View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8669_high_1 (Length: 632)

Name: NF8669_high_1
Description: NF8669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8669_high_1
NF8669_high_1
[»] chr4 (40 HSPs)
chr4 (16-373)||(33461908-33462264)
chr4 (436-624)||(33462316-33462502)
chr4 (436-624)||(33467961-33468150)
chr4 (436-624)||(8694661-8694851)
chr4 (436-624)||(16421994-16422183)
chr4 (436-624)||(31274462-31274652)
chr4 (436-624)||(37263521-37263711)
chr4 (436-624)||(2820740-2820929)
chr4 (436-624)||(31728324-31728513)
chr4 (436-624)||(13064771-13064958)
chr4 (436-624)||(5270381-5270571)
chr4 (436-624)||(37258823-37259011)
chr4 (436-624)||(12822868-12823058)
chr4 (438-616)||(51698885-51699065)
chr4 (453-622)||(55252594-55252766)
chr4 (436-624)||(5925762-5925943)
chr4 (436-624)||(13060414-13060605)
chr4 (436-592)||(19907269-19907426)
chr4 (485-624)||(32220571-32220712)
chr4 (436-616)||(29349165-29349345)
chr4 (475-624)||(27183183-27183324)
chr4 (475-624)||(12875352-12875503)
chr4 (475-621)||(19107529-19107678)
chr4 (475-621)||(19102917-19103065)
chr4 (486-624)||(32081176-32081313)
chr4 (475-624)||(40408896-40409043)
chr4 (436-624)||(23094057-23094245)
chr4 (475-621)||(48275836-48275981)
chr4 (493-624)||(31766820-31766953)
chr4 (475-562)||(8029332-8029419)
chr4 (484-620)||(8028161-8028292)
chr4 (475-620)||(47245082-47245227)
chr4 (556-622)||(19907198-19907264)
chr4 (436-516)||(6943820-6943900)
chr4 (532-616)||(6943740-6943826)
chr4 (475-618)||(12878856-12879000)
chr4 (475-616)||(16948957-16949099)
chr4 (495-568)||(28601624-28601697)
chr4 (507-594)||(29985010-29985099)
chr4 (584-621)||(28601580-28601617)
[»] chr3 (24 HSPs)
chr3 (436-624)||(20520909-20521099)
chr3 (436-624)||(7570173-7570363)
chr3 (436-624)||(18472954-18473144)
chr3 (436-624)||(23660447-23660637)
chr3 (436-624)||(23665079-23665269)
chr3 (436-624)||(757322-757511)
chr3 (453-624)||(55326725-55326897)
chr3 (436-597)||(20175368-20175528)
chr3 (436-621)||(46964964-46965150)
chr3 (475-617)||(55432182-55432323)
chr3 (436-621)||(14437651-14437835)
chr3 (436-624)||(18468160-18468350)
chr3 (436-624)||(27709879-27710066)
chr3 (453-624)||(12964857-12965032)
chr3 (436-624)||(12970766-12970958)
chr3 (475-621)||(3656254-3656402)
chr3 (436-598)||(3426047-3426208)
chr3 (475-621)||(29351178-29351327)
chr3 (476-619)||(2206829-2206970)
chr3 (556-624)||(39774905-39774973)
chr3 (485-616)||(7860663-7860797)
chr3 (489-624)||(12111605-12111733)
chr3 (456-519)||(32473122-32473185)
chr3 (475-553)||(38891138-38891215)
[»] chr2 (29 HSPs)
chr2 (436-624)||(12797877-12798068)
chr2 (436-624)||(30651862-30652052)
chr2 (436-624)||(19891465-19891653)
chr2 (436-624)||(29678626-29678816)
chr2 (436-624)||(25496342-25496532)
chr2 (436-616)||(18345372-18345554)
chr2 (437-619)||(19896903-19897085)
chr2 (436-624)||(12361197-12361383)
chr2 (436-624)||(17967922-17968112)
chr2 (436-620)||(17974309-17974495)
chr2 (436-624)||(9179684-9179875)
chr2 (436-624)||(9184375-9184566)
chr2 (436-624)||(25477247-25477437)
chr2 (436-624)||(24536974-24537171)
chr2 (437-595)||(20101609-20101769)
chr2 (475-621)||(42925673-42925819)
chr2 (436-553)||(1933967-1934084)
chr2 (475-617)||(31329017-31329161)
chr2 (475-617)||(31335738-31335882)
chr2 (518-624)||(40846622-40846730)
chr2 (514-624)||(25637801-25637912)
chr2 (475-621)||(28604037-28604184)
chr2 (551-623)||(34495181-34495253)
chr2 (468-615)||(15446273-15446422)
chr2 (479-620)||(44630448-44630592)
chr2 (556-624)||(12001979-12002053)
chr2 (478-624)||(32080324-32080474)
chr2 (436-494)||(40846479-40846537)
chr2 (583-624)||(1934098-1934139)
[»] chr8 (23 HSPs)
chr8 (436-624)||(1808399-1808588)
chr8 (444-624)||(38181248-38181430)
chr8 (436-624)||(40124852-40125042)
chr8 (436-624)||(28559075-28559264)
chr8 (436-624)||(44924879-44925069)
chr8 (449-624)||(26780052-26780228)
chr8 (436-624)||(1909905-1910096)
chr8 (448-624)||(2966533-2966711)
chr8 (438-624)||(28564258-28564443)
chr8 (453-624)||(18875360-18875533)
chr8 (438-624)||(15950528-15950723)
chr8 (484-581)||(17021247-17021345)
chr8 (484-581)||(17551684-17551782)
chr8 (464-621)||(7002594-7002755)
chr8 (509-624)||(33417478-33417595)
chr8 (436-624)||(23547569-23547752)
chr8 (495-621)||(17953164-17953290)
chr8 (517-619)||(33100541-33100644)
chr8 (497-580)||(17798041-17798124)
chr8 (583-621)||(17027092-17027130)
chr8 (436-536)||(17027130-17027224)
chr8 (583-621)||(17557584-17557622)
chr8 (436-536)||(17557622-17557716)
[»] chr5 (31 HSPs)
chr5 (436-624)||(37247757-37247947)
chr5 (436-624)||(6154390-6154580)
chr5 (436-624)||(26668226-26668416)
chr5 (436-624)||(26939823-26940013)
chr5 (436-617)||(7452710-7452893)
chr5 (436-624)||(10759320-10759509)
chr5 (436-624)||(29166931-29167121)
chr5 (436-621)||(36424589-36424776)
chr5 (436-624)||(37646013-37646205)
chr5 (436-624)||(12104002-12104183)
chr5 (436-624)||(36430466-36430654)
chr5 (475-624)||(37536934-37537086)
chr5 (436-624)||(20180113-20180298)
chr5 (436-624)||(39519343-39519523)
chr5 (489-602)||(6511614-6511729)
chr5 (436-624)||(39523982-39524162)
chr5 (475-621)||(35678895-35679043)
chr5 (477-624)||(17162804-17162955)
chr5 (448-574)||(23757134-23757262)
chr5 (448-574)||(23822590-23822718)
chr5 (499-624)||(17159324-17159452)
chr5 (436-526)||(40150243-40150333)
chr5 (475-624)||(23689019-23689170)
chr5 (518-618)||(40148797-40148897)
chr5 (475-599)||(4872855-4872981)
chr5 (504-624)||(40567628-40567750)
chr5 (475-621)||(9725770-9725912)
chr5 (495-624)||(15149613-15149740)
chr5 (475-535)||(22832503-22832563)
chr5 (587-624)||(6511740-6511777)
chr5 (556-611)||(16115309-16115364)
[»] chr1 (19 HSPs)
chr1 (436-624)||(10136273-10136463)
chr1 (436-624)||(25844704-25844894)
chr1 (479-624)||(51040522-51040669)
chr1 (437-624)||(16648591-16648778)
chr1 (475-624)||(38622137-38622288)
chr1 (475-621)||(23191836-23191982)
chr1 (475-621)||(16036557-16036705)
chr1 (475-621)||(40166891-40167039)
chr1 (474-624)||(19797990-19798143)
chr1 (436-624)||(26926687-26926868)
chr1 (495-624)||(12260924-12261053)
chr1 (507-621)||(11807170-11807286)
chr1 (516-622)||(39199805-39199917)
chr1 (475-621)||(39586079-39586223)
chr1 (567-624)||(10141041-10141098)
chr1 (436-524)||(5100133-5100220)
chr1 (562-621)||(47450279-47450338)
chr1 (436-532)||(8138634-8138727)
chr1 (487-578)||(46697309-46697400)
[»] chr7 (30 HSPs)
chr7 (436-624)||(4931171-4931361)
chr7 (436-624)||(21672153-21672342)
chr7 (436-621)||(3046525-3046711)
chr7 (437-624)||(42625538-42625731)
chr7 (436-624)||(12256970-12257159)
chr7 (453-624)||(3880916-3881092)
chr7 (436-624)||(26342155-26342343)
chr7 (475-619)||(23247556-23247701)
chr7 (436-616)||(10392045-10392229)
chr7 (436-553)||(12802304-12802420)
chr7 (453-580)||(44508271-44508400)
chr7 (522-624)||(12181796-12181900)
chr7 (439-568)||(2595774-2595905)
chr7 (495-621)||(13313331-13313459)
chr7 (475-580)||(23151683-23151792)
chr7 (475-621)||(26286153-26286303)
chr7 (557-624)||(12800338-12800405)
chr7 (485-617)||(4580420-4580554)
chr7 (485-624)||(8269248-8269397)
chr7 (478-614)||(10387346-10387488)
chr7 (547-623)||(16373297-16373373)
chr7 (475-596)||(30259238-30259361)
chr7 (478-624)||(15973669-15973819)
chr7 (562-623)||(6590099-6590160)
chr7 (440-621)||(27246511-27246691)
chr7 (560-624)||(9814959-9815024)
chr7 (560-624)||(10716884-10716949)
chr7 (574-619)||(44508427-44508472)
chr7 (482-578)||(10674634-10674732)
chr7 (585-621)||(23152177-23152213)
[»] chr6 (26 HSPs)
chr6 (436-624)||(16835119-16835310)
chr6 (440-624)||(17963520-17963706)
chr6 (454-624)||(6406836-6407008)
chr6 (436-624)||(11569651-11569839)
chr6 (436-620)||(11533660-11533845)
chr6 (436-620)||(11559170-11559355)
chr6 (437-624)||(20747256-20747445)
chr6 (454-624)||(17600328-17600497)
chr6 (437-624)||(19994344-19994532)
chr6 (436-624)||(2699072-2699263)
chr6 (436-623)||(11612862-11613050)
chr6 (453-624)||(12405335-12405508)
chr6 (440-624)||(33686606-33686791)
chr6 (474-621)||(12689920-12690068)
chr6 (440-610)||(22694347-22694517)
chr6 (475-620)||(22610463-22610608)
chr6 (475-619)||(12797779-12797929)
chr6 (492-616)||(25313487-25313613)
chr6 (492-616)||(26200981-26201107)
chr6 (437-597)||(11428933-11429094)
chr6 (558-624)||(5856933-5856999)
chr6 (492-622)||(17914542-17914675)
chr6 (475-621)||(19674724-19674871)
chr6 (437-506)||(5857028-5857096)
chr6 (567-624)||(14509925-14509982)
chr6 (440-507)||(29891923-29891991)
[»] scaffold0002 (2 HSPs)
scaffold0002 (436-624)||(5012-5202)
scaffold0002 (436-624)||(442898-443087)
[»] scaffold0240 (1 HSPs)
scaffold0240 (436-624)||(4919-5107)
[»] scaffold0054 (2 HSPs)
scaffold0054 (438-624)||(30125-30313)
scaffold0054 (475-620)||(26393-26540)
[»] scaffold0057 (1 HSPs)
scaffold0057 (438-624)||(36070-36257)
[»] scaffold0352 (1 HSPs)
scaffold0352 (436-624)||(8056-8247)
[»] scaffold0690 (1 HSPs)
scaffold0690 (436-624)||(6180-6371)
[»] scaffold0011 (1 HSPs)
scaffold0011 (475-595)||(64892-65013)
[»] scaffold0595 (1 HSPs)
scaffold0595 (475-621)||(3796-3948)


Alignment Details
Target: chr4 (Bit Score: 295; Significance: 1e-165; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 16 - 373
Target Start/End: Original strand, 33461908 - 33462264
Alignment:
Q  16 ctaattacttcggtcattttgcaagggttcttgttgacattgttgcagcagaaaaaattgtatgacaccacggtgaaagtagtaggcttttactttttac 115  Q
    |||||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  33461908 ctaattgcttcggtcattttgcaagggttcttgttgacattgt-gtagcagaaaa-attgtatgacaccacggtgaaaggagtaggcttttactttttac 33462005  T
Q  116 attgaagttgaaaatgatagactttcttcaaaagtggaatgaatacaatgcctcagtaccagtacgatagtagaaggtcaatactcatggaaagcatgtt 215  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33462006 attgaagttgaaaatgatagacttccttcaagagtggaaggaatacaatgcctcagaaccagtacgatagtagaaggtcaatactcatggaaagcatgtt 33462105  T
Q  216 tccctcgccaaaataatctcaactgaccttccatactaaagacaactcaacaatcattaatatgttaattcgggtacaaataggaggaggaacgcagata 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33462106 tccctcgccaaaataatctcaactgaccttccatactaaagacaactcaacaatcattaatatgttaattcgggtgcaaataggaggaggaacgcagata 33462205  T
Q  316 gacagacactttagcgactttctatgagcatagaaatgcgcagggtg-ataatttagat 373  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  33462206 gacagacactttagcgactgtctatgagcatagaaatgcgcagggcgcataatttagat 33462264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 33462316 - 33462502
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  33462316 gttggaacattagtgtaatgttcgaagaaaaattgaataattaaacaccaaataattata-tttgatctaatgttgtgtgaattgaaaaaatagagtgtg 33462414  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  33462415 gaggtcccaa-taaaataagacacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatgataaaaataatagta 33462502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 33467961 - 33468150
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  33467961 gttggaacattagtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtaaattgaaaaaatagagtgta 33468060  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||  ||||| |||||||  || ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  33468061 gg-ttcccacataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatgataaaaataatagta 33468150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 8694851 - 8694661
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8694851 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 8694752  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  8694751 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 8694661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 16422183 - 16421994
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| ||||||||| | |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16422183 gttggaacatt-gtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 16422085  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||| ||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  16422084 ggggtcccacataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatgataaaaataatagta 16421994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 31274652 - 31274462
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31274652 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 31274553  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||| | |||||||||||||||||    
T  31274552 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtgataaaaataatagta 31274462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 37263521 - 37263711
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| ||||| || |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37263521 gttggaacattgatgtgatgtttgatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 37263620  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  37263621 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 37263711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 2820929 - 2820740
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| | |||||||| ||||||| |  ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  2820929 gttggaacattggtgtgaagttggaaggaaaattggaagattaaacaccaagtaattata-tttgatctagtgttgtgtgaattgaaaaattagagtgtg 2820831  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  2820830 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatgataaaaataatagta 2820740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 31728324 - 31728513
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31728324 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattataatttgatctaatgttgtgtgaattgaaaaaatagagtgtg 31728423  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||||    
T  31728424 gg-gtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatgataaaaataatagta 31728513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 13064771 - 13064958
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| |||||||||||||||||| | || |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  13064771 gttggaacattggtgtgatgttggaagaaaaattggaaaaataaataccaagtaattatactttgatctaatgtt---tgaattgaaaaaatagagtgtg 13064867  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  | |||||||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  13064868 ggggtcccacataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 13064958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 5270381 - 5270571
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5270381 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagaatgtg 5270480  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaata-tttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  5270481 gg-gtcccacataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatgataaaaataatagta 5270571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 37258823 - 37259011
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37258823 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaatta--ctttgatctaatgttgtgtgaattgaaaaaatagagtgtg 37258920  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  ||||||||  | |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  37258921 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 37259011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 12822868 - 12823058
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | |||||| |  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12822868 gttggaacattagtgtgatgttggaaaataaattggaagatcaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 12822967  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  ||  ||||||||||||||||||||| ||  ||||||||||||||||| || |||||||||||||||||||||    
T  12822968 ggggtcccacataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatgataaaaataatagta 12823058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 438 - 616
Target Start/End: Complemental strand, 51699065 - 51698885
Alignment:
Q  438 tggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggg 537  Q
    |||||||||||| | ||||||||| | ||||||||  |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  51699065 tggaacattagtttgatgttggaaaataaattgaaagattaaacaccaaataattatactttgaactaatgttgcgtgaattgaaaaaatagagtgtggg 51698966  T
Q  538 agtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaa 616  Q
     |||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  51698965 ggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaa 51698885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 453 - 622
Target Start/End: Complemental strand, 55252766 - 55252594
Alignment:
Q  453 atgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaa 551  Q
    |||||||| ||||||||| |  | |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||| ||||||    
T  55252766 atgttggatgaaaaattggaagactaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaaatagagtgtggtggtcccacataaaa 55252667  T
Q  552 ta--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatag 622  Q
    ||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  55252666 tagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatag 55252594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 5925762 - 5925943
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||       |    
T  5925762 gttggaacattgatgtgatgttggatgaaaaattggaagattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaaat-------g 5925854  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  5925855 ggggtcccacataaaatagaacacacattagtagtgtttaaattatggtatttaattttaaatacttgataatgataaaaataatagta 5925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 13060605 - 13060414
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaa-aaaatagagtgt 534  Q
    |||||||||||||||| |||||| || | |||||| |  ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  13060605 gttggaacattagtgtgatgttgaaaaataaattggaagattaaaccccaagtaattatactttgatctaatattgtgtgaattgaaaaaaatagagtgt 13060506  T
Q  535 gggagtcccaaataaaataaga---cacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||  ||| || |||||| ||||   |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  13060505 ggtggtcacacataaaa-aagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataacaataatagta 13060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 436 - 592
Target Start/End: Complemental strand, 19907426 - 19907269
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  19907426 gttggaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatattttgatctagtgttgtgtgaattgaaaaaataaagtgtg 19907327  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaatt 592  Q
    || ||| || |||||||  || ||||||||||| |||||||||||||| ||||||||||    
T  19907326 gg-gtctcacataaaatagaacacacacattagcagtgtttaaattgcggtatttaatt 19907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 485 - 624
Target Start/End: Original strand, 32220571 - 32220712
Alignment:
Q  485 aagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagaca--cacattagtagtgtttaaattgca 582  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||  |||  ||||||| ||||||||||||| |     
T  32220571 aagtaattatattttgatctaatattgtgtgaattaaaaaaatagagtgtgggggtcccacataaaatagaacatacacattattagtgtttaaattccg 32220670  T
Q  583 gtatttaattttaaatatttgataatgataaaaataatagta 624  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  32220671 atatttaattttaaatatttgataatgataaaaataatagta 32220712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 436 - 616
Target Start/End: Original strand, 29349165 - 29349345
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| |||||||||| |||| || |  ||||||||| |||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  29349165 gttggaacattggtgtgatgttggaaggaaaactggaagattaaacactaagtaattatactttgat-tagtgttgagtgaattgaaaaaatagagtgtg 29349263  T
Q  536 ggagtcccaaataaaataagac--acacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaa 616  Q
     | |||||| ||||||||  ||  ||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  29349264 ag-gtcccacataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatgataaaaa 29349345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 475 - 624
Target Start/End: Complemental strand, 27183324 - 27183183
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||        |||| |||||| ||||||||  |||||||||||||||||||    
T  27183324 attaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaa--------tgggggtcccacataaaatagaacacacattagtagtgttt 27183233  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  27183232 aaattatggtatttaattttaaatacttgataatgataaaaataatagta 27183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 475 - 624
Target Start/End: Complemental strand, 12875503 - 12875352
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||   |||||||  ||  |||||||||||| | |    
T  12875503 attaaacaccaagtaattagactttcatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaatagaacccacacattagtaatat 12875404  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||| |  |||||| ||||||||||||||||||||||||| |||||||||    
T  12875403 ttaaatagtggtatttgattttaaatatttgataatgataaacataatagta 12875352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 19107678 - 19107529
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaa-tgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtg 571  Q
    |||||||||||||| |||| |||||||||||| | |||||||||||||||| |||||||||||  |||||| ||||||||  | ||||||||||||||||    
T  19107678 attaaacaccaagttattaaactttgatctaagtattgtgtgaattgaaaatatagagtgtggaggtcccacataaaatagaacacacacattagtagtg 19107579  T
Q  572 tttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||| |  |||||||||||||||||  |||||||||| |||||||||    
T  19107578 tttaaatagtggtatttaattttaaatacctgataatgatgaaaataata 19107529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 19103065 - 19102917
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    ||||||| |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||  || |||||||||| ||||||    
T  19103065 attaaactccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgt 19102966  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||| |   ||||||||||||||||  |||||||||| |||||||||    
T  19102965 ttaaatagtgatatttaattttaaatacctgataatgatgaaaataata 19102917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 486 - 624
Target Start/End: Original strand, 32081176 - 32081313
Alignment:
Q  486 agtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagac--acacattagtagtgtttaaattgcag 583  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||  |||||||  ||  |||||||||||||||||||||||       
T  32081176 agtaattatactttgatctaatgt---gtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaactcacacattagtagtgtttaaattgtga 32081272  T
Q  584 tatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  32081273 tatttaattttaaatacttgataattataaaaataatagta 32081313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 475 - 624
Target Start/End: Complemental strand, 40409043 - 40408896
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacat--tagtagtgt 572  Q
    ||||||||| || | ||||||||||||||||||||||| |||||| |||||||||  |||||| || ||||||||||||  ||||||||  || ||||||    
T  40409043 attaaacactaaatgattatactttgatctaatgttgtatgaattaaaaaaatag--tgtggg-gtaccaaataaaatagaacacacatattattagtgt 40408947  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  40408946 ttaaattgcggtatttaattttaaatatttgat-atggtaaaaataatagta 40408896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 23094245 - 23094057
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| | ||| ||| ||||||||||  ||||||||||||| ||||| | ||||| |||||||  | |||||||||||||||||| |||    
T  23094245 gttggaacattgatgtgaagttagaaaaaaaattgaaagattaaacaccaaggaattagaatttgagctaatgtgatatgaattgaaaaaatagagagtg 23094146  T
Q  536 ggagtcccaaataaaataagacacaca--ttagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||| | ||||||||| |||||||  ||||||||| ||||||| |   ||||||||||||||| ||||||||||||||||||||||||    
T  23094145 gg-gtcc-acataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatgataaaaataatagta 23094057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 48275836 - 48275981
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    |||||||| ||||| |||| ||||||||||  ||||||||||||||||||||||||||||||| || ||| ||||||||  ||||||| ||| |||||||    
T  48275836 attaaacatcaagttattaaactttgatcttgtgttgtgtgaattgaaaaaatagagtgtgggggt-ccatataaaatataacacacactagcagtgttt 48275934  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||| |  ||||||| ||||||||| || |||||||| |||||||||    
T  48275935 aaatagtggtatttatttttaaatacttaataatgatgaaaataata 48275981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 493 - 624
Target Start/End: Complemental strand, 31766953 - 31766820
Alignment:
Q  493 atactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtattta 589  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||| |||||| ||||||||  | |||||||||| ||||||| ||||||  |||||||    
T  31766953 atactttgatctaatgtt-tgtgaattgaaaaaaatagattgtgggggtcccacataaaatagaacacacacattaatagtgtt-aaattgtggtattta 31766856  T
Q  590 atttt-aaatatttgataatgataaaaataatagta 624  Q
    ||||| ||||| ||||||||||||||||||||||||    
T  31766855 atttttaaatacttgataatgataaaaataatagta 31766820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 562
Target Start/End: Original strand, 8029332 - 8029419
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacaca 562  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  8029332 attaaacaccaagtaattaaactttgatctagtattgtgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaacacaca 8029419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 620
Target Start/End: Original strand, 8028161 - 8028292
Alignment:
Q  484 caagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtttaaattgcag 583  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||  |     || | || | || ||||||||||||||||||||||| |  |    
T  8028161 caagtaattaaactttgatcgaatgttgtgtgaattgaaaaaatagagtgtaag-----cataaaatagaacacacacattagtagtgtttaaatagttg 8028255  T
Q  584 tatttaattttaaatatttgataatgataaaaataat 620  Q
    ||||||||||||||||  | |||||||||||||||||    
T  8028256 tatttaattttaaataactaataatgataaaaataat 8028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 47245227 - 47245082
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgt 572  Q
    ||||||||| |||| |||| | ||||||||| | |||||||||||||||||||||  ||||||  ||| ||||||||||  | |||||||||| ||||||    
T  47245227 attaaacactaagttattaaagtttgatctagtattgtgtgaattgaaaaaatag--tgtggggatcctaaataaaatagaacacacacattattagtgt 47245130  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataat 620  Q
    |||||| ||  ||||||||||||||||  ||||| |||| ||||||||    
T  47245129 ttaaatagcgatatttaattttaaataactgatattgatgaaaataat 47245082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 622
Target Start/End: Complemental strand, 19907264 - 19907198
Alignment:
Q  556 acacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatag 622  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  19907264 acacacattagcagtgtttaaattgcggtatttaattttaaatacttgatgatgataaaaataatag 19907198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 436 - 516
Target Start/End: Complemental strand, 6943900 - 6943820
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtga 516  Q
    |||| ||||||||||| |||||||||||||||||| |  |||||||| ||||||||||||||||||| || ||||||||||    
T  6943900 gttgcaacattagtgtgatgttggaagaaaaattggaagattaaacatcaagtaattatactttgatttactgttgtgtga 6943820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 616
Target Start/End: Complemental strand, 6943826 - 6943740
Alignment:
Q  532 tgtgggagtcccaaataaaataagacaca--cattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaa 616  Q
    |||| |||||||| ||||||||  |||||  |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  6943826 tgtgtgagtcccacataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaa 6943740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 618
Target Start/End: Complemental strand, 12879000 - 12878856
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    ||||||||| |||||| || ||||| ||||| ||||||||||||||||||||||||||  | |  ||||| |||||||  || | |||||||| ||||||    
T  12879000 attaaacactaagtaaatagactttcatctagtgttgtgtgaattgaaaaaatagagtaagaggatcccacataaaatagaacatacacattaatagtgt 12878901  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaata 618  Q
    ||||||     ||||| ||| |||||| ||||||||||||||||||    
T  12878900 ttaaataatgatattt-attataaatacttgataatgataaaaata 12878856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 616
Target Start/End: Complemental strand, 16949099 - 16948957
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaa-ataagacacacattagtagtgtt 573  Q
    ||||||||||||| ||| | ||||||| ||| ||| || |||||| |||||||||| |   || ||||||  |||| | || ||||| ||||||||||||    
T  16949099 attaaacaccaagcaataaaactttgagctagtgtggtatgaattaaaaaaatagaatacaggtgtcccatttaaatagaacacacatattagtagtgtt 16949000  T
Q  574 taaattgcagtatttaattttaaatatttgataatgataaaaa 616  Q
     |||||   ||||||| |||| |||| ||||||||||||||||    
T  16948999 caaattcttgtatttagttttgaatacttgataatgataaaaa 16948957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 28601697 - 28601624
Alignment:
Q  495 actttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagta 568  Q
    ||||||||||| ||  ||||||||| |||||||||| |||||| |||||| ||||||||  ||||||| |||||    
T  28601697 actttgatctagtgcggtgtgaattaaaaaaatagaatgtgggggtcccacataaaatagaacacacaatagta 28601624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 507 - 594
Target Start/End: Original strand, 29985010 - 29985099
Alignment:
Q  507 tgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata-ag-acacacattagtagtgtttaaattgcagtatttaatttt 594  Q
    ||||||||||||||||||||||||||||||  ||||||  ||||||| || | ||| |||||||||||||| | ||  ||||||||||||    
T  29985010 tgttgtgtgaattgaaaaaatagagtgtggatgtcccacgtaaaatagagcaaacaaattagtagtgtttacaatgttgtatttaatttt 29985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 621
Target Start/End: Complemental strand, 28601617 - 28601580
Alignment:
Q  584 tatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||||||||||||||||  |||||||||||||||||    
T  28601617 tatttaattttaaatatttagtaatgataaaaataata 28601580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 5e-73; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 20521099 - 20520909
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20521099 gttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 20521000  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  20520999 ggggtcccacataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatgataaaaataatagta 20520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 7570173 - 7570363
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||| ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7570173 gttggaacattaatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 7570272  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || ||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  7570273 ggggtcccgcataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 7570363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 18473144 - 18472954
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18473144 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 18473045  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  18473044 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 18472954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 23660447 - 23660637
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23660447 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 23660546  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |   ||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  23660547 gagctcccacataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 23660637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 23665079 - 23665269
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23665079 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 23665178  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |   ||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  23665179 gagctcccatataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 23665269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 757322 - 757511
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  757322 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 757421  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || ||| || |||||||  || |||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||    
T  757422 ggggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatgataaaaataatagta 757511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 453 - 624
Target Start/End: Complemental strand, 55326897 - 55326725
Alignment:
Q  453 atgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat 552  Q
    |||||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  55326897 atgttggatgaaaaattggaagattaaacaccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaatatagtgtgggggtcccacataaaat 55326799  T
Q  553 a--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  | |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  55326798 agaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 55326725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 436 - 597
Target Start/End: Complemental strand, 20175528 - 20175368
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20175528 gttggaacattagtgtgatgttggaaaataaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgttaattgaaaaaatagagtgtg 20175429  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaa 597  Q
    || || ||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  20175428 gg-gttccacataaaatagaacacacattagtagtatttaaattgcagtatttaattttaaa 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 436 - 621
Target Start/End: Complemental strand, 46965150 - 46964964
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||||||||||||| | |||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46965150 gttggaacattagtgtaatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 46965051  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
     | | |||| |||||||  ||  ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  46965050 agggccccacataaaatagaactcacacatta-tagtgtttaaactgcggtatttaattttaaatacttgataatgataaaaataata 46964964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 475 - 617
Target Start/End: Complemental strand, 55432323 - 55432182
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||| | ||||||  |||||||||||||||||||    
T  55432323 attaaacaccaagtaattata-tttgatctaatgctgtgtgaattgaaaaaataaagtgtgggggtcccacacaaaatagaacacacattagtagtgttt 55432225  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaat 617  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  55432224 aaattgcagtatttaattttaaatatttgataatgataaaaat 55432182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 436 - 621
Target Start/End: Original strand, 14437651 - 14437835
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  14437651 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatct---gttgtgtgaattgaaaaaatagagtgtg 14437747  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |  ||| || ||||||||  | |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  14437748 gaggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataata 14437835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 18468350 - 18468160
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaa-aaaatagagtgt 534  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  18468350 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaaatagagtgt 18468251  T
Q  535 gggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| || | | |||| ||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  18468250 gggggt-ctacataatatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 18468160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 27710066 - 27709879
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatct-aatgttgtgtgaattgaaaaaatagagtgt 534  Q
    |||||||||||  ||| |||||| | ||||||||| |  ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  27710066 gttggaacattgatgtgatgttgaatgaaaaattggaagattaaacaccaagta-ttatactttgattttaatgttgtgtgaattgaaaaaatagagtgt 27709968  T
Q  535 gggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| |||||| ||||||||  ||| || ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  27709967 ggg-gtcccacataaaatagaacatacgttagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 27709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 624
Target Start/End: Original strand, 12964857 - 12965032
Alignment:
Q  453 atgttggaagaaaaatt-gaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattg-aaaaaatagagtgtgggagtcccaaataaa 550  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||  |||||| |||||    
T  12964857 atgttggatgaaaaattagaatgattaaacaccaagtaattatactttgatttaatgttgcatgaattgaaaaaaatagagtgtggtggtcccacataaa 12964956  T
Q  551 at-aagacacacattagtagtgtttaaattgcagtatttaatttt-aaatatttgataatgataaaaataatagta 624  Q
    || || ||| || ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  12964957 ataaacacaaactttagtagtgtttaaattgcggtatttaattttaaaatatttgataatgataaaaataatagta 12965032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 12970766 - 12970958
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  | | |||||||| ||||||| | |  |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  12970766 gttggaacattgatatgatgttggatgaaaaatcggaagattaaacaccaagtaattatacgttgatttaatgttgtgtgaattgaaaaaataaagtgtg 12970865  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaatttt-aaatatttgataatgat-aaaaataatagta 624  Q
    |   ||||| |||||||  || |||||| ||||||||||||||||||| |||||||||||| ||||| | ||||||||| |||||||||||||    
T  12970866 gtgatcccacataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatgataaaaaataatagta 12970958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 3656254 - 3656402
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacac--acattagtagtgt 572  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||| || |||||| ||||||||  ||||  |||||||||||||    
T  3656254 attaaacaccaagtaattaaactttgatttagtgttgtgtgaattgaaaaaatagaatgtaggggtcccacataaaatagaacacggacattagtagtgt 3656353  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||| |  |||||||||||||||||  |||||||||| |||||||||    
T  3656354 ttaaatagtggtatttaattttaaatacctgataatgatgaaaataata 3656402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 436 - 598
Target Start/End: Complemental strand, 3426208 - 3426047
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | ||||| ||  ||||||||||||||||||||||||| |||| ||||||||||||||   |||||||| ||||    
T  3426208 gttggaacattagtgtgatgttggaaaataaatttaaagattaaacaccaagtaattatactttaatcttatgttgtgtgaatt---aaaatagaatgtg 3426112  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaat 598  Q
    || || ||| |||||||  ||  ||||||||||||||||||||| ||| ||||| ||||||||||    
T  3426111 ggggtaccacataaaatagaactcacacattagtagtgtttaaactgcggtattcaattttaaat 3426047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 29351327 - 29351178
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaataagacacaca--ttagtagtg 571  Q
    |||||||||||| | |||| ||||||||| | |||||||||||||||||||| || || ||||  |||||| ||||||||| |||||||  ||| |||||    
T  29351327 attaaacaccaatttattaaactttgatccagtgttgtgtgaattgaaaaaaataaagcgtggaggtcccacataaaataaaacacacacattattagtg 29351228  T
Q  572 tttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||| |  |||||||||||||||||| |||||||||| |||||||||    
T  29351227 tttaaatagtggtatttaattttaaatatctgataatgatgaaaataata 29351178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 476 - 619
Target Start/End: Original strand, 2206829 - 2206970
Alignment:
Q  476 ttaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    ||||||||||||| |||| | |||||| || |||||||| ||||||||||| ||||||||||| | |||| |||||||| || |||||| ||||||||||    
T  2206829 ttaaacaccaagttattaaattttgat-tagtgttgtgtaaattgaaaaaaatagagtgtgggggacccacataaaata-ga-acacatcagtagtgttt 2206925  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataa 619  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||    
T  2206926 aaatagcagtatttaattttacatatctgataatgatgaaaataa 2206970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 556 - 624
Target Start/End: Original strand, 39774905 - 39774973
Alignment:
Q  556 acacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  39774905 acacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 39774973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 616
Target Start/End: Complemental strand, 7860797 - 7860663
Alignment:
Q  485 aagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgca 582  Q
    ||||||||| ||||||||||| | |||   ||||||||||||||||||||||  |||||| |||||||  || |||||||||| |||||||||||||       
T  7860797 aagtaattagactttgatctagttttggacgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtttaaattatg 7860698  T
Q  583 gtatttaa-ttttaaatatttgataatgataaaaa 616  Q
    |||||||| |||||||||| | |||||||||||||    
T  7860697 gtatttaatttttaaatatcttataatgataaaaa 7860663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 624
Target Start/End: Original strand, 12111605 - 12111733
Alignment:
Q  489 aattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtattt 588  Q
    |||||||||||||| ||  |||||||||||||||||| || ||||||||  || || ||||||||  ||||||    ||| |||||||||| | ||||||    
T  12111605 aattatactttgatata--gttgtgtgaattgaaaaagtaaagtgtggg--tctcacataaaatagaacacacc---gtaatgtttaaatttcggtattt 12111697  T
Q  589 aattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||  ||||||||||||||||||||||||    
T  12111698 aattttaaatgcttgataatgataaaaataatagta 12111733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 519
Target Start/End: Original strand, 32473122 - 32473185
Alignment:
Q  456 ttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaatt 519  Q
    ||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  32473122 ttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaatt 32473185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 553
Target Start/End: Complemental strand, 38891215 - 38891138
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata 553  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||| | |||||| ||||||||    
T  38891215 attaaacaccgagtaattaaactttgatctaatgttttgtgaattgaaaaaatatagtgtgag-gtcccacataaaata 38891138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 8e-69; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 12798068 - 12797877
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||| |||||||| |||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12798068 gttggaatattagtgtgatgttggaagaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 12797969  T
Q  536 gga-gtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| |||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  12797968 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 12797877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 30652052 - 30651862
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30652052 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 30651953  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  30651952 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 30651862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 19891465 - 19891653
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  19891465 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccatgtaattatactttgatctaatcttgtgtgaattgaaaaaatagaatgtg 19891564  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||| ||||||||  |||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  19891565 ggagtcccacataaaatagaacacacattattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 19891653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 29678816 - 29678626
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||| ||||||||||| |||||||||||||||||| |  |||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  29678816 gttgcaacattagtgtgatgttggaagaaaaattggaagattaaatactaaggaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgta 29678717  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||  ||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29678716 gggatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagta 29678626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 25496342 - 25496532
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||| |||||| |||| ||||||||| | |||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25496342 gttgtaacatttgtgtgatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatattgtgtgaattgaaaaaatagagtgtg 25496441  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  |||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25496442 gaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 25496532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 616
Target Start/End: Complemental strand, 18345554 - 18345372
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18345554 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtgtg 18345455  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaa 616  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| || |||||||||||||    
T  18345454 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatgataaaaa 18345372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 437 - 619
Target Start/End: Complemental strand, 19897085 - 19896903
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgg 536  Q
    |||||||||| || | ||||||||||| ||| || |  |||||| | |||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  19897085 ttggaacattggtatgatgttggaagagaaaatggaagattaaatatcaagtaattatattttgatataatgttgtgtgaattgaaaaaatagagcgtgg 19896986  T
Q  537 gagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataa 619  Q
    | |||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19896985 gggtcccacataaaatagaacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataa 19896903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 12361383 - 12361197
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||||||||  |||||||| | |||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12361383 gttggaacattagtgtggtgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagaatgtg 12361284  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  || ||| ||||||||  | |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  12361283 g--gttccacataaaatagaagacacattagtagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataatagta 12361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 17967922 - 17968112
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17967922 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtgtg 17968021  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaata-tttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || ||||| |||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  17968022 gg-gtcccacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataatagta 17968112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 436 - 620
Target Start/End: Original strand, 17974309 - 17974495
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  17974309 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt- 17974407  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaata-tttgataatgataaaaataat 620  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  17974408 ggtgtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatgataaaaataat 17974495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 9179684 - 9179875
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattg--aaaaaatagagtg 533  Q
    ||||||| |||  ||| ||| |||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  9179684 gttggaatattgatgtgatggtggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaaaatagagtg 9179783  T
Q  534 tgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||| |||||| |||||||  || |||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||    
T  9179784 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatgataaaaataatagta 9179875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 9184375 - 9184566
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattg--aaaaaatagagtg 533  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||| |||||| ||||||||||||||||||||||||||  |||||||||||||    
T  9184375 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattaaactttgatctaatgttgtgtgaattgaaaaaaaatagagtg 9184474  T
Q  534 tgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||| |||||| |||||||  || |||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||    
T  9184475 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatgataaaaataatagta 9184566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 25477247 - 25477437
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| |||||| || | |||||| |  |||||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  25477247 gttggaacattagtgtgatgttgaaaaataaattggaagattaaacatcaaataattatactttgatttaatgttgtgcgaattaaaaaaatagagtgtg 25477346  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  |||  | ||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25477347 gtggtcttacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 25477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 24536974 - 24537171
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgtt-------gtgtgaattgaaaaaata 528  Q
    ||||||||||| |||| |||||||||||||||||| |  |||||||||||| |||| || |||||||||||||||       ||||||||||||||||||    
T  24536974 gttggaacattggtgttatgttggaagaaaaattggaagattaaacaccaattaatcattctttgatctaatgtttaatgttgtgtgaattgaaaaaata 24537073  T
Q  529 gagtgtgggagtcccaaataaaataagacaca--cattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||| |||||| ||||||||  |||||  ||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||    
T  24537074 gagtgtgggggtcccacataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatgataaaaataatagta 24537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 437 - 595
Target Start/End: Original strand, 20101609 - 20101769
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgg 536  Q
    |||||| ||| |||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20101609 ttggaaaattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtcg 20101708  T
Q  537 gagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaatttta 595  Q
    | || ||| |||||||  || | ||||||||||||| |||||||| | |||||||||||||    
T  20101709 gggttccacataaaatagaacatacacattagtagtatttaaattactgtatttaatttta 20101769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 42925673 - 42925819
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||  |||||||  |||||||||||||||||||    
T  42925673 attaaacaccaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacacacattagtagtgttt 42925772  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||| |   ||||||||||||||||  |||||||||| |||||||||    
T  42925773 aaatagtgatatttaattttaaatacctgataatgatgaaaataata 42925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 436 - 553
Target Start/End: Original strand, 1933967 - 1934084
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1933967 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtggg 1934066  T
Q  536 ggagtcccaaataaaata 553  Q
    |  |||||| ||||||||    
T  1934067 gaggtcccacataaaata 1934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 475 - 617
Target Start/End: Complemental strand, 31329161 - 31329017
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||  ||||||  || | |||| ||||||||||    
T  31329161 attaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgttagtagtgt 31329062  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaat 617  Q
    |||||| |  |||||||||||||||||  |||||||||| |||||    
T  31329061 ttaaatagtggtatttaattttaaatacatgataatgatgaaaat 31329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 475 - 617
Target Start/End: Complemental strand, 31335882 - 31335738
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||  ||||||  || | |||| ||||||||||    
T  31335882 attaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgttagtagtgt 31335783  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaat 617  Q
    |||||| |  |||||||||||||||||  |||||||||| |||||    
T  31335782 ttaaatagtggtatttaattttaaatacatgataatgatgaaaat 31335738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 518 - 624
Target Start/End: Original strand, 40846622 - 40846730
Alignment:
Q  518 ttgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaa 615  Q
    ||||||||||||||||||||  ||||| ||||||||  | |||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||||    
T  40846622 ttgaaaaaatagagtgtggggatcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataataataaaa 40846721  T
Q  616 ataatagta 624  Q
    |||||||||    
T  40846722 ataatagta 40846730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 514 - 624
Target Start/End: Original strand, 25637801 - 25637912
Alignment:
Q  514 tgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaa-ttttaaatatttgataatgata 612  Q
    |||||||||||| |||||  || | |||||| ||||||||  |||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||    
T  25637801 tgaattgaaaaattagagattgtgggtcccacataaaatagaacacacattagtagtgtttaaactgcggtatttaatttttaaatacttgataatgata 25637900  T
Q  613 aaaataatagta 624  Q
    ||||||||||||    
T  25637901 aaaataatagta 25637912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 28604184 - 28604037
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| || | |||||| |||||||  |  ||||| ||||  |||||    
T  28604184 attaaacaccaagtaattaaattttgatctagtgttgtgtgaattgaaaaaatagagtatgcg-gtcccacataaaatagattacacagattatcagtgt 28604086  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||| |   ||||||||||||||||  |||||||||| |||||||||    
T  28604085 ttaaatagtgatatttaattttaaatacatgataatgatgaaaataata 28604037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 34495181 - 34495253
Alignment:
Q  551 ataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagt 623  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34495181 ataacacacatattattagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagt 34495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 468 - 615
Target Start/End: Original strand, 15446273 - 15446422
Alignment:
Q  468 ttgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacatta 565  Q
    ||||| |||||| ||| ||||||| | |||||||  || |||  ||||||||||||||||||||||| || |||||| |||||||  || ||| ||||||    
T  15446273 ttgaaaaattaagcacaaagtaataagactttgaggtagtgtaatgtgaattgaaaaaatagagtgttgg-gtcccacataaaatagaacacatacatta 15446371  T
Q  566 gtagtgtttaaattgcagtatttaa-ttttaaatatttgataatgataaaa 615  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||| |||||    
T  15446372 gtagtgtttaaattgtggtatttaatttttaaatacttgataatggtaaaa 15446422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 479 - 620
Target Start/End: Original strand, 44630448 - 44630592
Alignment:
Q  479 aacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaata--agacacacattagtagtgttta 575  Q
    |||||||| | |||| | ||||||||| |||||||||||||||||||| ||||   |||  |||||| ||||||||  | ||||||||||||| ||||||    
T  44630448 aacaccaatttattaaattttgatctagtgttgtgtgaattgaaaaaaatagaacttggaggtcccacataaaatagaacacacacattagtattgttta 44630547  T
Q  576 aattgcagtatttaattttaaatatttgataatgataaaaataat 620  Q
    ||| |  || ||||||||||||||  |||||||||||| ||||||    
T  44630548 aatagtggtgtttaattttaaatacctgataatgataataataat 44630592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 556 - 624
Target Start/End: Original strand, 12001979 - 12002053
Alignment:
Q  556 acacacattagtagtgtttaaattgcagtatttaattttaaatat------ttgataatgataaaaataatagta 624  Q
    ||||||||||||||||||| ||||||  ||||||||||| |||||      ||||||||||||||||||||||||    
T  12001979 acacacattagtagtgtttgaattgcgatatttaatttttaatatttgtaattgataatgataaaaataatagta 12002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 624
Target Start/End: Complemental strand, 32080474 - 32080324
Alignment:
Q  478 aaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaataagacacacat--tagtagtgttt 574  Q
    ||||||||||| || | ||||||| | ||| |||||||||||||||||| |||||| |||  |||||| ||||||||  ||||||||  || |||| |||    
T  32080474 aaacaccaagtcatgagactttgaaccaatattgtgtgaattgaaaaaaatagagtttggaggtcccacataaaatagaacacacatattaatagtattt 32080375  T
Q  575 aaattgcagtatttaattttaaa-tatttgataatgataaaaataatagta 624  Q
    | |||    ||||||||||| || ||  |||||||||||||||||||||||    
T  32080374 atattatgatatttaatttttaagtacctgataatgataaaaataatagta 32080324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 40846479 - 40846537
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattat 494  Q
    ||||||||||| |||| |||||||||||||||||| |  |||||||||||| |||||||    
T  40846479 gttggaacattggtgtgatgttggaagaaaaattggaagattaaacaccaaataattat 40846537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 1934098 - 1934139
Alignment:
Q  583 gtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  1934098 gtatttaattttaaatacttgatagtgataaaaataatagta 1934139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 7e-66; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 1808588 - 1808399
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1808588 gttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgtg 1808489  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1808488 gg-gtcccatataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagta 1808399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 444 - 624
Target Start/End: Original strand, 38181248 - 38181430
Alignment:
Q  444 attagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtccc 543  Q
    ||||||||  ||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  38181248 attagtgtgttgttggaagaaaaattggaacattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgagagtccc 38181347  T
Q  544 aaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    | |||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  38181348 acataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 38181430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 40124852 - 40125042
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40124852 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 40124951  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  40124952 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 40125042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 28559075 - 28559264
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||| |||  ||||||||| |||||||||||| |  |||||||||||| || ||||||||| ||||||||||||||  || ||||||||||||||||    
T  28559075 gttggaaaattgatgtaatgttcgaagaaaaattggaagattaaacaccaaata-ttatactttaatctaatgttgtgtacatggaaaaaatagagtgtg 28559173  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  |||||| ||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28559174 gaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatgataaaaataatagta 28559264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 44924879 - 44925069
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | |||||| |  ||||||||| ||  ||||||||||||||||||| ||||||||||||||||| |||||| ||    
T  44924879 gttggaacattagtgtgatgttggaaaataaattggaagattaaacactaatcaattatactttgatctaatcttgtgtgaattgaaaaattagagtttg 44924978  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  |||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  44924979 gaggtcccacataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataacagta 44925069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 449 - 624
Target Start/End: Complemental strand, 26780228 - 26780052
Alignment:
Q  449 tgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaata 548  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||||||| | || |||||||||||||||||||||  ||||||||||| |||||| |||    
T  26780228 tgtaatgttggaagaaaaattaaaagattaaacactaagtaattatactctaatttaatgttgtgtgaattgaaaac-tagagtgtgggtgtcccacata 26780130  T
Q  549 aaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||  | |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  26780129 aaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaacaatagta 26780052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 1909905 - 1910096
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||| | ||||||||| | |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1909905 gttggaacattagtatgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 1910004  T
Q  536 ggagtcccaaataaaata-ag-acacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgat-aaaaataatagta 624  Q
    |  |||||| || ||||| ||  |||||||||||||||||||||  |  ||||||||||||||||| ||||||||||| |||||||||||||    
T  1910005 gatgtcccacatgaaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatgataaaaaataatagta 1910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 448 - 624
Target Start/End: Complemental strand, 2966711 - 2966533
Alignment:
Q  448 gtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaat 547  Q
    |||| |||||||||||||||||| |  |||||||| ||| |||||||| ||| |||||||||| || ||||||||||||||||||||| | |||||| ||    
T  2966711 gtgtgatgttggaagaaaaattggaagattaaacatcaaataattatatttttatctaatgttatgggaattgaaaaaatagagtgtgagggtcccatat 2966612  T
Q  548 aaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||  || |||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||||    
T  2966611 aaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatgataaaaattatagta 2966533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 438 - 624
Target Start/End: Original strand, 28564258 - 28564443
Alignment:
Q  438 tggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggg 537  Q
    |||||||||  | |||||||||||||||||||| |  |||||||||||| || ||||||||||||||||||||||||  |||||||||||||  |||||     
T  28564258 tggaacattcatataatgttggaagaaaaattggaagattaaacaccaaata-ttatactttgatctaatgttgtgtacattgaaaaaatag--tgtgga 28564354  T
Q  538 agtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
     || ||| ||||||||  | |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28564355 ggttccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatgataaaaataatagta 28564443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 453 - 624
Target Start/End: Original strand, 18875360 - 18875533
Alignment:
Q  453 atgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat 552  Q
    |||||||||||||||||| |  |||||| ||  |||||||| | ||||||||||||||||||||||||||||||||| |||| || |||||| ||| |||    
T  18875360 atgttggaagaaaaattggaagattaaatactgagtaattaaattttgatctaatgttgtgtgaattgaaaaaatagtgtgtaggggtcccacatacaat 18875459  T
Q  553 aagacacacat--tagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  ||||||||  |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  18875460 agaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatgatacaaataatagta 18875533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 438 - 624
Target Start/End: Original strand, 15950528 - 15950723
Alignment:
Q  438 tggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaat----tatactttgatctaatgttgtgtgaattgaaaaaatagagtg 533  Q
    |||||||||  ||| |||||||| ||||||||| |  | |||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  15950528 tggaacattgatgtgatgttggatgaaaaattggaagactaaacaccaagtaattaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 15950627  T
Q  534 tgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgata---atgataaaaataatagta 624  Q
    |||  || ||| |||||||  || |||||||||| ||||||||||||||| ||||||||||||||||| ||||||   ||||||||||||||||||    
T  15950628 tggaggtgccacataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgatgataaaaataatagta 15950723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 484 - 581
Target Start/End: Complemental strand, 17021345 - 17021247
Alignment:
Q  484 caagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgc 581  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  || ||||||||||||||||||||||||||    
T  17021345 caagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggg-gtcccacataaaatagaacacacacattagtagtgtttaaattgc 17021247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 484 - 581
Target Start/End: Complemental strand, 17551782 - 17551684
Alignment:
Q  484 caagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgc 581  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  || ||||||||||||||||||||||||||    
T  17551782 caagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggg-gtcccacataaaatagaacacacacattagtagtgtttaaattgc 17551684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 464 - 621
Target Start/End: Complemental strand, 7002755 - 7002594
Alignment:
Q  464 aaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacac 561  Q
    |||||||||  ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||  || || |||||||  || ||| ||    
T  7002755 aaaattgaaagattaaacaccaagtaattagactttgatctagtattgtgtgaattgaaaaaatagagtgtggggatctcacataaaatagaatacatac 7002656  T
Q  562 attagtagtgtttaaattgcagtatttaattt--taaatatttgataatgataaaaataata 621  Q
    |||||||||||||||||||  |||||||||||  ||||||   ||||| |||||||||||||    
T  7002655 attagtagtgtttaaattgtggtatttaattttctaaatacccgataaagataaaaataata 7002594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 509 - 624
Target Start/End: Complemental strand, 33417595 - 33417478
Alignment:
Q  509 ttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgata 606  Q
    ||||||||||||||||||||||||||  | ||| || ||||||||  | |||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  33417595 ttgtgtgaattgaaaaaatagagtgtatgggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 33417496  T
Q  607 atgataaaaataatagta 624  Q
    ||||||||||||||||||    
T  33417495 atgataaaaataatagta 33417478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 23547569 - 23547752
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| || |||||||| |||||||||||||  ||||||||   | |||||||| ||| |||||||||||  ||||| ||||||||||| | |     
T  23547569 gttggaacattggtttaatgttgaaagaaaaattgaaagattaaacattgaataattatattttaatctaatgttgcatgaatcgaaaaaatagaatatc 23547668  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || ||| || ||||| ||  ||||| |||| |     ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  23547669 ggggtctcacataaattagaacacatattaat-----ttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 23547752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 495 - 621
Target Start/End: Original strand, 17953164 - 17953290
Alignment:
Q  495 actttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaatt 592  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || ||| | |||||  || |||||||| |||||||||| ||| |  |||||| |||    
T  17953164 actttgatctagtgttgtgtgaattgaaaaaatagagtgtggg-gtaccacaaaaaatagaacacacacatcagtagtgttt-aatagtggtattttatt 17953261  T
Q  593 ttaaatatttgataatgataaaaataata 621  Q
    ||||||   |||| |||||||||||||||    
T  17953262 ttaaatgcctgattatgataaaaataata 17953290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 517 - 619
Target Start/End: Complemental strand, 33100644 - 33100541
Alignment:
Q  517 attgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaa-ttttaaatatttgataatgataaaa 615  Q
    ||||||||||||||| | |   |||||| ||||||||  | |||||||| || | ||||||||||||||||||| ||||||||| ||||||||||||| |    
T  33100644 attgaaaaaatagagagcgaaggtcccacataaaatagaatacacattaataatctttaaattgcagtatttaatttttaaatacttgataatgataaca 33100545  T
Q  616 ataa 619  Q
    ||||    
T  33100544 ataa 33100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 580
Target Start/End: Complemental strand, 17798124 - 17798041
Alignment:
Q  497 tttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtttaaattg 580  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||| ||| ||||| ||   |||| ||||||| |||| ||||||    
T  17798124 tttgatctagtgttgtgtgaattgaaaaaatatagtgtggaagtaccacataaattagagcacatattagtaatgttcaaattg 17798041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 621
Target Start/End: Complemental strand, 17027130 - 17027092
Alignment:
Q  583 gtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  17027130 gtatttaattttaaatacttgataatcataaaaataata 17027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 536
Target Start/End: Complemental strand, 17027224 - 17027130
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaa-ttgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 534  Q
    |||||||||||| ||| |||||||| |||||| ||| |  |||||||||||| |||||||| ||      |||||||||||||||||||||||||| |||    
T  17027224 gttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattatattt------aatgttgtgtgaattgaaaaaatagattgt 17027132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 621
Target Start/End: Complemental strand, 17557622 - 17557584
Alignment:
Q  583 gtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  17557622 gtatttaattttaaatacttgataatcataaaaataata 17557584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 536
Target Start/End: Complemental strand, 17557716 - 17557622
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaa-ttgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 534  Q
    |||||||||||| ||| |||||||| |||||| ||| |  |||||||||||| |||||||| ||      |||||||||||||||||||||||||| |||    
T  17557716 gttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattatattt------aatgttgtgtgaattgaaaaaatagattgt 17557624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 7e-66; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 37247757 - 37247947
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37247757 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 37247856  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  37247857 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 37247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 6154390 - 6154580
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6154390 gttggaacattgatgtgatgttggatgaaaaattggaaaattaaacatcaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgtg 6154489  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  6154490 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 6154580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 26668416 - 26668226
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26668416 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 26668317  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  26668316 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 26668226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 26940013 - 26939823
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26940013 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 26939914  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  26939913 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 26939823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 436 - 617
Target Start/End: Complemental strand, 7452893 - 7452710
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7452893 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactctgatctaatgttgtgtgaattgaaaaaatagagtgtg 7452794  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaat 617  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  7452793 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaat 7452710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 10759320 - 10759509
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | |||||| |  ||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||     
T  10759320 gttggaacattagtgtgatgttggaaaataaattggaagattaaacac-aagtaattatattttgatttaatgttgtgtgaattaaaaaaatagagtgta 10759418  T
Q  536 ggagtcccaaataaaataagaca--cacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10759419 ggggtcccacataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagta 10759509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 29166931 - 29167121
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29166931 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgtg 29167030  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
     | |||| | |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||    
T  29167031 agggtcctacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaacaatagta 29167121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 436 - 621
Target Start/End: Complemental strand, 36424776 - 36424589
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| ||||||||  |||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36424776 gttggaacattgatgtgatgttggataaaaaattggaagattaaacaccaagtaattatactatgatctaatgttgtgtgaattgaaaaaatagagtgtg 36424677  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    || ||| || |||||||  || |||||||||||||||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||    
T  36424676 ggggtctcacataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatgataaaaataata 36424589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 37646013 - 37646205
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| ||| | || ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37646013 gttggaacattgatgtgatgcttgatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 37646112  T
Q  536 ggagtcccaaataaaata----agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||    | ||||| |||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  37646113 ggggtcccacataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 37646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 12104183 - 12104002
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| |||||||||||||||||  |  || |||||||||||||||||||||||||||||||||||||         |||||||| |||    
T  12104183 gttggaacattagtgtgatgttggaagaaaaattagaagatgaaacaccaagtaattatactttgatctaatgttgtgt---------aaatagagagtg 12104093  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  12104092 ggggtcccacataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 12104002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 36430654 - 36430466
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||| | |  ||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  36430654 gttggaacattgatgtgatgttggatgaaaaattggaagattaaatatc--gtaattatattttaatctaatgttgtgtgaattgaaaaaatagagtgtg 36430557  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  | ||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||    
T  36430556 ggggtcccacataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatgataaaaataatagta 36430466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 475 - 624
Target Start/End: Original strand, 37536934 - 37537086
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata----agacacacattagtagt 570  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||    | ||||| |||||||||    
T  37536934 attaaacatcaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgtggg-gtcccacataaaatagaacacacacatattagtagt 37537032  T
Q  571 gtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  37537033 gtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 37537086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 20180113 - 20180298
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| ||| ||| |||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||    
T  20180113 gttggaacattggtgtgatgctggtagaaaaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgagaaaataggatgtg 20180212  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||  |||| |||||||  || |||||||||||||||||||||||| | |||||||||||||||   ||||||||||||||||||||||||    
T  20180213 gga--cccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaa---ttgataatgataaaaataatagta 20180298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 39519523 - 39519343
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39519523 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 39519424  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  ||||||||  |||||||          ||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  39519423 ggggtcccgcataaaatagaacacaca--------cattaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 39519343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 489 - 602
Target Start/End: Original strand, 6511614 - 6511729
Alignment:
Q  489 aattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtat 586  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||  ||  ||||||||||||||||||||||||||||||    
T  6511614 aattatattttgatctaatgttgtgtgaattgaaaaaattaagtgtgggagtcccacataaaatagaactcacacattagtagtgtttaaattgcagtat 6511713  T
Q  587 ttaattttaaatattt 602  Q
    ||||||||||||||||    
T  6511714 ttaattttaaatattt 6511729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 39524162 - 39523982
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39524162 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaaataaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 39524063  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || ||||   ||||||||  |||||||          ||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  39524062 ggggtccagcataaaatagaacacaca--------cattaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 39523982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 35678895 - 35679043
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||  || |||||||||||||||||    
T  35678895 attaaacatcaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtaagagtcccacataaaatagaacacacacattagtagtgt 35678994  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||| |  |||||| ||||||||||  ||||||||||  ||||||||    
T  35678995 ttaaatagtggtattttattttaaatacctgataatgatgcaaataata 35679043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 624
Target Start/End: Complemental strand, 17162955 - 17162804
Alignment:
Q  477 taaacaccaagt-aattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtt 573  Q
    |||||||||||| ||||| | | |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||  || |||||||||||| |||||    
T  17162955 taaacaccaagttaattagattatgatctaatgttgtatgaattgaaaaaatagaatgtgggagtcccacataaaatagaacacacacattagtggtgtt 17162856  T
Q  574 taaattgcagtatttaa-ttttaaatatttgataatgataaaaataatagta 624  Q
    |||||||  |||||||| |||||||||  |||||||||||||||||||||||    
T  17162855 taaattgaggtatttaatttttaaatacctgataatgataaaaataatagta 17162804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 448 - 574
Target Start/End: Original strand, 23757134 - 23757262
Alignment:
Q  448 gtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaat 547  Q
    |||| |||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| |     
T  23757134 gtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacac 23757233  T
Q  548 aaaat--aagacacacattagtagtgttt 574  Q
    |||||  || |||||||||| ||||||||    
T  23757234 aaaatagaacacacacattattagtgttt 23757262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 448 - 574
Target Start/End: Original strand, 23822590 - 23822718
Alignment:
Q  448 gtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaat 547  Q
    |||| |||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| |     
T  23822590 gtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacac 23822689  T
Q  548 aaaat--aagacacacattagtagtgttt 574  Q
    |||||  || |||||||||| ||||||||    
T  23822690 aaaatagaacacacacattattagtgttt 23822718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 624
Target Start/End: Complemental strand, 17159452 - 17159324
Alignment:
Q  499 tgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaa-tttta 595  Q
    ||||||| |||||| ||||||||||||||||| |||||| |||||| |||||||  |||||||||||||||||||||| |||||  |||||||| |||||    
T  17159452 tgatctagtgttgtatgaattgaaaaaatagaatgtgggtgtcccacataaaatagaagacacacattagtagtgttttaattgaggtatttaattttta 17159353  T
Q  596 aatatttgataatgataaaaataatagta 624  Q
    ||||  |||||||||||||||||||||||    
T  17159352 aatacctgataatgataaaaataatagta 17159324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 436 - 526
Target Start/End: Complemental strand, 40150333 - 40150243
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa 526  Q
    |||||||||||||||| |||||| || | |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40150333 gttggaacattagtgtgatgttgaaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa 40150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 475 - 624
Target Start/End: Complemental strand, 23689170 - 23689019
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgt 572  Q
    ||||||||||||  ||||| ||||||||||| || | |||| ||||||||||| |||||||||  ||||| ||||||||  | ||||||||| |||||||    
T  23689170 attaaacaccaaacaattagactttgatctagtgatttgtggattgaaaaaattgagtgtggggatcccacataaaatagaacacacacattcgtagtgt 23689071  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    | ||||||  |||||||||||||||||  | |||||| ||||||||||||||    
T  23689070 taaaattgtggtatttaattttaaataccttataatggtaaaaataatagta 23689019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 518 - 618
Target Start/End: Complemental strand, 40148897 - 40148797
Alignment:
Q  518 ttgaaaaaatagagtgtgggagtcccaaataaaataagaca--cacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaa 615  Q
    ||||||||||||||||||||  ||||| ||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  40148897 ttgaaaaaatagagtgtggg--tcccacataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaa 40148800  T
Q  616 ata 618  Q
    |||    
T  40148799 ata 40148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 599
Target Start/End: Complemental strand, 4872981 - 4872855
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||| | |||| |||||||| || ||||||||||||||||||||||||||||||| || ||| |||||||  || ||||||| |||||||||    
T  4872981 attaaacaccaaattattaaactttgatttagtgttgtgtgaattgaaaaaatagagtgtgggggttccatataaaatagaacacacacaatagtagtgt 4872882  T
Q  573 ttaaattgcagtatttaattttaaata 599  Q
    |||||| |   ||||||||||||||||    
T  4872881 ttaaatagtgatatttaattttaaata 4872855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 504 - 624
Target Start/End: Original strand, 40567628 - 40567750
Alignment:
Q  504 taatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacaca--ttagtagtgtttaaattgcagtatttaattttaaatatt 601  Q
    |||||| ||||||||| |||||||| | |||||| || ||| ||||||||| |||||||  ||||||||| ||||||||  ||||||||||||||||||     
T  40567628 taatgtggtgtgaattaaaaaaatataatgtgggggtaccatataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaatatc 40567727  T
Q  602 tgataatgataaaaataatagta 624  Q
    | |||||||||||||||||||||    
T  40567728 ttataatgataaaaataatagta 40567750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 9725770 - 9725912
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattg-aaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtt 573  Q
    |||||||||||||| |||| |||||||| || |||||||||||||| ||||||||||||||||  |||||| ||||||||  |||||||     ||||||    
T  9725770 attaaacaccaagttattaaactttgatatagtgttgtgtgaattgaaaaaaatagagtgtggatgtcccacataaaatagaacacaca-----agtgtt 9725864  T
Q  574 taaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||| |  |||||||||||||||||   ||||||||| || ||||||    
T  9725865 taaatagtggtatttaattttaaataccggataatgatgaagataata 9725912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 624
Target Start/End: Complemental strand, 15149740 - 15149613
Alignment:
Q  495 actttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaatttt 594  Q
    |||||||| ||| ||||| |||||| |||||| | ||||||||  ||| | ||||||||  |||||||||| |||||||||||||    |||||||||||    
T  15149740 actttgat-taacgttgtatgaatttaaaaaaaaaagtgtggg--tcctatataaaatagaacacacattaatagtgtttaaattaagatatttaatttt 15149644  T
Q  595 aa-atatttgataatgataaaaataatagta 624  Q
     | |||| |||||||||||||||||||||||    
T  15149643 tagatatctgataatgataaaaataatagta 15149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 535
Target Start/End: Original strand, 22832503 - 22832563
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||||| ||||| | | |||| || |||||||||||||||||||||||||||||    
T  22832503 attaaacaccaaggaattagattatgatttagtgttgtgtgaattgaaaaaatagagtgtg 22832563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 587 - 624
Target Start/End: Original strand, 6511740 - 6511777
Alignment:
Q  587 ttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6511740 ttaattttaaatacttgataatgataaaaataatagta 6511777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 556 - 611
Target Start/End: Original strand, 16115309 - 16115364
Alignment:
Q  556 acacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgat 611  Q
    ||||||||||||| |||||||||| | || |||||||||||||| ||| |||||||    
T  16115309 acacacattagtaatgtttaaattacggtgtttaattttaaatacttgctaatgat 16115364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 7e-66; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 10136463 - 10136273
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10136463 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 10136364  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  10136363 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 10136273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 25844894 - 25844704
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25844894 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 25844795  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  25844794 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 25844704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 479 - 624
Target Start/End: Original strand, 51040522 - 51040669
Alignment:
Q  479 aacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaa 576  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||  || |||||||||||||||||||||    
T  51040522 aacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccacatgaaatagaacacacacattagtagtgtttaa 51040621  T
Q  577 attgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||   |||||||||||||||| ||||||||||||||||||||||||    
T  51040622 attgtgttatttaattttaaatacttgataatgataaaaataatagta 51040669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 437 - 624
Target Start/End: Original strand, 16648591 - 16648778
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt-g 535  Q
    ||||||||||||||| || |||||| | |||||  |  |||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  16648591 ttggaacattagtgtgattttggaaaataaattagaagattaaacac---gtaattatactttgatctaatgttgtgtaaattgaaaaaatagagtgtag 16648687  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16648688 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 16648778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 475 - 624
Target Start/End: Complemental strand, 38622288 - 38622137
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||  |||| |||||||||||    
T  38622288 attaaaaatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccacataaaatagaactcacatattagtagtgt 38622189  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||| |||||||||| ||||| |||| ||||||||||||||||||||||||    
T  38622188 ttaaaatgcagtatttgattttgaatacttgataatgataaaaataatagta 38622137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 23191836 - 23191982
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || | || | || |||||||||||||||||||    
T  23191836 attaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcacataaaatagaacacacacattagtagtgttt 23191935  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    || | |  |||||||||||||||||  ||||||||||||||||||||    
T  23191936 aagtagtggtatttaattttaaatacctgataatgataaaaataata 23191982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 16036705 - 16036557
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||  || |||||||||||||||||    
T  16036705 attaaacaccaagtaactaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattagtagtgt 16036606  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||| |  |||||||| ||||||||  |||||||||| |||||||||    
T  16036605 ttaaatagtggtatttaaatttaaatacctgataatgatgaaaataata 16036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 40167039 - 40166891
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||||| |||| ||||||||||| | |||||||||||||||||||||| ||| || ||||||||||||||  ||||||||||| ||||||||    
T  40167039 attaaacaccaagttattaaactttgatctagtattgtgtgaattgaaaaaatagaatgtaggggtcccaaataaaatagaagacacacatcagtagtgt 40166940  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||  |  |||||||||||||||||  ||||||||||||||||||||    
T  40166939 ttaaacagtggtatttaattttaaatacctgataatgataaaaataata 40166891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 474 - 624
Target Start/End: Original strand, 19797990 - 19798143
Alignment:
Q  474 aattaaacaccaagtaattatactttgatctaatgttgtgtgaattg-aaaaaatagagtgt-gggagtcccaaataaaat--aagacacacattagtag 569  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| ||||| ||| |||||| |||||||  ||  | || ||||||||    
T  19797990 aattaaataccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaaataaagtgtggggggtcccacataaaatagaactcgcatattagtag 19798088  T
Q  570 tgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  19798089 tgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 19798143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 26926687 - 26926868
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||||||||||||||          |||    
T  26926687 gttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaactaattatactttgatttaatgttgtgtgaattgaa----------gtg 26926776  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtg-tttaaattgcagtatttaa-ttttaaatatttgataatgataaaaataatagta 624  Q
    ||| ||||| |||||||  || |||||||||||||||| |||||||||  |||||||| ||||||||| ||||||||||||||||||||||||    
T  26926777 gga-tcccacataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatgataaaaataatagta 26926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 495 - 624
Target Start/End: Complemental strand, 12261053 - 12260924
Alignment:
Q  495 actttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacac--attagtagtgtttaaattgcagtatttaatt 592  Q
    ||||||||||| | |||||| |||  ||||||||||||||||| |||||| ||||||||  ||||||  ||||||||||||||||| |  ||||||||||    
T  12261053 actttgatctagtattgtgttaata-aaaaaatagagtgtggg-gtcccacataaaatagaacacactcattagtagtgtttaaatagtggtatttaatt 12260956  T
Q  593 ttaaatatttgataatgataaaaataatagta 624  Q
    ||||||| ||||||||||||||||||||||||    
T  12260955 ttaaatacttgataatgataaaaataatagta 12260924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 507 - 621
Target Start/End: Complemental strand, 11807286 - 11807170
Alignment:
Q  507 tgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttga 604  Q
    ||||||||||||||||||||||||||| ||   | ||| ||||||||  | ||||||||||| |||||||||||||  |||||||| |||||||| ||||    
T  11807286 tgttgtgtgaattgaaaaaatagagtgcggagattccacataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttga 11807187  T
Q  605 taatgataaaaataata 621  Q
    |||||||||||| ||||    
T  11807186 taatgataaaaacaata 11807170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 622
Target Start/End: Original strand, 39199805 - 39199917
Alignment:
Q  516 aattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgt----ttaaattgcagtatttaattttaaatatttgataatg 609  Q
    |||||||||||||||||||||  |||||| ||||||||  | |||||||||| ||||||    ||||||||||||||||| ||||||||| || ||||||    
T  39199805 aattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatg 39199904  T
Q  610 ataaaaataatag 622  Q
    |||||||||||||    
T  39199905 ataaaaataatag 39199917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 39586079 - 39586223
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    |||||| | ||||| |||| |||||||| || | |||||| |||||||||||||||||||||  |||||| ||||||||  ||| |||||| || |||||    
T  39586079 attaaagatcaagttattaaactttgatatagtattgtgt-aattgaaaaaatagagtgtggaggtcccacataaaatagaacaaacattaata-tgttt 39586176  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||| |   ||||||||||||||||  ||||||||||||||||||||    
T  39586177 aaatagtgatatttaattttaaatacctgataatgataaaaataata 39586223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 624
Target Start/End: Complemental strand, 10141098 - 10141041
Alignment:
Q  567 tagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  10141098 tagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 10141041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 524
Target Start/End: Original strand, 5100133 - 5100220
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaa 524  Q
    |||| ||||||||||| ||||||||| | |||||| |  ||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  5100133 gttgtaacattagtgtgatgttggaaaataaattggaagattaaacac-aagtaattatactttaatctaatgttatgtgaattgaaaa 5100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 621
Target Start/End: Original strand, 47450279 - 47450338
Alignment:
Q  562 attagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||||||||||||| |||  |||||||||||||||| |||||||||||||||||||||    
T  47450279 attagtagtgtttaaactgcgttatttaattttaaatacttgataatgataaaaataata 47450338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 532
Target Start/End: Complemental strand, 8138727 - 8138634
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagt 532  Q
    |||||||||||  ||| || ||||||||||||||| |  ||||||    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8138727 gttggaacattgatgtgatcttggaagaaaaattggaagattaaa---taagtaattatactttgatataatattgtgtgaattgaaaaaatagagt 8138634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 578
Target Start/End: Complemental strand, 46697400 - 46697309
Alignment:
Q  487 gtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaa--ataagacacacattagtagtgtttaaat 578  Q
    ||||||| |||||||| || |||||||||||||||||||||||||| |||  |||||| |||||  |||| ||| ||||||||| |||||||||    
T  46697400 gtaattagactttgatttagtgttgtgtgaattgaaaaaatagagtatgg--gtcccacataaaatataacacatacattagtaatgtttaaat 46697309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 4931361 - 4931171
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4931361 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgtg 4931262  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  4931261 ggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 4931171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 21672342 - 21672153
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| |||||||||||||||||| |  | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21672342 gttggaacattggtgtgatgttggaagaaaaattggaagaataaacaccaagtaattatactttgatctaacgttgtgtgaattgaaaaaatagaatgtg 21672243  T
Q  536 ggagtcccaaataaaata-ag-acacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| ||||| |||||||| || ||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  21672242 gga-tcccacataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatgataaaaataatagta 21672153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 436 - 621
Target Start/End: Complemental strand, 3046711 - 3046525
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||| |||||| |||| ||||||||||||||||||||  ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||  ||||||    
T  3046711 gttgaaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattataatttgatataaagttgtgtgaattgaaaaaattaagtgtg 3046612  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    || |||||| |||||||  || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  3046611 gg-gtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataata 3046525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 437 - 624
Target Start/End: Original strand, 42625538 - 42625731
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgg 536  Q
    ||||||||||||||| || ||| || | |||||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42625538 ttggaacattagtgtgat-ttgaaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtgg 42625636  T
Q  537 gagtcccaaataaaat--aagacacacattagtagtgtttaaat-----tgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    | |||||| |||||||  ||  ||||||||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42625637 gggtcccacataaaatagaactcacacattagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatgataaaaataatagta 42625731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 12257159 - 12256970
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||||||| |||| ||||||||| | || ||| |  ||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12257159 gttggaacattggtgtgatgttggaatagaatttggaagattaatcaccaaataattatactttgatttaatgttgtgtaaattgaaaaaatagagtgtg 12257060  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  12257059 gg-gtcccacataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 12256970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 453 - 624
Target Start/End: Complemental strand, 3881092 - 3880916
Alignment:
Q  453 atgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat 552  Q
    |||||||||||||||||| |  |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| || |||||||    
T  3881092 atgttggaagaaaaattggaagattaaataccaagtaattatactttgatctaatattgcgtgaattgaaaaaatagagtgtgggggtctcacataaaat 3880993  T
Q  553 aagacaca-----cattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |  |||||     ||||||||||| ||||||||   |||||||||||||||| ||||||||||||||||||||||||    
T  3880992 agaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatgataaaaataatagta 3880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 26342343 - 26342155
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||| ||| |||||||| ||||||||  |  |||||| | |||||||||||||||| || |||| || ||||||||||||||||||  ||||    
T  26342343 gttggaacattaatgtgatgttggatgaaaaattcgaagattaaatatcaagtaattatactttaatttaatattatgtgaattgaaaaaatag--tgtg 26342246  T
Q  536 ggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| ||||||||  | |||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||    
T  26342245 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatgataaaaataatagta 26342155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 475 - 619
Target Start/End: Original strand, 23247556 - 23247701
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||  ||||||  || ||| |||||||||||||    
T  23247556 attaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtatg-gtcccacctaaaatagaaaacaaacattagtagtgt 23247654  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataa 619  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||    
T  23247655 ttaaattacggtatttaattttaaatacttgataatgataaaaataa 23247701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 436 - 616
Target Start/End: Original strand, 10392045 - 10392229
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattg--aaaaaatagagtg 533  Q
    ||||||||||| |||| | ||||| || ||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  10392045 gttggaacattggtgtgaagttgggaggaaaatcgaaagattaaacaccaagtaattatactttgatctagtgttgtgtgaattgaaaaaaaatagagtg 10392144  T
Q  534 tgggagtcccaaataaaataagacacaca--ttagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaa 616  Q
    || | | |||| ||||||||  |||||||  |||  |||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  10392145 tgagggccccacataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataataataaaaa 10392229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 436 - 553
Target Start/End: Complemental strand, 12802420 - 12802304
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||| | |||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12802420 gttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgaaaaaatagagtgtg 12802321  T
Q  536 ggagtcccaaataaaata 553  Q
    || |||||| ||||||||    
T  12802320 gg-gtcccacataaaata 12802304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 453 - 580
Target Start/End: Original strand, 44508271 - 44508400
Alignment:
Q  453 atgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat 552  Q
    |||||||| ||||||||| |  |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||    
T  44508271 atgttggatgaaaaattggaagattaaatatcaagtaattatactttgatctaatattgtgtgaattgaaaaaatagagtgtgggaatcccatataaaat 44508370  T
Q  553 --aagacacacattagtagtgtttaaattg 580  Q
      || ||||| |||||||||||||||||||    
T  44508371 agaacacacatattagtagtgtttaaattg 44508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 522 - 624
Target Start/End: Original strand, 12181796 - 12181900
Alignment:
Q  522 aaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataa 619  Q
    |||||||||||||||| |||||| ||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  12181796 aaaaatagagtgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataa 12181895  T
Q  620 tagta 624  Q
    |||||    
T  12181896 tagta 12181900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 439 - 568
Target Start/End: Complemental strand, 2595905 - 2595774
Alignment:
Q  439 ggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggga 538  Q
    ||||||||  |||||||||||||||||||||| |  |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||     
T  2595905 ggaacattgatgtaatgttggaagaaaaattggaagattaaacaccaaataattacactttaatctaatgttgtgtgaattgaaaaaatagagtgtgggt 2595806  T
Q  539 gtcccaaataaaat--aagacacacattagta 568  Q
     ||||| |||||||  || |||||||||||||    
T  2595805 atcccacataaaatagaacacacacattagta 2595774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 495 - 621
Target Start/End: Original strand, 13313331 - 13313459
Alignment:
Q  495 actttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaatt 592  Q
    |||||||| || | ||||||||||||||||||||||||||||  |||||| ||||||||  | ||||||||||||||||||||||| |  ||||||||||    
T  13313331 actttgatttagtattgtgtgaattgaaaaaatagagtgtggatgtcccacataaaatagaacacacacattagtagtgtttaaatagtggtatttaatt 13313430  T
Q  593 ttaaatatttgataatgataaaaataata 621  Q
    ||||||| ||||||||||| |||||||||    
T  13313431 ttaaatacttgataatgatgaaaataata 13313459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 475 - 580
Target Start/End: Original strand, 23151683 - 23151792
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata----agacacacattagtagt 570  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    | ||||| |||||||||    
T  23151683 attaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccgcataaaatagaacacacacatattagtagt 23151782  T
Q  571 gtttaaattg 580  Q
    ||||||||||    
T  23151783 gtttaaattg 23151792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 26286153 - 26286303
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaataga--gtgtgggagtcccaaataaaata--agacacacattagtagt 570  Q
    ||||||||||||||||||| ||||||||||| |||||| | ||||||||||| | |  ||||||| |||||| ||||||||  | |||||||||||||||    
T  26286153 attaaacaccaagtaattaaactttgatctagtgttgtataaattgaaaaaaaaaatagtgtgggggtcccacataaaatagaacacacacattagtagt 26286252  T
Q  571 gtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    |||||||| |  |||||||||||||||||  |||||||||| |||||||||    
T  26286253 gtttaaatagtggtatttaattttaaataactgataatgatgaaaataata 26286303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 624
Target Start/End: Complemental strand, 12800405 - 12800338
Alignment:
Q  557 cacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12800405 cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatgataaaaataatagta 12800338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 617
Target Start/End: Complemental strand, 4580554 - 4580420
Alignment:
Q  485 aagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgca 582  Q
    ||||||||| |||||||| || ||||||||||||| |||||||||||||| || |||||| |||||||  || |||||||||||||||||||| || |      
T  4580554 aagtaattaaactttgatttagtgttgtgtgaattaaaaaaatagagtgtaggggtcccatataaaatagaacacacacattagtagtgtttatatagtg 4580455  T
Q  583 gtatttaattttaaatatttgataatgataaaaat 617  Q
    |||||||||| ||||||  |||||||||| |||||    
T  4580454 gtatttaattctaaatacctgataatgatgaaaat 4580420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 485 - 624
Target Start/End: Complemental strand, 8269397 - 8269248
Alignment:
Q  485 aagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataaga----------cacacattagtagtgttt 574  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||| |||||| || |           | ||||||| |||||||    
T  8269397 aagtaattatactttgatctaatattgtgtgaattgaataaatagagtgtgagagttccacataaaaaaaaaaaaaagaacttatacattagaagtgttt 8269298  T
Q  575 aaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| |||  |||||||||||||||| ||||||||||||||||||||||||    
T  8269297 aaactgcgatatttaattttaaatacttgataatgataaaaataatagta 8269248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 478 - 614
Target Start/End: Original strand, 10387346 - 10387488
Alignment:
Q  478 aaacaccaagtaattatactttgatctaatgttgtgtgaat----tgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagta-gt 570  Q
    |||||||||||||||||||||||||||| ||||||||||||     ||||||| | ||| ||| ||||||| |||||||  || ||||| ||||| | ||    
T  10387346 aaacaccaagtaattatactttgatctagtgttgtgtgaatagaaagaaaaaaaaaagt-tggaagtcccatataaaatagaacacacatattagcaggt 10387444  T
Q  571 gtttaaattgcagtatttaattttaaatatttgataatgataaa 614  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  10387445 gtttaaattgtggtatttaattttaaatatttgataatgataaa 10387488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 547 - 623
Target Start/End: Complemental strand, 16373373 - 16373297
Alignment:
Q  547 taaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagt 623  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||    
T  16373373 taaaatataacacacattagtagtgtttaaattgcagtagttaattttaaatacctgataacgataaaaataatagt 16373297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 475 - 596
Target Start/End: Complemental strand, 30259361 - 30259238
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||| |||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||||  ||| |||||||  |  ||| |||||||||||||    
T  30259361 attaaataccaagtaattaaactttgatctagtgttttgtaaattgaaaaaatagagtgtgggagatccacataaaatagatcacatacattagtagtgt 30259262  T
Q  573 ttaaattgcagtatttaattttaa 596  Q
    |||||| |   |||||||||||||    
T  30259261 ttaaatagtgatatttaattttaa 30259238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 624
Target Start/End: Complemental strand, 15973819 - 15973669
Alignment:
Q  478 aaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgttta 575  Q
    ||||||||||| || | ||||||| ||| |||||||||||| ||||||||| |||||||  ||| || |||||||  || ||||||||||||||| ||||    
T  15973819 aaacaccaagtcatgaaactttgagctagtgttgtgtgaatcgaaaaaataaagtgtggaggtcgcacataaaatagaacacacacattagtagtattta 15973720  T
Q  576 aattgcagtattt--aattttaaatatttgataatgataaaaataatagta 624  Q
     |||   ||||||  | |||||||||   ||||||||||||||||||||||    
T  15973719 tattatggtattttaatttttaaataccggataatgataaaaataatagta 15973669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 623
Target Start/End: Original strand, 6590099 - 6590160
Alignment:
Q  562 attagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagt 623  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| | |||||||||||||    
T  6590099 attagtagtgtttaaattgtattatttaattttaaatacttgataaagctaaaaataatagt 6590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 440 - 621
Target Start/End: Original strand, 27246511 - 27246691
Alignment:
Q  440 gaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtggga 538  Q
    ||||||| |||||| |||||||||||| | ||| | |||||||| ||||||| | ||||||  ||| |||  |||||||| |||||| ||||| |  |      
T  27246511 gaacattggtgtaaagttggaagaaaattggaaga-ttaaacac-aagtaataagactttgggctagtgtgatgtgaattaaaaaaaatagagaggtgag 27246608  T
Q  539 gtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||| || ||||||||  |||||||||| |||||||||||||||  |||||| |  |||||| ||||||||||||||| |||||    
T  27246609 gtctcacataaaatagaacacacattaatagtgtttaaattgcgctatttattcataaatacttgataatgataaaactaata 27246691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 624
Target Start/End: Original strand, 9814959 - 9815024
Alignment:
Q  560 acattagtagtgtttaaattgcagtatttaa-ttttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||| |||||||||| |||||||| ||||||||| |||||||| || ||||||||||||    
T  9814959 acattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataatagta 9815024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 624
Target Start/End: Original strand, 10716884 - 10716949
Alignment:
Q  560 acattagtagtgtttaaattgcagtatttaa-ttttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||| |||||||||| |||||||| ||||||||| |||||||| || ||||||||||||    
T  10716884 acattagtagtttttaaattgcggtatttaatttttaaatacttgataataatgaaaataatagta 10716949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 574 - 619
Target Start/End: Original strand, 44508427 - 44508472
Alignment:
Q  574 taaattgcagtatttaattttaaatatttgataatgataaaaataa 619  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  44508427 taaattgtggtatttaattttaaatatttgataatgataaaaataa 44508472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 578
Target Start/End: Complemental strand, 10674732 - 10674634
Alignment:
Q  482 accaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaat 578  Q
    ||||| |||||| | |||||| || |||| ||||||||||||| |||||||| | ||||| |  |||||||  || |||||||||| ||||||||||||    
T  10674732 accaaataattagattttgatatagtgttttgtgaattgaaaagatagagtgcgagagtctcgtataaaatacaatacacacattaatagtgtttaaat 10674634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 585 - 621
Target Start/End: Original strand, 23152177 - 23152213
Alignment:
Q  585 atttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||||||||| | |||||||||||||||||||||    
T  23152177 atttaattttaaaaacttgataatgataaaaataata 23152213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 3e-59; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 16835119 - 16835310
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaatt-gaaaaaatagagtgt 534  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  16835119 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattaaaaaaaatagagtgt 16835218  T
Q  535 gggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| |||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  16835219 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 16835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 440 - 624
Target Start/End: Original strand, 17963520 - 17963706
Alignment:
Q  440 gaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggag 539  Q
    |||||||  ||| |||||||| ||||||||| |  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |    
T  17963520 gaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaactatactttgatctaatgatgtgtgaattgaaaaaatagagtgtggggg 17963619  T
Q  540 tcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||| |||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  17963620 tcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 17963706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 454 - 624
Target Start/End: Original strand, 6406836 - 6407008
Alignment:
Q  454 tgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat- 552  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||   |||||||     
T  6406836 tgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctattgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaata 6406935  T
Q  553 -aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
     || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  6406936 gaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 6407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 11569651 - 11569839
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| |||||| || | |||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11569651 gttggaacattagtgtgatgttgcaa-ataaattagaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 11569749  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || ||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  11569750 gg-gtcccacataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataatagta 11569839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 620
Target Start/End: Original strand, 11533660 - 11533845
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||  | |||||  |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  11533660 gttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaataaagtgtg 11533759  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataat 620  Q
    || |||||| |||||||  || ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11533760 gg-gtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 11533845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 620
Target Start/End: Original strand, 11559170 - 11559355
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||||||| ||||||||  | |||||  |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  11559170 gttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaatacagtgtg 11559269  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataat 620  Q
    || |||||| |||||||  || ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11559270 gg-gtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatgataaaaataat 11559355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 437 - 624
Target Start/End: Original strand, 20747256 - 20747445
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgg 536  Q
    |||||||||| |||| | ||| |||| ||||||| |  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20747256 ttggaacattggtgttaagtttgaaggaaaattggaagattaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgtgg 20747355  T
Q  537 gagtcccaaataaaataagac--acacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    | |||| | ||||||||  ||  |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||    
T  20747356 gggtcctacataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacgataaaaacaatagta 20747445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 454 - 624
Target Start/End: Complemental strand, 17600497 - 17600328
Alignment:
Q  454 tgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata 553  Q
    ||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  17600497 tgttggaagaaaaattggaagattaaacaccaagtaatcatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgagggtcccacataaaata 17600398  T
Q  554 agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
      ||||| |  | ||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  17600397 gaacaca-aacattagtgtttaaattgtggtatttaattttaaataattgataatgataaaaataacagta 17600328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 437 - 624
Target Start/End: Original strand, 19994344 - 19994532
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgg 536  Q
    ||||| |||| |||| |||||||||||||||||| |  ||||||||| | ||||||||||||| ||| |||||| |||||||| ||||||||||||||||    
T  19994344 ttggatcattggtgtgatgttggaagaaaaattggaagattaaacactaggtaattatactttaatcgaatgttatgtgaatt-aaaaaatagagtgtgg 19994442  T
Q  537 gagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    | ||||||  |||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  19994443 gggtcccacgtaaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatgataaaaataatagta 19994532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 2699072 - 2699263
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaa-atagagtgt 534  Q
    |||||||||| ||| | ||||||||| | |||||| |  |||||||| |||||||||||||||| |||||||||||||||||| | |||| |||||||||    
T  2699072 gttggaacatcagtatgatgttggaaaataaattggaagattaaacatcaagtaattatactttaatctaatgttgtgtgaatggtaaaatatagagtgt 2699171  T
Q  535 gggagtcccaaataaaataaga--cacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||| |||||| ||||||||  |  ||||||||||||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||||    
T  2699172 gggggtcccacataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataataaaaataatagta 2699263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 436 - 623
Target Start/End: Original strand, 11612862 - 11613050
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatacttt--gatctaatgttgtgtgaattgaaaaaatagagtg 533  Q
    ||||||||||| |||  |||||||||| ||||||||| |||||||||  |||||||||||||||  ||||||||||| | | ||||||||||||||||||    
T  11612862 gttggaacattggtg--atgttggaaggaaaattgaaaaattaaacat-aagtaattatactttttgatctaatgttatataaattgaaaaaatagagtg 11612958  T
Q  534 tgggagtcccaaataaaataagacac--acattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagt 623  Q
    | |  |||||| ||||||||| ||||  |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  11612959 ttgaggtcccacataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatgataaaaataatagt 11613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 453 - 624
Target Start/End: Original strand, 12405335 - 12405508
Alignment:
Q  453 atgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat 552  Q
    |||||||||||||||||| |  |||||||| ||| |||||||| |||||||||||||||||| |||| ||||||||||||||||   || ||||||||||    
T  12405335 atgttggaagaaaaattggaagattaaacatcaactaattatattttgatctaatgttgtgttaattaaaaaaatagagtgtggagatcacaaataaaat 12405434  T
Q  553 --aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
      || |||||||||||||||| ||||||||  ||| ||||||||||||| ||||||||||||||||||||||||    
T  12405435 agaacacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatgataaaaataatagta 12405508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 440 - 624
Target Start/End: Original strand, 33686606 - 33686791
Alignment:
Q  440 gaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggag 539  Q
    |||||||| ||| ||||||||| | |||||| |  |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  33686606 gaacattaatgtgatgttggaaaataaattggaagattaaacatcaaataattatactttgatctaattttgtgtgaattgaaaaaatagagtgtggg-g 33686704  T
Q  540 tcccaaataaaataagac--acacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    | ||| ||||||||| ||  ||| |||||||||||||||| ||  ||||||| ||||||||| ||| ||||||||||||||||||||    
T  33686705 ttccacataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatgataaaaataatagta 33686791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 474 - 621
Target Start/End: Complemental strand, 12690068 - 12689920
Alignment:
Q  474 aattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtg 571  Q
    ||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||  || ||||||||||||||||    
T  12690068 aattaaacaccaaattattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgt-ggagtcccacataaaatagaacacacacattagtagtg 12689970  T
Q  572 tttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||| || |||||||||||||||||  ||||| |||| |||||||||    
T  12689969 tttaaatagcggtatttaattttaaataactgatattgatgaaaataata 12689920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 440 - 610
Target Start/End: Original strand, 22694347 - 22694517
Alignment:
Q  440 gaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggag 539  Q
    ||||||| |||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||  |    
T  22694347 gaacattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatag--tttggagg 22694444  T
Q  540 tcccaaataaaata--agacacacat-tagtagtgtttaaattgcagtatttaattttaaatatttgataatga 610  Q
    ||||| ||||||||  | |||||||| ||| |||||||||||||| |||||||||| |||| | ||||||||||    
T  22694445 tcccacataaaatagaacacacacatctag-agtgtttaaattgccgtatttaattataaaaacttgataatga 22694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 22610608 - 22610463
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacaca--ttagtagtgt 572  Q
    |||||| |||||||||||| ||||||||||| ||||||||  |||||||||||||| ||||| ||| ||| ||||||||| |||||||  ||||||||||    
T  22610608 attaaataccaagtaattagactttgatctattgttgtgt--attgaaaaaatagattgtggcagttccacataaaataaaacacacacattagtagtgt 22610511  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataat 620  Q
    |||||||   ||||||||||||||||| ||||||||||||||||||||    
T  22610510 ttaaattttggtatttaattttaaatacttgataatgataaaaataat 22610463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 475 - 619
Target Start/End: Original strand, 12797779 - 12797929
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaata------agacacacattagta 568  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||      | ||||||| |||||    
T  12797779 attaaacaccaagtaattagactttgatctagtgttgtgtgaattgaaaaaatagagtgtgtgggtcccacataaaatagaaaacacacacacactagta 12797878  T
Q  569 gtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataa 619  Q
    |||||||||| |  ||||||||||||||||| |||| || |||||||||||    
T  12797879 gtgtttaaatagtggtatttaattttaaatacttgacaacgataaaaataa 12797929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 492 - 616
Target Start/End: Original strand, 25313487 - 25313613
Alignment:
Q  492 tatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacat--tagtagtgtttaaattgcagtattta 589  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| | ||| || ||||||||  ||||| ||  |||||||||||||||||| |||||||    
T  25313487 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 25313586  T
Q  590 attttaaatatttgataatgataaaaa 616  Q
    |||||||||| ||||||||||||||||    
T  25313587 attttaaatacttgataatgataaaaa 25313613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 492 - 616
Target Start/End: Original strand, 26200981 - 26201107
Alignment:
Q  492 tatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacat--tagtagtgtttaaattgcagtattta 589  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| | ||| || ||||||||  ||||| ||  |||||||||||||||||| |||||||    
T  26200981 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 26201080  T
Q  590 attttaaatatttgataatgataaaaa 616  Q
    |||||||||| ||||||||||||||||    
T  26201081 attttaaatacttgataatgataaaaa 26201107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 437 - 597
Target Start/End: Complemental strand, 11429094 - 11428933
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgg 536  Q
    ||||||||||  |||| | ||||| ||||||||| |  |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11429094 ttggaacattgatgtacttttggatgaaaaattggaagattaaacaccagataattatactttgatctaatgttgcgtgaattgaaaaaatagagtgtgg 11428995  T
Q  537 gagtcccaaataaaata-ag-acacacattagtagtgtttaaattgcagtatttaattttaaa 597  Q
    | |||||| || ||||| || ||||||||| ||||| |||||| ||| || ||||||||||||    
T  11428994 gggtcccacattaaatagagcacacacatttgtagtatttaaactgcggt-tttaattttaaa 11428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 558 - 624
Target Start/End: Complemental strand, 5856999 - 5856933
Alignment:
Q  558 acacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  5856999 acacattagtagtgtttaaattgcggtatttaattttaaataattgataatgataaaaataatagta 5856933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 492 - 622
Target Start/End: Complemental strand, 17914675 - 17914542
Alignment:
Q  492 tatactttgatctaatgttgtgtgaattgaaaaaa-tagagtgtgggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtattt 588  Q
    ||||||||||||||||||||||| |||| |||||| |||||||| |  |||| | |||||||  || |||||||||| |||||||| |||| | ||||||    
T  17914675 tatactttgatctaatgttgtgtaaattaaaaaaaatagagtgttgaggtcctacataaaatggaacacacacattaatagtgttttaattacggtattt 17914576  T
Q  589 aattttaaatatttgataatgataaaaataatag 622  Q
    |||||||||||  |||| ||||||||||||||||    
T  17914575 aattttaaatacctgatgatgataaaaataatag 17914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 19674871 - 19674724
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||| ||||| | |||||||| |||| | |||||||  || |||||||| ||||||||    
T  19674871 attaaacaccaaataattaaactttgatctagtgttgtgtgaattggaaaaa-atagtgtgggggtccgacataaaatagaacacacacatcagtagtgt 19674773  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||||||     ||||||||||||||||  | |||||||| |||||||||    
T  19674772 ttaaataatgatatttaattttaaatacctaataatgatgaaaataata 19674724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 506
Target Start/End: Complemental strand, 5857096 - 5857028
Alignment:
Q  437 ttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaa 506  Q
    ||||||||||||||| |||||||||||||||||| |  |||||||||||| |||||||||||||| ||||    
T  5857096 ttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaa-taattatactttgacctaa 5857028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 624
Target Start/End: Complemental strand, 14509982 - 14509925
Alignment:
Q  567 tagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    ||||||||||||||  ||||||||||||||||| || ||||| |||||||||||||||    
T  14509982 tagtgtttaaattgtggtatttaattttaaatacttaataataataaaaataatagta 14509925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 29891923 - 29891991
Alignment:
Q  440 gaacattagtgtaatgttggaagaaaaa-ttgaataattaaacaccaagtaattatactttgatctaat 507  Q
    ||||||| |||| |||||| |||||||| ||| |  ||||||||| |||||||| ||||||||||||||    
T  29891923 gaacattggtgtgatgttgaaagaaaaaattggaagattaaacacaaagtaattgtactttgatctaat 29891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 112; Significance: 3e-56; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 5202 - 5012
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||| |||||||| |||||||||||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  5202 gttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagttaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 5103  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||  |||||||  || || ||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  5102 ggggtcccgcataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtgataaaaataatagta 5012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 624
Target Start/End: Original strand, 442898 - 443087
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    ||||||| |||| ||| ||||||||| | |||||| |  ||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  442898 gttggaatattactgtgatgttggaaaataaattggaagattaaacattaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 442997  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
    || |||||| |||||||  || |||||||||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  442998 gg-gtcccacataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatgataaaaataatagta 443087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 5107 - 4919
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||| |||| |||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5107 gttggatcattggtgtgatgttggaagaaaaattgaaagattaaacaccacgtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgtg 5008  T
Q  536 ggagtcccaaataaaataagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgat-aaaaataatagta 624  Q
    || || ||| ||||||||  ||||| |||||| |||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  5007 gg-gtaccacataaaatataacacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatgataaaaaataatagta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 438 - 624
Target Start/End: Complemental strand, 30313 - 30125
Alignment:
Q  438 tggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggg 537  Q
    |||||||||  ||| |||||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  30313 tggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgtagg 30214  T
Q  538 agtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
      ||||| |||||||  || |||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||||||||||||||    
T  30213 gatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatgataaaaataatagta 30125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 26540 - 26393
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    |||||||||||| |||||| ||||| |||||  |||||||||||||||||||||||||| ||  |||||| |||||||  || |||||||||||||||||    
T  26540 attaaacaccaaataattaaactttcatctagagttgtgtgaattgaaaaaatagagtgcggaggtcccacataaaatagaacacacacattagtagtgt 26441  T
Q  573 ttaaattgcagtatttaattttaaatatttgataatgataaaaataat 620  Q
    |||||| |  |||||||||||||||||  ||||||| || ||||||||    
T  26440 ttaaatagaggtatttaattttaaatacctgataataatgaaaataat 26393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 438 - 624
Target Start/End: Complemental strand, 36257 - 36070
Alignment:
Q  438 tggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggg 537  Q
    |||||||||||||| |||||| || | ||||||||  |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36257 tggaacattagtgtgatgttgaaaaataaattgaaagattaaacaccaaataattatattttgatctaatgttgtatgaattgaaaaaatagagtgtggg 36158  T
Q  538 agtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
     | |||| |||||||  ||  ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  36157 -gccccacataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatgataaaaataatagta 36070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 8247 - 8056
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattgaataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtg 535  Q
    |||||||||||  ||  |||||||| || |||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8247 gttggaacattgatgcgatgttggatgataaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgtg 8148  T
Q  536 ggagtcccaaataaaat--aagacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgat-aaaaataatagta 624  Q
    || |||||| |||| ||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||    
T  8147 ggggtcccacataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatgataaaaaataatagta 8056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 6371 - 6180
Alignment:
Q  436 gttggaacattagtgtaatgttggaagaaaaattga-ataattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 534  Q
    ||||||||||| |||  ||||||||||||||| | | | ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  6371 gttggaacattggtgcgatgttggaagaaaaaattataaaattaaacaccaagtaattatacttcgatctaatgttatgtgaattgaaaaaatagagtgt 6272  T
Q  535 gggagtcccaaataaaata--agacacacattagtagtgtttaaattgcagtatttaattttaaatatttgataatgataaaaataatagta 624  Q
     |  |||||| |||| |||  | |||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  6271 tgaggtcccacataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatgataaaaataatagta 6180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 595
Target Start/End: Original strand, 64892 - 65013
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaat--aagacacacattagtagtgt 572  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||| || |||||| |||||||  || ||||||||||||||| |    
T  64892 attaaacac-aagtaattaaactttgatctagtgttgtgtgaattaaaaaaatagagtgtaggggtcccacataaaatagaacacacacattagtagtct 64990  T
Q  573 ttaaattgcagtatttaatttta 595  Q
    |||||| |  |||||||| ||||    
T  64991 ttaaatagtggtatttaaattta 65013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 475 - 621
Target Start/End: Original strand, 3796 - 3948
Alignment:
Q  475 attaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccaaataaaataagacacacattagtagtgttt 574  Q
    |||||||| ||||| || | ||||||| ||| |||  |||||||| ||||||||||| ||| | ||| || ||||||||| |||||||| | ||||||||    
T  3796 attaaacatcaagttataagactttgagctagtgtgatgtgaattaaaaaaatagagagtgagggtctcacataaaataaaacacacatcaatagtgttt 3895  T
Q  575 aa------attgcagtatttaattttaaatatttgataatgataaaaataata 621  Q
    ||      ||||| ||||||||||| ||||| |||||||||||||||||||||    
T  3896 aaattaatattgcggtatttaatttcaaatacttgataatgataaaaataata 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University