View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8663_low_11 (Length: 302)
Name: NF8663_low_11
Description: NF8663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8663_low_11 |
 | |
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| [»] scaffold0130 (1 HSPs) |
| | |
|
| [»] scaffold0016 (2 HSPs) |
| | |
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| [»] scaffold0022 (1 HSPs) |
| | |
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| [»] scaffold0319 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0019 (2 HSPs) |
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| [»] scaffold0107 (2 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0008 (1 HSPs) |
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| [»] scaffold0423 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 22638351 - 22638649
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
22638351 |
cgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttc |
22638450 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
22638451 |
actggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatt |
22638550 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22638551 |
tcgtcgatgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
22638649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 23200790 - 23200492
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
23200790 |
cgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttc |
23200691 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| |||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
23200690 |
acgggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatt |
23200591 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23200590 |
tcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
23200492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 298
Target Start/End: Complemental strand, 23626417 - 23626121
Alignment:
| Q |
3 |
aaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcac |
102 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
23626417 |
aaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatattgaaaaaagatcatcccaaggaggatgtagaaatgacttcgaatttcac |
23626318 |
T |
|
| Q |
103 |
tggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttc |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||| |
|
|
| T |
23626317 |
tggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttc |
23626218 |
T |
|
| Q |
202 |
gtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||| |
|
|
| T |
23626217 |
gtcgatgaaatggcaactcacaagccgctatgctattatgtcatgaataacggttgtgtagaagagcaacatgcagtctttgaaaaatcaaacactt |
23626121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 24911931 - 24912223
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||| || ||||| ||||||||||| ||||| || |||||||| |||||||| |||||||||||||||||| |
|
|
| T |
24911931 |
cgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatcttaaagaaggaccatcccaaagaggatgaagaaatgacttcaaatttc |
24912029 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||||||| || || ||| ||||||||||||||||||| |||| |||| ||| | |||||||| | |
|
|
| T |
24912030 |
actggatctgaccccagtctcgacatagtatgcaatgtggtatcaattctatctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgact |
24912129 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
|||| || |||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |
|
|
| T |
24912130 |
tcgttgacgaaatggcgacgcacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctttgaaaaaccaga |
24912223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 23813973 - 23813889
Alignment:
| Q |
188 |
tggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaaca |
272 |
Q |
| |
|
|||||||||| ||| |||||||||||| ||| | |||||| ||||||| ||||| ||||| |||||||||| ||||| ||||| |
|
|
| T |
23813973 |
tggaaagtgaattcaccgatgaaatggctatttagaagccattatgctactatgttatgaacaatggttgtgtcgaagatcaaca |
23813889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 18171795 - 18171497
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
18171795 |
cgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttc |
18171696 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||| |
|
|
| T |
18171695 |
actggatctgaccctagtctcgacatagtgtacaatgtggtttctatcctactggtggaatacaacgttcagtcagaaattaacgaagtgcaaagtgatt |
18171596 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18171595 |
tcgtcgatgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
18171497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 14342817 - 14342542
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| || |||||||||||||| |||||||||||| | |||| ||||||||||| ||||||||||||||| |
|
|
| T |
14342817 |
cgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattttgaagaaagattgttccaaagaggatgaggagatgacttcaaatttc |
14342718 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| | ||||||||| || ||||||||||| || ||||||| ||| ||||| | ||||||||||| || |||| ||| ||||| ||| |||||| ||| | |
|
|
| T |
14342717 |
acggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcctgtggaatacgatgtccagtcagagattaatgaagtggaaaatgact |
14342618 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
275 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
14342617 |
ttgtcgatgaaatggcaactcacaagccactatgctattatgtcatgaataatggctgtgtggaagaacaacatgc |
14342542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 18133692 - 18133578
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
|||||||||||||||||||| ||| |||| || |||||||||||||| |||||||||||| | |||| || |||||||| ||||||||||||||||| | |
|
|
| T |
18133692 |
atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcgttccaaagaagatgaggagatgacttcaaatttcacgg |
18133593 |
T |
|
| Q |
105 |
gatctgaccctagtc |
119 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
18133592 |
aatctgacccaagtc |
18133578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 3 - 298
Target Start/End: Original strand, 43180 - 43476
Alignment:
| Q |
3 |
aaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcac |
102 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
43180 |
aaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaggaggatgaagaactgacttcgaatttcac |
43279 |
T |
|
| Q |
103 |
tggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttc |
201 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| |
|
|
| T |
43280 |
gggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctactggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttc |
43379 |
T |
|
| Q |
202 |
gtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||||||||| || ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43380 |
gtcgatgaaatggaaactcacaaggcgctatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
43476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 223; Significance: 1e-123; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 126720 - 126422
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
126720 |
cgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttc |
126621 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||| ||| ||||||||||||| | |||||||||| |
|
|
| T |
126620 |
actggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaatacgacgtttagtcagaaattaacgaagttgaaagtgatt |
126521 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
126520 |
tcgtcgattaaatggcaactcacaatccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
126422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 275
Target Start/End: Complemental strand, 179447 - 179176
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
|||||||| ||| |||| || || |||||||| || || |||||||| ||||||||||| ||||| || |||||||| |||||||| || |||||| | |
|
|
| T |
179447 |
atggttaaaaaatcagccacagaaagaatctcccctcctttgtcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcgaatttctcca |
179348 |
T |
|
| Q |
105 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
203 |
Q |
| |
|
|||||||| || |||| |||||||| |||||||| || | | | || || || ||||||| | |||| |||||||| | |||||||| || |
|
|
| T |
179347 |
agtctgacccaagcttcgatatagtgtgcaatgtggtctcagtgttgcctgttgagtatgacgttccttcagaagttaacgaagtagaaagtgactttac |
179248 |
T |
|
| Q |
204 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
275 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||||| || || |||||||||| ||||| |||||||| |
|
|
| T |
179247 |
cgacgaaatgattatccacaagccactatgctattatgttataaacaatggttgtgtcgaagatcaacatgc |
179176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 23435138 - 23435434
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
23435138 |
cgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttc |
23435237 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
23435238 |
acgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcttactggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatt |
23435337 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacac |
296 |
Q |
| |
|
||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23435338 |
tcgtcgatgaaatggtaactcacaattctctatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagacac |
23435434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 19035339 - 19035041
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||||||||| | ||||||||||| ||||||||| || ||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
19035339 |
cgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattttgaagaaaaataatcccaaaaaggatgaagaaatgacttcgaatttc |
19035240 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||| ||||| || || | || |||||||| || ||||||| |||||||||||||| |||| ||||||||| ||| | |||||||| | |
|
|
| T |
19035239 |
actggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacctgtggaatacgacgtgcagtcagaaattaatgaagttgaaagtgact |
19035140 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19035139 |
tcgtcgatgaaatggcaattcacaagccattatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaaccagatactt |
19035041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 11394 - 11692
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
11394 |
cgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattttaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttc |
11493 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||| |||||||||||||||| ||||||| || ||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
11494 |
actgaatctgaccctagtctcaacatagtatgcaatgtggtttctatcctacctatggaatatgacgttcagtcagaaattaacgaagttgaaagtgatt |
11593 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11594 |
tcgtcgatgaaatggcaattaacaagccactatgctattatgtcatgaataatagttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
11692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 13289528 - 13289230
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| || |||||||| |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
13289528 |
cgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattttaaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttc |
13289429 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||| ||||||||| ||||||| |||||||| | ||||||||||||| | |||||||||| |
|
|
| T |
13289428 |
actggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacctttggaatatgacgttcattcagaaattaacgaagttgaaagtgatt |
13289329 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13289328 |
tcgtcgatgaaatgtcaattcacaagccactatgctattatgtcatgaataacggttgtgtagaagagcaacatgcagtctttgaaaaaccagacactt |
13289230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 14772728 - 14772434
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
14772728 |
cgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttc |
14772629 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||| |||||||| ||||| || |||||||| || ||||||| ||||||||||||||||||| |||| |||| ||| | |||||||| | |
|
|
| T |
14772628 |
actggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgact |
14772529 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagac |
294 |
Q |
| |
|
||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |
|
|
| T |
14772528 |
tcgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgttgtctttgaaaaaccagac |
14772434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 272
Target Start/End: Complemental strand, 18562670 - 18562450
Alignment:
| Q |
53 |
ttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctac |
151 |
Q |
| |
|
||||||||||||| ||| ||||| ||||| |||||||| ||||| || ||| ||||||||| |||||||||||| | || ||||| || || | |||| |
|
|
| T |
18562670 |
ttgaagaaagatcctccaaaggaagatgaagaaatgacgtcaaacttttctgaatctgacccgagtctcgacataatatgcaatgtcgtgtcagtgctac |
18562571 |
T |
|
| Q |
152 |
tggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataa |
251 |
Q |
| |
|
| || |||||||| |||| | || | || ||| |||||||||| ||| | ||||||||||| ||||| |||||| ||||||| ||||| |||||||| |
|
|
| T |
18562570 |
tagtcgaatacgatgttccttcggaggtcaatgaagtggaaagtgacttcattgatgaaatggctattcataagccattatgctactatgttatgaataa |
18562471 |
T |
|
| Q |
252 |
tggttgtgaggaagagcaaca |
272 |
Q |
| |
|
|||||||| ||||| ||||| |
|
|
| T |
18562470 |
tggttgtgtcgaagatcaaca |
18562450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 9673 - 9971
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| || |||||||| ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||||| |
|
|
| T |
9673 |
cgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattttaaagaaagaacatcccaaagaggatgaagaaatgacttcaaatttc |
9772 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||| | ||||||||||||| | |||||||||| |
|
|
| T |
9773 |
actggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacctgtggaatacgacgttcaatcagaaattaacgaagttgaaagtgatt |
9872 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9873 |
tcgtcgacgaaatggcaattcacaagccactatgttattatgtcatgaataacggttgcgtagaagagcaacatgcagtctttgaaaaaccagatactt |
9971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 17423015 - 17422717
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
17423015 |
cgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatcttgaagaaagatcatcccaaagaggatgaggagatgacttcgaatttc |
17422916 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| ||||||||||| || ||||||||||| || ||||||||| ||||||||| ||||||||||| || |||| |||||||||| || |||||||||||| |
|
|
| T |
17422915 |
acgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacctgtggaatacgatgtccagtcagaaattaacaaagtggaaagtgatt |
17422816 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
17422815 |
tcgtcgatgaaatggcaacccacaagccactatgctcttatgtcatgaataatggttgtgtagaagagcaacatgcagtcttcgaaaaaccagaaactt |
17422717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 22348925 - 22348627
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
22348925 |
cgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttc |
22348826 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
| |||||||||||| ||||| || || || || ||||||||| | ||||||| ||| ||||||||||||||| |||| |||| ||| | |||||||| | |
|
|
| T |
22348825 |
attggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacctgtgaaatacgacgttcagtcagaagttaatgaagttgaaagtgact |
22348726 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| || || |||||||| ||||||||||||||||| |||| |
|
|
| T |
22348725 |
tcgtcgacgaaatggcaactcacaagccactatgctattatgttatgaataatggttgtgtagaggaacaacatgctgtctttgaaaaaccagatactt |
22348627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 275
Target Start/End: Original strand, 1735335 - 1735606
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
||||||||||| |||||||| || |||| || |||||||||||||| |||||||||||||| | || || || ||||| ||||||||||||||||| | |
|
|
| T |
1735335 |
atggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggagatgacttcaaatttcacgg |
1735434 |
T |
|
| Q |
105 |
gatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
203 |
Q |
| |
|
||||||||| ||||| |||||||| || ||||||||| | ||| | | ||||||||||| || |||| ||| ||||| ||| | |||||||| ||||| |
|
|
| T |
1735435 |
aatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtggaatacgatgtccagtcagatattaatgaagtcgaaagtgacttcgt |
1735534 |
T |
|
| Q |
204 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
275 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
1735535 |
cgatgagatggcaactcacaaaccactatgctattatgtcatgaataatggctgtgtggaagaacaacatgc |
1735606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 302
Target Start/End: Original strand, 22067798 - 22068097
Alignment:
| Q |
3 |
aaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcac |
102 |
Q |
| |
|
|||||||||| || ||||| | ||| |||||||| || || || ||||| ||||||| || |||||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
22067798 |
aaatggttaaaaagccagccatggaaagaatctcccctcccttatcaattttgaagagaggtcatcctaaggaggatgaagaaatgacttcgaatttcac |
22067897 |
T |
|
| Q |
103 |
tggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttc |
201 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||||| || | | | ||||||||||||||||||| ||| |||| ||| | |||||||| ||| |
|
|
| T |
22067898 |
tggatctgaccc-agtctcgatatagtgtgcaatgtggtgtcagtttttcctgtggaatacgacgttcagtcggaagttaatgaagttgaaagtgacttc |
22067996 |
T |
|
| Q |
202 |
gtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactttga |
301 |
Q |
| |
|
|||| ||||||| || || |||||| ||||||||||||||||||| ||||| |||| |||||||| ||||| || ||||||| |||||| |||||| |
|
|
| T |
22067997 |
atcgacaaaatggccatccataagccattatgctattatgtcatgaacaatggctgtgttgaagagcagcatgccgtttttgaaagaccagatgctttga |
22068096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 10150821 - 10151119
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
10150821 |
cgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttc |
10150920 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||| ||||| |||||||| || ||||||||| |||| |||| |||||||| ||||||| || ||||||||| ||| | |||||||||| |
|
|
| T |
10150921 |
actggatctgaccccagtcttgacatagtatgcaatgtggtttctatactacctgtggaatatgacgttccgtcagaaattaatgaagttgaaagtgatt |
10151020 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10151021 |
tcatcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaatcagacactt |
10151119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13307037 - 13306797
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| || |||||||| |||||| |
|
|
| T |
13307037 |
cgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagaggatgaagatatgacttcgaatttc |
13306938 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| |||||||||||||||||||| ||||| || ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| | |||||||||| |
|
|
| T |
13306937 |
acgggatctgaccctagtctcgatatagtttgcaatgtggtttctatcctaccggtggaatacgatgttcagttagaaattaacgaagttgaaagtgatt |
13306838 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattat |
240 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
13306837 |
tcgtcgatgaaatggcaactcacaagccactgtgctattat |
13306797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 14693387 - 14693094
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||| |
|
|
| T |
14693387 |
cgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatcttgaagaaagaccattccaaagaggataaggagatgacttcaaatttc |
14693288 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| | ||||||||| | ||||||||||| || ||||||| ||||||| | | ||||||||||| || |||| ||||||||| ||| | |||| ||| | |
|
|
| T |
14693287 |
acggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcctgtggaatacgatgtccagtcagaaattaatgaagttgaaattgact |
14693188 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| || || || |||||||| |
|
|
| T |
14693187 |
tcgtcgatgaaatggaaactcacaagccactatgctattatgtcatgaataatggctgtgtggaagaacaacatgcggttttcgagaaaccaga |
14693094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 7402147 - 7401854
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
||||||||||||||| ||||||| || ||||| || |||||||||||||| |||||||| || | |||| ||||||||||| ||||||||||||||| |
|
|
| T |
7402147 |
cgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtattgttccaaagaggatgaggagatgacttcaaatttc |
7402048 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| | || |||||| |||||||||||||| || ||||||||| | ||||| | | ||||||||| || |||| ||| ||||| ||| |||||||||| | |
|
|
| T |
7402047 |
acggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctgaggaatacgatgtccagtcagagattaatgaagtggaaagtgact |
7401948 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| |||||||| || ||||| || ||||| |
|
|
| T |
7401947 |
ttgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggctgcgtggaagaacaacatgcggtttttgagaagccaga |
7401854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 275
Target Start/End: Original strand, 10782194 - 10782465
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
||||||||||| |||||||| ||| |||| |||||||||||||| || ||| |||||||||||| || || ||||||||||||||||| |||||||| | |
|
|
| T |
10782194 |
atggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaagatgaggaaatgacttcgaatttcacag |
10782293 |
T |
|
| Q |
105 |
gatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
203 |
Q |
| |
|
||||||||| ||||| |||||||| || ||||||| ||| || | | |||||||| || || |||| ||||||||| ||| ||||||||||| || |
|
|
| T |
10782294 |
aatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtggaatatgatgtccagtcagaaattaatgaagccgaaagtgattttgt |
10782393 |
T |
|
| Q |
204 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgc |
275 |
Q |
| |
|
|||||| ||||||| |||||| ||||| |||||||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
10782394 |
cgatgagatggcaactcacaaaccactgtgctattatgtcatgaataatgactgtgtggaagaacaacatgc |
10782465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 7365426 - 7365311
Alignment:
| Q |
178 |
attaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcag |
277 |
Q |
| |
|
||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| |||||||| | |
|
|
| T |
7365426 |
attaatgaagtggaaagtgactttgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggctgcgtggaagaacaacatgcgg |
7365327 |
T |
|
| Q |
278 |
tctttgaaaaaccaga |
293 |
Q |
| |
|
| ||||| || ||||| |
|
|
| T |
7365326 |
tttttgagaagccaga |
7365311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 21511023 - 21511321
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21511023 |
cgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaggaggatgaagaaatgacttcaaatttc |
21511122 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||| ||||| || || | || |||||||| || ||| |||| |||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
21511123 |
actggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttacttgtggaatacgacgttcagttggaagttaacgaagtggaaagtgatt |
21511222 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
| ||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
21511223 |
ttgtcgacgaaatggcaactcacaagccactatgctattacgtcgtgaataatggttgtgtagaagaacaacatgccgtctttgaaaaaccagacactt |
21511321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 29655 - 29953
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| |||||||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||| |||||||| ||| ||||| |
|
|
| T |
29655 |
cgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattttgaagaaagatcatcccaaagaggatgaagaaatgacctcagatttc |
29754 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggtt-ctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| ||||||||||| || || |||||||| || ||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||| | |||||||||| |
|
|
| T |
29755 |
accggatctgaccccagcctagacatagtatgcaatgtggtttctatcctaccagtggaatacgacgttcagtcagaaattaatgaagttgaaagtgatt |
29854 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
29855 |
tcgtcgatgaaatggaaattcacaagccactatgctattatgtcatgaataatggttatgtagaagagcatcatgcagtcttagaaaaaccagacactt |
29953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 37754 - 37456
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| || |||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||||||||| || |||||||| |||||| |
|
|
| T |
37754 |
cgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttgaagaaagactttcccaaggaggatgaagatatgacttcgaatttc |
37655 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||| || || ||||| |||||||||| |||||||| |||||||| | ||||||||||||| | |||||||||| |
|
|
| T |
37654 |
actggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgtggaatatgacgttcaatcagaaattaacgaagtcgaaagtgatt |
37555 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||| |||||||| | |||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37554 |
tcgtcgacgaaatggctactcacaaaccactatgttattatgtcatgaataatggatgtgtggaagagcaacatgcagtatttgaaaaaccagacactt |
37456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 26241 - 26539
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||| || |||||||||||| || |||||||| |||||| |
|
|
| T |
26241 |
cgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattttgaagaaagactctctcaaggaggatgaagagatgacttcgaatttc |
26340 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||| || || ||||| || ||||||| |||||||| |||||||| | ||||||||||||| | |||||||||| |
|
|
| T |
26341 |
actggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctacctgtggaatatgacgttcaatcagaaattaacgaagtcgaaagtgatt |
26440 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||| ||||||| || |||||| |||||||| ||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26441 |
tcgtcgacgaaatggaaactcacaaaccactatgttattatgtcatgaataacggatgtgtggaagagcaacatgcagtatttgaaaaaccagacactt |
26539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 294
Target Start/End: Complemental strand, 5698 - 5405
Alignment:
| Q |
2 |
gaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttca |
101 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
5698 |
gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca |
5599 |
T |
|
| Q |
102 |
ctggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgattt |
200 |
Q |
| |
|
||||||||||||| |||||||| ||||| || |||||||| || || |||| ||||||||||||||||||| |||| |||| ||| | |||||||| || |
|
|
| T |
5598 |
ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaattctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgactt |
5499 |
T |
|
| Q |
201 |
cgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagac |
294 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
5498 |
cgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctttgaaaaaccagac |
5405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 294
Target Start/End: Original strand, 67003 - 67296
Alignment:
| Q |
2 |
gaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttca |
101 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
67003 |
gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca |
67102 |
T |
|
| Q |
102 |
ctggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgattt |
200 |
Q |
| |
|
||||||||||||| |||||||| ||||| || |||||||| || ||||||| ||||||||||||||||||| |||| |||| ||| | |||||||| || |
|
|
| T |
67103 |
ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgactt |
67202 |
T |
|
| Q |
201 |
cgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagac |
294 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |
|
|
| T |
67203 |
cgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgttgtctttgaaaaaccagac |
67296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 11507 - 11805
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
11507 |
cgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattataaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttc |
11606 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|||||||||||||| ||||| || || || || |||||||| || ||||||| ||||||||||||||||||| ||| |||| ||| | |||||||| | |
|
|
| T |
11607 |
actggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacctgtggaatacgacgttcagtcggaagttaatgaagttgaaagtgact |
11706 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
11707 |
tcgttgacgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaagaacaacatgctgtgtttgaaaaaccagatactt |
11805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5074 - 5367
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
5074 |
cgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaaggaggatgaagaaatgacttcgaatttc |
5173 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||||||| |||||||||||||| || |||||||| || || |||| |||||||||||||||| || |||| |||| ||| | |||||||| | |
|
|
| T |
5174 |
actggatctgacctcagtctcgacatagtatgcaatgtggtatcaattctacctgtggaatacgacgttctgtcagaagttaatgaagttgaaagtgact |
5273 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
|||| || |||||||| | || ||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |
|
|
| T |
5274 |
tcgttgacgaaatggctacgcataagccactatgttattatgtcatgaataatggttgtgtggaagaacaacatgctgtctttgaaaaaccaga |
5367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 2 - 281
Target Start/End: Complemental strand, 22805998 - 22805718
Alignment:
| Q |
2 |
gaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttca |
101 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
22805998 |
gaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca |
22805899 |
T |
|
| Q |
102 |
ctggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgattt |
200 |
Q |
| |
|
||||||||||||| | |||||| ||||| || |||||||| || ||||||| ||||||||||||||||||| |||| |||| ||| | |||||||| | |
|
|
| T |
22805898 |
ctggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacat |
22805799 |
T |
|
| Q |
201 |
cgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctt |
281 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||| |
|
|
| T |
22805798 |
cgtcgacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctt |
22805718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 41380405 - 41380266
Alignment:
| Q |
154 |
gtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatg |
253 |
Q |
| |
|
||||||||||| || |||| | ||||||| ||| | |||||||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
41380405 |
gtggaatacgatgtccagtcaaaaattaatgaagtcgaaagtgacttcgtcgatgagatggcaactcacaaaccactgtgctattatgtcatgaataatg |
41380306 |
T |
|
| Q |
254 |
gttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
| |||| |||||| |||||||| || || ||||| ||||| |
|
|
| T |
41380305 |
gctgtgtggaagaacaacatgcggttttcgaaaagccaga |
41380266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 41380480 - 41380418
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcat |
67 |
Q |
| |
|
||||||||||| |||||||| ||| |||| || |||||||||||||| ||||||||||||||| |
|
|
| T |
41380480 |
atggttaagaagccagcaacagagcgaatttcacccccattgtcaattttgaagaaagatcat |
41380418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 22508100 - 22508072
Alignment:
| Q |
76 |
ggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22508100 |
ggatgaggaaatgacttcaaatttcactg |
22508072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 139134 - 138836
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| |||| ||||| || || ||||||||||| |||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
139134 |
cgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatcttaaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttc |
139035 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtgg-ttctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||| ||| ||||||| || |||||||||||||||| |||| |||| ||| | |||||||| | |
|
|
| T |
139034 |
actgggtctgaccctagtctcgacatagtatgcaatgtggtttcaatcctacctgtagaatacgacgttcagtcagaagttaatgaagttgaaagtgact |
138935 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||||| |||||||| | |||||||||||||| |||||||||||||||||| |||||| ||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
138934 |
tcgtcgacgaaatggcgacacacaagccactatgttattatgtcatgaataatagttgtgtagaagaacaacatgctgtctttgaaaagccagacactt |
138836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 126921 - 126623
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| |||||| |||| ||||||||||| |||||||||| ||| || ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
126921 |
cgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattttaaagaaagatcatcccaatgaggatgaagaaatgacttcaaatttc |
126822 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
|| ||||||||||| ||||| || || || || |||||||| || ||||||| ||||||||||||||| ||| ||| |||||||| | |||||||| | |
|
|
| T |
126821 |
acgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacctgtggaatacgacgtttagtcggaagttaacgaagttgaaagtgact |
126722 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
|| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || |||||||||||||| |||| |
|
|
| T |
126721 |
tcatcgacgaaatggcaactcacaagccactatgctattatgtcatgaataatggttgtgtagaagaacaacacgccgtatttgaaaaaccagatactt |
126623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 14473 - 14766
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| |||||||| ||||| |||||||| || || || ||||| ||||||| ||||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
14473 |
cgaaatggttaaaaaaccagccacggaaagaatctcccctcccttatcaattttgaagagagatcatcctaaggaggatgaagaaatgacttcgaatttc |
14572 |
T |
|
| Q |
101 |
actggatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatt |
199 |
Q |
| |
|
||||||||| |||| |||||||| ||| | || ||||| || || | | | ||||||||||||||||||| |||| |||| ||| | |||||||| | |
|
|
| T |
14573 |
actggatctaaccccagtctcgatataatatgcaatgtcgtgtcagttttgcctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgact |
14672 |
T |
|
| Q |
200 |
tcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
|| |||| |||||||| | || |||||| ||||||||||||||||||| ||||| |||| || || |||||||| |||||||||| |||||| |
|
|
| T |
14673 |
tcatcgacgaaatggccacccataagccattatgctattatgtcatgaacaatggctgtgttgaggaacaacatgctgtctttgaaagaccaga |
14766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 155 - 298
Target Start/End: Original strand, 69632 - 69775
Alignment:
| Q |
155 |
tggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatgg |
254 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| | | ||||||||||||||||||||| |
|
|
| T |
69632 |
tggaatacgatgttcagtcagaaattaacgaagtggaaagtgatttcgtcgatgaaatggcaactcacaagccattgtactattatgtcatgaataatgg |
69731 |
T |
|
| Q |
255 |
ttgtgaggaagagcaacatgcagtctttgaaaaaccagacactt |
298 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
69732 |
ttgtgtagaagagcaacatccagtcttcgaaaaaccagatactt |
69775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 47 - 293
Target Start/End: Original strand, 33627 - 33874
Alignment:
| Q |
47 |
tcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt-tcta |
145 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
33627 |
tcaatcttgaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtgcaatgtggtgtcag |
33726 |
T |
|
| Q |
146 |
tcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcat |
245 |
Q |
| |
|
| | | ||||||||||| ||||||| || |||| ||| | |||||||| ||| ||| |||||||| | || |||||| |||||||||||||||| |
|
|
| T |
33727 |
ttttgcctgtggaatacgatgttcagtcgaaagttaatgaagttgaaagtgacttcaccgacgaaatggcgacacataagccattatgctattatgtcat |
33826 |
T |
|
| Q |
246 |
gaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
||| ||||| |||| ||||| |||||||| || |||||| ||||||| |
|
|
| T |
33827 |
gaacaatggctgtgttgaagaacaacatgctgtttttgaataaccaga |
33874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 159225 - 159086
Alignment:
| Q |
2 |
gaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttca |
101 |
Q |
| |
|
||||||||||| || |||||||| || |||||||| || || || ||||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
159225 |
gaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatcttgaagaaaaaccatcccaaggaggatgaagaaatgacttcgaatttca |
159126 |
T |
|
| Q |
102 |
ctggatctgaccctagtctcgacatagtgtggaatgtggt |
141 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
159125 |
ctggatctgaccctagtctcgacatagtatgcaatgtggt |
159086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 156555 - 156416
Alignment:
| Q |
154 |
gtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatg |
253 |
Q |
| |
|
||||||||| ||||||||| |||| |||| ||| | |||||||| ||||| |||||||||| | || ||||||||||| |||||||| ||||| |||| |
|
|
| T |
156555 |
gtggaatacaacgttcagtcagaagttaatgaagttgaaagtgacttcgttgatgaaatggtgacgcataagccactatgttattatgttatgaacaatg |
156456 |
T |
|
| Q |
254 |
gttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
|||||| ||||| ||||||| || |||||||| ||||| |
|
|
| T |
156455 |
gttgtgttgaagaacaacatgttgtttttgaaaagccaga |
156416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 106 - 293
Target Start/End: Original strand, 4273 - 4461
Alignment:
| Q |
106 |
atctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgtc |
204 |
Q |
| |
|
||||||||| |||||||||||||| || |||| ||| || ||||||| ||||||||||| ||||| | |||| |||| ||| | |||||||| ||||| |
|
|
| T |
4273 |
atctgaccccagtctcgacatagtatgcaatgcggtatcaatcctacatgtggaatacgaagttcaatcagaagttaatgaagttgaaagtgacttcgtt |
4372 |
T |
|
| Q |
205 |
gatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttgaaaaaccaga |
293 |
Q |
| |
|
|| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||| |
|
|
| T |
4373 |
gacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctttgaaaagccaga |
4461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1891 - 2001
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
1891 |
cgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaagtaggatgaagaaatgacttcgaatttc |
1990 |
T |
|
| Q |
101 |
actggatctga |
111 |
Q |
| |
|
||||| ||||| |
|
|
| T |
1991 |
actgggtctga |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 75405 - 75660
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||| | |
|
|
| T |
75405 |
atggttaaaaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcaaatttcacag |
75504 |
T |
|
| Q |
105 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
203 |
Q |
| |
|
||||||| | |||||||| ||||| || |||||||| || | | | | ||||| ||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
75505 |
aatctgactcaagtctcgatatagtatgcaatgtggtatcagtattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttac |
75604 |
T |
|
| Q |
204 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
259 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
75605 |
cgatgaaatggctatccataagccactatgctattatgttatgaacaatggttgtg |
75660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 83834 - 84089
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||||| ||| | || |||||||| ||||||| ||||||||||| | |
|
|
| T |
83834 |
atggttataaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacag |
83933 |
T |
|
| Q |
105 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
203 |
Q |
| |
|
||||||||| |||||||| ||||| || |||||||| || | | | | ||||| ||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
83934 |
aatctgacccaagtctcgatatagtatgcaatgtggtatcagtattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttac |
84033 |
T |
|
| Q |
204 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
259 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
84034 |
cgatgaaatggctatccataagccactatgctattatgttatgaacaatggttgtg |
84089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 121506 - 121761
Alignment:
| Q |
5 |
atggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactg |
104 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||||| ||| | || |||||||| ||||||| ||||||||||| | |
|
|
| T |
121506 |
atggttataaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacag |
121605 |
T |
|
| Q |
105 |
gatctgaccctagtctcgacatagtgtggaatgtggt-tctatcctactggtggaatacgacgttcagttagaaattaacgaaatggaaagtgatttcgt |
203 |
Q |
| |
|
||||||||| |||||||| ||||| || |||||||| || | | | | ||||| ||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
121606 |
aatctgacccaagtctcgatatagtatgcaatgtggtatcagtattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttac |
121705 |
T |
|
| Q |
204 |
cgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
259 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
121706 |
cgatgaaatggctatccataagccactatgctattatgttatgaacaatggttgtg |
121761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 148936 - 149016
Alignment:
| Q |
179 |
ttaacgaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtg |
259 |
Q |
| |
|
|||||||| | ||||||||||| |||||||||||| || || |||||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
148936 |
ttaacgaagtagaaagtgattttaccgatgaaatggctatccataagccattatgctattatgttatgaacaatggttgtg |
149016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 65285 - 65376
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgactt |
92 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
65285 |
cgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaagaaatgactt |
65376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 74463 - 74554
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgactt |
92 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
74463 |
cgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaagaaatgactt |
74554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 42379 - 42285
Alignment:
| Q |
47 |
tcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacatagtgtggaatgtggt |
141 |
Q |
| |
|
||||| ||||||||| ||||||| ||||||||||| |||||||| || |||||||||| |||||| || |||||||| |||||||| |||||||| |
|
|
| T |
42379 |
tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggt |
42285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 48987 - 48913
Alignment:
| Q |
53 |
ttgaagaaagatcatcccaaggaggatgaggaaatgacttcaaatttcactggatctgaccctagtctcgacata |
127 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| || || ||| ||| ||||||||| |||||||||||| |
|
|
| T |
48987 |
ttgaagaaagatcatccaaaggaggatgaagaaatgacgtcgaacttctctgaatctgacccaagtctcgacata |
48913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 127110 - 127000
Alignment:
| Q |
184 |
gaaatggaaagtgatttcgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggttgtgaggaagagcaacatgcagtctttg |
283 |
Q |
| |
|
||||| |||||||||||| ||||||||||| ||||| |||||| ||||||||||||| |||||||||||| ||| ||||| ||||| || || || | |
|
|
| T |
127110 |
gaaatagaaagtgatttcactgatgaaatggcgattcataagccattatgctattatgttatgaataatggtggtgttgaagatcaacacgccgtattcg |
127011 |
T |
|
| Q |
284 |
aaaaaccagac |
294 |
Q |
| |
|
||| ||||||| |
|
|
| T |
127010 |
aaagaccagac |
127000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0423 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0423
Description:
Target: scaffold0423; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5136 - 5228
Alignment:
| Q |
1 |
cgaaatggttaagaaaccagcaacggagagaatctcgcccccattgtcaatcttgaagaaagatcatcccaaggaggatgaggaaatgacttc |
93 |
Q |
| |
|
|||||||||||| || | |||| |||| |||||||| || || || ||||||| |||||||| |||||||| | |||||| ||||||||||| |
|
|
| T |
5136 |
cgaaatggttaaaaagctagcagcggaaagaatctcacctcccttatcaatctctaagaaagaccatcccaaagtggatgaagaaatgacttc |
5228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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