View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8663_low_5 (Length: 348)
Name: NF8663_low_5
Description: NF8663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8663_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 14 - 332
Target Start/End: Original strand, 45783355 - 45783673
Alignment:
| Q |
14 |
gacatcaacggcacacaccccacccccaaaaaacctaaactctcttcttcttccaatttcatcaccgcttcagaaattcaatctgaattcagtcaccacg |
113 |
Q |
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| T |
45783355 |
gacatcaacggcacacaccccacccccaaaaaacctaaactctcttcttcttccaatttcatcaccgcttcagaaattcaatctgaattcagccaccacg |
45783454 |
T |
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| Q |
114 |
actccgccgtctctcgcatcaacaacggcagcttcggctcctgtccttcctccatcctttctgctcaacagcaatggcagctcaagtatcttcgtcaacc |
213 |
Q |
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| T |
45783455 |
actccgccgtctctcgcatcaacaacggcagcttcggctcctgtccttcctccatcctctccgctcaacaacaatggcagctcaagtatcttcgtcaacc |
45783554 |
T |
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| Q |
214 |
cgatcacttctacttcaaccacctcaaacccgccatcaacaactcccgctccattatccaaaacctagtcaacgctaaagacatcaacgaaatctctatc |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45783555 |
cgatcacttctacttcaaccacctcaaacccgccatcaacaactcccgctccattatccaaaacctagtcaacgctaaagacatcaacgaaatctctatc |
45783654 |
T |
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| Q |
314 |
gtcgataacgccaccaccg |
332 |
Q |
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||||||||||||||||||| |
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| T |
45783655 |
gtcgataacgccaccaccg |
45783673 |
T |
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