End: Complemental strand, 47920587 - 47920525
Alignment:
| Q |
779 |
aaagagaaactacaaaggaaaattgtaataatctgacaaaaagaatgagctaccatcatggga |
841 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47920587 |
aaagagaaactacaaaggaaaattgtaataatctgacaaaaagaatgagctaccatcatggga |
47920525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 35150076 - 35150003
Alignment:
| Q |
21 |
tcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
35150076 |
tcaatatagtgtttcttaatgatgacattaatgatacaatatggtgcaactgaataaaacttttgtgtcaattg |
35150003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 3813256 - 3813185
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
3813256 |
agatggatttcaatatagtgtttcttaatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
3813185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 30219216 - 30219260
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
30219216 |
aatcccaataaatcaaacatgaataccgctctgataccacgtgtt |
30219260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 43540195 - 43540154
Alignment:
| Q |
201 |
aaaatcccaataaatcaaacatgaagaccgctctgataccac |
242 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||||||||||| |
|
|
| T |
43540195 |
aaaatctcaatagatgaaacatgaagaccgctctgataccac |
43540154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 154; Significance: 4e-81; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 785 - 1040
Target Start/End: Original strand, 29916506 - 29916777
Alignment:
| Q |
785 |
aaactacaaaggaaaattgtaataatctgacaaaaagaatgagctaccatcatgggaacttgaatgaaccgcctatttggtctgtaccggcttgtggatt |
884 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29916506 |
aaactccaaaggaaaattgtaataatctgacaaaaagaatgagctatcatcatgggaactggaatgaaccgcctatttggtctgtaccggctggtggatt |
29916605 |
T |
 |
| Q |
885 |
gatacctacccagaggagtgatataatgattgctattagacccgaccatacaaaaacaatg--------------------tcccatcaaaccttttgca |
964 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29916606 |
gatagccacccagaggagtgatataatgattgctatcagacccgaccatacaaaaacaatggtgggtgtcctccctcttcttcccatcaaaccttttgca |
29916705 |
T |
 |
| Q |
965 |
aaaggatagagatgagccagccaagacccagaaactgaagaaaacaccgcctagtaaacggctccaccgtggtatg |
1040 |
Q |
| |
|
|||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29916706 |
aaaggatagagatg----agccaagacccaaaagctgaagaaaacaccgcctagtaaacggctccactgtggtatg |
29916777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 5186905 - 5186977
Alignment:
| Q |
22 |
caatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
5186905 |
caatacagtgtttcttaatgacaacattaatgatacaatatggtgcaactgaagaaaactttcgtgtcaattg |
5186977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 26959221 - 26959150
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
26959221 |
agatggatttcaatatagtgtttcttaatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
26959150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 48165272 - 48165334
Alignment:
| Q |
32 |
tttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| ||||| |
|
|
| T |
48165272 |
tttcttaatggtgacattaatgatacaatatggtgcaactaaataaagcttttgtgttaattg |
48165334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 49976804 - 49976760
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
49976804 |
aatcccaataaatcaaacatgaagaccactctgataccacttgtt |
49976760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 24288196 - 24288158
Alignment:
| Q |
209 |
aataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24288196 |
aataaatcaaacatgaagaccgctctgataccacttgtt |
24288158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 10735421 - 10735368
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
10735421 |
tgtttcttcatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
10735368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 10949190 - 10949137
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
10949190 |
tgtttcttcatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
10949137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 8e-27; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 6101571 - 6101653
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
6101571 |
agatggatttcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcagctgaataaaacttttgtgtcaattg |
6101653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 17579760 - 17579822
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaat |
92 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
17579760 |
tgtttctcaatggtgacattaatgatacaatatggtgcaacttaagaaaacttttgtgtcaat |
17579822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 21772677 - 21772614
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaat |
75 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| |||| |
|
|
| T |
21772677 |
agatggatttcaatatagtgtttcttaatgatgacgttaatgatgcaatatggtgcaactgaat |
21772614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 25343845 - 25343802
Alignment:
| Q |
204 |
atcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25343845 |
atcccaataaatcaaacatgaagaccgctctgataccacttgtt |
25343802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 8652878 - 8652825
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
8652878 |
tgtttcttaatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
8652825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 8662723 - 8662767
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
8662723 |
aatcccaataaatcaaacataaagaccgctctgataccacttgtt |
8662767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 32031541 - 32031479
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaat |
92 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| || || |||||| | |||||||| |
|
|
| T |
32031541 |
tgtttctcaatggtgacattaatgatacaatatggtgctacttaagaaaactcttgtgtcaat |
32031479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 21196963 - 21197007
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
21196963 |
aatcctaataaatcaaacataaagaccgctctgataccacttgtt |
21197007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 3e-26; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 19061798 - 19061725
Alignment:
| Q |
21 |
tcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
19061798 |
tcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaactgaataaagctttcgtttcaattg |
19061725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 12688254 - 12688183
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
12688254 |
aatatagtgtttcttaatggtgacattaacgatacaatatggtgcatctgaataaaacttttgtgtcaattg |
12688183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 28527469 - 28527387
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
28527469 |
agatggatttcaatatagtgtttcttaatggtgacattaacgatacaatatggtgcatttgaataaaacttttgtgtcaattg |
28527387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 32096288 - 32096217
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| |||||||||| |
|
|
| T |
32096288 |
aatatagtgtttcttaatggtgacattaacgatacaagatggtgcatctgaataaaacttttgtgtcaattg |
32096217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 41293177 - 41293233
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgca |
68 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
41293177 |
agatggatttcaatatagtgtttcttaatggtgacattaacgatacaatatggtgca |
41293233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 28531424 - 28531468
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28531424 |
aatcccaataaatcaaacatgaagaccgctctgataccacttgtt |
28531468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 32096903 - 32096940
Alignment:
| Q |
204 |
atcccaataaatcaaacatgaagaccgctctgatacca |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32096903 |
atcccaataaatcaaacatgaagaccgctctgatacca |
32096940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 19066046 - 19066088
Alignment:
| Q |
200 |
aaaaatcccaataaatcaaacatgaagaccgctctgataccac |
242 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19066046 |
aaaaatcccaataaatcaaacgcgaagaccgctctgataccac |
19066088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 12692223 - 12692267
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
12692223 |
aatcctaataaatcaaacatgaagacggctctgataccacttgtt |
12692267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208 (Bit Score: 59; Significance: 2e-24; HSPs: 3)
Name: scaffold0208
Description:
Target: scaffold0208; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 29201 - 29283
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
29201 |
agatggatttcaatatagtgtttcttaatggtgacattaacgatacaatatggtgcatctgaataaaacttttgtgtcaattg |
29283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 10478 - 10549
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
10478 |
aatatagtgtttcttaatggtgacattaacgatacaatatggtgcatctgaataaaacttttgtgtcaattg |
10549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 6734 - 6696
Alignment:
| Q |
209 |
aataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
6734 |
aataaatcaaacatgaagacggctctgataccacttgtt |
6696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 59; Significance: 2e-24; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 11841830 - 11841748
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
11841830 |
agatggatttcaatatagtgtttcttaatgatgacattaatgatgcaatatggtgcaactgaataaaacttttgtgtcaattg |
11841748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 49155755 - 49155837
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
49155755 |
agatggatttcaatatagtgtttcttaatggtgacattaacgatacaatatggtgcatttgaataaaacttttgtgtcaattg |
49155837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 10762732 - 10762661
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
10762732 |
aatatagtgtttcttaatggtgacattaacgacacaatatggtgcatctgaataaaacttttgtgtcaattg |
10762661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 42193307 - 42193236
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
42193307 |
aatatagtgtttcttaatggtgacattaacgatacaatatggtgcatgtgaataaaacttttgtgtcaattg |
42193236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 49151829 - 49151785
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
49151829 |
aatcccaataaatcaaacatgaagaccgctctgataccacttgtt |
49151785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 10240283 - 10240230
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
10240283 |
tgtttcttaatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
10240230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 42197104 - 42197148
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42197104 |
aatcctaataaatcaaacatgaagaccgctctgataccacttgtt |
42197148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 10244282 - 10244320
Alignment:
| Q |
209 |
aataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10244282 |
aataaatcaaacatgaagaccgctctgataccacttgtt |
10244320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 38455494 - 38455532
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgatacca |
241 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
38455494 |
aatcctaataaatcaaacatgaagaccgctctgatacca |
38455532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 38451137 - 38451084
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||||||||||| |||| ||||||| |
|
|
| T |
38451137 |
tgtttcttaatgatgacatcaatgatgcaatatggtgcaactgaatcaaacttt |
38451084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 11846016 - 11846049
Alignment:
| Q |
214 |
atcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
11846016 |
atcaaacatgaagaccgctctgataccacttgtt |
11846049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 59; Significance: 2e-24; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 38145959 - 38145877
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
38145959 |
agatggatttcaatatagtgtttcttaatggtgacattaacgatacaatatggtgcatctgaataaaacttttgtgtcaattg |
38145877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 25383622 - 25383551
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
25383622 |
aatatagtgtttcttaatggtgacattaacgatacaatatggtgcatgtgaataaaacttttgtgtcaattg |
25383551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 31056121 - 31056192
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
31056121 |
agatggatttcaatatagtgtttcttaatgatgacattaatgatgcaatatggtgcaactgaatcaaacttt |
31056192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 31051769 - 31051722
Alignment:
| Q |
200 |
aaaaatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
31051769 |
aaaaatctcaatagatcaaacatgaagaccgctctgataccacttgtt |
31051722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 25387452 - 25387490
Alignment:
| Q |
209 |
aataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25387452 |
aataaatcaaacatgaagaccgctctgataccacttgtt |
25387490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 5e-22; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 5544271 - 5544189
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
5544271 |
agatggatttcaatatagtgtttcttaatggtgacattaacgatacaatatggtgcatatgaataaaacttttgtgtcaattg |
5544189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 10704194 - 10704236
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggt |
65 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10704194 |
aatatagtgtttcttaatggtgacattaatgatacaatatggt |
10704236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 32891106 - 32891062
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32891106 |
aatcccaataaatcaaacatgaagaccgctctgataccacttgtt |
32891062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 39729310 - 39729250
Alignment:
| Q |
32 |
tttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaat |
92 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
39729310 |
tttctcaatggtgacattaatgatacaatatggtgcaacttaagaaaacttttgtgtcaat |
39729250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 31373510 - 31373553
Alignment:
| Q |
204 |
atcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
31373510 |
atcccaataaatcaaacatgaagaccgttctgataccacttgtt |
31373553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 14414059 - 14414121
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaat |
92 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||| || |||||| | |||||||| |
|
|
| T |
14414059 |
tgtttctcaatggtgacattaatgattcaatatggtgcaacttaagaaaactcttgtgtcaat |
14414121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 30413332 - 30413375
Alignment:
| Q |
36 |
ttaatggtgacattaatgatacaatatggtgcaacagaataaaa |
79 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||| |||||||| |
|
|
| T |
30413332 |
ttaatggcgacattaatgatacaatatgatgcaaccgaataaaa |
30413375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 3e-20; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 13460113 - 13460184
Alignment:
| Q |
23 |
aatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaattg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
13460113 |
aatatagtgtttcttaatggtgacattaacgatacaatatggtgcatgtgaataaaacttttgtgtcaattg |
13460184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 13456317 - 13456273
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13456317 |
aatcctaataaatcaaacatgaagaccgctctgataccacttgtt |
13456273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 23341658 - 23341738
Alignment:
| Q |
12 |
agatggacatcaatatagtgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaat |
92 |
Q |
| |
|
||||||| |||||||||| || ||||||| |||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
23341658 |
agatggatgtcaatatagtaatttttaatggcaacattaatgatacaatatggtgcaactaaagaaaacttttgtgtcaat |
23341738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 31002591 - 31002551
Alignment:
| Q |
207 |
ccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
31002591 |
ccaataaatcaaacatgaagaccgctctgataccacttgtt |
31002551 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 35090592 - 35090636
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgataccacatgtt |
247 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
35090592 |
aatctcaataaatcaaacatgaagaccgctctgataccacttgtt |
35090636 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 35440008 - 35439972
Alignment:
| Q |
105 |
gcgcctaaagaactctgatataattattaagttatgt |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35440008 |
gcgcctaaagaactctgatataattattaagatatgt |
35439972 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 35086742 - 35086689
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaacttt |
83 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||| ||||| |||||||||| |
|
|
| T |
35086742 |
tgtttctcaatggtgacattaatgatactatatggcgcaaccacataaaacttt |
35086689 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 172832 - 172868
Alignment:
| Q |
203 |
aatcccaataaatcaaacatgaagaccgctctgatac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
172832 |
aatcccaataaatcaaacatgaagaccgctctgatac |
172868 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 4652 - 4590
Alignment:
| Q |
30 |
tgtttcttaatggtgacattaatgatacaatatggtgcaacagaataaaactttcgtgtcaat |
92 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||| || |||||| | |||||||| |
|
|
| T |
4652 |
tgtttctcaatggtgacattaatgattcaatatggtgcaacttaagaaaactcttgtgtcaat |
4590 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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