View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8663_low_14 (Length: 276)
Name: NF8663_low_14
Description: NF8663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8663_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 20 - 265
Target Start/End: Original strand, 1861236 - 1861481
Alignment:
| Q |
20 |
tatctacattatgttatcgatctcttaggttttgaatttcatatatgctgttctttcttccgcttgaagaaatcatcgtgtatggaccgaattattatta |
119 |
Q |
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| T |
1861236 |
tatctacattatgttatcgatctcttaggttttgaatttcatatatgctgttctttcttccgcttgaagaaatcatcgtgtatggaccgaattattatta |
1861335 |
T |
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| Q |
120 |
aataataaactccaatatattatgttatatatgcattgattaattttcctactggtaatgtcatctagccaattgtttgatttggaatttgatctggtaa |
219 |
Q |
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| T |
1861336 |
aataataaactccaatatattatgttatatatgcattgattaattttcctactggtaatgtcatctagccaattgtttgatttggaatttgatctggtaa |
1861435 |
T |
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| Q |
220 |
tcatttgtttgctgaatgctaatagttttgttttttcacaagtatt |
265 |
Q |
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| T |
1861436 |
tcatttgtttgctgaatgctaatagttttgttttttcacaagtatt |
1861481 |
T |
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