View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8663_low_13 (Length: 286)
Name: NF8663_low_13
Description: NF8663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8663_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 38 - 268
Target Start/End: Original strand, 21898119 - 21898361
Alignment:
| Q |
38 |
aaaaggttcacgggatacgtgtgtagatagggtggaggggaatgg------------agaatggagaggttgaaagagggaagggaggtccatgccttgg |
125 |
Q |
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| T |
21898119 |
aaaaggttcacgagatatgtgtgtagatagggtggaggggaatggagattgtgatggagaatggagaggttgaaagagggaagggaggtccatgccttgg |
21898218 |
T |
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| Q |
126 |
aagtattaccatgtaaagtggtgttggattagtttgagtacaattttgtgggtgttttaccttttcgtattgaactgaaagtgttgcacacttcaatctt |
225 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| |
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| T |
21898219 |
aagtattaccatgtaaagtggtgttggattagttggagtacaattttgtgggtgttttagctattcgtattgaactgaaagtgttgcagacttcaatctt |
21898318 |
T |
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| Q |
226 |
tatggagggttggaatggcatcaaggtgtatgctatgggggtc |
268 |
Q |
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| T |
21898319 |
tatggagggttggaatggcatcaagatgtatgccatgggggtc |
21898361 |
T |
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