View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8670_low_5 (Length: 437)

Name: NF8670_low_5
Description: NF8670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8670_low_5
NF8670_low_5
[»] chr7 (12 HSPs)
chr7 (289-425)||(12098369-12098505)
chr7 (19-124)||(12096770-12096874)
chr7 (198-293)||(12096870-12096965)
chr7 (290-362)||(38360084-38360156)
chr7 (27-110)||(12080107-12080190)
chr7 (269-420)||(12081453-12081603)
chr7 (164-207)||(12081369-12081412)
chr7 (274-353)||(34519530-34519609)
chr7 (274-353)||(41665569-41665648)
chr7 (317-372)||(42073035-42073090)
chr7 (192-233)||(2049085-2049126)
chr7 (314-415)||(29992729-29992829)
[»] chr8 (2 HSPs)
chr8 (306-421)||(15351686-15351800)
chr8 (274-353)||(35225680-35225759)
[»] scaffold0062 (1 HSPs)
scaffold0062 (334-420)||(3687-3773)
[»] chr3 (2 HSPs)
chr3 (274-347)||(14155448-14155520)
chr3 (269-401)||(34351350-34351482)
[»] scaffold0027 (1 HSPs)
scaffold0027 (306-382)||(15161-15237)
[»] chr1 (5 HSPs)
chr1 (274-362)||(50382471-50382559)
chr1 (274-353)||(13994143-13994222)
chr1 (164-226)||(32467810-32467872)
chr1 (314-406)||(46154874-46154966)
chr1 (306-362)||(51703263-51703319)
[»] chr5 (2 HSPs)
chr5 (274-353)||(22432308-22432387)
chr5 (274-406)||(3735322-3735454)
[»] chr4 (1 HSPs)
chr4 (274-421)||(43739414-43739561)
[»] chr6 (2 HSPs)
chr6 (297-402)||(27756274-27756379)
chr6 (306-362)||(10324175-10324231)
[»] chr2 (3 HSPs)
chr2 (192-232)||(17237277-17237317)
chr2 (297-353)||(38993087-38993143)
chr2 (274-406)||(41366103-41366233)


Alignment Details
Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 12098369 - 12098505
Alignment:
Q  289 attatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaattcttataagatcaa 388  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  12098369 attatccctcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaacattttgccctccaaaattcttataagatcaa 12098468  T
Q  389 agattattcaatatcatataagtttatcatgtgatgt 425  Q
    |||||||||||||||||| |||||||| |||||||||    
T  12098469 agattattcaatatcataaaagtttattatgtgatgt 12098505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 12096770 - 12096874
Alignment:
Q  19 taaatgtgattgaatgtcggtgtttattacttgatacaaatcaaaatataaaggaaaagataaggaggaaagtgttttttctttttcaaatgaacacaag 118  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12096770 taaatgtgattgaatgtcggtgtttataacgggatacaaatcaaaag-taaaggaaaagataaggaggaaagtgttttttcttttacaaatgaacacaag 12096868  T
Q  119 gtgcat 124  Q
    ||||||    
T  12096869 gtgcat 12096874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 12096870 - 12096965
Alignment:
Q  198 tgcaattgtataatatttgatttgtaaaattgttttacactaacatgatatattggaggtaagagagtagaacaccacaaaaactgaaattattat 293  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  12096870 tgcatttgtacaatatttgattcgtaaaattgttttacactaacatgatatattggaggcaagagagtagagcaccacaaaaactgaaattattat 12096965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 38360156 - 38360084
Alignment:
Q  290 ttatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatatttt 362  Q
    ||||||||| | ||||  |||||||| ||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  38360156 ttatccttcataaaattccaacataattttttgtctcacctacaagttgtttaaaatacaaaaataatatttt 38360084  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 12080107 - 12080190
Alignment:
Q  27 attgaatgtcggtgtttattacttgatacaaatcaaaatataaaggaaaagataaggaggaaagtgttttttctttttcaaatg 110  Q
    |||||||||| |||||||   |||||| |||||  |||| || ||||||||||||||||| ||| |||| ||||||||||||||    
T  12080107 attgaatgtcagtgtttaaatcttgatgcaaattcaaatgtagaggaaaagataaggaggcaagagtttcttctttttcaaatg 12080190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 420
Target Start/End: Original strand, 12081453 - 12081603
Alignment:
Q  269 acaccacaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctc 368  Q
    |||| ||||||||| ||||||| |||  ||  ||||||| |||| || ||||||| ||||||||| ||||||  ||||||||||| | | | ||| ||      
T  12081453 acacgacaaaaactaaaattatcatctctcaataaatcataacacaattttttgtttcaactacgggttgtcggaaatacaaaaatagtctgttatccat 12081552  T
Q  369 caaaattcttataagatcaaagattattcaatatcatataagtttatcatgt 420  Q
     |||| | | ||||||||| | ||| ||||||||||||||||||||||||||    
T  12081553 aaaaactgt-ataagatcacatattgttcaatatcatataagtttatcatgt 12081603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 12081369 - 12081412
Alignment:
Q  164 gtttgatctcctaacaaacaaaggataagacaactgcaattgta 207  Q
    |||||||||||||||||| |||||||||||||||| || |||||    
T  12081369 gtttgatctcctaacaaataaaggataagacaacttcagttgta 12081412  T

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Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 34519609 - 34519530
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaa 353  Q
    |||||||||| |||| || ||| |||  ||| ||||||| ||||||||||| ||  ||| ||||||||||||||||||||    
T  34519609 acaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtctaaaatacaaaaa 34519530  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 41665569 - 41665648
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaa 353  Q
    |||||||||| |||| || ||| |||  ||| |||| || ||||||||||||||  ||| ||||||||||||||||||||    
T  41665569 acaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaa 41665648  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 42073035 - 42073090
Alignment:
Q  317 tttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaa 372  Q
    ||||||| |||| ||| |||||||||||||||||||| ||||||||| || |||||    
T  42073035 tttttgtttcaaatacaagttgtctaaaatacaaaaataatattttatccaccaaa 42073090  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 2049126 - 2049085
Alignment:
Q  192 gacaactgcaattgtataatatttgatttgtaaaattgtttt 233  Q
    ||||||| |||||||||||| ||||||||| |||||||||||    
T  2049126 gacaacttcaattgtataatgtttgatttgaaaaattgtttt 2049085  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 29992729 - 29992829
Alignment:
Q  314 aactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaattcttataagatcaaagattattcaatatcatataagttt 413  Q
    ||||||||||||||  ||| |||| |||||||||| |||| ||| ||||  || |||||| || ||||||| |||| ||||||||| |||||| || |||    
T  29992729 aactttttgtctcacgtacaagttatctaaaatac-aaaataattttttgtccaccaaaaatcgtataagaccaaaaattattcaaaatcatagaacttt 29992827  T
Q  414 at 415  Q
    ||    
T  29992828 at 29992829  T

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Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 421
Target Start/End: Complemental strand, 15351800 - 15351686
Alignment:
Q  306 cacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaattcttataagatcaaagattattcaatatcat 405  Q
    ||||||| ||||||||||||||  ||| | ||||||||||||| |||| || |||||| |  |||||| || ||||| |||||| |||||||||||||||    
T  15351800 cacaacacaactttttgtctcagttacaaattgtctaaaataccaaaataacattttatcaaccaaaaatcgtataaaatcaaa-attattcaatatcat 15351702  T
Q  406 ataagtttatcatgtg 421  Q
    | || |||||||||||    
T  15351701 aaaaatttatcatgtg 15351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 35225759 - 35225680
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaa 353  Q
    |||||||||| |||| || ||| |||  ||| |||| || ||||||||||| ||| ||| ||||||||||||||||||||    
T  35225759 acaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgtctaaaatacaaaaa 35225680  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 3687 - 3773
Alignment:
Q  334 agttgtctaaaatacaaaaacaatattttaccctccaaaattcttataagatcaaagattattcaatatcatataagtttatcatgt 420  Q
    |||| ||||||||||||||| | | ||||| || |||||| || |||||||| ||| |||||||||||||||| |||||| ||||||    
T  3687 agttatctaaaatacaaaaatagttttttatccaccaaaaatcatataagataaaaaattattcaatatcataaaagtttgtcatgt 3773  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 14155448 - 14155520
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaata 347  Q
    ||||||||||||||| |||||| ||  ||||||| |||| ||||||||||||||| ||| ||||||||||||||    
T  14155448 acaaaaactgaaatt-ttatccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaata 14155520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 401
Target Start/End: Original strand, 34351350 - 34351482
Alignment:
Q  269 acaccacaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctc 368  Q
    |||| ||||||||  |||||||| ||| || | ||| ||||||| ||||||||||| ||  ||| ||||||||||||||  |||| || |||||| || |    
T  34351350 acacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttgtctaaaatatcaaaataacattttatccac 34351449  T
Q  369 caaaattcttataagatcaaagattattcaata 401  Q
     |||| || || |||| || | |||||||||||    
T  34351450 aaaaaatcgtacaagaccataaattattcaata 34351482  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 15237 - 15161
Alignment:
Q  306 cacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaattcttataa 382  Q
    ||||||| ||||||||||||||  ||| ||||||||||||||| |||| | ||||||  || |||||| ||||||||    
T  15237 cacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtcccccaaaaatcttataa 15161  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 50382471 - 50382559
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatatttt 362  Q
    ||||||||||||||| || ||||||   ||| ||||||| ||||||||||| ||  ||| |||||||||||| ||||||| || |||||    
T  50382471 acaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataacatttt 50382559  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 13994143 - 13994222
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaa 353  Q
    ||||||||||||||| || ||| ||   ||| ||||||| ||||||||||||||  ||| ||||||||||||||| ||||    
T  13994143 acaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaataccaaaa 13994222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 32467810 - 32467872
Alignment:
Q  164 gtttgatctcctaacaaacaaaggataagacaactgcaattgtataatatttgatttgtaaaa 226  Q
    |||||||||||||| ||| |||| | | ||||| | |||||||| ||||||||||||||||||    
T  32467810 gtttgatctcctaaaaaataaagaacatgacaatttcaattgtacaatatttgatttgtaaaa 32467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 406
Target Start/End: Complemental strand, 46154966 - 46154874
Alignment:
Q  314 aactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaattcttataagatcaaagattattcaatatcata 406  Q
    ||||||||||| ||  ||| ||||||||||||||| |||| || |||||  ||| ||||| |||||||| |  ||| |||||||||| |||||    
T  46154966 aactttttgtcccacttacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcttataaaacaaaaaattattcaatgtcata 46154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 51703263 - 51703319
Alignment:
Q  306 cacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatatttt 362  Q
    ||||||| ||||||||||| || ||||  ||||||||||||||||||| || |||||    
T  51703263 cacaacacaactttttgtcccacctacatgttgtctaaaatacaaaaataacatttt 51703319  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 22432308 - 22432387
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaa 353  Q
    ||||||||||| ||| || ||| || | ||| ||||||| || |||||||||||| ||| ||||||||||||||| ||||    
T  22432308 acaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaataccaaaa 22432387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 406
Target Start/End: Complemental strand, 3735454 - 3735322
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaa 373  Q
    ||||||||||| ||| || ||| ||   ||| |||| || ||||||||||| ||  ||| ||||||||||||||| |||| || |||||  |||||||||    
T  3735454 acaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcctccaaaa 3735355  T
Q  374 ttcttataagatcaaagattattcaatatcata 406  Q
     || ||||| |  ||| |||||||||| |||||    
T  3735354 atcgtataaaacaaaaaattattcaatgtcata 3735322  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 421
Target Start/End: Complemental strand, 43739561 - 43739414
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaa 373  Q
    |||||||||||||||||| ||| ||   ||| ||||||| ||| ||||||| ||  ||| ||||||||||||||  |||| || |||||| || | ||||    
T  43739561 acaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatccacaaaaa 43739462  T
Q  374 ttcttataagatcaaagattattcaatatcatataagtttatcatgtg 421  Q
     |  ||||||| |||| |||||| |||| || | || |||||||||||    
T  43739461 attgtataagaccaaaaattatttaataccaaaaaaatttatcatgtg 43739414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 27756379 - 27756274
Alignment:
Q  297 tcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaattcttataagatcaaagattatt 396  Q
    |||||||||||||||| ||||||||||| |   ||  ||||||||||||||  |||| || |||||| || | |||  || || |||| |||||||||||    
T  27756379 tcgttaaatcacaacacaactttttgtcccccgtataagttgtctaaaatatcaaaataacattttatccactaaatatcgtacaagaccaaagattatt 27756280  T
Q  397 caatat 402  Q
    ||||||    
T  27756279 caatat 27756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 10324175 - 10324231
Alignment:
Q  306 cacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatatttt 362  Q
    ||||||| ||||||||||||||  ||| ||||||||||||||| |||| || |||||    
T  10324175 cacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacatttt 10324231  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000006; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 17237277 - 17237317
Alignment:
Q  192 gacaactgcaattgtataatatttgatttgtaaaattgttt 232  Q
    ||||||| |||||||| ||| ||||||||||||||||||||    
T  17237277 gacaacttcaattgtacaatttttgatttgtaaaattgttt 17237317  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 38993087 - 38993143
Alignment:
Q  297 tcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaa 353  Q
    |||| ||| ||||||| ||||||||||| ||  ||| ||||||||||||||||||||    
T  38993087 tcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaa 38993143  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 406
Target Start/End: Original strand, 41366103 - 41366233
Alignment:
Q  274 acaaaaactgaaattattatccttcgttaaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaatattttaccctccaaaa 373  Q
    ||||||||||||||| || ||| ||   ||| ||||||| || |||||||||||  ||| ||||||||||||||| |||| || ||| || || | ||||    
T  41366103 acaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtctaaaataccaaaataacattgtatccacaaaaa 41366202  T
Q  374 ttcttataagatcaaagattattcaatatcata 406  Q
     |  ||||||| |||| ||||||||||||||||    
T  41366203 attatataaga-caaa-attattcaatatcata 41366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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