View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8665_low_11 (Length: 205)
Name: NF8665_low_11
Description: NF8665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8665_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 26926339 - 26926491
Alignment:
| Q |
25 |
aattgtcattgcgcacccaaacaataataactcagttttctttaatttaagactattttacctaaaaagttcgaacatcagagcgaaaatgtaccaatag |
124 |
Q |
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| T |
26926339 |
aattgtcattgcgcacccaaacaataataactcagttttctttaatttga----------cctaaaaagttcgaacatcagagtaaaaatggaccaatag |
26926428 |
T |
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| Q |
125 |
atttgcttgttcttatataaattaaactattctttctgacatattacacatgacaacaatatt |
187 |
Q |
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| T |
26926429 |
atttgtttgttcttatataaattaaactattctttctgacatattacacatgacaacaatatt |
26926491 |
T |
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