View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8667_high_4 (Length: 349)

Name: NF8667_high_4
Description: NF8667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8667_high_4
NF8667_high_4
[»] chr1 (6 HSPs)
chr1 (18-349)||(31239964-31240295)
chr1 (290-346)||(31240574-31240630)
chr1 (98-255)||(31240143-31240300)
chr1 (170-282)||(31240553-31240665)
chr1 (193-288)||(31240451-31240545)
chr1 (145-215)||(31240501-31240571)
[»] chr8 (22 HSPs)
chr8 (175-349)||(35419025-35419199)
chr8 (119-237)||(35423292-35423410)
chr8 (98-255)||(35419020-35419177)
chr8 (170-332)||(35422996-35423158)
chr8 (188-270)||(35418810-35418892)
chr8 (18-64)||(35423383-35423429)
chr8 (135-216)||(35418660-35418741)
chr8 (175-264)||(35418894-35418983)
chr8 (168-332)||(35423122-35423286)
chr8 (97-281)||(35418694-35418884)
chr8 (164-228)||(35418957-35419021)
chr8 (80-228)||(35423001-35423149)
chr8 (169-216)||(35418633-35418680)
chr8 (302-349)||(35418830-35418877)
chr8 (170-257)||(35422945-35423032)
chr8 (97-169)||(35418890-35418962)
chr8 (80-228)||(35423127-35423275)
chr8 (302-349)||(35418908-35418955)
chr8 (202-316)||(35423312-35423426)
chr8 (302-347)||(35423380-35423425)
chr8 (164-228)||(35419173-35419236)
chr8 (223-255)||(35419235-35419267)


Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 18 - 349
Target Start/End: Original strand, 31239964 - 31240295
Alignment:
Q  18 agaatcatcttctaactcctctagctaatcatcattttgttgatcataattcagaataatcatctttcaattcctttgaaaaatcattacctttcaattc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31239964 agaatcatcttctaactcctctagctaatcatcattttgttgatcataattcagaataatcatctttcaattcctttgaaaaatcattatctttcaattc 31240063  T
Q  118 atctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaattcc 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31240064 atctagcaaatacttattttgttgattattataactatgaggatattgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaattct 31240163  T
Q  218 gctaccaaatccatattttgttgataattataattatgaggatactgttcaaaatgatattcttcaagttcttgtaacaactcgtcatcttccaattcct 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  || |  |||||||||| ||  |    
T  31240164 gctaccaaatccatattttgttgataattataattatgaggatactgtttaaaatgatattcttccagttcttgtagaaaataatcatcttccatttgat 31240263  T
Q  318 ctagcaaatcctcattttgctgatcattataa 349  Q
    ||||||||| | |||||||  |||||||||||    
T  31240264 ctagcaaattcacattttgtggatcattataa 31240295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 31240574 - 31240630
Alignment:
Q  290 tgtaacaactcgtcatcttccaattcctctagcaaatcctcattttgctgatcatta 346  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31240574 tgtagcaactcgtcatcttccaattcctctagcaaatcctcattttgctgatcatta 31240630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 31240143 - 31240300
Alignment:
Q  98 aaatcattacctttcaattcatctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatcttcttccaattcatttagca 197  Q
    ||||||| | ||| ||||||  ||| ||||| | |||||||||||| ||||||| |||||||||| || | |||||||| |||||||| ||| | ||| |    
T  31240143 aaatcatcatcttccaattctgctaccaaatccatattttgttgataattataattatgaggatactgtttaaaatgatattcttccagttcttgtagaa 31240242  T
Q  198 aatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatg 255  Q
    ||| ||||||||||| ||   ||| ||||| || ||||||| ||| ||||||||||||    
T  31240243 aataatcatcttccatttgatctagcaaattcacattttgtggatcattataattatg 31240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 31240553 - 31240665
Alignment:
Q  170 aaatgatcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaa 269  Q
    |||| ||||||||||||||  | |||||| || ||||||||||||||| ||| |||||||  |||||| |||| |||| |||| ||| |||  || ||||    
T  31240553 aaatcatcttcttccaatttctgtagcaactcgtcatcttccaattcctctagcaaatcctcattttgctgatcattaaaattgtgatgatgttgctcaa 31240652  T
Q  270 aatgatattcttc 282  Q
    || || |||||||    
T  31240653 aaggacattcttc 31240665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 31240451 - 31240545
Alignment:
Q  193 tagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaaaatgatattcttcaagttc 288  Q
    |||||||||| ||||||||||||   ||| |||||||| | ||| || || ||||||||||| ||||||||| ||||||| || |||||| |||||    
T  31240451 tagcaaatcaccatcttccaattgatctagcaaatccacactttttt-atcattataattataaggatactgctcaaaataatcttcttctagttc 31240545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 31240501 - 31240571
Alignment:
Q  145 attataactatgaggatattgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaatt 215  Q
    ||||||| ||| |||||| |||||||||| ||||||||| | |||   |||||||||||| ||||||||||    
T  31240501 attataattataaggatactgctcaaaataatcttcttctagttccaatagcaaatcatcttcttccaatt 31240571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 349
Target Start/End: Complemental strand, 35419199 - 35419025
Alignment:
Q  175 atcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaaaatga 274  Q
    ||||||||||||||| | |||||||||||||||||||||||   ||| |||||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  35419199 atcttcttccaattcctctagcaaatcatcatcttccaattgatctagcaaatccatattttgttgatcaatataattatgaggatactgcccaaaatga 35419100  T
Q  275 tattcttcaagttcttgtaacaactcgtcatcttccaattcctctagcaaatcctcattttgctgatcattataa 349  Q
    | |||||| | |||||||| ||  |  |||||||||| ||  |||||||||||| ||||||| ||||||||||||    
T  35419099 tcttcttccaattcttgtagcagattatcatcttccagttgatctagcaaatccacattttgttgatcattataa 35419025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 35423410 - 35423292
Alignment:
Q  119 tctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaattccg 218  Q
    ||||||||||  | ||||||||||| ||||| | ||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  35423410 tctagcaaatcatcattttgttgatcattatcattacaaggatattgctcaaaatgatcttcttccaattcctctagcaaatcatcatcttccaattccg 35423311  T
Q  219 ctaccaaatccatattttg 237  Q
     | ||||||||||||||||    
T  35423310 ttgccaaatccatattttg 35423292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 35419177 - 35419020
Alignment:
Q  98 aaatcattacctttcaattcatctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatcttcttccaattcatttagca 197  Q
    ||||||| | ||| ||||| ||||||||||| | |||||||||||| | ||||| |||||||||| ||| |||||||||||||||||||||| | |||||    
T  35419177 aaatcatcatcttccaattgatctagcaaatccatattttgttgatcaatataattatgaggatactgcccaaaatgatcttcttccaattcttgtagca 35419078  T
Q  198 aatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatg 255  Q
     || ||||||||||| ||   ||| |||||||| ||||||||||| ||||||||||||    
T  35419077 gattatcatcttccagttgatctagcaaatccacattttgttgatcattataattatg 35419020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 332
Target Start/End: Complemental strand, 35423158 - 35422996
Alignment:
Q  170 aaatgatcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaa 269  Q
    |||| ||||||||||||||| | || ||||||||||||||||||||   ||  |||||||||| ||||||||| |||||||||| || ||||||| ||||    
T  35423158 aaatcatcttcttccaattcctctaacaaatcatcatcttccaattgatctggcaaatccatactttgttgatcattataattacgaagatactgctcaa 35423059  T
Q  270 aatgatattcttcaagttcttgtaacaactcgtcatcttccaattcctctagcaaatcctcat 332  Q
       ||| ||||||   ||| |||| ||| || || |||||||||| |||||||||||| ||||    
T  35423058 gtcgatcttcttctgattcctgtagcaaatcatcttcttccaatttctctagcaaatcatcat 35422996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 35418892 - 35418810
Alignment:
Q  188 tcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaaa 270  Q
    |||| ||| ||||||||||||||||||||| ||| |||||||| | ||||||||| |||||||||| || ||||||| |||||    
T  35418892 tcatgtagaaaatcatcatcttccaattcctctagcaaatccacagtttgttgatcattataattacgaagatactgctcaaa 35418810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 35423429 - 35423383
Alignment:
Q  18 agaatcatcttctaactcctctagctaatcatcattttgttgatcat 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  35423429 agaatcatcttctaactcctctagcaaatcatcattttgttgatcat 35423383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 35418741 - 35418660
Alignment:
Q  135 tttgttgattattataactatgaggatattgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaattc 216  Q
    ||||||||| ||||||| |||||||||  ||||||||||||||||||| ||||||   ||| |||||||| |||||||||||    
T  35418741 tttgttgatcattataattatgaggattctgctcaaaatgatcttcttgcaattccagtagaaaatcatcttcttccaattc 35418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 35418983 - 35418894
Alignment:
Q  175 atcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactg 264  Q
    |||||||||| |||| | ||  |||||||||||||||||||   ||| |||||||| ||||||||||| ||||||| |||||||||||||    
T  35418983 atcttcttcccattcctctacaaaatcatcatcttccaattgatctagcaaatccacattttgttgatcattataaatatgaggatactg 35418894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 332
Target Start/End: Complemental strand, 35423286 - 35423122
Alignment:
Q  168 caaaatgatcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttc 267  Q
    |||||||||  ||||||||||| | ||| |||||||||||||||| ||   |||  ||||||| ||||||||||| || ||||||| || ||||| | ||    
T  35423286 caaaatgatactcttccaattcctgtagaaaatcatcatcttccatttgatctaggaaatccacattttgttgatcatgataattacgaagataccgctc 35423187  T
Q  268 aaaatgatattcttcaagttcttgtaacaactcgtcatcttccaattcctctagcaaatcctcat 332  Q
    |||  ||| ||||||   ||| |||| ||| || || |||||||||||||||| |||||| ||||    
T  35423186 aaatcgatcttcttctgattcctgtagcaaatcatcttcttccaattcctctaacaaatcatcat 35423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 281
Target Start/End: Complemental strand, 35418884 - 35418694
Alignment:
Q  97 aaaatcattacctttcaattcatctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatcttcttc---caattcattt 193  Q
    |||||||| | ||| |||||| |||||||||| |  | ||||||||| ||||||| || || |||| ||||||||  ||||||||||   |||||| | |    
T  35418884 aaaatcatcatcttccaattcctctagcaaatccacagtttgttgatcattataattacgaagatactgctcaaatcgatcttcttctcccaattcctct 35418785  T
Q  194 agcaaatcatcatc---ttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaaaatgatattctt 281  Q
    | |||||||||||    ||||||||   ||   ||||||| | ||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  35418784 aacaaatcatcattatattccaattgatctgaaaaatccaaactttgttgatcattataattatgaggattctgctcaaaatgatcttctt 35418694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 35419021 - 35418957
Alignment:
Q  164 tgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatc 228  Q
    |||||||||||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||||    
T  35419021 tgctcaaaatgatcttcttccaattcatgtagtgaatcatcttcttcccattcctctacaaaatc 35418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 228
Target Start/End: Complemental strand, 35423149 - 35423001
Alignment:
Q  80 tctttcaattcctttgaaaaatcattacctttcaattcatctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatctt 179  Q
    |||| |||||||| | | ||||||| | ||| ||||| |||| |||||| | || ||||||||| ||||||| || || |||| |||||||   ||||||    
T  35423149 tcttccaattcctctaacaaatcatcatcttccaattgatctggcaaatccatactttgttgatcattataattacgaagatactgctcaagtcgatctt 35423050  T
Q  180 cttccaattcatttagcaaatcatcatcttccaattccgctaccaaatc 228  Q
    ||||  |||| | |||||||||||| |||||||||| | ||| ||||||    
T  35423049 cttctgattcctgtagcaaatcatcttcttccaatttctctagcaaatc 35423001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35418680 - 35418633
Alignment:
Q  169 aaaatgatcttcttccaattcatttagcaaatcatcatcttccaattc 216  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  35418680 aaaatcatcttcttccaattcatgtagcaaatcatcaccttccaattc 35418633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 35418877 - 35418830
Alignment:
Q  302 tcatcttccaattcctctagcaaatcctcattttgctgatcattataa 349  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||    
T  35418877 tcatcttccaattcctctagcaaatccacagtttgttgatcattataa 35418830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 35423032 - 35422945
Alignment:
Q  170 aaatgatcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatccatattttgttgataattataattatgag 257  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||    |  |||||||| | ||||||||| ||||||||||||||    
T  35423032 aaatcatcttcttccaatttctctagcaaatcatcatcttccaattgatatggcaaatccacactttgttgatcattataattatgag 35422945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 35418962 - 35418890
Alignment:
Q  97 aaaatcattacctttcaattcatctagcaaattcttattttgttgattattataactatgaggatattgctca 169  Q
    |||||||| | ||| ||||| ||||||||||| |  ||||||||||| ||||||| |||||||||| ||||||    
T  35418962 aaaatcatcatcttccaattgatctagcaaatccacattttgttgatcattataaatatgaggatactgctca 35418890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 228
Target Start/End: Complemental strand, 35423275 - 35423127
Alignment:
Q  80 tctttcaattcctttgaaaaatcattacctttcaattcatctagcaaattcttattttgttgattattataactatgaggatattgctcaaaatgatctt 179  Q
    |||| |||||||| |  |||||||| | ||| || || |||||| |||| |  ||||||||||| || |||| || || ||||  |||||||  ||||||    
T  35423275 tcttccaattcctgtagaaaatcatcatcttccatttgatctaggaaatccacattttgttgatcatgataattacgaagataccgctcaaatcgatctt 35423176  T
Q  180 cttccaattcatttagcaaatcatcatcttccaattccgctaccaaatc 228  Q
    ||||  |||| | |||||||||||| |||||||||||| ||| ||||||    
T  35423175 cttctgattcctgtagcaaatcatcttcttccaattcctctaacaaatc 35423127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 35418955 - 35418908
Alignment:
Q  302 tcatcttccaattcctctagcaaatcctcattttgctgatcattataa 349  Q
    |||||||||||||  |||||||||||| ||||||| ||||||||||||    
T  35418955 tcatcttccaattgatctagcaaatccacattttgttgatcattataa 35418908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 35423426 - 35423312
Alignment:
Q  202 atcatcttccaattccgctaccaaatccatattttgttgataattataattatgaggatactgttcaaaatgatattcttcaagttcttgtaacaactcg 301  Q
    ||||||||| || ||| ||| ||||||   ||||||||||| ||||| ||||  |||||| || |||||||||| |||||| | ||| | || ||| ||     
T  35423426 atcatcttctaactcctctagcaaatcatcattttgttgatcattatcattacaaggatattgctcaaaatgatcttcttccaattcctctagcaaatca 35423327  T
Q  302 tcatcttccaattcc 316  Q
    |||||||||||||||    
T  35423326 tcatcttccaattcc 35423312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 35423425 - 35423380
Alignment:
Q  302 tcatcttccaattcctctagcaaatcctcattttgctgatcattat 347  Q
    |||||||| || |||||||||||||| |||||||| ||||||||||    
T  35423425 tcatcttctaactcctctagcaaatcatcattttgttgatcattat 35423380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 35419236 - 35419173
Alignment:
Q  164 tgctcaaaatgatcttcttccaattcatttagcaaatcatcatcttccaattccgctaccaaatc 228  Q
    |||||||||||||||||||||| ||| | |||  ||||||| |||||||||||| ||| ||||||    
T  35419236 tgctcaaaatgatcttcttccagttc-tgtagtgaatcatcttcttccaattcctctagcaaatc 35419173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 35419267 - 35419235
Alignment:
Q  223 caaatccatattttgttgataattataattatg 255  Q
    |||||||||||||||||||| ||||||||||||    
T  35419267 caaatccatattttgttgatcattataattatg 35419235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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