View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8667_high_2 (Length: 426)
Name: NF8667_high_2
Description: NF8667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8667_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 19 - 369
Target Start/End: Original strand, 17892144 - 17892496
Alignment:
| Q |
19 |
catatccagtcatgcatttaccttccaatccactacttccctctgcctctcttttgaaaatgaataaagaatcattcaaggactaaaacacatatattaa |
118 |
Q |
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| T |
17892144 |
catatccattcatgcatttaccttccaatccactatttccctctgcctctcttttgaaaatgaataaagaatcattcaaggactaaaacacatatattaa |
17892243 |
T |
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| Q |
119 |
acatcattccaattgaaactatttatttaaaagaataataaatattcatccattaatgtaaaacatcagtatgaaaatattgaatcttgcgataaataag |
218 |
Q |
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| T |
17892244 |
acatcattccaattgaaactatttatttaaaaaaataataaatattcatccattaatgtaaaacatcagtatgaaaatatttaatcttgcgataaataag |
17892343 |
T |
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| Q |
219 |
ttcaaattataaagtataattcaactatgttatttgtaaaaggaataatttttgtgaccctatggtaaaaataatttcactcattctcagattaacctaa |
318 |
Q |
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| T |
17892344 |
ttcaaattataaagtataatttaactatgttgtttgtaaaaggaataatttttgtgaccctatggtaaaaataatttcactcatcctcagattaacctaa |
17892443 |
T |
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| Q |
319 |
gtgatcatcctctagtaa--atattcatattgcctttggagaaatgatcctct |
369 |
Q |
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| T |
17892444 |
gtgatcatcctctaataaatatattcatattgcctttggagaaatgatcctct |
17892496 |
T |
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