View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8671_high_11 (Length: 224)

Name: NF8671_high_11
Description: NF8671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8671_high_11
NF8671_high_11
[»] chr1 (85 HSPs)
chr1 (1-209)||(40144731-40144939)
chr1 (73-209)||(49223942-49224078)
chr1 (73-209)||(37506150-37506289)
chr1 (82-209)||(15699148-15699276)
chr1 (76-206)||(32825951-32826080)
chr1 (76-209)||(20209799-20209932)
chr1 (73-202)||(42410027-42410156)
chr1 (73-209)||(38787367-38787503)
chr1 (74-206)||(45331370-45331502)
chr1 (73-209)||(39864137-39864273)
chr1 (73-209)||(41121778-41121917)
chr1 (73-209)||(16395003-16395138)
chr1 (111-205)||(37276491-37276585)
chr1 (73-208)||(13579577-13579712)
chr1 (90-208)||(12039109-12039227)
chr1 (73-202)||(28749024-28749153)
chr1 (73-208)||(31042824-31042959)
chr1 (73-203)||(34031482-34031613)
chr1 (80-202)||(917057-917179)
chr1 (73-205)||(24991609-24991741)
chr1 (84-208)||(26093421-26093545)
chr1 (73-209)||(52429370-52429506)
chr1 (90-209)||(9307653-9307772)
chr1 (73-209)||(31978608-31978744)
chr1 (98-209)||(21909987-21910097)
chr1 (95-181)||(43500762-43500848)
chr1 (90-202)||(23168966-23169078)
chr1 (83-203)||(30754907-30755027)
chr1 (80-207)||(33733226-33733352)
chr1 (122-205)||(36701951-36702034)
chr1 (122-205)||(36718055-36718138)
chr1 (100-209)||(10495865-10495973)
chr1 (73-209)||(11449911-11450045)
chr1 (69-179)||(6267808-6267918)
chr1 (111-200)||(22181371-22181460)
chr1 (77-209)||(2572495-2572626)
chr1 (73-209)||(5179355-5179491)
chr1 (73-209)||(6023605-6023741)
chr1 (72-203)||(44707715-44707846)
chr1 (83-205)||(6160425-6160547)
chr1 (111-205)||(7759245-7759339)
chr1 (119-209)||(24880902-24880992)
chr1 (73-202)||(32970523-32970652)
chr1 (95-166)||(35367622-35367694)
chr1 (119-208)||(4441605-4441694)
chr1 (122-207)||(8896337-8896422)
chr1 (133-209)||(14757610-14757686)
chr1 (96-184)||(43614448-43614536)
chr1 (83-206)||(41080627-41080750)
chr1 (127-209)||(3312137-3312219)
chr1 (73-178)||(27687298-27687404)
chr1 (97-206)||(12151205-12151314)
chr1 (128-200)||(29074919-29074991)
chr1 (117-179)||(15444481-15444543)
chr1 (136-205)||(7351666-7351735)
chr1 (168-209)||(35367828-35367869)
chr1 (118-200)||(44122248-44122332)
chr1 (128-205)||(44761542-44761619)
chr1 (122-204)||(9379263-9379345)
chr1 (122-208)||(27896982-27897068)
chr1 (152-202)||(29778431-29778481)
chr1 (131-209)||(17988572-17988652)
chr1 (156-209)||(22856276-22856329)
chr1 (73-178)||(35682762-35682866)
chr1 (117-210)||(11642195-11642283)
chr1 (167-210)||(13365999-13366042)
chr1 (128-199)||(31154164-31154235)
chr1 (127-202)||(34688857-34688932)
chr1 (127-202)||(34693385-34693460)
chr1 (128-206)||(44426746-44426827)
chr1 (122-209)||(45615557-45615644)
chr1 (122-200)||(35538678-35538756)
chr1 (115-209)||(49176943-49177037)
chr1 (128-205)||(26120451-26120528)
chr1 (122-206)||(978862-978946)
chr1 (143-179)||(26000810-26000846)
chr1 (122-202)||(26257945-26258025)
chr1 (124-200)||(51028500-51028576)
chr1 (84-206)||(3260620-3260738)
chr1 (128-203)||(6365663-6365738)
chr1 (152-207)||(32219696-32219751)
chr1 (133-202)||(27721565-27721634)
chr1 (152-209)||(52837306-52837363)
chr1 (133-209)||(15057456-15057531)
chr1 (98-150)||(26255977-26256029)
[»] chr4 (86 HSPs)
chr4 (65-209)||(47772970-47773114)
chr4 (70-209)||(17114466-17114605)
chr4 (73-209)||(11907558-11907694)
chr4 (73-209)||(52859758-52859894)
chr4 (73-209)||(33790690-33790826)
chr4 (67-209)||(38405055-38405197)
chr4 (73-209)||(6609787-6609924)
chr4 (73-209)||(2066815-2066951)
chr4 (73-208)||(49428301-49428436)
chr4 (73-209)||(38502441-38502577)
chr4 (88-207)||(3689590-3689709)
chr4 (73-209)||(5841386-5841522)
chr4 (79-209)||(25233207-25233337)
chr4 (73-209)||(32884827-32884963)
chr4 (73-209)||(34360681-34360817)
chr4 (73-209)||(52247387-52247523)
chr4 (72-208)||(22130070-22130210)
chr4 (100-210)||(44536182-44536292)
chr4 (73-205)||(7061623-7061755)
chr4 (73-209)||(17237255-17237391)
chr4 (90-206)||(40122830-40122946)
chr4 (79-202)||(28500856-28500979)
chr4 (90-209)||(47464341-47464460)
chr4 (119-209)||(21240709-21240799)
chr4 (68-202)||(36985819-36985953)
chr4 (73-209)||(43237269-43237405)
chr4 (73-204)||(6643619-6643750)
chr4 (73-208)||(16821290-16821425)
chr4 (80-207)||(2942611-2942737)
chr4 (134-208)||(26147635-26147709)
chr4 (114-207)||(35380333-35380426)
chr4 (78-209)||(2653446-2653575)
chr4 (89-209)||(49175909-49176029)
chr4 (73-208)||(35311182-35311317)
chr4 (73-200)||(46396842-46396969)
chr4 (83-182)||(51625136-51625235)
chr4 (72-200)||(4972595-4972723)
chr4 (73-209)||(11288589-11288724)
chr4 (86-209)||(42616875-42616998)
chr4 (73-203)||(42517598-42517727)
chr4 (88-209)||(54506814-54506935)
chr4 (94-209)||(30682176-30682291)
chr4 (90-209)||(53346785-53346904)
chr4 (128-200)||(32469962-32470034)
chr4 (73-208)||(48914102-48914242)
chr4 (118-209)||(23915434-23915525)
chr4 (76-209)||(461984-462117)
chr4 (95-200)||(52869107-52869212)
chr4 (114-209)||(39157873-39157969)
chr4 (90-200)||(39397379-39397489)
chr4 (76-193)||(8175542-8175659)
chr4 (71-196)||(27880199-27880323)
chr4 (84-172)||(41711426-41711514)
chr4 (128-199)||(17512353-17512424)
chr4 (141-196)||(29295253-29295307)
chr4 (136-203)||(50264102-50264169)
chr4 (73-207)||(18532207-18532341)
chr4 (122-208)||(30192232-30192318)
chr4 (72-150)||(50263890-50263968)
chr4 (112-209)||(19265834-19265931)
chr4 (121-174)||(21325171-21325224)
chr4 (128-209)||(49746987-49747068)
chr4 (89-205)||(53412138-53412254)
chr4 (97-204)||(5618573-5618680)
chr4 (119-193)||(34321716-34321788)
chr4 (152-202)||(38663485-38663535)
chr4 (128-197)||(20612185-20612254)
chr4 (123-208)||(47358958-47359043)
chr4 (128-200)||(49579192-49579264)
chr4 (89-149)||(3669965-3670025)
chr4 (128-209)||(7270453-7270538)
chr4 (121-209)||(11024897-11024985)
chr4 (89-149)||(25141889-25141949)
chr4 (79-150)||(13016403-13016474)
chr4 (154-209)||(18741514-18741569)
chr4 (79-190)||(35251934-35252045)
chr4 (133-184)||(50443038-50443089)
chr4 (123-209)||(2400804-2400890)
chr4 (135-209)||(7987000-7987074)
chr4 (162-208)||(16506281-16506327)
chr4 (114-200)||(29575143-29575229)
chr4 (119-209)||(35998837-35998927)
chr4 (163-205)||(44526409-44526451)
chr4 (143-200)||(12567211-12567268)
chr4 (128-196)||(3098757-3098825)
chr4 (121-208)||(43902278-43902368)
[»] chr2 (59 HSPs)
chr2 (67-209)||(16463715-16463857)
chr2 (73-209)||(39785611-39785750)
chr2 (68-209)||(36794310-36794451)
chr2 (80-209)||(15359045-15359174)
chr2 (73-209)||(25637507-25637642)
chr2 (78-200)||(45235616-45235738)
chr2 (73-209)||(36354394-36354530)
chr2 (76-209)||(14523326-14523459)
chr2 (71-209)||(37322454-37322593)
chr2 (84-195)||(32783404-32783515)
chr2 (94-203)||(31448665-31448774)
chr2 (93-207)||(16805909-16806023)
chr2 (93-207)||(16845190-16845304)
chr2 (76-209)||(39691516-39691649)
chr2 (78-205)||(34120395-34120520)
chr2 (73-203)||(5789599-5789729)
chr2 (80-209)||(35313913-35314043)
chr2 (100-208)||(34225617-34225725)
chr2 (73-209)||(43410452-43410588)
chr2 (80-209)||(16377614-16377743)
chr2 (73-209)||(17695356-17695492)
chr2 (119-209)||(8947049-8947139)
chr2 (89-179)||(19937733-19937823)
chr2 (93-209)||(43115773-43115889)
chr2 (80-209)||(11742484-11742615)
chr2 (118-209)||(9458267-9458353)
chr2 (73-162)||(26607919-26608008)
chr2 (118-209)||(31976374-31976465)
chr2 (128-200)||(1206709-1206781)
chr2 (73-141)||(5272144-5272212)
chr2 (90-173)||(3323254-3323337)
chr2 (122-209)||(35242297-35242384)
chr2 (142-208)||(38187903-38187969)
chr2 (128-209)||(43730641-43730720)
chr2 (112-209)||(26337112-26337208)
chr2 (73-170)||(27501489-27501586)
chr2 (152-209)||(32831205-32831262)
chr2 (114-199)||(38763584-38763669)
chr2 (73-193)||(11367121-11367241)
chr2 (112-200)||(27866527-27866614)
chr2 (80-208)||(18853158-18853287)
chr2 (127-209)||(19426481-19426564)
chr2 (119-193)||(43699596-43699670)
chr2 (123-209)||(39329663-39329750)
chr2 (155-203)||(3601416-3601464)
chr2 (73-109)||(30544409-30544445)
chr2 (130-209)||(41220954-41221033)
chr2 (67-149)||(39443799-39443881)
chr2 (128-178)||(43730487-43730537)
chr2 (157-205)||(26608178-26608226)
chr2 (128-200)||(28170589-28170661)
chr2 (141-205)||(33406993-33407057)
chr2 (114-202)||(34437993-34438081)
chr2 (121-193)||(42363736-42363808)
chr2 (120-203)||(5050606-5050689)
chr2 (129-195)||(4411001-4411067)
chr2 (155-209)||(17346395-17346449)
chr2 (156-209)||(2053284-2053337)
chr2 (169-209)||(26863405-26863445)
[»] chr6 (49 HSPs)
chr6 (70-209)||(11655895-11656034)
chr6 (73-209)||(32440597-32440733)
chr6 (72-209)||(6801957-6802094)
chr6 (73-209)||(30716926-30717062)
chr6 (73-201)||(29363340-29363468)
chr6 (73-200)||(21010212-21010339)
chr6 (73-209)||(3291720-3291856)
chr6 (73-208)||(13087557-13087692)
chr6 (78-196)||(27448113-27448231)
chr6 (102-209)||(5302377-5302484)
chr6 (73-202)||(6834321-6834450)
chr6 (73-209)||(23142693-23142829)
chr6 (98-207)||(1781830-1781939)
chr6 (82-210)||(1955940-1956068)
chr6 (112-208)||(13909451-13909547)
chr6 (73-208)||(15058144-15058279)
chr6 (122-209)||(24983450-24983537)
chr6 (73-209)||(31894162-31894298)
chr6 (81-205)||(3720201-3720325)
chr6 (132-209)||(11143597-11143675)
chr6 (89-209)||(1063571-1063691)
chr6 (73-208)||(17828967-17829101)
chr6 (83-208)||(7920266-7920390)
chr6 (90-209)||(181582-181700)
chr6 (112-187)||(27367427-27367502)
chr6 (112-187)||(27457774-27457849)
chr6 (122-203)||(1225079-1225160)
chr6 (119-203)||(26592354-26592438)
chr6 (122-205)||(21804530-21804612)
chr6 (115-209)||(12605457-12605551)
chr6 (122-175)||(7072220-7072273)
chr6 (156-205)||(8115073-8115122)
chr6 (119-191)||(2423662-2423734)
chr6 (128-208)||(23397628-23397708)
chr6 (117-209)||(34300021-34300113)
chr6 (129-179)||(15582339-15582389)
chr6 (119-205)||(21018789-21018875)
chr6 (130-207)||(1671715-1671792)
chr6 (139-179)||(4581999-4582039)
chr6 (156-203)||(8695077-8695124)
chr6 (114-209)||(12339986-12340080)
chr6 (132-199)||(16431056-16431123)
chr6 (128-199)||(17835420-17835491)
chr6 (122-200)||(7764240-7764317)
chr6 (146-199)||(31223332-31223385)
chr6 (160-208)||(6245953-6246001)
chr6 (141-209)||(28101379-28101447)
chr6 (74-166)||(34639405-34639497)
chr6 (169-209)||(34657610-34657650)
[»] chr7 (87 HSPs)
chr7 (80-206)||(42935697-42935823)
chr7 (73-209)||(83418-83554)
chr7 (73-209)||(16560530-16560666)
chr7 (73-209)||(16604996-16605132)
chr7 (73-209)||(28202269-28202405)
chr7 (73-209)||(34947533-34947669)
chr7 (73-209)||(9786021-9786157)
chr7 (83-209)||(759061-759187)
chr7 (95-209)||(43873956-43874070)
chr7 (73-209)||(21390328-21390466)
chr7 (73-209)||(11373388-11373524)
chr7 (84-203)||(27921027-27921146)
chr7 (71-209)||(13961992-13962130)
chr7 (73-198)||(46211472-46211600)
chr7 (84-201)||(40076356-40076473)
chr7 (90-209)||(41506043-41506161)
chr7 (80-208)||(44424178-44424297)
chr7 (73-209)||(26974059-26974198)
chr7 (73-209)||(7463246-7463382)
chr7 (98-205)||(38391785-38391892)
chr7 (95-209)||(21759966-21760080)
chr7 (95-209)||(3178186-3178300)
chr7 (73-203)||(28103772-28103902)
chr7 (65-179)||(44180268-44180382)
chr7 (73-209)||(24516249-24516385)
chr7 (80-202)||(22738741-22738863)
chr7 (89-209)||(2459504-2459622)
chr7 (80-209)||(8592407-8592536)
chr7 (72-209)||(23670519-23670655)
chr7 (76-209)||(29835377-29835510)
chr7 (71-208)||(31930455-31930592)
chr7 (73-203)||(2850841-2850971)
chr7 (90-209)||(21350605-21350721)
chr7 (100-209)||(33819247-33819356)
chr7 (93-203)||(48608905-48609011)
chr7 (73-209)||(5524413-5524549)
chr7 (79-209)||(46478259-46478389)
chr7 (73-136)||(36790852-36790915)
chr7 (99-209)||(30866000-30866110)
chr7 (95-209)||(32346034-32346148)
chr7 (73-208)||(17828309-17828446)
chr7 (73-209)||(34100507-34100643)
chr7 (142-209)||(6494963-6495030)
chr7 (78-201)||(7457386-7457509)
chr7 (95-202)||(12631345-12631452)
chr7 (122-208)||(32018924-32019011)
chr7 (83-203)||(16904418-16904538)
chr7 (122-209)||(21937796-21937883)
chr7 (114-209)||(29121536-29121631)
chr7 (73-196)||(39452390-39452512)
chr7 (95-209)||(19271715-19271829)
chr7 (114-203)||(7930092-7930181)
chr7 (156-209)||(42796041-42796094)
chr7 (126-198)||(47045467-47045538)
chr7 (89-208)||(32018688-32018807)
chr7 (120-209)||(14063349-14063438)
chr7 (120-209)||(14373377-14373466)
chr7 (119-192)||(27556975-27557048)
chr7 (123-207)||(37245725-37245808)
chr7 (122-209)||(49101696-49101786)
chr7 (127-202)||(39005461-39005536)
chr7 (128-193)||(25531005-25531070)
chr7 (73-117)||(6494919-6494963)
chr7 (116-188)||(27170764-27170836)
chr7 (130-200)||(15464720-15464790)
chr7 (163-205)||(25571456-25571498)
chr7 (117-190)||(39308638-39308711)
chr7 (153-209)||(24167024-24167080)
chr7 (173-209)||(36790773-36790809)
chr7 (169-209)||(46602083-46602123)
chr7 (133-176)||(17609350-17609393)
chr7 (133-176)||(17609593-17609636)
chr7 (133-176)||(17609836-17609879)
chr7 (133-176)||(17610079-17610122)
chr7 (133-176)||(17610322-17610365)
chr7 (114-209)||(17783092-17783187)
chr7 (117-188)||(27215611-27215682)
chr7 (171-209)||(30546413-30546451)
chr7 (128-209)||(31665731-31665813)
chr7 (73-135)||(34635958-34636020)
chr7 (112-209)||(7348151-7348248)
chr7 (142-203)||(17610567-17610628)
chr7 (164-193)||(27570031-27570060)
chr7 (128-193)||(31327482-31327547)
chr7 (128-188)||(27167906-27167966)
chr7 (161-205)||(27903312-27903356)
chr7 (142-198)||(30107160-30107216)
[»] chr5 (54 HSPs)
chr5 (71-209)||(40899944-40900082)
chr5 (73-203)||(2588019-2588142)
chr5 (86-209)||(21060656-21060779)
chr5 (73-209)||(7827877-7828013)
chr5 (73-207)||(4818579-4818713)
chr5 (73-207)||(40530175-40530309)
chr5 (73-202)||(41062114-41062240)
chr5 (80-209)||(1248562-1248691)
chr5 (73-209)||(27542821-27542957)
chr5 (73-207)||(8698337-8698471)
chr5 (92-209)||(6753629-6753745)
chr5 (100-209)||(8724987-8725096)
chr5 (73-209)||(6315728-6315864)
chr5 (72-209)||(27580626-27580763)
chr5 (73-208)||(3348074-3348216)
chr5 (78-197)||(9515784-9515903)
chr5 (95-209)||(15818453-15818569)
chr5 (73-202)||(32440174-32440303)
chr5 (73-203)||(30512636-30512767)
chr5 (73-203)||(30552976-30553107)
chr5 (73-208)||(31655080-31655215)
chr5 (111-203)||(19929978-19930070)
chr5 (90-209)||(29374368-29374487)
chr5 (72-201)||(38508137-38508266)
chr5 (90-205)||(29570422-29570537)
chr5 (95-198)||(2232046-2232149)
chr5 (112-207)||(6615870-6615965)
chr5 (90-209)||(41496106-41496225)
chr5 (100-207)||(42803598-42803705)
chr5 (103-209)||(6754055-6754160)
chr5 (90-209)||(22848352-22848471)
chr5 (84-205)||(41478856-41478978)
chr5 (122-201)||(15439319-15439398)
chr5 (128-209)||(4441047-4441128)
chr5 (73-205)||(41492331-41492464)
chr5 (73-195)||(843480-843599)
chr5 (119-203)||(5731808-5731892)
chr5 (98-209)||(29856073-29856182)
chr5 (128-203)||(18841511-18841586)
chr5 (76-209)||(11904231-11904365)
chr5 (128-209)||(11796173-11796254)
chr5 (128-200)||(37184085-37184157)
chr5 (114-209)||(39213372-39213470)
chr5 (73-179)||(5282398-5282504)
chr5 (128-209)||(26285484-26285565)
chr5 (152-209)||(38161442-38161499)
chr5 (85-149)||(42922830-42922894)
chr5 (136-193)||(11761313-11761369)
chr5 (122-179)||(18890555-18890612)
chr5 (76-148)||(31747969-31748041)
chr5 (120-179)||(9637875-9637934)
chr5 (155-209)||(7330533-7330587)
chr5 (152-209)||(5129262-5129319)
chr5 (114-178)||(20664620-20664683)
[»] chr8 (73 HSPs)
chr8 (73-209)||(10097945-10098081)
chr8 (73-209)||(31231756-31231893)
chr8 (80-200)||(34393915-34394035)
chr8 (73-206)||(2767245-2767378)
chr8 (73-203)||(40996319-40996449)
chr8 (80-208)||(22771796-22771924)
chr8 (84-209)||(13335242-13335367)
chr8 (73-203)||(1875546-1875676)
chr8 (73-209)||(10179901-10180037)
chr8 (88-183)||(36967413-36967508)
chr8 (95-209)||(26626088-26626202)
chr8 (80-205)||(51143-51267)
chr8 (96-209)||(21216078-21216191)
chr8 (73-205)||(39482645-39482777)
chr8 (70-209)||(9300064-9300203)
chr8 (73-208)||(45425620-45425755)
chr8 (73-209)||(11976890-11977026)
chr8 (73-209)||(17719212-17719348)
chr8 (85-209)||(31271047-31271171)
chr8 (125-209)||(44761500-44761584)
chr8 (122-209)||(5053156-5053243)
chr8 (80-209)||(32476313-32476442)
chr8 (73-209)||(31082645-31082781)
chr8 (73-209)||(34948641-34948777)
chr8 (73-208)||(39405789-39405924)
chr8 (68-193)||(7703105-7703230)
chr8 (84-166)||(32678787-32678869)
chr8 (75-196)||(39300894-39301018)
chr8 (81-206)||(42972472-42972595)
chr8 (118-209)||(396610-396701)
chr8 (84-203)||(4428317-4428435)
chr8 (84-209)||(7172940-7173065)
chr8 (101-209)||(14854916-14855024)
chr8 (131-209)||(42887026-42887104)
chr8 (73-173)||(6795999-6796099)
chr8 (73-208)||(27294013-27294148)
chr8 (122-201)||(41092028-41092107)
chr8 (120-209)||(3117021-3117108)
chr8 (128-208)||(44648541-44648621)
chr8 (119-166)||(29226231-29226278)
chr8 (123-205)||(5878993-5879075)
chr8 (122-208)||(31331435-31331521)
chr8 (163-209)||(32678429-32678475)
chr8 (101-199)||(33765696-33765794)
chr8 (90-166)||(1739709-1739785)
chr8 (122-209)||(4924070-4924157)
chr8 (114-193)||(11649650-11649729)
chr8 (134-209)||(17823947-17824022)
chr8 (71-204)||(36006838-36006972)
chr8 (114-183)||(8741079-8741148)
chr8 (125-177)||(5356657-5356709)
chr8 (119-175)||(10953408-10953464)
chr8 (119-175)||(10961413-10961469)
chr8 (112-180)||(40109789-40109857)
chr8 (84-207)||(9839791-9839914)
chr8 (122-189)||(39329065-39329132)
chr8 (128-202)||(40028549-40028623)
chr8 (165-202)||(25284991-25285028)
chr8 (122-206)||(34455688-34455771)
chr8 (73-165)||(6611767-6611859)
chr8 (127-179)||(12559649-12559701)
chr8 (117-161)||(28072135-28072179)
chr8 (169-209)||(29226578-29226618)
chr8 (163-202)||(27870898-27870937)
chr8 (146-209)||(39466064-39466127)
chr8 (115-209)||(135663-135757)
chr8 (111-161)||(9549999-9550049)
chr8 (164-202)||(27976688-27976726)
chr8 (164-202)||(28033957-28033995)
chr8 (117-182)||(28073528-28073593)
chr8 (164-209)||(35732147-35732192)
chr8 (122-182)||(15809985-15810045)
chr8 (118-182)||(34281110-34281173)
[»] scaffold0328 (1 HSPs)
scaffold0328 (71-208)||(7932-8069)
[»] chr3 (62 HSPs)
chr3 (71-209)||(37695616-37695755)
chr3 (73-205)||(19823041-19823173)
chr3 (73-209)||(45710876-45711012)
chr3 (80-209)||(30190620-30190749)
chr3 (73-209)||(37497518-37497654)
chr3 (73-208)||(29023919-29024053)
chr3 (80-209)||(52290919-52291048)
chr3 (80-209)||(53560243-53560372)
chr3 (73-209)||(37311976-37312112)
chr3 (71-209)||(43253814-43253952)
chr3 (73-203)||(8679007-8679137)
chr3 (81-207)||(11905850-11905976)
chr3 (73-203)||(17652784-17652910)
chr3 (73-209)||(34957529-34957665)
chr3 (82-209)||(24569062-24569189)
chr3 (102-209)||(54726511-54726618)
chr3 (81-193)||(10366603-10366715)
chr3 (73-209)||(36476610-36476746)
chr3 (73-209)||(1778669-1778804)
chr3 (73-207)||(38795372-38795506)
chr3 (89-209)||(12736541-12736661)
chr3 (101-209)||(34750522-34750630)
chr3 (73-209)||(44301588-44301724)
chr3 (81-209)||(51837920-51838048)
chr3 (119-209)||(23004381-23004471)
chr3 (81-205)||(37772925-37773049)
chr3 (79-202)||(49830162-49830286)
chr3 (86-209)||(43719293-43719415)
chr3 (73-205)||(11632111-11632242)
chr3 (100-203)||(28690762-28690865)
chr3 (101-206)||(30711102-30711207)
chr3 (75-209)||(27471361-27471495)
chr3 (90-208)||(3313281-3313395)
chr3 (89-208)||(14194583-14194701)
chr3 (73-208)||(36460369-36460504)
chr3 (73-202)||(5322892-5323019)
chr3 (75-209)||(19611935-19612068)
chr3 (127-209)||(54477466-54477548)
chr3 (115-208)||(39931656-39931749)
chr3 (73-202)||(50035170-50035299)
chr3 (122-205)||(30682068-30682151)
chr3 (80-162)||(33491043-33491125)
chr3 (90-182)||(31158492-31158583)
chr3 (138-209)||(39043772-39043846)
chr3 (122-204)||(3901151-3901233)
chr3 (80-209)||(19609325-19609454)
chr3 (73-166)||(51064771-51064864)
chr3 (93-171)||(7757591-7757669)
chr3 (118-208)||(36462944-36463034)
chr3 (123-205)||(27151521-27151605)
chr3 (124-205)||(42278695-42278776)
chr3 (117-207)||(47825087-47825177)
chr3 (141-207)||(54225857-54225923)
chr3 (169-209)||(33491408-33491448)
chr3 (121-188)||(53863984-53864049)
chr3 (140-207)||(47825629-47825696)
chr3 (80-209)||(38137403-38137535)
chr3 (128-193)||(27878724-27878789)
chr3 (122-163)||(45811727-45811768)
chr3 (122-179)||(52206849-52206906)
chr3 (119-203)||(10973568-10973652)
chr3 (89-209)||(48540969-48541089)
[»] scaffold0110 (1 HSPs)
scaffold0110 (73-209)||(1730-1866)
[»] scaffold0583 (1 HSPs)
scaffold0583 (73-205)||(2055-2187)
[»] scaffold0003 (2 HSPs)
scaffold0003 (78-196)||(39127-39245)
scaffold0003 (82-166)||(252491-252575)
[»] scaffold0182 (1 HSPs)
scaffold0182 (73-209)||(20306-20442)
[»] scaffold1391 (1 HSPs)
scaffold1391 (73-200)||(1770-1897)
[»] scaffold0018 (1 HSPs)
scaffold0018 (68-209)||(135985-136126)
[»] scaffold0159 (1 HSPs)
scaffold0159 (73-203)||(33972-34102)
[»] scaffold0302 (1 HSPs)
scaffold0302 (77-200)||(16133-16256)
[»] scaffold0095 (2 HSPs)
scaffold0095 (73-208)||(50231-50366)
scaffold0095 (146-209)||(22374-22437)
[»] scaffold0330 (1 HSPs)
scaffold0330 (70-209)||(5416-5555)
[»] scaffold0294 (1 HSPs)
scaffold0294 (90-200)||(17070-17180)
[»] scaffold0012 (1 HSPs)
scaffold0012 (99-209)||(105710-105820)
[»] scaffold1809 (1 HSPs)
scaffold1809 (133-207)||(697-771)
[»] scaffold0464 (1 HSPs)
scaffold0464 (95-176)||(6260-6341)
[»] scaffold0279 (1 HSPs)
scaffold0279 (119-192)||(12041-12114)
[»] scaffold2146 (1 HSPs)
scaffold2146 (146-205)||(435-494)
[»] scaffold0021 (1 HSPs)
scaffold0021 (119-203)||(126203-126287)
[»] scaffold0188 (1 HSPs)
scaffold0188 (84-179)||(6793-6888)
[»] scaffold0011 (1 HSPs)
scaffold0011 (128-173)||(14178-14223)
[»] scaffold0470 (1 HSPs)
scaffold0470 (73-165)||(1055-1147)
[»] scaffold0001 (1 HSPs)
scaffold0001 (121-165)||(143900-143944)


Alignment Details
Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 40144731 - 40144939
Alignment:
Q  1 tttcaaattattatggtttatttgttcttttcaaattttaatgttgtatcaactatttttggtcaattatactactccctccgtctctaaataatagtcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  40144731 tttcaaattattatggtttatttgttcttttcaaattttaatgttgtatcaactatttttggtcaattatactactccctcaatctctaaataatagtcg 40144830  T
Q  101 tttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    || ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40144831 ttcaagattgatgcacagttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagtta 40144930  T
Q  201 gtggagtag 209  Q
     ||||||||    
T  40144931 atggagtag 40144939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 49223942 - 49224078
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49223942 tactccctccgtctctaaataatagtcgtttaagattgatgcacggttactaagaaaatgattaattgtgttgattttgatggtaaaattagtatcattt 49224041  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||    
T  49224042 actaaaacacccttattaattgtagttagtggagtag 49224078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 37506289 - 37506150
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattag---tatca 169  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||||    
T  37506289 tactccctccgtctctaaataataatcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatgataaaattagtactatca 37506190  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  37506189 tttactaaaacacttttattaattgtagttagtggagtag 37506150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 15699276 - 15699148
Alignment:
Q  82 cgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaa-tgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15699276 cgtctctaaataatagtcgtttaaggttgatgcacagttattaagaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaac 15699177  T
Q  181 acccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||    
T  15699176 acccttattaattgtagttagtggagtag 15699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 32825951 - 32826080
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32825951 tccctccgtcggtaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaat-gtgttgattttgatggtaaaattagtatcatttact 32826049  T
Q  176 aaaacacccttattaattgtagttagtggag 206  Q
    |||||||| |||||||||||| |||||||||    
T  32826050 aaaacacctttattaattgtaattagtggag 32826080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 76 - 209
Target Start/End: Original strand, 20209799 - 20209932
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20209799 tccctccgtctctaaataatagtcgtttaaaggtgatgcaccgttattaagaaaatgattaattatgttgattttgatagtaaaattagtatcatttact 20209898  T
Q  176 aaaacacccttattaattgtagttagtggagtag 209  Q
    |||||| |||||||||||||||||||||||||||    
T  20209899 aaaacatccttattaattgtagttagtggagtag 20209932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 42410156 - 42410027
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  42410156 tactctcttcgtctctaaataatagttgtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattttgatggtaaaattaatatcattt 42410057  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    |||||| |||||||||||||||||||||||    
T  42410056 actaaagcacccttattaattgtagttagt 42410027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 38787503 - 38787367
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  38787503 tactccccccgtctctaaataatagtcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagtatcattt 38787404  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
     | |||||| ||||||||||| |||||||||||||||    
T  38787403 gccaaaacatccttattaattatagttagtggagtag 38787367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 45331502 - 45331370
Alignment:
Q  74 actccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattta 173  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||    
T  45331502 actctctccatctctaaataatagtcgtttaaggttgacgcacggttattaagaaaataattaattatgttgattttgatggtaaaattaatatcattta 45331403  T
Q  174 ctaaaacacccttattaattgtagttagtggag 206  Q
    ||||||||||||||||||||||||||| |||||    
T  45331402 ctaaaacacccttattaattgtagttaatggag 45331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 39864273 - 39864137
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| |||||||||||| |||  |||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  39864273 tactccctccgtctctaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 39864174  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| || ||||||||||||||||||||||||||    
T  39864173 actaaaatactcttattaattgtagttagtggagtag 39864137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 41121778 - 41121917
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaa---ggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||  |||||||   ||||||||||||||||||||||||||||||||||||||| || |    
T  41121778 tactccttccgtctctaaataatagttgtttaaggtttatgcacatttattaattaggaaatgattaattgtgttgattttgatggtaaaattagcataa 41121877  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  41121878 tttactaaaatacccttattaattgtagttagtggagtag 41121917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 16395003 - 16395138
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||| | || ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  16395003 tactccctccgtcttttaaaaatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagtatcattt 16395102  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | |||| ||||||||||||||||||||||    
T  16395103 actaaaata-cctttttaattgtagttagtggagtag 16395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 37276585 - 37276491
Alignment:
Q  111 atgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37276585 atgcacgattattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcgtttactaaaacacccttattaattgtagttagtgga 37276491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 13579577 - 13579712
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||| ||||| || ||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||  || |||| ||||||||    
T  13579577 tactccatccgtctctaagtaataatcatttaaggtttatgcatgattattaaagaaatgattaattgtgttgattttgatgacaatattaatatcattt 13579676  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    || ||||||||| |||||||||||||||||||||||    
T  13579677 acaaaaacacccatattaattgtagttagtggagta 13579712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 12039227 - 12039109
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||| ||||||    
T  12039227 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaatacactcttatt 12039128  T
Q  190 aattgtagttagtggagta 208  Q
    ||||||||||| |||||||    
T  12039127 aattgtagttaatggagta 12039109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 28749153 - 28749024
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| | ||| |||||| ||  |||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  28749153 tactccctccgtctcataatatttgtcatttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 28749054  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    |||||||||||||||||||||||| |||||    
T  28749053 actaaaacacccttattaattgtaattagt 28749024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 31042959 - 31042824
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| ||||| |||||||||  |||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31042959 tactccctccgtctcacaatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcattt 31042860  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||  || ||||||||||||||||| ||||| ||||    
T  31042859 actgtaatacccttattaattgtaggtagtgaagta 31042824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 34031482 - 34031613
Alignment:
Q  73 tactccctccgtctctaaataatagtc-gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    |||||||||||||||||||| |||||| ||||||||||  |||| | |||||||||||||||||| |||||||||||   |||||||||||| |||||||    
T  34031482 tactccctccgtctctaaattatagtctgtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaattaatatcatt 34031581  T
Q  172 tactaaaacacccttattaattgtagttagtg 203  Q
    |||||||| ||| |||||||||||||||||||    
T  34031582 tactaaaataccgttattaattgtagttagtg 34031613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 917179 - 917057
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||| |||||||| ||||||||||||||||  |||||| |||||||  |||||||||||| |||||||||  |||||||||||| |||||||||||||||    
T  917179 tccgcctctaaattatagtcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaattaatatcatttactaaaa 917080  T
Q  180 cacccttattaattgtagttagt 202  Q
     ||||||||||||||||||||||    
T  917079 tacccttattaattgtagttagt 917057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 24991609 - 24991741
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| |||||||||||||||  | |||| |||||||||||||||||||||||||||||||  | |||||||||| ||  ||||    
T  24991609 tactccctccgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattaatagtattt 24991708  T
Q  173 actaaaacacccttattaattgtagttagtgga 205  Q
    |||| |||||| |||||||||||||||||||||    
T  24991709 actacaacacctttattaattgtagttagtgga 24991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 26093545 - 26093421
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    |||||||||||| |||||||||| ||  |||||| |||||||| ||||||||||||||||||||||  |||||||||||| ||||||||| ||||| | |    
T  26093545 tctctaaataatggtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatatc 26093446  T
Q  184 cttattaattgtagttagtggagta 208  Q
    |||||||||||||||||||| ||||    
T  26093445 cttattaattgtagttagtgaagta 26093421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 52429506 - 52429370
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| ||  ||||||||||||  |||||| |||| ||||||||||||||||  |||||||  ||||||||| ||| | ||||||    
T  52429506 tactccctccgtctctaaattattatcgtttaaggtttgtgcacgattatgaaggaaatgattaatttggttgattacgatggtaaatttaatgtcattt 52429407  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||| |||||||||||||||||||||||||||||    
T  52429406 attaaaatacccttattaattgtagttagtggagtag 52429370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 9307772 - 9307653
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||||||  | |||| ||||||||||||||||||| |||||||||||  ||| |||||||| || ||||||||||||||||||| ||    
T  9307772 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaattaatagcatttactaaaacacccttgtt 9307673  T
Q  190 aattgtagttagtggagtag 209  Q
    ||||||||||||||||||||    
T  9307672 aattgtagttagtggagtag 9307653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 31978608 - 31978744
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| |||||||||||| |||  |||||| |||||||| ||| ||||||||||||||||||  |||||||||||| ||||| ||    
T  31978608 tactccctccgtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaattaatatcactt 31978707  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||  |  |||||||||| |||||| ||||||||    
T  31978708 actaaactattcttattaattatagttaatggagtag 31978744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 21909987 - 21910097
Alignment:
Q  98 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 197  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| | |||    
T  21909987 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcgtttgctaaaaca-ccttattaactatag 21910085  T
Q  198 ttagtggagtag 209  Q
    || | |||||||    
T  21910086 tttgaggagtag 21910097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 43500762 - 43500848
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca 181  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  43500762 tagtcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattttgatggtataattagtttcatttactaaaaca 43500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 23168966 - 23169078
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| ||||||||||| |||  |||||| |||||||| |||| |||||||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  23168966 aatattagtcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatccttatt 23169065  T
Q  190 aattgtagttagt 202  Q
    |||| ||||||||    
T  23169066 aattatagttagt 23169078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 30754907 - 30755027
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    |||| ||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| | |||||||||  ||| ||||||||||| |     
T  30754907 gtctttaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatttatattatttactaaaatat 30755006  T
Q  183 ccttattaattgtagttagtg 203  Q
    | ||||||||| |||||||||    
T  30755007 cattattaattatagttagtg 30755027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 207
Target Start/End: Original strand, 33733226 - 33733352
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||| |||| |||||||||||| |||  |||||| |||||||||||||||||| ||||||||||||  |||||||||||| || ||||||||||||    
T  33733226 tccgtctccaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgatta-ttgtgttgatttcaatggtaaaattattaacatttactaaaa 33733324  T
Q  180 cacccttattaattgtagttagtggagt 207  Q
     ||  |||||||||||||||||| ||||    
T  33733325 tacttttattaattgtagttagtagagt 33733352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 36702034 - 36701951
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36702034 ttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtgga 36701951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 36718138 - 36718055
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36718138 ttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtgga 36718055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 10495973 - 10495865
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    |||||||||| ||| | | |||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||    
T  10495973 gtttaaggtttatgtaagattattaaaaaaattattaattttgttgattttgatggtaaaattagtatcatttactaaaaca-ctttattaattgtaatt 10495875  T
Q  200 agtggagtag 209  Q
    ||||||||||    
T  10495874 agtggagtag 10495865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 11450045 - 11449911
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||||||||||| ||||||||||  |||||| |||||||||||||| |||||| |||||||||  ||||||||||||  || ||||    
T  11450045 tactccttccgtctctaaataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaatta--ataattt 11449948  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
     ||| |||||  |||||||||||||||| | ||||||    
T  11449947 tctataacacatttattaattgtagttaatagagtag 11449911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 6267808 - 6267918
Alignment:
Q  69 atactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatc 168  Q
    |||||||| ||| |||||| |||||||||||||||||||||  |||||  || |||| |||||||||||||||||||||||| ||| ||||| |||||||    
T  6267808 atactacttccttcgtctcaaaataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtatc 6267907  T
Q  169 atttactaaaa 179  Q
    || ||||||||    
T  6267908 atgtactaaaa 6267918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 22181460 - 22181371
Alignment:
Q  111 atgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||||||||||||||||||||| ||| ||| ||||  |||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  22181460 atgcacggttattaaggaaatgattagttgagttcatttcaatggtaaaattaatatcatttactaaaacacccttagttattgtagtta 22181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 209
Target Start/End: Complemental strand, 2572626 - 2572495
Alignment:
Q  77 ccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||||| ||||| |||||||||||| |||  || ||| |||||||   ||||||||||||| |||||||  |||||||||||| |||||||||||     
T  2572626 ccctccgtctttaaattatagtcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaattaatatcatttact- 2572528  T
Q  177 aaacacccttattaattgtagttagtggagtag 209  Q
    ||| ||  |||||||||||||||||||||||||    
T  2572527 aaatacaattattaattgtagttagtggagtag 2572495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 5179355 - 5179491
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||| ||||||||||| ||||||||||||||  | |||| || ||||  ||||||||||||||||||||||  || | ||||| ||||||||||    
T  5179355 tactccctccatctctaaataacagtcgtttaaggtttgtacacgattcttaacaaaatgattaattgtgttgatttcaatagcaaaatgagtatcattt 5179454  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||     | ||||||||||||||||||||||||    
T  5179455 actaaagttttcatattaattgtagttagtggagtag 5179491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 6023605 - 6023741
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| |||| |||  |||| ||||||||||| |||  ||| || |||||| ||||||| ||||||||||||||||  |||||||| |||||| | |||    
T  6023605 tactccttccgcctcgcaatattagtcgtttaatgtttgtgcgcgattattacggaaatgtttaattgtgttgatttcaatggtaaatttagtagctttt 6023704  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| ||| |||||||||||||||| ||||||||    
T  6023705 actaaaatacctttattaattgtagttattggagtag 6023741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 44707715 - 44707846
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||||||| ||||||  |||| ||||||||||| |||  |||||| ||||||  ||||||||||||| | |||||||  ||| |||||||||||  |||    
T  44707715 ctactcccttcgtctcataatattagtcgtttaaagtttttgcacgattattatagaaatgattaattatattgatttcaatgataaaattagtagtatt 44707814  T
Q  172 tactaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||  |||||||||||||||||||    
T  44707815 tactaaaacacatttattaattgtagttagtg 44707846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 6160425 - 6160547
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||| |||||||||||||||| |  |  || ||| || ||||| ||||||||||||||||||||||  ||| |||||||||||| ||||||||||| ||    
T  6160425 gtctcaaaataatagtcgtttacgacttgtgtacgatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatac 6160524  T
Q  183 ccttattaattgtagttagtgga 205  Q
     ||||||||||||||||| ||||    
T  6160525 tcttattaattgtagttaatgga 6160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 7759339 - 7759245
Alignment:
Q  111 atgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||| |||||||  |||| |||||||||||||||||  ||||| |||||| ||||||||||||||| || ||||||||||||||||||||||    
T  7759339 atgcacgattattaaaaaaataattaattgtgttgatttcaatggtgaaattaatatcatttactaaaatactcttattaattgtagttagtgga 7759245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 24880992 - 24880902
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||| |||||||||| ||| |||||||||  |||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||    
T  24880992 ttattacggaaatgattgattatgttgatttcaatggtaaaattaatatcatttactaaaatacttttattaattgtagttagtggagtag 24880902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 32970523 - 32970652
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||  |||| |||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||||||  ||| |||||||| ||| ||||    
T  32970523 tactccctctatctcaaaataatattcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattattt 32970622  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    ||||||| || | |||||||||| ||||||    
T  32970623 actaaaatactcgtattaattgttgttagt 32970652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 35367622 - 35367694
Alignment:
Q  95 tagtcgtttaag-gttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    |||||||||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  35367622 tagtcgtttaagcgtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 35367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 4441605 - 4441694
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||||||| |||| |||||||||| ||||||| |||||||||||| |    ||||||||||||||||| |||||||||||||||||||||    
T  4441605 ttattaagaaaataattaattgtggtgattttaatggtaaaattaatcgtctttactaaaacacccttgttaattgtagttagtggagta 4441694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 8896337 - 8896422
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    ||||| |||||||| |||||||||||||  |||||||||||| ||||||||||||||| |   |||||||||||||||||||||||    
T  8896337 ttaagaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatatatttattaattgtagttagtggagt 8896422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 14757610 - 14757686
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||  | | ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  14757610 attaattgtgttgatttcaacgataaaattagtaacatttactaaaacactcttattaattgtagttagtgaagtag 14757686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 43614536 - 43614448
Alignment:
Q  96 agtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccc 184  Q
    |||||||||||| |  | ||||| | |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||    
T  43614536 agtcgtttaaggattgtacacgggttttaaggaaatgattaagtgtgttgattttaatggtaaaattagtatcattgactaaaataccc 43614448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 41080750 - 41080627
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||| |||||||||||| |||||||| ||||| |  | ||||  ||||||||||||||||||||||| || ||||||||  ||||||||| | ||| |     
T  41080750 gtctcaaaataatagtcgattaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatttatatcatttattgaaatat 41080651  T
Q  183 ccttattaattgtagttagtggag 206  Q
    | |||||||||||| |||||||||    
T  41080650 ctttattaattgtaattagtggag 41080627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 3312219 - 3312137
Alignment:
Q  127 gaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||| || |    ||||||||||||||||||||||||    
T  3312219 gaaatgattaattgtgttgattttaatgattaaattagtatcatttactataatattgatattaattgtagttagtggagtag 3312137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 27687404 - 27687298
Alignment:
Q  73 tactccctccgtctctaaataata-gtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    |||||||||||||||||||| ||| ||| |||||||||  |||||  |||||||  ||||||||| ||||||||||||  |||||||||||| ||| |||    
T  27687404 tactccctccgtctctaaattataagtcttttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggtaaaattaatattatt 27687305  T
Q  172 tactaaa 178  Q
    |||||||    
T  27687304 tactaaa 27687298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 12151314 - 12151205
Alignment:
Q  97 gtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgta 196  Q
    |||||||||||||  || | | |||||||||| || ||||||| |||||||||  ||| |||||||||||||||||||||||| |   | ||||||||||    
T  12151314 gtcgtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtatcatttactaaaatattgtaattaattgta 12151215  T
Q  197 gttagtggag 206  Q
    ||||||||||    
T  12151214 gttagtggag 12151205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 29074991 - 29074919
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||| ||||||| || |||||||||| ||||    
T  29074991 aaatgattagttgtgttgattttaatggtaaaattaatatcatttattaaaacatccatattaattgttgtta 29074919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 15444481 - 15444543
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||  |||| |||||||||||    
T  15444481 ggttattaaggaaatgattaatagtgttgattttaatggtaaaatatgtattatttactaaaa 15444543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 7351735 - 7351666
Alignment:
Q  136 aattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||||||| ||| |||||||| ||| ||||||||||| | ||||||||||| |||||||||||    
T  7351735 aattgtgttgattttaatgataaaattaatattatttactaaaataaccttattaattctagttagtgga 7351666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 35367869 - 35367828
Alignment:
Q  168 catttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35367869 catttactaaaacacccttattaattgtagttagtggagtag 35367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 44122332 - 44122248
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat--ttactaaaacacccttattaattgtagtta 200  Q
    |||| ||| |||||||||||| ||||||||||| |||| |||||  |||||||  ||||||||||||||||||||||| ||||||    
T  44122332 gttactaaagaaatgattaatagtgttgattttaatggaaaaatatgtatcatatttactaaaacacccttattaattatagtta 44122248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 44761542 - 44761619
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||| |||| ||||| ||| |||||||| ||||||||||||||| | | ||||||||| |||||||||||    
T  44761542 aaatgattaattatgttaattttaatgataaaattaatatcatttactaaaatatctttattaattatagttagtgga 44761619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 9379345 - 9379263
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgg 204  Q
    |||| |||||||||||||||  ||||||| ||| |||||||| ||||||||| ||||| |   ||||||||||||||||||||    
T  9379345 ttaaagaaatgattaattgtaatgattttaatgataaaattaatatcatttattaaaatatatttattaattgtagttagtgg 9379263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 27897068 - 27896982
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||||||||| |||||  ||||||||||| ||| |||||||||||| |||||  |||| |  |||||||||| ||||||||||||||    
T  27897068 ttaaggaaataattaaacgtgttgattttaatgataaaattagtataatttatcaaaatattcttattaattatagttagtggagta 27896982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 29778431 - 29778481
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  29778431 atggtaaaattagtatcatttactaaaatatcattattaattgtagttagt 29778481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 17988572 - 17988652
Alignment:
Q  131 tgattaattgtgttgattttgatggtaaaattag--tatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||  ||| |||||||||  ||| ||||||||||| || ||||||||||||||||| || |||||    
T  17988572 tgattaattgtgttgatttcaatgttaaaattagtatattatttactaaaatactcttattaattgtagttaatgaagtag 17988652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 22856276 - 22856329
Alignment:
Q  156 taaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||| || |||||||||||| ||||| |||||||||||||||||||||||    
T  22856276 taaaattaataccatttactaaaataccctaattaattgtagttagtggagtag 22856329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 35682762 - 35682866
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||| |||| ||||||||||||| || | ||| |||||| || |||| |||| ||||||||||||||||||  ||| ||| |||||||||||||    
T  35682762 tactccttccatctcaaaataatagtcgtataggtttg-tgcacgatttttaacgaaaagattaattgtgttgatttcaatgataacattagtatcattt 35682860  T
Q  173 actaaa 178  Q
    | ||||    
T  35682861 attaaa 35682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 11642283 - 11642195
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagc 210  Q
    |||||||||| |||||||||||  |||||||||| |||||||||    ||| ||||||||||||||  ||||||||| |||||||| |||||||    
T  11642283 ggttattaagaaaatgattaatattgttgattttaatggtaaaa----tat-atttactaaaacacatttattaattatagttagtagagtagc 11642195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 13365999 - 13366042
Alignment:
Q  167 tcatttactaaaacacccttattaattgtagttagtggagtagc 210  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  13365999 tcatttactaaaatacccttattaatagtagttagtggagtagc 13366042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 31154235 - 31154164
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||||||||||||||||||| ||| |||||||||||| || |||||||   |  |||||||||||||||    
T  31154235 aaatgattaattgtgttgattttaatgataaaattagtattatctactaaattgcatttattaattgtagtt 31154164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 34688857 - 34688932
Alignment:
Q  127 gaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||||||  ||||||||  ||| ||||||||||||| ||||||||| ||  |||||||||| ||||||||    
T  34688857 gaaatgattaatttggttgatttaaatgataaaattagtatcgtttactaaaccaggcttattaattttagttagt 34688932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 34693385 - 34693460
Alignment:
Q  127 gaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||||||  ||||||||  ||| ||||||||||||| ||||||||| ||  |||||||||| ||||||||    
T  34693385 gaaatgattaatttggttgatttaaatgataaaattagtatcgtttactaaaccaggcttattaattttagttagt 34693460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 44426746 - 44426827
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaatt---agtatcatttactaaaacacccttattaattgtagttagtggag 206  Q
    |||| |||| ||| ||||||||  |||||||||||   ||||||||||||||||||| | |||||||||||| |||||||||    
T  44426746 aaataattagttgagttgatttcaatggtaaaatttgtagtatcatttactaaaacatctttattaattgtaattagtggag 44426827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 45615644 - 45615557
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| |||||||||  |||||| ||||| ||  |||||  ||| |||||||||||||  ||||||||||| ||||||||||||||||    
T  45615644 ttaagaaaatgattagctgtgttaattttaattataaaaggagtttcatttactaaaattcccttattaatagtagttagtggagtag 45615557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 35538756 - 35538678
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||| |||| |||||||||||||||||  ||| ||||||   ||| ||||||||||| | ||||||||||||||||||    
T  35538756 ttaagaaaattattaattgtgttgatttcaatgataaaatggatattatttactaaaatatccttattaattgtagtta 35538678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 49177037 - 49176943
Alignment:
Q  115 acggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||||||||| ||||||  |||||||||  | ||||||||  || ||||||||||||| || |||||||||| |||||| | ||||||    
T  49177037 acgggtattaaggaaataattaataatgttgatttcaaaggtaaaatatgtgtcatttactaaaatactcttattaattatagttaatagagtag 49176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 26120451 - 26120528
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||| || |||||||||||| |||||  ||| ||| ||||||||||||  ||||||||| |||| ||||||    
T  26120451 aaatgattaatcgtattgattttgatgataaaacgagtttcaattactaaaacacttttattaattatagtcagtgga 26120528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 978862 - 978946
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggag 206  Q
    ||||| ||||||||| ||||||||||||  ||| ||||||  || ||||||| | ||| | |||||||||| |||||||||||||    
T  978862 ttaagaaaatgattagttgtgttgatttcaatgataaaatgtgtttcatttaatgaaatatccttattaatagtagttagtggag 978946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 26000810 - 26000846
Alignment:
Q  143 ttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26000810 ttgattttgatggtaaaattattatcatttactaaaa 26000846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 26257945 - 26258025
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||| ||||||||||||||| |||||||  || | ||||| | ||||||||||||||| ||| |||||||| || ||||||    
T  26257945 ttaaagaaatgattaattgtattgatttcaatagcaaaatgattatcatttactaaaatacctttattaatcgtggttagt 26258025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 51028500 - 51028576
Alignment:
Q  124 aaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||||| ||||||||||||||||||| ||  |||| |||||| |||||| ||||| |   ||||||||||||||||    
T  51028500 aaggaaacgattaattgtgttgattttaataataaagttagtagcatttattaaaatatttttattaattgtagtta 51028576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 3260738 - 3260620
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttatt-aaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||||||||||||||||||||| ||  || | | || || || |||||||||| ||||||||||||  ||  ||||| |||||| | |||||||         
T  3260738 tctctaaataatagtcgtttaagatttgtgtatgattttttaaagaaatgattagttgtgttgatttcaataataaaagtagtattaattactaa----- 3260644  T
Q  183 ccttattaattgtagttagtggag 206  Q
    ||||||||||||||||||||||||    
T  3260643 ccttattaattgtagttagtggag 3260620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 6365738 - 6365663
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    ||||||||||||||||||||||  ||  | |||||||||| ||||| ||||| | | || ||||||||||||||||    
T  6365738 aaatgattaattgtgttgatttcaataatcaaattagtattatttattaaaatatcattgttaattgtagttagtg 6365663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 32219696 - 32219751
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||||||||||| ||||||||| ||||| || |||||||||| ||||| |||||||    
T  32219696 atggtaaaattaatatcatttattaaaatactcttattaattatagtttgtggagt 32219751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 27721634 - 27721565
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    ||||| |||||||||||| |||||||||||| | | ||||| ||||  |||  |||||||||||||||||    
T  27721634 attaaatgtgttgattttaatggtaaaattatttttatttattaaagtaccaatattaattgtagttagt 27721565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 52837363 - 52837306
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||| | |||  |||||||| || |||||||||||||| |||||||||||    
T  52837363 atggtaaaattaatttcaactactaaaatactcttattaattgtagctagtggagtag 52837306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 15057531 - 15057456
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||  ||||||||| || |||||||||||||||| || |||||||   ||||||||| |||||| ||||||||    
T  15057531 attaattaagttgattttaatagtaaaattagtatcatatattaaaacatttttattaattatagtta-tggagtag 15057456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 26255977 - 26256029
Alignment:
Q  98 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgatttt 150  Q
    |||||||||||| ||||||| | ||| | ||||||||||||| ||||||||||    
T  26255977 tcgtttaaggtttatgcacgatcatttatgaaatgattaattatgttgatttt 26256029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 47772970 - 47773114
Alignment:
Q  65 aattatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattag 164  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  47772970 aattatagtactccctccgtctctaaataatagtcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattag 47773069  T
Q  165 tatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  47773070 tatcatttactaaaacacccttattaattgtagttagtggagtag 47773114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 17114605 - 17114466
Alignment:
Q  70 tactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17114605 tactactccctccgtctttaaataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 17114506  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17114505 tttactaaaacacccttattaattgtagttagtggagtag 17114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 11907558 - 11907694
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11907558 tactccctccgtctctaaataatagtcatttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 11907657  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||| ||||||||    
T  11907658 actaaaacacccttattaattgtagttattggagtag 11907694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 52859758 - 52859894
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52859758 tactccctccgtctctaaataatagtcgcttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 52859857  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||||||||||||||    
T  52859858 actaaaacatccttattaattgtagttagtggagtag 52859894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 33790690 - 33790826
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  33790690 tactcccttcgtctctaaataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcattt 33790789  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
     ||||||||||||||||||||||||||||||||||||    
T  33790790 gctaaaacacccttattaattgtagttagtggagtag 33790826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 38405055 - 38405197
Alignment:
Q  67 ttatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    ||||| |||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||  |||||||||||| ||    
T  38405055 ttatagtactccctccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaattaata 38405154  T
Q  167 tcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  38405155 tcatttactaaaatacccttattaattgtagttagtggtgtag 38405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 6609924 - 6609787
Alignment:
Q  73 tactccctccgtctctaaataatagt-cgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6609924 tactccctccgtctctaaataatagttcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 6609825  T
Q  172 tactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||| |||||| | |||||||||||| ||| ||||||||    
T  6609824 tacaaaaacatctttattaattgtaattattggagtag 6609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 2066951 - 2066815
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2066951 tactccatccatctttaaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattattt 2066852  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||||||||||||||||| |||||||||| ||||    
T  2066851 attaaaacacccttattaattttagttagtggggtag 2066815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 49428301 - 49428436
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  49428301 tactccctccgtctctaaattatagtcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataattt 49428400  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||| ||||||||||||||||||||||||||||    
T  49428401 actaaaatacccttattaattgtagttagtggagta 49428436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 38502441 - 38502577
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38502441 tactctctccgtctctaaataatagtcgtttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcattt 38502540  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||| ||  ||||||||| |||||| || |||||    
T  38502541 attaaaatacttttattaattatagttaatgtagtag 38502577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 3689709 - 3689590
Alignment:
Q  88 taaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccctta 187  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  3689709 taaataatagtcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattttgatggtaaaattagtatcatttactaaaacactctta 3689610  T
Q  188 ttaattgtagttagtggagt 207  Q
    |||||| |||||||| ||||    
T  3689609 ttaattatagttagttgagt 3689590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 5841386 - 5841522
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||   |||||||||||||||| |||| ||||||||| |||||||||||| ||||||||    
T  5841386 tactctctccgtctctaaattatagtcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaattaatatcattt 5841485  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| |||||||||||||||||||||||||||||    
T  5841486 actaaaatacccttattaattgtagttagtggagtag 5841522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 25233337 - 25233207
Alignment:
Q  79 ctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    |||||||||||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  25233337 ctccgtctctaaataatattcgtttaaggttgatgtacagttattaaagaaataattaattgtgttaattttgatggtaaaattagtatcatttactaaa 25233238  T
Q  179 acacccttattaattgtagttagtggagtag 209  Q
    ||||   |||||||| ||||||||| |||||    
T  25233237 acactagtattaattatagttagtgaagtag 25233207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 32884963 - 32884827
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||||||||||  |||| |||||||||||||||  |||||| |||||||| ||||||||||||||||||||||  |||||| |||||||| |||||    
T  32884963 tacttcctccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagtagcattt 32884864  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | |||||||| ||||||||||||||||||||||||||    
T  32884863 agtaaaacactcttattaattgtagttagtggagtag 32884827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 34360817 - 34360681
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| || |||||||| |||  |||||| ||||||| ||||||||||||||| |||||||  ||||||||||||||| |||||    
T  34360817 tactccctccgtctcacaatattaatcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagtagcattt 34360718  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||| ||||||||||||||||||||||||||    
T  34360717 actaaaacactcttattaattgtagttagtggagtag 34360681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 52247387 - 52247523
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| |||||||||||||| |  |||||| |||||||| ||||||||||||||||| ||||  |||||||||||| ||  ||||    
T  52247387 tactccctccgtctctaaattatagtcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaattaatacaattt 52247486  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | |||||||||||||||||||||||||||    
T  52247487 actaaaatatccttattaattgtagttagtggagtag 52247523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 22130210 - 22130070
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgt----gttgattttgatggtaaaattagtat 167  Q
    ||||||| ||||||||  |||| |||||||||||||||  ||||||||||||||||||||||||||||||    ||||||||  |||||| |||||||||    
T  22130210 ctactccatccgtctcacaatattagtcgtttaaggtttgtgcacggttattaaggaaatgattaattgtatgtgttgatttcaatggtataattagtat 22130111  T
Q  168 catttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  22130110 catttacaaaaacatccttattaattgtagttagtggagta 22130070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 44536182 - 44536292
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |  ||||| |||||||||||||||||||||||||    
T  44536182 gtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattagcaggatttattaaaacacccttattaattgtagtt 44536281  T
Q  200 agtggagtagc 210  Q
    |||||||||||    
T  44536282 agtggagtagc 44536292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 7061623 - 7061755
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||| |||||  |||| |||||||||||||||  | |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  7061623 tactccctctgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcattt 7061722  T
Q  173 actaaaacacccttattaattgtagttagtgga 205  Q
    |||| || | | |||||||||||||||||||||    
T  7061723 actataatatctttattaattgtagttagtgga 7061755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 17237255 - 17237391
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| ||||| |||||||||  |||| | |||||||| |||| ||||||||||||||||   ||||||||||||||| |||||    
T  17237255 tactccctccgtctcacaatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacattt 17237354  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||||||||||||||    
T  17237355 actaaaacaaccttattaattgtagttagtggagtag 17237391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 40122830 - 40122946
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||| ||  |||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  40122830 aatattagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagtagcatttactaaaacacccttatt 40122929  T
Q  190 aattgtagttagtggag 206  Q
     ||||||||||||||||    
T  40122930 gattgtagttagtggag 40122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 28500856 - 28500979
Alignment:
Q  79 ctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    |||||||||||||| |||| ||||||| |||  |||||| ||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||    
T  28500856 ctccgtctctaaattatagccgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaa 28500955  T
Q  179 acacccttattaattgtagttagt 202  Q
    | |||||||||||||| |||||||    
T  28500956 atacccttattaattgcagttagt 28500979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 47464341 - 47464460
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||||||   ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| || ||||||    
T  47464341 aatattagtcgtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaactcttatt 47464440  T
Q  190 aattgtagttagtggagtag 209  Q
    |||||||||| |||||||||    
T  47464441 aattgtagttggtggagtag 47464460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 21240709 - 21240799
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  21240709 ttattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcatttactaacacatccttattaattgtagttagttgagtag 21240799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 36985953 - 36985819
Alignment:
Q  68 tatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 167  Q
    |||| ||||||||||||||| |||||||| ||||||||| ||  |  ||| || || |||||||||||||||||||||||||  ||||||||||||||||    
T  36985953 tatagtactccctccgtctcaaaataatactcgtttaagatttttatacgatttttcaggaaatgattaattgtgttgatttcaatggtaaaattagtat 36985854  T
Q  168 catttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||||| |||| |||||||||||||||||    
T  36985853 catttactaaaatacccgtattaattgtagttagt 36985819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 43237405 - 43237269
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||||||||||  |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||  ||||    
T  43237405 tactgcctccgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagtaatattt 43237306  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | | ||||||||| ||||||||| |||||    
T  43237305 actaaaaaatcattattaattatagttagtgaagtag 43237269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 6643619 - 6643750
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| |||||||||  |||| |||| |||||| |||   ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  6643619 tactcactccgtctcacaatattagtagtttaatgtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 6643718  T
Q  173 actaaaacacccttattaattgtagttagtgg 204  Q
    ||||||||| | ||||||||||||||||||||    
T  6643719 actaaaacatctttattaattgtagttagtgg 6643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 16821290 - 16821425
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  || | |||||||||||||||  |||||| ||||||| | |||||||||||||||||||||  ||| |||||||||||||||||    
T  16821290 tactccctccgtctcacaaaattagtcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtatcattt 16821389  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||| || | ||||||||||| ||||||||||||||    
T  16821390 actataatatccttattaattatagttagtggagta 16821425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 207
Target Start/End: Original strand, 2942611 - 2942737
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||  |||| |||||||||||||||  |  | | ||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  2942611 tccgtctcacaatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagtagcatttactaaaa 2942710  T
Q  180 cacccttattaattgtagttagtggagt 207  Q
    || |||||||||||||||||||||||||    
T  2942711 ca-ccttattaattgtagttagtggagt 2942737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 26147635 - 26147709
Alignment:
Q  134 ttaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26147635 ttaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtagttagtggagta 26147709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 35380333 - 35380426
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||| |||||||| |||||||||||| |||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  35380333 cacgattattaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttactaaaacatcattattaattgtagttagtggagt 35380426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 209
Target Start/End: Complemental strand, 2653575 - 2653446
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    ||||||||||||||||||||| ||||||| ||  |||| | |||||||  ||||||||||||||||||||||  || ||||||||||||||||||| |||    
T  2653575 cctccgtctctaaataatagttgtttaagatttgtgcatgattattaa--aaatgattaattgtgttgatttcaattgtaaaattagtatcatttattaa 2653478  T
Q  178 aacacccttattaattgtagttagtggagtag 209  Q
    || || |||||||||||||||||  |||||||    
T  2653477 aatactcttattaattgtagttaaaggagtag 2653446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 209
Target Start/End: Original strand, 49175909 - 49176029
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||||||||||||||||||  |||| | || ||||| |||||||||||||||  |||||  ||| |||||||||||||||||||||||| | ||||||    
T  49175909 aaataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtatcatttactaaaataaccttat 49176008  T
Q  189 taattgtagttagtggagtag 209  Q
    ||||||||||||| |||||||    
T  49176009 taattgtagttagcggagtag 49176029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 35311182 - 35311317
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||   |||| ||  |||||||||||  |||||| ||||||||||||||||||||| |||| ||||  |||||||||||| |  |||||    
T  35311182 tactccctccgtcttacaatattaagcgtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaattaattgcattt 35311281  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||| ||||| |||||||||||||||||||||||||    
T  35311282 actagaacactcttattaattgtagttagtggagta 35311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 46396842 - 46396969
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||| ||||||  |||| | | |||||||||||  |||||| | |||||| ||||||||||||||||||||||  |||||||||||| || |||||    
T  46396842 tactcccttcgtctcacaatatttgccgtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcattt 46396941  T
Q  173 actaaaacacccttattaattgtagtta 200  Q
    |||||||||| |||||||||||||||||    
T  46396942 actaaaacactcttattaattgtagtta 46396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 51625235 - 51625136
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    |||||||||| |||||||||||| |||  |||||| |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  51625235 gtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaacac 51625136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 4972723 - 4972595
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||||| ||||||||  |||| |||||||||||| ||  |||||| ||||||| |||||||||||||||||||||||  || | |||||| ||  ||||    
T  4972723 ctactccatccgtctcacaatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaattgaaaaattggtgacatt 4972624  T
Q  172 tactaaaacacccttattaattgtagtta 200  Q
    ||||||||||| |||||||||||||||||    
T  4972623 tactaaaacactcttattaattgtagtta 4972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 11288589 - 11288724
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||| ||||| ||| ||| |||||||||||| ||| ||| |||||||| |||||||||||||| |||||||  |||| ||||||| ||||||||    
T  11288589 tactccatccatctctgaattataatcgtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatggcaaaattaatatcattt 11288688  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| |  |||||||||||||||| |||||||||    
T  11288689 actaaaata-tcttattaattgtagttggtggagtag 11288724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 42616875 - 42616998
Alignment:
Q  86 tctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccct 185  Q
    ||||||| ||||||||||||| ||  |||| | ||||||| ||||||||||| |||||||||||  |||||||||||| ||||||||||||||| |   |    
T  42616875 tctaaattatagtcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaattaatatcatttactaaaatatttt 42616974  T
Q  186 tattaattgtagttagtggagtag 209  Q
    ||||||||||||| ||||||||||    
T  42616975 tattaattgtagtaagtggagtag 42616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 42517598 - 42517727
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||| || ||||||| ||||||  |||| |||  | |||| |||||||| ||||||||||||||||||||||  ||||||||||||  |||||||    
T  42517598 tactccctctgt-tctaaattatagtcaattaatgtttgtacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcattt 42517696  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    ||||||| ||||||||||||| |||||||||    
T  42517697 actaaaatacccttattaattatagttagtg 42517727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 54506935 - 54506814
Alignment:
Q  88 taaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccctta 187  Q
    |||| |||||||||||||| ||  |  |||||||||||| |||||||||| |||||||||||  |||||||||||| ||||||||| ||||| | | |||    
T  54506935 taaaaaatagtcgtttaagatttgtttacggttattaagaaaatgattaactgtgttgatttcaatggtaaaattaatatcatttattaaaatatcatta 54506836  T
Q  188 ttaattgtagttagtggagtag 209  Q
    | ||||||||||||||||||||    
T  54506835 tcaattgtagttagtggagtag 54506814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 30682176 - 30682291
Alignment:
Q  94 atagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||||||||  ||||||  ||||||  ||||||||||||||||| |||||  ||||||||||| |||||||||||| || | |||||||| ||    
T  30682176 atagtcgtttaaggtttttgcacgactattaaaaaaatgattaattgtgttaattttattggtaaaattaatatcatttactataatatccttattagtt 30682275  T
Q  194 gtagttagtggagtag 209  Q
    ||||||||| ||||||    
T  30682276 gtagttagtagagtag 30682291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 53346904 - 53346785
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||  ||  |||||| |||||||| |||| ||| ||||||||  |||  |||||||||||| || ||||||||||||||||||||||    
T  53346904 aatattagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggtaaaattaatagcatttactaaaacacccttatt 53346805  T
Q  190 aattgtagttagtggagtag 209  Q
    |||| |||||||||||||||    
T  53346804 aattttagttagtggagtag 53346785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 32469962 - 32470034
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||  |||||||| ||||||||    
T  32469962 aaatgattaattgtgttgattttaatggtaaaattagtatcatttattaaaacattcttattaactgtagtta 32470034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 48914102 - 48914242
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagt-----at 167  Q
    ||||||||||| ||| ||||||||  || |||||||| |||||| ||| |||||||||| |||||||||||| ||||  ||||||||||||||     ||    
T  48914102 tactccctccgactcaaaataatatgcggttaaggtttatgcacagtttttaaggaaataattaattgtgttcatttcaatggtaaaattagtactccat 48914201  T
Q  168 catttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||| |||||||| | |||||||| |||||||||||| ||||    
T  48914202 catatactaaaatatccttattatttgtagttagtgaagta 48914242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 23915434 - 23915525
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||  || | ||||||||||||| | ||||||||| |||||||||||||||    
T  23915434 gttattaaggaaatgattagtagtgttgattttaatggtaaaatatgtttaatttactaaaacatcattattaattatagttagtggagtag 23915525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 209
Target Start/End: Complemental strand, 462117 - 461984
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||||||||||| ||||||||||  |||||| ||  ||||   || ||||| |||||||||||||| |||||||  ||||||||| || ||| |||||||    
T  462117 tccctccgtctcgaaataatagtaatttaagatttgtgcataatttttaagaaaatgattaattgtattgatttcaatggtaaaagtaatattatttact 462018  T
Q  176 aaaacacccttattaattgtagttagtggagtag 209  Q
    |||| | |||||||||||||| |||| |||||||    
T  462017 aaaatatccttattaattgtaattagcggagtag 461984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 52869212 - 52869107
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    |||||||||||||||  |||||  ||||||||||||| |||||||||||||||||  || |||| |||| |||| |||| ||||| ||| ||||||||||    
T  52869212 tagtcgtttaaggtttgtgcacaattattaaggaaataattaattgtgttgatttcaatagtaagattaatatcgtttattaaaatacctttattaattg 52869113  T
Q  195 tagtta 200  Q
    ||||||    
T  52869112 tagtta 52869107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 39157873 - 39157969
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttga-ttttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||||| ||||||||| ||||||| | |||||||||||||||| || ||||||||||||| || |||||||||| ||| |||| ||||||    
T  39157873 cacgattattaagaaaatgattagttgtgtttaattttgatggtaaaatttgtttcatttactaaaatacacttattaattatagctagtagagtag 39157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 39397489 - 39397379
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    ||||||| |||||||| |||  |||||| |  |||||||||||||||||| |||||||||   ||||||| ||| | |||||||||||||  ||| ||||    
T  39397489 aataataatcgtttaaagtttgtgcacgatgtttaaggaaatgattaattatgttgatttcattggtaaatttaatgtcatttactaaaatccccatatt 39397390  T
Q  190 aattgtagtta 200  Q
    |||||||||||    
T  39397389 aattgtagtta 39397379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 8175542 - 8175659
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||||| ||||| |||||||||| ||||| || |  |||| | |||||||  |||||| |||||||||||||||  |||||||||||| ||||||||| |    
T  8175542 tccctctgtctcaaaataatagttgtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggtaaaattaatatcatttatt 8175641  T
Q  176 aaaacacccttattaatt 193  Q
    |||| || ||| ||||||    
T  8175642 aaaatactcttgttaatt 8175659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 27880199 - 27880323
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    ||||||| ||| || || |||||||||||||||||||||  |  | | || ||||  ||||||||| ||||||||||||  |||||||||||||||||||    
T  27880199 actactctctctgtttcaaaataatagtcgtttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggtaaaattagtatcat 27880297  T
Q  171 ttactaaaacacccttattaattgta 196  Q
    |||||| || || ||||| |||||||    
T  27880298 ttactagaatactcttatcaattgta 27880323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 41711426 - 41711514
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||| |||||| ||||||||||  |||||  || ||| |||||||||||||| |||||||||| |||||||||||| ||||||||    
T  41711426 tctcaaaacaatagttgtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaattaatatcattt 41711514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 17512353 - 17512424
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||||| ||| ||||||||| | |||||||||| ||| ||||||||||| ||| |||||||||||||||    
T  17512353 aaatgattagttgagttgattttaaaggtaaaattaatataatttactaaaataccattattaattgtagtt 17512424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 29295307 - 29295253
Alignment:
Q  141 tgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgta 196  Q
    |||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  29295307 tgttgatttttatggtaaaattagtatcatttactaaaaca-tcttattaattgta 29295253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 50264102 - 50264169
Alignment:
Q  136 aattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    ||||||||||||||  ||| ||||||||  |||||||||||||| || ||||||||||||||||||||    
T  50264102 aattgtgttgatttcaatgttaaaattaacatcatttactaaaatactcttattaattgtagttagtg 50264169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 18532341 - 18532207
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| |||||||| |||||||||| ||||||||||  |||| | || |||   |||||||||||| | |  ||||| |||||||||||||||| ||||    
T  18532341 tactccatccgtctcaaaataatagttgtttaaggtttgtgcatgatttttacataaatgattaattatataaattttaatggtaaaattagtatgattt 18532242  T
Q  173 actaaaacacccttattaattgtagttagtggagt 207  Q
    | ||||| |   ||||||||| |||| ||||||||    
T  18532241 attaaaatagttttattaattatagtaagtggagt 18532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 30192318 - 30192232
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||| ||||||||||||||||||||||  ||  |||||||| | |||||| |||||| |  ||||||||||||||||||| |||||    
T  30192318 ttaagaaaatgattaattgtgttgatttcaattataaaattaatgtcatttgctaaaatattcttattaattgtagttagtagagta 30192232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 50263890 - 50263968
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgatttt 150  Q
    ||||||| | ||| ||||||| ||||||||||||||||  |||||| |||||||| |||||||| | ||||||||||||    
T  50263890 ctactccatacgtttctaaattatagtcgtttaaggtttgtgcacgattattaagaaaatgattcactgtgttgatttt 50263968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 19265931 - 19265834
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||| |||||||||||| | || ||||  ||  |||||||| | | ||||| ||||| | ||||||||||| |||||||||||||||    
T  19265931 tgcacggttattaagaaaatgattaattatatttatttcaataataaaattaatgttatttattaaaataaccttattaattatagttagtggagtag 19265834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 21325171 - 21325224
Alignment:
Q  121 attaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttac 174  Q
    |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  21325171 attaaggaaatgataaattgtgtttatttcaatggtaaaattagtatcatttac 21325224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 49747068 - 49746987
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||||||||||||||  ||| |||||||||||  ||||||||||| ||| | ||||||| |||||||| ||||||    
T  49747068 aaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaataccttcattaattatagttagttgagtag 49746987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 53412254 - 53412138
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||||||| ||||| | || | | ||| || ||||| ||| |||||||| | |||||||  |||||||||||||||||||||||||||| |   ||||    
T  53412254 aaataatagttgtttacgatttacgtacgatttttaagaaaacgattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttttat 53412155  T
Q  189 taattgtagttagtgga 205  Q
    ||||| ||||| |||||    
T  53412154 taattatagtttgtgga 53412138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 5618680 - 5618573
Alignment:
Q  97 gtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgta 196  Q
    ||||||||| |||  ||| || |||||||  ||||||| | ||||||||||||| ||||||||||||  || ||||| ||||| | |||||||||||||     
T  5618680 gtcgtttaatgtttgtgctcgattattaaaaaaatgatgagttgtgttgattttaatggtaaaattaaaattatttattaaaatatccttattaattgtt 5618581  T
Q  197 gttagtgg 204  Q
    || |||||    
T  5618580 gtgagtgg 5618573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 34321716 - 34321788
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    |||||||| ||||||||||||||||||||||| ||||||||||  || |  |||||||||||||  |||||||||    
T  34321716 ttattaagaaaatgattaattgtgttgattttaatggtaaaat--gtgtactttactaaaacacatttattaatt 34321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 38663485 - 38663535
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    ||||||||||||||| |||||||||||||||  |||||||| |||||||||    
T  38663485 atggtaaaattagtagcatttactaaaacacttttattaatcgtagttagt 38663535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 20612185 - 20612254
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 197  Q
    ||||||||| ||| ||||||||   || |||| ||||||| ||||||||||||||| |||||||||||||    
T  20612185 aaatgattagttgagttgatttcattgctaaagttagtataatttactaaaacaccattattaattgtag 20612254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 47358958 - 47359043
Alignment:
Q  123 taaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||| |||| ||| |||||||||||||  ||| ||||||||| || |||| |||||| ||  |||||||||||||| |||||||||    
T  47358958 taagaaaattattgattgtgttgatttcaatgataaaattagaataattttctaaaatacttttattaattgtagtcagtggagta 47359043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 49579192 - 49579264
Alignment:
Q  128 aaatgattaattgtgttga-ttttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| | ||||||||||||  ||||||||||||||||    
T  49579192 aaatgattaattgtgttgatttttaatgataaaattattatta-ttactaaaacacttttattaattgtagtta 49579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 3670025 - 3669965
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 149  Q
    |||||||||||||||||| || ||||| | || ||||  ||||||||||||||||||||||    
T  3670025 aaataatagtcgtttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 7270453 - 7270538
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagta----tcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| ||||| ||||| ||||||||||  |||    ||||||||||||||||  ||||||||| |||||||||| ||||    
T  7270453 aaatgattaatagtgttaattttaatggtaaaatatgtacatatcatttactaaaacacatttattaattatagttagtggtgtag 7270538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 11024897 - 11024985
Alignment:
Q  121 attaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||| ||||||||||| ||||||||||| |||||| |||  || ||||||||||||| |   ||||||||| || |||||| |||||    
T  11024897 attaagaaaatgattaatagtgttgattttaatggtataatatgtttcatttactaaaatatttttattaattataattagtgaagtag 11024985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 25141889 - 25141949
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 149  Q
    ||||||||||||||||||||| ||  ||| || ||||| |||||||||| |||||||||||    
T  25141889 aaataatagtcgtttaaggtttatatacgatttttaagaaaatgattaaatgtgttgattt 25141949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 13016474 - 13016403
Alignment:
Q  79 ctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgatttt 150  Q
    |||||||||  ||||||||| ||||||||||   |||| ||| ||||||||||||||||||  |||||||||    
T  13016474 ctccgtctcagaataatagttgtttaaggtttgagcacagtttttaaggaaatgattaatttggttgatttt 13016403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 18741514 - 18741569
Alignment:
Q  154 ggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||| ||||||| ||||| | | |||||||||||||||| ||||||||    
T  18741514 ggtaaaattagtgtcatttattaaaatatctttattaattgtagttaatggagtag 18741569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 35252045 - 35251934
Alignment:
Q  79 ctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    ||||||||| |||| |||||||||| || ||  |||| | || | ||| |||| |||||||||| | ||||  ||| |||||||| ||||||||||||||    
T  35252045 ctccgtctcaaaattatagtcgtttgagatttgtgcatgattttcaagaaaataattaattgtggttatttcaatgataaaattaatatcatttactaaa 35251946  T
Q  179 acacccttatta 190  Q
    | ||| ||||||    
T  35251945 ataccattatta 35251934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 50443089 - 50443038
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccc 184  Q
    |||||| ||||||||||| ||||||||||  |||| ||||||||||||||||    
T  50443089 attaatagtgttgattttaatggtaaaatctgtatgatttactaaaacaccc 50443038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 2400890 - 2400804
Alignment:
Q  123 taaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| ||||||| | |||| || ||| | |||||| |||||  || ||||||||||||||||| ||| ||||||||| |||||||||    
T  2400890 taagaaaatgatcagttgtattaattataatggtacaattaacattatttactaaaacaccctcattgattgtagtttgtggagtag 2400804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 7987074 - 7987000
Alignment:
Q  135 taattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| ||||||||||| ||| ||||||||||||||| |||||||| |   ||||||||| | |||||| ||||||    
T  7987074 taatagtgttgattttaatgataaaattagtatcatctactaaaatattattattaattattgttagtagagtag 7987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 16506281 - 16506327
Alignment:
Q  162 tagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||| |||||||||||||||  |||||||||||||||| |||||||    
T  16506281 tagtaacatttactaaaacacatttattaattgtagttaatggagta 16506327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 29575229 - 29575143
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||| ||| |||| |||||||||||| |||| ||||  ||| |||||||| || |||||| ||||| || ||| |||||||||||||    
T  29575229 cacgattactaagaaaatgattaattatgttaatttaaatgataaaattaataacatttattaaaatactcttgttaattgtagtta 29575143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 35998927 - 35998837
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||  |||| |||| || |||||||||| |  |||||||||||| |||||| ||||| | | |||||||||||||||  ||||||||    
T  35998927 ttattaaaaaaattattatttatgttgattttaacagtaaaattagtaacatttattaaaatatcattattaattgtagttgatggagtag 35998837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 44526451 - 44526409
Alignment:
Q  163 agtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||| |||||| ||||||| |||||||||||||||||||||||    
T  44526451 agtaacatttattaaaacatccttattaattgtagttagtgga 44526409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 12567211 - 12567268
Alignment:
Q  143 ttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||| |||||||||||| ||||||||| |||||||  | |||| ||||||||||    
T  12567211 ttgattttaatggtaaaattaatatcatttaataaaacagtcatattgattgtagtta 12567268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 3098825 - 3098757
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgta 196  Q
    |||||||||||| | |||||||  ||| |||||||  ||||||||||||||| | | ||||||||||||    
T  3098825 aaatgattaattatattgatttcaatgataaaattgatatcatttactaaaatatctttattaattgta 3098757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 43902368 - 43902278
Alignment:
Q  121 attaaggaaatgattaattgtgttgattttgatggtaaaat---tagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||   || ||| ||||| ||||| |  |||||||||  ||||||||||||||    
T  43902368 attaaggcaatgattaattatgttgattttaatgataaaattaatattattatttattaaaatattcttattaatcatagttagtggagta 43902278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 16463857 - 16463715
Alignment:
Q  67 ttatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16463857 ttataatactccccccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 16463758  T
Q  167 tcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16463757 tcatttactaaaacacccttattaattgtagttagtggagtag 16463715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 39785750 - 39785611
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattag---tatca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  39785750 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtactatca 39785651  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  39785650 tttactaaaacactcttattaattgtagttaatggagtag 39785611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 36794451 - 36794310
Alignment:
Q  68 tatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 167  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36794451 tataatactctctccgtctctaaataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 36794352  T
Q  168 catttactaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||||||||| |||||||||| |||||||||||||||||    
T  36794351 cttttactaaaacgcccttattaactgtagttagtggagtag 36794310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 15359045 - 15359174
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  15359045 tccgtctttaaataatagtcgtttaaggttgatgcacggttattaagaagatgattaattgtgttgattttgatgataaaattaatatcatttactaaaa 15359144  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||||    
T  15359145 cacccttattaattgtagttagtggagtag 15359174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 25637642 - 25637507
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25637642 tactccatccgtctctaaataatagttgtttaaggtttatgcacgattat-aaggaaatgattaattgtgttgattttgatggtaaaattagtgtcattt 25637544  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| ||||||||||||||||  |||||||    
T  25637543 actaaaacacctttattaattgtagttataggagtag 25637507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 45235738 - 45235616
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||  |||||||||||| |||||||||||||    
T  45235738 cctccgtctctaaataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaa 45235639  T
Q  178 aacacccttattaattgtagtta 200  Q
    |||||||||||||||||||||||    
T  45235638 aacacccttattaattgtagtta 45235616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 36354394 - 36354530
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| |||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  36354394 tactccatccgtctctaaataatagtcatttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattattt 36354493  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | | |||||| ||||||||||||||||||||||||||    
T  36354494 attgaaacactcttattaattgtagttagtggagtag 36354530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 76 - 209
Target Start/End: Original strand, 14523326 - 14523459
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||  ||||||||||||  |||||||||||| |||||||||||    
T  14523326 tccctccgtctctaaaaaatagtcgtttaaagtttatgcaaggttattaaggaaatgattttttgtgttgatttcaatggtaaaattaatatcatttact 14523425  T
Q  176 aaaacacccttattaattgtagttagtggagtag 209  Q
    |||| | |||||||||||||||||||||||||||    
T  14523426 aaaatatccttattaattgtagttagtggagtag 14523459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 37322593 - 37322454
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaa-tgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    |||||| | ||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||  |||||||||||| |||||    
T  37322593 actacttcatccgtctctaaattatagtcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaattaatatca 37322494  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  37322493 tttattaaaatacccttattaattgtagttagtggagtag 37322454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 32783515 - 32783404
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  32783515 tctctaaataataatcatttaaggttgatgcacggttattaagaaaatgattaattgtgtttattttgatagtaaaattaatatcatttactaaaacacc 32783416  T
Q  184 cttattaattgt 195  Q
     |||||||||||    
T  32783415 tttattaattgt 32783404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 31448665 - 31448774
Alignment:
Q  94 atagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  31448665 atagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagagtcatttactaaaacacccttactaatt 31448764  T
Q  194 gtagttagtg 203  Q
    | ||||||||    
T  31448765 gcagttagtg 31448774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 16806023 - 16805909
Alignment:
Q  93 aatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaat 192  Q
    |||||| ||||||||||  |||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||    
T  16806023 aatagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaat 16805924  T
Q  193 tgtagttagtggagt 207  Q
    |||||||||||||||    
T  16805923 tgtagttagtggagt 16805909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 16845304 - 16845190
Alignment:
Q  93 aatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaat 192  Q
    |||||| ||||||||||  |||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||    
T  16845304 aatagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaat 16845205  T
Q  193 tgtagttagtggagt 207  Q
    |||||||||||||||    
T  16845204 tgtagttagtggagt 16845190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 209
Target Start/End: Complemental strand, 39691649 - 39691516
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||| |||||||||||| ||| ||||||||||||  |||||| |||||||| ||||||||||||||||||||||  ||| |||||||| |||||||||||    
T  39691649 tcccaccgtctctaaattataatcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatcatttact 39691550  T
Q  176 aaaacacccttattaattgtagttagtggagtag 209  Q
    |||| || ||||||||||| ||||||||||||||    
T  39691549 aaaatactcttattaattgcagttagtggagtag 39691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 34120395 - 34120520
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    |||||||||||||||||||  ||||||| ||| ||||| | |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  34120395 cctccgtctctaaataataaccgtttaaagtttatgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaactagtattatttactaa 34120494  T
Q  178 aacacccttattaattgtagttagtgga 205  Q
    || |   |||||||||||||||||||||    
T  34120495 aata--tttattaattgtagttagtgga 34120520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 5789599 - 5789729
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||||||||||  |||| ||||| |||||||||  |||||| ||||||||||||||||||||||| |||| ||  || |||||||||||  |||||    
T  5789599 tacttcctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattt 5789698  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||||||||||||||||||||||    
T  5789699 actaaaacacccttattaattgtagttagtg 5789729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 209
Target Start/End: Complemental strand, 35314043 - 35313913
Alignment:
Q  80 tccgtctctaaataatagtcgtttaagg-ttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    ||||||||  |||| |||||||||||   |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||  ||||| ||||    
T  35314043 tccgtctcacaatattagtcgtttaaatattgatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttattaaa 35313944  T
Q  179 acacccttattaattgtagttagtggagtag 209  Q
     || |||||||||||||||||||||||||||    
T  35313943 gcaaccttattaattgtagttagtggagtag 35313913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 34225725 - 34225617
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||||||  |||||| ||||||||||||||| ||||| | |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  34225725 gtttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagtattatttactaaaacacccttattaattgtagtt 34225626  T
Q  200 agtggagta 208  Q
    | |||||||    
T  34225625 aatggagta 34225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 43410588 - 43410452
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||| ||||||||||| |||||| ||||| |||  |||||| ||||||||||||| ||||||||||||||| |  ||| |||||||| ||||||||    
T  43410588 tacttcctacgtctctaaattatagtcctttaatgtttgtgcacgattattaaggaaattattaattgtgttgatatcaatgataaaattaatatcattt 43410489  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | |||||||||||||||||| ||||||||    
T  43410488 actaaaatatccttattaattgtagttaatggagtag 43410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 16377614 - 16377743
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||  |||| || ||||||||| ||  |||||| ||||||| ||||||||||||||||||||||   |||||||||||| |||||||||| ||||    
T  16377614 tccgtctcacaatattaatcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaattaatatcatttaccaaaa 16377713  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
     | |||||||||||||||||||||||||||    
T  16377714 taaccttattaattgtagttagtggagtag 16377743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 17695492 - 17695356
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| |||||||| |||| ||| ||||||||||||  |||||| ||||||||||||||||||||||| |||||||  |||||||||||  ||||||||    
T  17695492 tactccatccgtctcaaaattataatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattgatatcattt 17695393  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    || |||| |  |||||||||| |||||||| ||||||    
T  17695392 acaaaaatattcttattaattatagttagtagagtag 17695356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 8947049 - 8947139
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  8947049 ttattaaggaaatgattaattgtgttgatttcaatgataaaattagtaatatttactaaaacatccttattaattatagttagtggagtag 8947139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 19937823 - 19937733
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||| ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||    
T  19937823 aaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaa 19937733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 43115773 - 43115889
Alignment:
Q  93 aatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaat 192  Q
    ||||||||||||| |||  ||| || ||||||| |||||||||||||||||||||||  ||| |||| |||||| |||||||||||| || |||||| ||    
T  43115773 aatagtcgtttaaagtttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatgataaagttagtagcatttactaaaatactcttatttat 43115872  T
Q  193 tgtagttagtggagtag 209  Q
    |||||||||||||||||    
T  43115873 tgtagttagtggagtag 43115889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 11742484 - 11742615
Alignment:
Q  80 tccgtctctaaataata---gtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||||||||||||   ||||||||| ||| ||||||| |||||||| || |  |||||||| |||||||||||||| |||| | ||| ||||| ||    
T  11742484 tccgtctctaaataatattagtcgtttaacgtttatgcacgattattaagaaattttttaattgtattgattttgatggt-aaatcaatattatttatta 11742582  T
Q  177 aaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||| ||||||||    
T  11742583 aaacacccttattaattgtagttaatggagtag 11742615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 9458267 - 9458353
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||     | || |||||||||||||||||||||||||||||||||||    
T  9458267 gttattaagaaaataattaattgtgttgattttgatggtaaaattag-----tgtattaaaacacccttattaattgtagttagtggagtag 9458353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 26607919 - 26608008
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaatt 162  Q
    |||||||||| ||||||||| ||| | ||||||||||  |||||| |||||||| ||||||||||||||||||||||  |||||||||||    
T  26607919 tactccctccttctctaaattataatagtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 31976465 - 31976374
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||| | ||||||||||  || |||||||  || |||||||||||||||| |||| ||||| |||||||||||||||    
T  31976465 gttattaaggaaatgattagtagtgttgatttcaatagtaaaatatgtttcatttactaaaacactcttaataattatagttagtggagtag 31976374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 1206709 - 1206781
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||||||| |||||||||   |||||||||||||| |||||||||||| | ||||||||||||||||||    
T  1206709 aaatgattaattatgttgatttcagtggtaaaattagtaacatttactaaaatatccttattaattgtagtta 1206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 5272144 - 5272212
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgt 141  Q
    |||||||| | |||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||||    
T  5272144 tactcccttcatctctaaataatagtcgtttaaggtttacgcacgattattaaggaaataattaattgt 5272212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 3323254 - 3323337
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattta 173  Q
    |||| |||||||||||||||  |||||| ||||||   ||||||||||||||||||||||  ||||||||||||||| ||||||    
T  3323254 aatattagtcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagtaacattta 3323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 35242297 - 35242384
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| ||| ||||||||||||||||| ||| ||||||||| ||||||||||| || |   |||||||||||||||||| ||||||    
T  35242297 ttaaggagatgtttaattgtgttgattttaatgttaaaattagaatcatttactagaatatatttattaattgtagttagttgagtag 35242384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 38187903 - 38187969
Alignment:
Q  142 gttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||| ||| |||||||||||||| | |||||||||||||||| ||||||||||||||||| |||||    
T  38187903 gttgactttaatggtaaaattagtttaatttactaaaacacccctattaattgtagttagtcgagta 38187969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 43730720 - 43730641
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||  |||||||||||| |||||||||||| ||||||||||||||  | |||||||||||||||||| | ||||||    
T  43730720 aaatgattaggtgtgttgattttaatggtaaaattaatatcatttactaaa--aaccttattaattgtagttactagagtag 43730641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 26337112 - 26337208
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||| ||||||||||||||| ||  ||||||||| ||| |||||||  ||||||||| |||||||||  |||||||| |||||||||||||||    
T  26337112 tgcatggtttttaaggaaatgatta-ttaagttgattttaatgttaaaattgatatcatttattaaaacacctctattaattatagttagtggagtag 26337208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 27501489 - 27501586
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    ||||| |||||||||  |||| | |||||||||||||  || | | |||||||||||||||| |||| |||||||||  |||||||||||||||||||    
T  27501489 tactctctccgtctcacaatattcgtcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagtatcat 27501586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 32831205 - 32831262
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||    
T  32831205 atggtaaaattaatatcatttactaaaacatctttattaattgtagttattggagtag 32831262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 38763669 - 38763584
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||||||||||||||| ||| | ||||||||||| ||||||||||  || ||||||||||||| || | |||||||| |||||    
T  38763669 cacggttattaaggaaatggttagtagtgttgattttaatggtaaaatgtgtttcatttactaaaatactcatattaattatagtt 38763584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 11367241 - 11367121
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||| | ||||||||| ||| | |||||| |||  |||| | ||| |||| | ||||||||||||||||||||| || ||||||||| | ||||||    
T  11367241 tactcccttcatctctaaattataatagtttaaagttcgtgcaagattagtaagaagatgattaattgtgttgattttaattgtaaaattaatgtcattt 11367142  T
Q  173 actaaaacacccttattaatt 193  Q
    ||| ||| ||| |||||||||    
T  11367141 acttaaatacctttattaatt 11367121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 27866614 - 27866527
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||| || |||||||||||||||||  |||||||||| ||| |||||||| |||| |||| ||||| | ||||||||||||||||||    
T  27866614 tgcacgatttttaaggaaatgattaataatgttgattttaatgataaaattaatatc-tttagtaaaatatccttattaattgtagtta 27866527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 208
Target Start/End: Original strand, 18853158 - 18853287
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaa--aattagtatcatttactaa 177  Q
    ||||| || |||||||||||||||||  ||  |||||| |  |||||||||| |||||||||||||||||  ||| |||  |||| ||||||||||| ||    
T  18853158 tccgtatcaaaataatagtcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatgataattaatt-gtatcatttaccaa 18853256  T
Q  178 aacacccttattaattgtagttagtggagta 208  Q
    || || ||||||| ||||||||||| |||||    
T  18853257 aatactcttattagttgtagttagtagagta 18853287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 19426564 - 19426481
Alignment:
Q  127 gaaatgattaattgtgttgattttga-tggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||| | || ||||||||| | |||||||||||| | | |||||||||||||| ||| ||||||    
T  19426564 gaaatgattaattgtgttgattttcaatgataaaattagcaacatttactaaaatatcattattaattgtagtaagtcgagtag 19426481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 43699596 - 43699670
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    |||||||| |||||||||| |||||||||||  || ||||||||||||||||||| ||||| || | ||||||||    
T  43699596 ttattaagaaaatgattaactgtgttgatttcaatagtaaaattagtatcatttattaaaatacacctattaatt 43699670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 39329663 - 39329750
Alignment:
Q  123 taaggaaatgattaattgtgt--tgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| ||||||| ||||||||  ||||||  ||| |||||||| || ||||||||||||||| ||||||||||||||||| ||||||||    
T  39329663 taagaaaatgatcaattgtgtattgatttcaatgataaaattaatagcatttactaaaacactcttattaattgtagtta-tggagtag 39329750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 3601464 - 3601416
Alignment:
Q  155 gtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  3601464 gtaaaaatagttgcatttactaaaacacccttattaattgtagttagtg 3601416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 30544445 - 30544409
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggtt 109  Q
    |||||||||||||||||||||||||||||||||||||    
T  30544445 tactccctccgtctctaaataatagtcgtttaaggtt 30544409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 41220954 - 41221033
Alignment:
Q  130 atgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||  ||  |||||||||||||||||| ||||| |   |||||||||||||||| || |||||    
T  41220954 atgattaattgtgttgatttcaattataaaattagtatcatttattaaaatatttttattaattgtagttaatgaagtag 41221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 39443881 - 39443799
Alignment:
Q  67 ttatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 149  Q
    |||||||||||| ||| |||   |||| |||||||||||||||  |||||  |||||||| |||||||||||| |||||||||    
T  39443881 ttatactactccatccatcttataatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgattt 39443799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 43730537 - 43730487
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    |||||||||  |||||||||||| |||||||||||| ||||||||||||||    
T  43730537 aaatgattaggtgtgttgattttaatggtaaaattaatatcatttactaaa 43730487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 26608178 - 26608226
Alignment:
Q  157 aaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||| ||||||||||||||| || |||||||||| |||||||||||    
T  26608178 aaaattaatatcatttactaaaatactcttattaattatagttagtgga 26608226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 28170589 - 28170661
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||||||| |||||||||  | ||||||||||||  |||||||||  ||| | ||||||||||||||||    
T  28170589 aaatgattaattatgttgatttcaagggtaaaattagttgcatttactagtacagctttattaattgtagtta 28170661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 33406993 - 33407057
Alignment:
Q  141 tgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||| ||||||||||  || ||||||||  ||||||| ||||||||| |||||||||||    
T  33406993 tgttgattttaatggtaaaatatgtttcatttaccgaaacaccattattaattatagttagtgga 33407057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 34437993 - 34438081
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    ||||||||||||  |||||||||||  |||||||||| |||  |||||  |||||||||||||||| |  |||||||||| ||| ||||    
T  34437993 cacggttattaaaaaaatgattaataatgttgattttaatgacaaaatatgtatcatttactaaaatattcttattaattatagatagt 34438081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 42363736 - 42363808
Alignment:
Q  121 attaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    |||||||||||||||| | || |||||||| || |||||||  || | |||||||| ||||||||||||||||    
T  42363736 attaaggaaatgattagtagtattgattttaatcgtaaaatgtgtttaatttactataacacccttattaatt 42363808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 5050606 - 5050689
Alignment:
Q  120 tattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||| ||||||||||||  |||| ||||| || ||||||   |||| ||||| ||||||||||||||||||| || ||||||    
T  5050606 tattaatgaaatgattaatgatgttaatttttatagtaaaacatgtataatttagtaaaacacccttattaattataattagtg 5050689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 4411001 - 4411067
Alignment:
Q  129 aatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgt 195  Q
    ||||||||||  |||||||||| |||| ||||| | |||||||| ||||||| | ||||||||||||    
T  4411001 aatgattaataatgttgattttaatggcaaaatgaatatcatttgctaaaacgcacttattaattgt 4411067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 17346395 - 17346449
Alignment:
Q  155 gtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| ||||||||| ||||| |   |||||||||||||||||||||||||    
T  17346395 gtaaaattaatatcatttattaaaatatttttattaattgtagttagtggagtag 17346449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 2053337 - 2053284
Alignment:
Q  156 taaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||| ||||||| || | |||||||| |||| ||||||||||    
T  2053337 taaaattagtatcattcactaaaatacgcatattaattatagtcagtggagtag 2053284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 26863405 - 26863445
Alignment:
Q  169 atttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||||||||  |||||||||||||||||||||||||    
T  26863405 atttattaaaacacttttattaattgtagttagtggagtag 26863445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 11655895 - 11656034
Alignment:
Q  70 tactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  11655895 tactactccctccgtctctaaataagagtcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagtgtca 11655994  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11655995 tttactaaaacacccttattaattgtagttagtggagtag 11656034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 32440597 - 32440733
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32440597 tactccctccgtctctaaataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtattattt 32440696  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  32440697 actaaaacacccttattaattgtaattagtagagtag 32440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 6802094 - 6801957
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  6802094 ctactccctccatctctaaataatagtcgtttaagattgatgcatggttattaagaaaatgattaattatgttgattttgatggtaaaattaatatcatt 6801995  T
Q  172 tactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  6801994 tactaaaacgcccttattaattgtagttagtggagtag 6801957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 30717062 - 30716926
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||| || |||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  30717062 tactcccttcgactctaaataatagtcgtttaagattgatgcacagttattaaggaaatgattaattttattgactttgatggtaaaattagtatcattt 30716963  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||| |||||||||||||||||||||||||||||||||    
T  30716962 acttaaacacccttattaattgtagttagtggagtag 30716926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 29363468 - 29363340
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  29363468 tactccctccgtctttaaataatagtcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagtatcattt 29363369  T
Q  173 actaaaacacccttattaattgtagttag 201  Q
    ||||||||| |||||||||||||||||||    
T  29363368 actaaaacatccttattaattgtagttag 29363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 21010339 - 21010212
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||||||| ||||||||||||| |||||||||| ||||||  |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  21010339 tacttcctccgtttctaaataatagttgtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagtatcattt 21010240  T
Q  173 actaaaacacccttattaattgtagtta 200  Q
    |||||||||||||||| |||||||||||    
T  21010239 actaaaacacccttataaattgtagtta 21010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 3291720 - 3291856
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| || |||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| | |||||| ||||||| |||||||| ||||    
T  3291720 tactccatcggtctctaaataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtattattt 3291819  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| ||| ||||||||||||||||||| |||||    
T  3291820 actaaaatacctttattaattgtagttagtgaagtag 3291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 13087692 - 13087557
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||| |||||||||||||| ||  ||| |||||||| || |||||||||||||||||||  |||||||||||| ||||||||    
T  13087692 tactccctccgtctctaaataaaagtcgtttaaggttcataaacgattattaagaaagtgattaattgtgttgatttcaatggtaaaattaatatcattt 13087593  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||||| ||||||||||| ||||||||| ||||    
T  13087592 actaaaacatccttattaattatagttagtgaagta 13087557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 27448113 - 27448231
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    ||||||||||||||||||| ||||||||||||  |||||  |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  27448113 cctccgtctctaaataataatcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaa 27448212  T
Q  178 aacacccttattaattgta 196  Q
    |||| | ||||||||||||    
T  27448213 aacatcattattaattgta 27448231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 5302484 - 5302377
Alignment:
Q  102 ttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttag 201  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||     
T  5302484 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatataatttaccaaaacatccttattaattgtagttaa 5302385  T
Q  202 tggagtag 209  Q
    ||||||||    
T  5302384 tggagtag 5302377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 6834321 - 6834450
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||| |||||||||||||  ||||| ||| ||||||| |||||||| |||| ||||||||||||||||||||| || |||||| ||||||||    
T  6834321 tactccctccgtttctaaataatagttctttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcattt 6834420  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    ||||||||||| ||||||||| ||||||||    
T  6834421 actaaaacacctttattaattatagttagt 6834450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 23142829 - 23142693
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| ||||  ||||||||| || |||| |||||||| ||||||||||||||||||||||  ||||||||| ||||  |||||    
T  23142829 tactccctccgtctcacaatattagttatttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcattt 23142730  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23142729 actaaaacacccttattaattgtaggtagtggagtag 23142693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 1781939 - 1781830
Alignment:
Q  98 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 197  Q
    |||||||||||| ||||||| || ||||| |||||||||||| ||||||| |  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  1781939 tcgtttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacacccttattaattgtag 1781840  T
Q  198 ttagtggagt 207  Q
    ||||||||||    
T  1781839 ttagtggagt 1781830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 210
Target Start/End: Original strand, 1955940 - 1956068
Alignment:
Q  82 cgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca 181  Q
    |||||| ||||||||||||||||||||| || ||| || |||||| ||| |||||||||| |||||||  |||||||||||||||||||||||||| | |    
T  1955940 cgtctcaaaataatagtcgtttaaggtttatacacagtaattaagaaaaagattaattgtattgatttcaatggtaaaattagtatcatttactaatata 1956039  T
Q  182 cccttattaattgtagttagtggagtagc 210  Q
    | |||||||||||||||||||| ||||||    
T  1956040 ctcttattaattgtagttagtgaagtagc 1956068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 13909547 - 13909451
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||||| ||||||||||||||||||| |||||||||||  ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  13909547 tgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagtgacatttactaaaatacccttattaattgtagttagtggagta 13909451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 15058279 - 15058144
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||| |||||  |||| |||||||||||||||  |||||| |||||||| ||||||||||||  ||| ||||  ||||||||||||||  |||||    
T  15058279 tactccctctgtctcgcaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcattt 15058180  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||| ||||||||||||||||||||||| ||||    
T  15058179 actaaaatacccttattaattgtagttagtgaagta 15058144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 24983450 - 24983537
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||| ||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24983450 ttaaggaaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagttagtggagtag 24983537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 31894162 - 31894298
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| || ||||||||| ||  || | | |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||    
T  31894162 tactccctccgtctcacaatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 31894261  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||  | ||||||||||||||||||| |||||    
T  31894262 actaaaacgtcattattaattgtagttagtgaagtag 31894298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 3720201 - 3720325
Alignment:
Q  81 ccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    |||||||  |||| |||||||||||||||  |||||| ||||||| |||||||||||||||||||||||  ||  ||||||| |||  |||||| |||||    
T  3720201 ccgtctcacaatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatttgtagtatttacaaaaac 3720300  T
Q  181 acccttattaattgtagttagtgga 205  Q
    || ||||||||||||||||||||||    
T  3720301 actcttattaattgtagttagtgga 3720325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 11143597 - 11143675
Alignment:
Q  132 gattaattg-tgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  11143597 gattaattgatgttgattttgatgataaaattagtatcatttactaaatcacccttattaattatagttagtgaagtag 11143675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 209
Target Start/End: Original strand, 1063571 - 1063691
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    ||||| ||||||||||| ||| ||| |   || ||||| ||||||||||||||||||||||  ||| |||||||||||| ||||||||||| || || |     
T  1063571 aaatagtagtcgtttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactctgag 1063670  T
Q  189 taattgtagttagtggagtag 209  Q
    |||||||||||||||||||||    
T  1063671 taattgtagttagtggagtag 1063691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 17829101 - 17828967
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| ||||||||| ||||||||||| |||||||||  || |  ||| |||||||||| |||||| ||||| ||||  |  ||||||||| ||||||||    
T  17829101 tactctctccgtctcaaaataatagtcttttaaggtttgtgtatagtt-ttaaggaaattattaatagtgttaatttcaacagtaaaattaatatcattt 17829003  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||| | | ||||||||||||||||||| ||||    
T  17829002 actaaaatatctttattaattgtagttagtgaagta 17828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 7920390 - 7920266
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||| ||||||||  |||||||| ||  |||||| || |||| ||||||||||||| |||||||||  ||||||||||||  | |||||||||||| |     
T  7920390 gtctcaaaataatatccgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaattaaaaccatttactaaaata- 7920292  T
Q  183 ccttattaattgtagttagtggagta 208  Q
     |||||||||||||||||||| ||||    
T  7920291 tcttattaattgtagttagtgaagta 7920266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 181700 - 181582
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| ||||||| |||||||   ||||| |||||||  |||| ||||||||| |||||||  || ||||||||||||  ||||||||||||| | |||||    
T  181700 aatattagtcgtctaaggtttgagcacgattattaaaaaaat-attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatcattatt 181602  T
Q  190 aattgtagttagtggagtag 209  Q
    |||| |||||||||||||||    
T  181601 aattatagttagtggagtag 181582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 27367427 - 27367502
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccctta 187  Q
    |||||| ||||||| ||||||||||||||||||||||||  | ||||||||| |  ||||||||||||||||||||    
T  27367427 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaacaccctta 27367502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 27457774 - 27457849
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccctta 187  Q
    |||||| ||||||| ||||||||||||||||||||||||  | ||||||||| |  ||||||||||||||||||||    
T  27457774 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaacaccctta 27457849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 1225160 - 1225079
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||| |||||||||||||||||||||||  || ||||||||| ||| ||||||||||| |  |||||||||| |||||||||    
T  1225160 ttaaagaaatgattaattgtgttgatttaaatagtaaaattaatattatttactaaaatattcttattaattttagttagtg 1225079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 26592438 - 26592354
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    ||||||||||||||||||||  | |||||||| ||||||||||  |||||||||||||| | |||||| || ||| |||||||||    
T  26592438 ttattaaggaaatgattaataatattgattttaatggtaaaatgtgtatcatttactaatatacccttgtttattatagttagtg 26592354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 21804530 - 21804612
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||| ||||||||||||||| || ||||  || ||||||||||||||||||||| ||| |  ||||||||||||||||||||||    
T  21804530 ttaaagaaatgattaattgtattaatttcaattgtaaaattagtatcatttacttaaata-tcttattaattgtagttagtgga 21804612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 12605457 - 12605551
Alignment:
Q  115 acggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||  |||||||||||    |||||||| |||| ||||||  ||||||||| ||||||||| ||||||||| |||||||| ||||||    
T  12605457 acggttattaacaaaatgattaataagattgattttaatggcaaaatttatatcatttattaaaacacctttattaattttagttagtagagtag 12605551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 7072273 - 7072220
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    ||||| |||| |||||||||||||||||| |||||||||||||| |||||||||    
T  7072273 ttaagaaaataattaattgtgttgattttaatggtaaaattagtgtcatttact 7072220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 8115073 - 8115122
Alignment:
Q  156 taaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||    
T  8115073 taaaattagtatcatttactaaaatactcttattaattttagttagtgga 8115122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 2423734 - 2423662
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaa 191  Q
    ||||| || |||||||||||  |||||||||| ||||||||||  |||||||||| |||||||| ||||||||    
T  2423734 ttattcagaaaatgattaatattgttgattttaatggtaaaatatgtatcatttattaaaacactcttattaa 2423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 23397628 - 23397708
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||| |||| ||| ||||||||  |||||||||||||| | ||||||||||||||   |||||| ||||||||||||||||    
T  23397628 aaattattacttgagttgatttaaatggtaaaattagtgtaatttactaaaacacatctattaagtgtagttagtggagta 23397708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 34300113 - 34300021
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||| || ||||||  |||| |||||||  ||| |||||||||||| ||||||||||| | ||||||||||||| ||||||| |||||    
T  34300113 ggtttttaaagagatgatttgttgttttgatttgaatgataaaattagtattatttactaaaatatccttattaattgtggttagtgaagtag 34300021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 15582389 - 15582339
Alignment:
Q  129 aatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| |||||    
T  15582389 aatgattaattgtgttgatttcaatggtaaaatcagtatcatttattaaaa 15582339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 21018875 - 21018789
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||||| |  | |||||||| ||| ||||||  |||| ||||||||||||||| |||||| || |||||| ||||    
T  21018875 ttattaaggaaatgattactactattgattttaatgataaaatatgtattatttactaaaacaccattattagttatagttaatgga 21018789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 1671792 - 1671715
Alignment:
Q  130 atgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    ||||||| ||| ||||||||| ||| |||||| | | ||| ||| |||||||| | ||||||||||||||||||||||    
T  1671792 atgattagttgcgttgattttaatgataaaatgaatttcaattattaaaacacacctattaattgtagttagtggagt 1671715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 4581999 - 4582039
Alignment:
Q  139 tgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  4581999 tgtgttgattttaatggtaaaattaatatcatttactaaaa 4582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 8695124 - 8695077
Alignment:
Q  156 taaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||||| || ||||||||||||||  ||||||||||||||||||||    
T  8695124 taaaattaatagcatttactaaaacattcttattaattgtagttagtg 8695077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 12340080 - 12339986
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||||| ||||||||| | ||||||||||| ||| ||||  | || | ||||||||||||||  ||||||||| ||||||| |||||||    
T  12340080 cacgattattaagaaaatgattagtagtgttgattttaatgataaatat-gtttaatttactaaaacacttttattaattatagttagcggagtag 12339986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 16431123 - 16431056
Alignment:
Q  132 gattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||| ||||||| ||| | ||||||||| || ||||||||||||| || ||||||| ||||||||    
T  16431123 gattaatagtgttgagtttaaaggtaaaatttgtgtcatttactaaaatactcttattacttgtagtt 16431056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 17835491 - 17835420
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    |||| ||||||||| |||||||| ||  |||||||| | ||||||||||||| ||  |||||||||||||||    
T  17835491 aaataattaattgtattgattttaataataaaattaatctcatttactaaaatacatttattaattgtagtt 17835420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 7764240 - 7764317
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||| ||||| ||||| |||  |||||||| ||||||    
T  7764240 ttaatgaaattattaattatgttgattttaatggtaaaattaatat-atttattaaaatacctctattaattatagtta 7764317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 31223332 - 31223385
Alignment:
Q  146 attttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||| ||||||||||  || ||||||||||||||||| ||||||||| |||||    
T  31223332 attttaatggtaaaatgtgtttcatttactaaaacacctttattaattatagtt 31223385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 6245953 - 6246001
Alignment:
Q  160 attagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||||||||||||||||||| | | ||||||||| ||||| ||||||||    
T  6245953 attagtatcatttactaaaatatcattattaattatagtttgtggagta 6246001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 28101379 - 28101447
Alignment:
Q  141 tgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||  ||| ||||||||||||||||||||||||  |  ||  ||||||||||||||| |||||    
T  28101379 tgttgatttcaatgataaaattagtatcatttactaaaattcatttgataattgtagttagtgtagtag 28101447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 34639405 - 34639497
Alignment:
Q  74 actccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    ||||| ||||||||  |||| || |||||| |||||  | |||| ||| ||||||||| |||||||||||| ||||  ||||| |||||||||    
T  34639405 actccatccgtctcacaatattaatcgtttgaggtttgtacacgattaataaggaaataattaattgtgttaatttcaatggtgaaattagta 34639497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 34657610 - 34657650
Alignment:
Q  169 atttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||||||||  |||||||||||||||||||||||||    
T  34657610 atttattaaaacacttttattaattgtagttagtggagtag 34657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 80 - 206
Target Start/End: Complemental strand, 42935823 - 42935697
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42935823 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaa 42935724  T
Q  180 cacccttattaattgtagttagtggag 206  Q
    |||||||||||||||||||||||||||    
T  42935723 cacccttattaattgtagttagtggag 42935697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 83554 - 83418
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  83554 tactccctccgtctctaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 83455  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||  |||||||||||||||||| |||||||    
T  83454 actaaaacattcttattaattgtagttagcggagtag 83418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 16560530 - 16560666
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16560530 tactccctccgtctctaaataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcattt 16560629  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  16560630 actaaaacatccttattaattgtagttagtggggtag 16560666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 16605132 - 16604996
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16605132 tactccctccgtctctaaataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcattt 16605033  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  16605032 actaaaacatccttattaattgtagttagtggggtag 16604996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 28202269 - 28202405
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||||    
T  28202269 tactccatccgtctctaaataatagttgtttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaattaatgtcattt 28202368  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28202369 actaaaacatccttattaattgtagttagtggagtag 28202405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 34947669 - 34947533
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||||||||||||||||||  |||| | ||||||| |||||||||||||||||||||||  |||||||||||| ||||||||    
T  34947669 tactccctccgtctctaaataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaattattatcattt 34947570  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||    
T  34947569 actaaaacacccttattaattgtagttagtggagtag 34947533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 9786157 - 9786021
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| |||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  9786157 tactccatccgtctctaaataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatttcattt 9786058  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||| |||||||||||||||||||| |||||    
T  9786057 actaaaacacgcttattaattgtagttagtgaagtag 9786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 759061 - 759187
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  759061 gtctctaaataatagtcatttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacat 759160  T
Q  183 ccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||| |||||||    
T  759161 ccttattaattgtagttagcggagtag 759187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 43874070 - 43873956
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  43874070 tagtcgtttaaggttgatgcatggttattaaagaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaaatg 43873971  T
Q  195 tagttagtggagtag 209  Q
    |||||||||||||||    
T  43873970 tagttagtggagtag 43873956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 21390466 - 21390328
Alignment:
Q  73 tactccctccgtctctaaataata--gtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    |||||| |||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||||    
T  21390466 tactccatccgtctctaaataatacagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaactaatatcat 21390367  T
Q  171 ttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  21390366 ttactaaaacatccttattgattgtagttagtggagtag 21390328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 11373388 - 11373524
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||| ||  |||| ||||||||||||| |  |||||| |||||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  11373388 tactccctccgtttcacaatattagtcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcattt 11373487  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||    
T  11373488 actaaaacacccttattaattgtagttagtggagtag 11373524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 84 - 203
Target Start/End: Complemental strand, 27921146 - 27921027
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||     
T  27921146 tctctaaataatagttgtttaaggttgatgcacagttattaagaaaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacact 27921047  T
Q  184 cttattaattgtagttagtg 203  Q
    ||||||||||||||||||||    
T  27921046 cttattaattgtagttagtg 27921027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 13962130 - 13961992
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||     
T  13962130 actactccctccgcctctaaataatagtcatttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaattaatatcac 13962031  T
Q  171 ttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||| ||||| | ||||||||| |||||||||||||||||    
T  13962030 ttaataaaatatccttattaagtgtagttagtggagtag 13961992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 46211600 - 46211472
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattag---tatca 169  Q
    |||||||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||   |||||    
T  46211600 tactccctccgtctttaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtactatca 46211501  T
Q  170 tttactaaaacacccttattaattgtagt 198  Q
    |||||||||||| ||||||||||||||||    
T  46211500 tttactaaaacatccttattaattgtagt 46211472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 201
Target Start/End: Complemental strand, 40076473 - 40076356
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  40076473 tctctaaataatagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagtatcatttactaaaacact 40076374  T
Q  184 cttattaattgtagttag 201  Q
     |||||||||||| ||||    
T  40076373 attattaattgtacttag 40076356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 41506043 - 41506161
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||    
T  41506043 aataatagtcgtt-aaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagtagcatttactaaaacactcttatt 41506141  T
Q  190 aattgtagttagtggagtag 209  Q
    ||||||||||||||||||||    
T  41506142 aattgtagttagtggagtag 41506161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 44424297 - 44424178
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||      |    
T  44424297 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaat---tatcattt------a 44424207  T
Q  180 cacccttattaattgtagttagtggagta 208  Q
    |||||||||||| ||||||||||||||||    
T  44424206 cacccttattaaatgtagttagtggagta 44424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 26974198 - 26974059
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagt---atca 169  Q
    |||||| ||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||  |||||||||||| |   ||||    
T  26974198 tactccttccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatca 26974099  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  26974098 tttactaaaatactcttattaattgtagttagtggagtag 26974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 7463382 - 7463246
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  7463382 tactccctccgtctcgtaatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagtagcattt 7463283  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||| ||| ||||| |||||||||||||||||||||||    
T  7463282 acttaaataccctcattaattgtagttagtggagtag 7463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 38391892 - 38391785
Alignment:
Q  98 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 197  Q
    |||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  38391892 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacactcttgttaattgtag 38391793  T
Q  198 ttagtgga 205  Q
    ||||||||    
T  38391792 ttagtgga 38391785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 21759966 - 21760080
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    |||||||||||||||  |||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21759966 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacacccttactaattg 21760065  T
Q  195 tagttagtggagtag 209  Q
    |||||| ||||||||    
T  21760066 tagttaatggagtag 21760080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 3178186 - 3178300
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    |||| ||||||||||  |||| | |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3178186 tagttgtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaattaatatcatttactaaaacacctttattaattg 3178285  T
Q  195 tagttagtggagtag 209  Q
    |||||||||||||||    
T  3178286 tagttagtggagtag 3178300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 28103902 - 28103772
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| | |||||||||||||  |||||| |||||||| ||||||||||||||||||||||  ||||||||||||| | |||||    
T  28103902 tactccctccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcattt 28103803  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    || ||||||||||||||||||||||||||||    
T  28103802 accaaaacacccttattaattgtagttagtg 28103772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 44180382 - 44180268
Alignment:
Q  65 aattatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattag 164  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||||||||  |||||||||||||    
T  44180382 aattttactactctctccgtctctaaataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattag 44180283  T
Q  165 tatcatttactaaaa 179  Q
    ||| |||||||||||    
T  44180282 tataatttactaaaa 44180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 24516249 - 24516385
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||| |||||  |||  ||||||||||||||| || |||| |||||||  ||||||||||||||||||||||  ||||||||||||||| |||||    
T  24516249 tactccctctgtctcataattttagtcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagtaacattt 24516348  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | |||||||||||||||||||||||||||    
T  24516349 actaaaaaaaccttattaattgtagttagtggagtag 24516385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 22738863 - 22738741
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||  |||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  22738863 tccgtctcacaatattagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtatcatttactaaaa 22738764  T
Q  180 cacccttattaattgtagttagt 202  Q
     | ||| ||||||||||||||||    
T  22738763 tatcctcattaattgtagttagt 22738741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 2459622 - 2459504
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    ||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||||||||  | |||||||||||  |||||||||| |||||||||||    
T  2459622 aaatattagtcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattag--tcatttactacaacacccttat 2459525  T
Q  189 taattgtagttagtggagtag 209  Q
    |||||||||||||||||||||    
T  2459524 taattgtagttagtggagtag 2459504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 8592407 - 8592536
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||  |||| ||| |||||||||||  |||| | ||||||| |||||||||||||||||||||||  ||||| |||||||||  ||||| |||||    
T  8592407 tccgtctcacaatattagccgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagtagtatttaataaaa 8592506  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||||    
T  8592507 cacccttattaattgtagttagtggagtag 8592536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 23670655 - 23670519
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||||||||||||||  |||| || ||||||||||||  |||||  ||||||||| ||| |||||||||||||||||  |||||||||||| || ||||    
T  23670655 ctactccctccgtctcacaatattaatcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaattaatagcatt 23670557  T
Q  172 tactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  23670556 tactaaaacactcttattaatggtagttagtggagtag 23670519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 209
Target Start/End: Original strand, 29835377 - 29835510
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    ||||||||||||  |||| || ||||||||||||  ||| || ||||||||||||||||||||| |||||||||  ||||||||||||||| ||||||||    
T  29835377 tccctccgtctcgcaatattaatcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagtagcatttact 29835476  T
Q  176 aaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| ||||||||||| |||||  |||||||    
T  29835477 aaaacactcttattaattgcagttaacggagtag 29835510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 31930455 - 31930592
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    |||||| ||||| ||||||||| |||||||||||| ||| ||||||| ||||||| ||||||||| | |||||||||||| ||||||||| || | | ||    
T  31930455 actacttcctccttctctaaattatagtcgtttaaagtttatgcacgattattaaagaaatgattgactgtgttgattttaatggtaaaactaatctaat 31930554  T
Q  171 ttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||  ||||| ||||||||||||||||||||||||||||    
T  31930555 tttttaaaatacccttattaattgtagttagtggagta 31930592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 2850841 - 2850971
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||||| ||||||||||| ||||  |||| | ||||||||||||||||||||| |||||||||  ||| |||||||| ||| ||||    
T  2850841 tactccatccgtctctaaattatagtcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattattt 2850940  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    ||||||| ||||| ||||||| |||||||||    
T  2850941 actaaaataccctcattaattatagttagtg 2850971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 21350605 - 21350721
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||||||  |||||| |||||||||||||   |||||||||||||||  ||||||||| ||||   |||||||||||||||||||||    
T  21350605 aatattagtcgtttaaggtttgtgcacgattattaaggaaat---taattgtgttgatttcaatggtaaaaatagttgtatttactaaaacacccttatt 21350701  T
Q  190 aattgtagttagtggagtag 209  Q
    ||||||||||||||||||||    
T  21350702 aattgtagttagtggagtag 21350721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 33819356 - 33819247
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||||||| ||| ||| |||||||||||| |||    
T  33819356 gtttaaggttaatgtacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacaaaatcactcttattaattgttgtt 33819257  T
Q  200 agtggagtag 209  Q
     |||||||||    
T  33819256 tgtggagtag 33819247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 48609011 - 48608905
Alignment:
Q  93 aatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaat 192  Q
    ||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||| ||||||||||    
T  48609011 aatagtcgtttgaggtttatgcatgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----ttactaaaacatccttattaat 48608916  T
Q  193 tgtagttagtg 203  Q
     ||||||||||    
T  48608915 cgtagttagtg 48608905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 5524549 - 5524413
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||| ||||  |||| | ||||||||| |||  |||||| |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||    
T  5524549 tactccctccatctcacaatatttgtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacattt 5524450  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||||||  ||||||||| |||||||| ||||||    
T  5524449 aataaaacacttttattaattatagttagttgagtag 5524413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 46478259 - 46478389
Alignment:
Q  79 ctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    |||||||||  |||| ||||||||||| ||| || |||| |||||||  ||||||||||||||||| ||||| || ||||| |||||| |||||||||||    
T  46478259 ctccgtctcataatattagtcgtttaaagttcatacacgattattaattaaatgattaattgtgttaattttaatagtaaagttagtagcatttactaaa 46478358  T
Q  179 acacccttattaattgtagttagtggagtag 209  Q
    | |||||||||||||||||||| | ||||||    
T  46478359 atacccttattaattgtagttaattgagtag 46478389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 36790915 - 36790852
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgatta 136  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36790915 tactccctccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgatta 36790852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 30866110 - 30866000
Alignment:
Q  99 cgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 198  Q
    |||||||||||  |||||| ||||||| |||||||||||||||||| ||||  |||||| ||||| ||||||||||||||| || |||||||||| || |    
T  30866110 cgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggtataattaatatcatttactaaaatactcttattaattataat 30866011  T
Q  199 tagtggagtag 209  Q
    |||||||||||    
T  30866010 tagtggagtag 30866000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 32346034 - 32346148
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    |||| ||||||||||  || ||||||||||||||||| ||| |||||||||||||  |||||||||||| |||||| |||||||| || ||||||||||     
T  32346034 tagttgtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaattaatatcatctactaaaatactcttattaatta 32346133  T
Q  195 tagttagtggagtag 209  Q
    || ||||||||||||    
T  32346134 taattagtggagtag 32346148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 17828309 - 17828446
Alignment:
Q  73 tactccctccgtctctaaataatagt---cgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    |||||||||||||||||||| |||||   ||||||| |||  |||||| | |||||||||| ||||| || |||||||||  |||||||||||| |||||    
T  17828309 tactccctccgtctctaaattatagtagtcgtttaaagtttgtgcacgat-attaaggaaacgattatttttgttgatttcaatggtaaaattaatatca 17828407  T
Q  170 tttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||| |||  || ||||| |||||||||||||||||||    
T  17828408 tttacaaaattactcttatcaattgtagttagtggagta 17828446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 34100507 - 34100643
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||  |||| |||| ||||||| ||  |  ||| |||||||| ||||||||||||||||||||||  || |||||||||||| |||||    
T  34100507 tactccatccgtctcacaatattagttgtttaagatttgtcaacgattattaagaaaatgattaattgtgttgatttcaatagtaaaattagtagcattt 34100606  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | | |||||||||||||||| || |||||    
T  34100607 actaaaatatctttattaattgtagttactgaagtag 34100643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 6494963 - 6495030
Alignment:
Q  142 gttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||    
T  6494963 gttgattttgatggtaaaattagtgttatttactaaaacacttttattaattgtagttagtggagtag 6495030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 201
Target Start/End: Original strand, 7457386 - 7457509
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    ||||||||||  |||| ||||  ||||| |||  |||||| |||||||  |||||||||||| |||||||||  ||||||||||||||  ||||||||||    
T  7457386 cctccgtctcacaatattagttatttaatgtttgtgcacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagttacatttactaa 7457485  T
Q  178 aacacccttattaattgtagttag 201  Q
    || ||||||||||| |||||||||    
T  7457486 aagacccttattaaatgtagttag 7457509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 12631452 - 12631345
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    ||||| |||||||||  |||||| ||||||||||||| ||||||||| |||||||  || ||||||||||||  |||||  |||||| ||||||||||||    
T  12631452 tagtcatttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagtagtatttatcaaaacatccttattaattg 12631353  T
Q  195 tagttagt 202  Q
    ||||||||    
T  12631352 tagttagt 12631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 32018924 - 32019011
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttga-tggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||| |||||||||||||||||||||||||| | ||||||||  ||||||||||||||| || |||||||||||| ||||||||||||    
T  32018924 ttaatgaaatgattaattgtgttgattttgaatagtaaaatttctatcatttactaaaatactcttattaattgttgttagtggagta 32019011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 16904538 - 16904418
Alignment:
Q  83 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||| |||||||||||||||||||||  ||||   || ||||| ||||||||||||||||||||||  || ||||||||| ||||| || |||||| ||    
T  16904538 gtctcaaaataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaattattatcactttctaaaatac 16904439  T
Q  183 ccttattaattgtagttagtg 203  Q
     | |||||||| |||||||||    
T  16904438 tcgtattaattatagttagtg 16904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 21937796 - 21937883
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||| ||   || ||||| ||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  21937796 ttaaggaaatgattagttaactttattttaatgataaaattagtgtcatttactaaagcactcttattaattgtagttagtggagtag 21937883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 29121631 - 29121536
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||| |||||||||||| |||  |||||||||| ||||||||||  || | ||||||||||||||||| ||||||| | |||||||||||||    
T  29121631 cacggttactaaggaaatgatcaatattgttgattttaatggtaaaatatgtctaatttactaaaacaccctcattaattattgttagtggagtag 29121536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 39452512 - 39452390
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||||| ||||||||||||||||||||||||||    |||  |  ||||  |||| ||||||  |||||||||| |||||||||||| ||||||||    
T  39452512 tacttcctccatctctaaataatagtcgtttaaggtttggacacaatctttaaaaaaataattaata-tgttgattttaatggtaaaattaatatcattt 39452414  T
Q  173 actaaaacacccttattaattgta 196  Q
    ||||||| ||||||||||||||||    
T  39452413 actaaaatacccttattaattgta 39452390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 19271715 - 19271829
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    ||||||||||| | |  |||||| |||||||  ||||||||||||||||||||||  ||| | ||||||||  |||| ||||||| ||  ||||||||||    
T  19271715 tagtcgtttaatgcttgtgcacgattattaaaaaaatgattaattgtgttgatttcaatgatcaaattagtggcattgactaaaatacttttattaattg 19271814  T
Q  195 tagttagtggagtag 209  Q
    |||||||||||||||    
T  19271815 tagttagtggagtag 19271829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 7930181 - 7930092
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    ||||||||||||| ||||||||| | ||||||||||  |||| |||||  |  ||||||||||||||||||||||||||| |||||||||    
T  7930181 cacggttattaagaaaatgattagtagtgttgatttcaatggaaaaatatggttcatttactaaaacacccttattaattatagttagtg 7930092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 42796094 - 42796041
Alignment:
Q  156 taaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  42796094 taaaattagtaacatttattaaaacacccttattaattgtagttagtggagtag 42796041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 47045467 - 47045538
Alignment:
Q  126 ggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 198  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  47045467 ggaaatgattaattgagttgatttcaatg-taaaattagtatcatttcctaaaatacccttattaattgtagt 47045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 32018688 - 32018807
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    ||||||||||| |||||  ||  || ||| || |||| ||||||| |||||||||||||||  || ||||||||  ||||||||||||||| || |||||    
T  32018688 aaataatagtcatttaaaatttttgtacgatttttaatgaaatgaataattgtgttgatttcaatagtaaaatttctatcatttactaaaatactcttat 32018787  T
Q  189 taattgtagttagtggagta 208  Q
    ||||||| |||||| |||||    
T  32018788 taattgtcgttagtagagta 32018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 14063438 - 14063349
Alignment:
Q  120 tattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||| |  |||||||||| ||||||||||  || | |||||||||| |||||| |||| || |||||||||||||||    
T  14063438 tattaaggaaatgattagtaatgttgattttaatggtaaaatatgtttaatttactaaaccaccctcattagttatagttagtggagtag 14063349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 14373466 - 14373377
Alignment:
Q  120 tattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||| |  |||||||||| ||||||||||  || | |||||||||| |||||| |||| || |||||||||||||||    
T  14373466 tattaaggaaatgattagtaatgttgattttaatggtaaaatatgtttaatttactaaaccaccctcattagttatagttagtggagtag 14373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 27556975 - 27557048
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaat 192  Q
    |||||||||||||||||| |  |||||||||| |||| |||||  ||||||||||||||||||| |||||||||    
T  27556975 ttattaaggaaatgattactgatgttgattttaatggcaaaatgtgtatcatttactaaaacactcttattaat 27557048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 37245808 - 37245725
Alignment:
Q  123 taaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||| ||| |||||||| |||||||||  |||||||| |||||| ||||||||||||||| ||||||||||||| | ||||||||    
T  37245808 taagaaaaagattaattctgttgatttcaatggtaaa-ttagtagcatttactaaaacactcttattaattgtaataagtggagt 37245725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 49101786 - 49101696
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttac---taaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||||||||||||||||| ||||| | | |||||||| ||||||||||   ||||| || | ||||||||||||||||||||||||    
T  49101786 ttaagaaaatgattaattgtgtttattttaaggataaaattaatatcatttactattaaaatactcatattaattgtagttagtggagtag 49101696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 39005536 - 39005461
Alignment:
Q  127 gaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    ||||| |||| ||| |||||||   |||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  39005536 gaaattattagttgagttgattaaaatggtaaaattagtatcatttactaaaatacctttaataattgtagttagt 39005461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 25531005 - 25531070
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||| ||||||||||| |||| |||||  | ||||||||||||||||| ||||||||||    
T  25531005 aaatgattaatagtgttgattttaatggcaaaatgtgcatcatttactaaaacactcttattaatt 25531070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 6494919 - 6494963
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacg 117  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  6494919 tactccatccgtctctaaataatagtcgtttaaggtttatgcacg 6494963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 27170764 - 27170836
Alignment:
Q  116 cggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    ||||| |||| ||||||||||||  |||||||||| ||||||||||  |||||| ||||| ||||||||||||    
T  27170764 cggttgttaaagaaatgattaataatgttgattttaatggtaaaatgtgtatcaattacttaaacacccttat 27170836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 15464790 - 15464720
Alignment:
Q  130 atgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||||||| ||||||||||| ||||||||||  |||||||||||||||  || ||| |||||| ||||||    
T  15464790 atgattaatagtgttgattttaatggtaaaatgtgtatcatttactaaagtactcttgttaattatagtta 15464720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 25571498 - 25571456
Alignment:
Q  163 agtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  25571498 agtatcatttactaaaatacccttattagttgtagttagtgga 25571456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 39308711 - 39308638
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatta 190  Q
    |||| ||||| |||||||||  || ||||||||| || ||||||||| ||| |||||||||||||||| |||||    
T  39308711 ggtttttaagaaaatgattagatgagttgattttaatagtaaaattaatattatttactaaaacacccctatta 39308638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 24167080 - 24167024
Alignment:
Q  153 tggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| | | ||||||||||| |||||||||||| |||||||||| |||||    
T  24167080 tggtaaaattaatgttatttactaaaatacccttattaatagtagttagtgcagtag 24167024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 36790809 - 36790773
Alignment:
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36790809 actaaaacacccttattaattgtagttagttgagtag 36790773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 46602123 - 46602083
Alignment:
Q  169 atttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  46602123 atttactaaaacacccttattcattgtagttagtgcagtag 46602083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17609350 - 17609393
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||    
T  17609350 attaattgagttgattttaatggtaaaattagtataatttacta 17609393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17609593 - 17609636
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||    
T  17609593 attaattgagttgattttaatggtaaaattagtataatttacta 17609636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17609836 - 17609879
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||    
T  17609836 attaattgagttgattttaatggtaaaattagtataatttacta 17609879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17610079 - 17610122
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||    
T  17610079 attaattgagttgattttaatggtaaaattagtataatttacta 17610122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17610322 - 17610365
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||    
T  17610322 attaattgagttgattttaatggtaaaattagtataatttacta 17610365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 17783092 - 17783187
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| |||||| || ||||||||| || ||||| || || |||||||  || |  |||||||||||| | ||||||||| |||||||||||||||    
T  17783092 cacgggtattaaagagatgattaatagttttgatcttaatagtaaaatatgtgttgtttactaaaacatctttattaattatagttagtggagtag 17783187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 27215611 - 27215682
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    ||||||||| ||||||||||||  |||||||||| || |||||||  || ||| ||||||||||||| ||||    
T  27215611 ggttattaaagaaatgattaataatgttgatttttatagtaaaatgtgtgtcaattactaaaacacctttat 27215682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 30546413 - 30546451
Alignment:
Q  171 ttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  30546413 ttactaaaacacctttattaattgtagttattggagtag 30546451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 31665731 - 31665813
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaatt-agtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||| ||||||||||||| ||||||||||| | | ||||||||||||| |   |||||||| ||||||||| ||||||    
T  31665731 aaataattagttgtgttgattttaatggtaaaattaattttcatttactaaaatatatttattaatagtagttagtagagtag 31665813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 34636020 - 34635958
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgatt 135  Q
    |||||| ||||||||| |||| ||| | |||||||||  |||||| |||||||||||||||||    
T  34636020 tactccatccgtctctcaatattagccatttaaggtttgtgcacgattattaaggaaatgatt 34635958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 7348151 - 7348248
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| ||  |||| |||||| || |||||||| |||  |||||  |||||||| | |||||||| |||||||||| |||||| || |||||    
T  7348151 tgcacggttatgaaaaaaatcattaatagttttgattttaatgacaaaatatgtatcattaattaaaacactcttattaattatagttactgaagtag 7348248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 17610567 - 17610628
Alignment:
Q  142 gttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    ||||||||| |||||||||||||||| ||||| ||||| |  |||||||||| || ||||||    
T  17610567 gttgattttaatggtaaaattagtataatttattaaaatattcttattaattttaattagtg 17610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 27570031 - 27570060
Alignment:
Q  164 gtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||||||||||||||||||||||    
T  27570031 gtatcatttactaaaacacccttattaatt 27570060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 31327547 - 31327482
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||| |||  |||||||||| ||| ||||||  |||||||||||| |||||| ||||||||||    
T  31327547 aaatgatgaataatgttgattttaatgataaaatatgtatcatttactgaaacactcttattaatt 31327482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 27167906 - 27167966
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||||||||  |||| ||||| ||||||||||  |||||| ||||||||||||| ||||    
T  27167906 aaatgattaataatgtttattttaatggtaaaatgtgtatcaattactaaaacacctttat 27167966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 27903356 - 27903312
Alignment:
Q  161 ttagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||| |||| || | ||||||||||||||||||||    
T  27903356 ttagtatcatttaccaaaatactcgtattaattgtagttagtgga 27903312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 30107216 - 30107160
Alignment:
Q  142 gttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 198  Q
    ||||||||| |||||||||||| ||| ||||||| ||| |||||||| |||| ||||    
T  30107216 gttgattttaatggtaaaattaatattatttacttaaatacccttatgaattatagt 30107160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 1e-58; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 40900082 - 40899944
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    ||||||| |||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40900082 actactctctctatctctaaataatagtcatttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagtatcat 40899983  T
Q  171 ttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40899982 ttactaaaacacccttattaattgtagttagtggagtag 40899944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 2588019 - 2588142
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||       |    
T  2588019 tactccctccgtctctaaataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattag-------t 2588111  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||||||||||||||||||||||    
T  2588112 actaaaacacccttattaattgtagttagtg 2588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 21060779 - 21060656
Alignment:
Q  86 tctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccct 185  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| || ||    
T  21060779 tctaaataatagtcgtttaaggtttatgcacggttattagggaaatgattaattgtgtttattttgatggtaaaattagtattatttactaaaatactct 21060680  T
Q  186 tattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||    
T  21060679 tattaattgtagttagtggagtag 21060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 7827877 - 7828013
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||||| ||||||||||||  | |||| |||||||| |||| |||||||||||||||||  |||||||||||||||||||||    
T  7827877 tactccctccgtctctaaataataatcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcattt 7827976  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||| |||||||||||||||||||||||||||||    
T  7827977 attaaaatacccttattaattgtagttagtggagtag 7828013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 4818713 - 4818579
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| | |||||||||||||  |||||| ||||||||||||| |||||||||||||||||  || |||||||||||| |||||    
T  4818713 tactccctccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcattt 4818614  T
Q  173 actaaaacacccttattaattgtagttagtggagt 207  Q
    |||||||||||||||||||||||||||||||||||    
T  4818613 actaaaacacccttattaattgtagttagtggagt 4818579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 40530175 - 40530309
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| | ||||||||||||   |||||| |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||    
T  40530175 tactccctccgtctcacaatatttgtcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 40530274  T
Q  173 actaaaacacccttattaattgtagttagtggagt 207  Q
    |||||||||||||||||||||||||||||||||||    
T  40530275 actaaaacacccttattaattgtagttagtggagt 40530309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 41062114 - 41062240
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||| ||   || |||| ||||||| |||||||||||||| |||||||||||||||||    
T  41062114 tactcgctccgtctttaaataatagtcttttaaggttgatgcacggata---agaaaataattaattatgttgattttgatgataaaattagtatcattt 41062210  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    ||||||||||||||||||||||||||||||    
T  41062211 actaaaacacccttattaattgtagttagt 41062240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 1248562 - 1248691
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||| |||| |||||||||||||| ||  |||||||||||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||||    
T  1248562 tccgtctttaaaaaatagtcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaattaatatcatttactaaaa 1248661  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
     ||||||||||||||||||||||| |||||    
T  1248662 tacccttattaattgtagttagtgaagtag 1248691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 27542957 - 27542821
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| | ||||||||||| || |||||||||||||  |||||| ||||||||||||||||| |||||||||||||  |||||||||||| || |||||    
T  27542957 tactccattcgtctctaaattattgtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaataccattt 27542858  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| || ||||||||||||||||||||||||||    
T  27542857 actaaaatactcttattaattgtagttagtggagtag 27542821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 8698471 - 8698337
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| | || ||||||||||  |||||| ||||||| |||||||||||||||||||||||  ||||||||||||||  |||||    
T  8698471 tactccctccgtctcacaatatttgttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagttgcattt 8698372  T
Q  173 actaaaacacccttattaattgtagttagtggagt 207  Q
    || ||||||||||||||||||||||||||||||||    
T  8698371 accaaaacacccttattaattgtagttagtggagt 8698337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 6753629 - 6753745
Alignment:
Q  92 taatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaa 191  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||| | || ||||  |||||||||||||||||||||||||||| |||||||||||    
T  6753629 taatagtcgtttaaggtttatgcacgattattaagaaaatgattaatt-tattaatttcaatggtaaaattagtatcatttactaaaatacccttattaa 6753727  T
Q  192 ttgtagttagtggagtag 209  Q
    ||||||||||||||||||    
T  6753728 ttgtagttagtggagtag 6753745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 8724987 - 8725096
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||||||  |||||| ||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  8724987 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacacttattaattgtagtt 8725086  T
Q  200 agtggagtag 209  Q
    ||||||||||    
T  8725087 agtggagtag 8725096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 6315728 - 6315864
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| |||||||||||||| |  | | || ||||||||||||||||| |||||||| ||||  ||| |||||||| ||||||||    
T  6315728 tactccctccgtctctaaattatagtcgtttaagggttgtactcgattattaaggaaatgattgattgtgttaatttcaatgataaaattaatatcattt 6315827  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  6315828 actaaaatacccttattaattgtagttagtgaagtag 6315864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 27580763 - 27580626
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggtta-ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    ||||||| | ||| ||||||| |||||| |||||||||  |||||| ||| || |||||||||||||||||||||||||  |||||||||||| ||||||    
T  27580763 ctactcctttcgtttctaaattatagtc-tttaaggtttctgcacgattaatttaggaaatgattaattgtgttgatttcaatggtaaaattaatatcat 27580665  T
Q  171 ttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  27580664 ttactaaaatacccttattaattgtagttagtggagtag 27580626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 3348074 - 3348216
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatg--cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagt----- 165  Q
    ||||||||||||| ||||||||||||||||||||  |||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||         
T  3348074 tactccctccgtcactaaataatagtcgtttaagtctgatgggcacggttattaaggaaattattaattatgttgattttgatggtaaaattagtacccc 3348173  T
Q  166 atcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    || ||||| ||||||||||||||||| ||||||| ||| ||||    
T  3348174 attatttattaaaacacccttattaaatgtagttggtgaagta 3348216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 9515903 - 9515784
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    ||||||||||  |||| |||||||||||||||  |||||| ||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  9515903 cctccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtatcatttactaa 9515804  T
Q  178 aacacccttattaattgtag 197  Q
    |||| |||||||||| ||||    
T  9515803 aacatccttattaatagtag 9515784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 15818453 - 15818569
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatc--atttactaaaacacccttattaat 192  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||  ||||||||||||||| |  ||||||||||||||| ||||||||    
T  15818453 tagtcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagtagcatatttactaaaacacctttattaat 15818552  T
Q  193 tgtagttagtggagtag 209  Q
    |||| | ||||||||||    
T  15818553 tgtaatcagtggagtag 15818569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 32440303 - 32440174
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||| |||||||||||||| ||||||  |||| | || |||| |||||||||||||||||| ||||  ||| |||||||| ||||||||    
T  32440303 tactccctccgtctcaaaataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaattaatatcattt 32440204  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    ||||||| |||||||||||||||| |||||    
T  32440203 actaaaatacccttattaattgtacttagt 32440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 30512636 - 30512767
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||  |||||||    
T  30512636 tactccctccgtctctaaattatagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcattt 30512735  T
Q  173 actaaaacacccttattaa-ttgtagttagtg 203  Q
    ||||| | || ||||||||  |||||||||||    
T  30512736 actaagatactcttattaacatgtagttagtg 30512767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 30552976 - 30553107
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||  |||||||    
T  30552976 tactccctccgtctctaaattatagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcattt 30553075  T
Q  173 actaaaacacccttattaa-ttgtagttagtg 203  Q
    ||||| | || ||||||||  |||||||||||    
T  30553076 actaagatactcttattaacatgtagttagtg 30553107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 31655215 - 31655080
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| || |||||  |||| ||||||||||| |||  || ||| ||||||| |||||||||||||||||||||||  |||||||||||| ||||||||    
T  31655215 tactccatcggtctcacaatattagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcattt 31655116  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||| || | ||||||||||||||||||||||||||    
T  31655115 actataatatccttattaattgtagttagtggagta 31655080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 19930070 - 19929978
Alignment:
Q  111 atgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||    
T  19930070 atgcacgattattaagaaaatgattaattttgttgattttgatggtaaaactagcgtcatttactaaaacatccttattaattgtagttagtg 19929978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 29374487 - 29374368
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| ||||||||||||||| ||  | |||||||||| |||||||||||| |||||||||  ||| |||||||| || |||||||||||| ||| |||||    
T  29374487 aatattagtcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatgataaaattaatagcatttactaaaagacctttatt 29374388  T
Q  190 aattgtagttagtggagtag 209  Q
    ||||||||||||||||||||    
T  29374387 aattgtagttagtggagtag 29374368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 38508137 - 38508266
Alignment:
Q  72 ctactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||||| |||||||| |||||||||||||||||| ||  ||| || || ||||| ||||||||||||||||| ||||  |||||||||||||||||| |    
T  38508137 ctactccatccgtctcaaaataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtatcact 38508236  T
Q  172 tactaaaacacccttattaattgtagttag 201  Q
     | ||||| || ||||||||||||||||||    
T  38508237 cattaaaatactcttattaattgtagttag 38508266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 29570537 - 29570422
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||| ||  |||||| ||||||| |||||||||||||||||||||||| ||| |||||||| ||  |||| |||||||||| |||||    
T  29570537 aatattagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaattattagtatttgctaaaacacctttatt 29570438  T
Q  190 aattgtagttagtgga 205  Q
    ||||||||||| ||||    
T  29570437 aattgtagttaatgga 29570422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 2232046 - 2232149
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    |||||||||||||||  |||||| |||||||| |||||| |||||||||||||||  ||||||||||||||| |||||| ||||| || ||||||||||     
T  2232046 tagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttattaaaaaactcttattaattt 2232145  T
Q  195 tagt 198  Q
    ||||    
T  2232146 tagt 2232149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 6615870 - 6615965
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||||| |||||||  |||| |||||||||||||||||  ||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||    
T  6615870 tgcacgattattaaataaataattaattgtgttgatttcaatggtaaaattagtagcatttaccaaaacatccttattaattttagttagtggagt 6615965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 41496225 - 41496106
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||| ||||||||  | |||| |||||||  |||| |||||||||||||||||  ||||||||||||||  |||||| ||||||| | |||||    
T  41496225 aatattagtcgattaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggtaaaattagttgcatttagtaaaacatcattatt 41496126  T
Q  190 aattgtagttagtggagtag 209  Q
    ||||||||||||||||||||    
T  41496125 aattgtagttagtggagtag 41496106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 42803598 - 42803705
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    |||||||||| ||||||| |||| || ||||| |||||||||||| ||||  || ||||||||||||  ||||||||||||||| |||||||||||||||    
T  42803598 gtttaaggtttatgcacgattatcaaagaaataattaattgtgttcatttcaattgtaaaattagtagtatttactaaaacaccattattaattgtagtt 42803697  T
Q  200 agtggagt 207  Q
    | ||||||    
T  42803698 aatggagt 42803705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 6754160 - 6754055
Alignment:
Q  103 taaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    ||||||| ||||||  ||| |||| |||||||||||| |||||||||  || ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  6754160 taaggtttatgcactattaataagaaaatgattaatt-tgttgatttcaatagtaaaattaatgtcatttactaaaacactcttattaattgtagttagt 6754062  T
Q  203 ggagtag 209  Q
    |||||||    
T  6754061 ggagtag 6754055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 22848352 - 22848471
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| ||||||||||||| |  | || | |||||||||||  ||||||||||||||||||  || ||||||||| ||  ||||| |||||||||||||||    
T  22848352 aatattagtcgtttaaggcttgtacaagattattaaggaagcgattaattgtgttgatttcaatagtaaaattaatagtatttattaaaacacccttatt 22848451  T
Q  190 aattgtagttagtggagtag 209  Q
    ||||||||||| ||||||||    
T  22848452 aattgtagttaatggagtag 22848471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 41478978 - 41478856
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca-c 182  Q
    |||||||||||||||||| |||||||  ||| || || ||||| ||||||||||||||| | ||||  |||||||||||||| ||||||||||||| | |    
T  41478978 tctctaaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgtcatttactaaaatatc 41478879  T
Q  183 ccttattaattgtagttagtgga 205  Q
    |||| ||||||| ||||| ||||    
T  41478878 ccttgttaattgcagttaatgga 41478856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 15439319 - 15439398
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttag 201  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||||||||| ||  |||||||||||| ||||    
T  15439319 ttaaggaaatgattaattgtattaatttcaatggtaaaattagtatcatttactaaaatacttttattaattgtatttag 15439398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 4441128 - 4441047
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||||||||||||||| ||| |||||||| ||| ||||||||||| |   |||||||||||||||||||||||||    
T  4441128 aaataattaattgtgttgattttaatgataaaattaatattatttactaaaatatttttattaattgtagttagtggagtag 4441047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 41492464 - 41492331
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| |||| ||| |||||||||||||| |||||||  ||| || || ||||| ||||||||||||||| | ||||  ||||||||||||||  |||||    
T  41492464 tactctctccatctttaaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgacattt 41492365  T
Q  173 actaaaaca-cccttattaattgtagttagtgga 205  Q
    ||||||| | ||||| |||| |||||||| ||||    
T  41492364 actaaaatatcccttgttaaatgtagttaatgga 41492331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 843599 - 843480
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  ||||||| | ||||||||||  |||||| |||||||| |||||||||||| |||||||||  ||| ||||||   ||||||||    
T  843599 tactccctccgtctcacaataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaat---tatcattt 843503  T
Q  173 actaaaacacccttattaattgt 195  Q
    ||||| |  | ||||||||||||    
T  843502 actaacatgctcttattaattgt 843480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 5731892 - 5731808
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||||| ||||||||||||||||| ||||| ||   |||||  |||||||||||||||||| |||||||||| ||||||||||    
T  5731892 ttattaagaaaatgattaattgtgttcattttaataacaaaatgtgtatcatttactaaaacatccttattaatcgtagttagtg 5731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 29856182 - 29856073
Alignment:
Q  98 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtag 197  Q
    ||||||||| ||  |||||| ||||||||||||| |  ||||| ||||||||  ||| |||||||| ||||| || |||||| || ||||||||||||||    
T  29856182 tcgtttaagatttgtgcacgattattaaggaaataa--aattgcgttgatttcaatgataaaattaatatcacttgctaaaatactcttattaattgtag 29856085  T
Q  198 ttagtggagtag 209  Q
    ||||||||||||    
T  29856084 ttagtggagtag 29856073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 18841586 - 18841511
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||| ||||| ||| |||||||||||||||||||    
T  18841586 aaatgattaattatattgatttaaatggtaaaattaatatcatttaataaaataccgttattaattgtagttagtg 18841511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 209
Target Start/End: Complemental strand, 11904365 - 11904231
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    ||||||| ||| ||| |||||||||||||| |||  |||||| |  ||||| || ||||||||||| |||| ||  ||  |||||||| |||||||||||    
T  11904365 tccctccctctttaattaatagtcgtttaatgtttgtgcacgatctttaagaaagtgattaattgtattgagttcaataataaaattaatatcatttact 11904266  T
Q  176 aaaacaccctta-ttaattgtagttagtggagtag 209  Q
    |||| || |||| |||||||||||| |||||||||    
T  11904265 aaaatactcttatttaattgtagttggtggagtag 11904231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 11796173 - 11796254
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||||||||||||||||| ||| |||||||| ||| ||||||||||| |   ||||||||||||||||||| |||||    
T  11796173 aaatggttaattgtgttgattttaatgataaaattaatattatttactaaaatattattattaattgtagttagtgtagtag 11796254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 37184085 - 37184157
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||||||| | | ||||| ||||||||||    
T  37184085 aaatgattaattgagttgatttcaatggtaaaattaatatcatttactaaaatatctttattcattgtagtta 37184157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 39213470 - 39213372
Alignment:
Q  114 cacggttattaaggaaatgattaat---tgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||     || ||||||| |||| |||||  ||||| |||| |||||||| |||||||||| |||||||||||||||    
T  39213470 cacggttattaaggaaatgattaataacgttgatgattttaatggcaaaatatgtatcctttaataaaacactcttattaattatagttagtggagtag 39213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 5282504 - 5282398
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||  ||| |||||||||| ||||||||||  || || ||| ||||| ||||||||||||||| | ||||| ||| |||||| | ||| ||||    
T  5282504 tactccctccagctcaaaataatagttgtttaaggtttctgtacagtttttaagaaaatgattaattgtgctaattttaatgataaaataaatataattt 5282405  T
Q  173 actaaaa 179  Q
    |||||||    
T  5282404 actaaaa 5282398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 26285484 - 26285565
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| |||  |||||||| | ||||||||||||||||||||  ||||||| | ||||||||||||||| || |||||    
T  26285484 aaatgattagttgacttgattttaacggtaaaattagtatcatttatgaaaacacacgtattaattgtagttaatgaagtag 26285565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 38161442 - 38161499
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||  ||||||||||||||| | |||||||||| ||||||||||||||||    
T  38161442 atggtaaaattcatatcatttactaaaatatccttattaatcgtagttagtggagtag 38161499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 42922830 - 42922894
Alignment:
Q  85 ctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 149  Q
    |||||||| ||||||||||||| ||  |||| | |||||||| ||||||||||||||||||||||    
T  42922830 ctctaaattatagtcgtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 11761313 - 11761369
Alignment:
Q  136 aattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| || ||||| ||||    
T  11761313 aattgtgttgattttaatggtaaaattagtatca-ttactaaaatactcttataaatt 11761369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 18890555 - 18890612
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||| ||||||||| ||| |||| |||| |||||||||||||||||||||| |||||    
T  18890555 ttaagaaaatgattagttgagttgtttttaatggtaaaattagtatcatttattaaaa 18890612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 31748041 - 31747969
Alignment:
Q  76 tccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgatt 148  Q
    ||||||||||||  |||| || ||||||||| || ||||    ||||||||||||||||||||||||||||||    
T  31748041 tccctccgtctcacaatattattcgtttaagatttatgcgtcattattaaggaaatgattaattgtgttgatt 31747969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 9637934 - 9637875
Alignment:
Q  120 tattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||||||||||  |||||||||| ||| ||||||  || |||||||||||||    
T  9637934 tattaaggaaatgattaataatgttgattttaatgataaaatatgtgtcatttactaaaa 9637875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 7330587 - 7330533
Alignment:
Q  155 gtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| ||||||| | |||||||| |||||||||| || ||||||||||||    
T  7330587 gtaaaattaatatcattcagtaaaacactcttattaattctaattagtggagtag 7330533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 5129262 - 5129319
Alignment:
Q  152 atggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||| ||| |||||||| ||||  ||||||||||||||||| | ||||||    
T  5129262 atggtaaaattaatataatttactataacattcttattaattgtagttattagagtag 5129319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 20664683 - 20664620
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaa 178  Q
    ||||||| |||| |||||  ||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  20664683 cacggttcttaaagaaatcgttaattgagtttattttaatggtaaaattagtat-atttactaaa 20664620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 10097945 - 10098081
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||    
T  10097945 tactccctccgtatctaaataatagtcgtttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaattaatatcattt 10098044  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| ||||||||||||||||||||||||||||||||    
T  10098045 actataacacccttattaattgtagttagtggagtag 10098081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 31231893 - 31231756
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaa-ggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  31231893 tactccctccgtctctaaataatagtcttttaaaggttgatgcacggttattaaggaaatgatgaattgtgtcgattttgatggtaaaattaatatcatt 31231794  T
Q  172 tactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  31231793 tactgaaacacccttattaattgtagttagtggagtag 31231756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 34393915 - 34394035
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34393915 tccgtctctaaataatagtcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtataatttactaaaa 34394014  T
Q  180 cacccttattaattgtagtta 200  Q
    |||| ||||||||| ||||||    
T  34394015 cacctttattaattatagtta 34394035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 73 - 206
Target Start/End: Original strand, 2767245 - 2767378
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||| ||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2767245 tactccccccgtctctaaatagtagttgtttgaggttgatgcacggttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcattt 2767344  T
Q  173 actaaaacacccttattaattgtagttagtggag 206  Q
    | ||||||| |||||||| |||||||||||||||    
T  2767345 attaaaacatccttattatttgtagttagtggag 2767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 40996319 - 40996449
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||  || |||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  40996319 tactccatccgtctctaaataataatcgtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagtttcattt 40996418  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||||||||||||||||||||||    
T  40996419 actaaaacacccttattaattgtagttagtg 40996449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 80 - 208
Target Start/End: Original strand, 22771796 - 22771924
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  22771796 tccgtctctaaataattatcgtttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagtgtcatttattaaaa 22771895  T
Q  180 cacccttattaattgtagttagtggagta 208  Q
    |||||||||||||||||||||||| ||||    
T  22771896 cacccttattaattgtagttagtgaagta 22771924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 13335367 - 13335242
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||     
T  13335367 tctctaaataataatcgtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagtatcatttagtaaaacaca 13335268  T
Q  184 cttattaattgtagttagtggagtag 209  Q
     |||||||||| ||||||| ||||||    
T  13335267 tttattaattgcagttagtagagtag 13335242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 1875546 - 1875676
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||    ||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  1875546 tactccctccgtcttattatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 1875645  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||||||||||||||||||||||    
T  1875646 actaaaacacccttattaattgtagttagtg 1875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 10179901 - 10180037
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||||||| |||||||||||||||||  |||||| |||||||| |||||| || |||| |||||||  |||||||||||||||| ||||    
T  10179901 tactccctccgtctctaaaaaatagtcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataattt 10180000  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| || ||||||||||||||||||||||||||    
T  10180001 actaaaatacacttattaattgtagttagtggagtag 10180037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 36967508 - 36967413
Alignment:
Q  88 taaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36967508 taaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacc 36967413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 26626088 - 26626202
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattg 194  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||| | ||||||||||||    
T  26626088 tagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttattaaaatatccttattaattg 26626187  T
Q  195 tagttagtggagtag 209  Q
    |||||||||||||||    
T  26626188 tagttagtggagtag 26626202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 51267 - 51143
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||||| ||||||||||  |||||| |||||||| ||||||||||||||||||||||| || ||||||| |||||||||||| ||||    
T  51267 tccgtctctaaataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtatcatttacaaaaa 51169  T
Q  180 cacccttattaattgtagttagtgga 205  Q
    |||  |||||||||||||||||||||    
T  51168 cacatttattaattgtagttagtgga 51143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 21216078 - 21216191
Alignment:
Q  96 agtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgt 195  Q
    ||||||||||||||  |||| | |||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||| |||||||||||||    
T  21216078 agtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcatttactaaaacatccttattaattgt 21216177  T
Q  196 agttagtggagtag 209  Q
    ||||||||||||||    
T  21216178 agttagtggagtag 21216191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 39482777 - 39482645
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| |||||||||||| ||  |||||| |||||||| ||||||||||||||||||||||  | |||||||||||||  ||||    
T  39482777 tactccctccgtctcacaatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaattt 39482678  T
Q  173 actaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||||||||||||| |||||||||||    
T  39482677 actaaaacacccttattaattatagttagtgga 39482645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 9300064 - 9300203
Alignment:
Q  70 tactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    ||||||||||||| ||||  |||| |  | |||||||||| ||||||| |||||||| ||||||||  ||||||||||||| |||||||||||| || ||    
T  9300064 tactactccctccatctcacaatattgattgtttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaattaatagca 9300163  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9300164 tttactaaaacacccttattaattttagttagtggagtag 9300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 45425620 - 45425755
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||  |||| |||||||||||| || ||||| | |||||||| ||||||||||||||||||||||| |||||||||||| || |||||    
T  45425620 tactccttccgtctcataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaattaataacattt 45425719  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    | |||||||  |||||||||||||||||||||||||    
T  45425720 attaaaacattcttattaattgtagttagtggagta 45425755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 11976890 - 11977026
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| |||||||||||||||  |||| | |||||| |||||| |||||||||||||||||  |||||| ||| |||| |||||    
T  11976890 tactccctccgtctcataatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagtagcattt 11976989  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  11976990 actaaaatacccttattaattgtagttagtagagtag 11977026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 17719212 - 17719348
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| | ||||||||||||||||||||||||| ||  |||||| |||||||  ||||||||||||||  ||||||| |||||||| ||||||| ||||    
T  17719212 tactccgttcgtctctaaataatagtcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtattattt 17719311  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| | ||||||||||| |||||||||||||||    
T  17719312 actaaaatatccttattaattatagttagtggagtag 17719348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 31271171 - 31271047
Alignment:
Q  85 ctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccc 184  Q
    |||||||| ||||||||||||||||  || ||| |||||||| |||||||| |||||||||||||| |||||||||||| |||||| |||||||| || |    
T  31271171 ctctaaattatagtcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactc 31271072  T
Q  185 ttattaattgtagttagtggagtag 209  Q
    ||||||||| |||||||||||||||    
T  31271071 ttattaattatagttagtggagtag 31271047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 44761500 - 44761584
Alignment:
Q  125 aggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44761500 aggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtag 44761584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 5053156 - 5053243
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||||||    
T  5053156 ttaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacagtcttattaattgtagttagcggagtag 5053243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 209
Target Start/End: Complemental strand, 32476442 - 32476313
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||| | ||||||||||||||  ||||||||||||||| |||||||| ||| |||||||||  ||| |||||||| ||||||||| |||||    
T  32476442 tccgtctctaaattaaagtcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaattaatatcatttattaaaa 32476343  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
     |||||||||||||||||||| || |||||    
T  32476342 tacccttattaattgtagttaatgaagtag 32476313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 31082781 - 31082645
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||| |||||||  |||| |||| ||||| ||||  |||||| | ||||||||||||||||||||| |||||||| ||| ||||||||||   ||||    
T  31082781 tactcccgccgtctcacaatattagttgtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagtggtattt 31082682  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31082681 actaaaacacccttattaattatagttagtggagtag 31082645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 34948641 - 34948777
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||| | ||||||| ||||||||| ||  | |||  |||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  34948641 tactccatccgtctttgaataataatcgtttaagatttgtacacaattattaaggaaatgattaattgtgttgatttaaatagtaaaattagtatcattt 34948740  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||  ||||||  |||||||||||||||||||||||||    
T  34948741 acagaaacacatttattaattgtagttagtggagtag 34948777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 39405924 - 39405789
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||  |||| |||||||||||||||  |||||| |||||||||||||||||||||||||| ||||  ||| |||||||||||||||||    
T  39405924 tactccatccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcattt 39405825  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||| || | | |||||||||  |||||||||||||    
T  39405824 actataatatctttattaattacagttagtggagta 39405789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 7703105 - 7703230
Alignment:
Q  68 tatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 167  Q
    ||||||||||| |||||||  | ||||||||||||||| |||  || | | ||||||||||||| |||||||||||||||||  |||||||||||| |||    
T  7703105 tatactactccatccgtcttaacataatagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaattaatat 7703204  T
Q  168 catttactaaaacacccttattaatt 193  Q
    |||||||||||| |||||||||||||    
T  7703205 catttactaaaatacccttattaatt 7703230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 32678869 - 32678787
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    |||||||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  32678869 tctctaaataatagtcgtttaaagtttatacacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 32678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 39300894 - 39301018
Alignment:
Q  75 ctccctccgtctctaaataatagt---cgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    |||||||| |||||||||||||||   |||||||| ||  || ||| ||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||    
T  39300894 ctccctccatctctaaataatagtagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaattaatatcatt 39300993  T
Q  172 tactaaaacacccttattaattgta 196  Q
    |||||||| ||||| ||||||||||    
T  39300994 tactaaaaaaccctaattaattgta 39301018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 206
Target Start/End: Original strand, 42972472 - 42972595
Alignment:
Q  81 ccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    |||||||||||| ||  || |||||||||  |||||| |||||||| |||||||||||||| |||||||  |||||||||||| |||| ||||||||||     
T  42972472 ccgtctctaaattat--tcatttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaat 42972569  T
Q  181 acccttattaattgtagttagtggag 206  Q
    ||||||||||||| ||||||||||||    
T  42972570 acccttattaattatagttagtggag 42972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 396610 - 396701
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||| || | |||||||||||||||||| || |||||    
T  396610 gttattaaggaaatgattaattatgttgatttcaacggtaaaattagtatcatttactacaatatccttattaattgtagttaatgaagtag 396701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 203
Target Start/End: Original strand, 4428317 - 4428435
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    |||| ||||||||||||||||||||| ||| |   || ||||| ||||||||| ||||||||||||| ||| |||||||| ||||||||||||||| ||     
T  4428317 tctcaaaataatagtcgtttaaggtttatgtatattt-ttaagaaaatgattatttgtgttgattttaatgataaaattattatcatttactaaaataca 4428415  T
Q  184 cttattaattgtagttagtg 203  Q
     |||||||||||||||||||    
T  4428416 attattaattgtagttagtg 4428435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 7173065 - 7172940
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    ||||||||| ||||| ||||||||||  || |   ||||||| |||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||      
T  7173065 tctctaaattatagttgtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagtagcatttactaaaacata 7172966  T
Q  184 cttattaattgtagttagtggagtag 209  Q
     |||||||||||||||| || |||||    
T  7172965 tttattaattgtagttaatgaagtag 7172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 14854916 - 14855024
Alignment:
Q  101 tttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||||  | |||| |||| ||| |||||| | |||||||||||||| |||||||||||| |  ||||| |||||||||| ||||||||||||||||    
T  14854916 tttaaggtttgtacacgattatcaagaaaatgaatcattgtgttgattttaatggtaaaattaattgcatttgctaaaacacctttattaattgtagtta 14855015  T
Q  201 gtggagtag 209  Q
    |||||||||    
T  14855016 gtggagtag 14855024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 42887104 - 42887026
Alignment:
Q  131 tgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||  || | ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  42887104 tgattaattgtgttgatttcaatagcaaaattagtatcatttactaaaatacctttattaattgtagttagtggcgtag 42887026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 6795999 - 6796099
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||| ||||| |||||||||||| |||  |||||| |||||||  ||||||||||  | ||||||||| |||||||||||| ||||||||    
T  6795999 tactccctccgtctttaaattatagtcgtttaatgtttgtgcacgattattaataaaatgattaacagcgttgattttaatggtaaaattaatatcattt 6796098  T
Q  173 a 173  Q
    |    
T  6796099 a 6796099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 27294013 - 27294148
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| || ||||| |||||||||| | ||||||||  |||||| || |||| ||| | |||||||||||| ||||  ||| ||||||||||||| |||    
T  27294013 tactccttcggtctcaaaataatagttggttaaggtttgtgcacgatttttaaagaagttattaattgtgttcatttgaatgataaaattagtatctttt 27294112  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||| |   |||||||||| |||||||||||||    
T  27294113 actaaaatatatttattaattgcagttagtggagta 27294148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 41092107 - 41092028
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttag 201  Q
    |||| |||| ||||||||||||||||||  |||||||||||| ||||||||| ||||| || ||||||||||||||||||    
T  41092107 ttaaagaaacgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatactcttattaattgtagttag 41092028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 3117021 - 3117108
Alignment:
Q  120 tattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||| |||||||||||| ||||||||||  ||||||||||  || |||||||||||||||||||| |||||| |||||| ||||||||    
T  3117021 tattaacgaaatgattaatagtgttgatttcaatggtaaaat--gtgtcatttactaaaacacccttgttaattatagttaatggagtag 3117108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 44648541 - 44648621
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||||| ||  ||||||||  ||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  44648541 aaatgattagtttagttgatttcaatggtaaaattagtatcatttactaaaacatacttactaattgtaattagtggagta 44648621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 29226231 - 29226278
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  29226231 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagta 29226278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 5878993 - 5879075
Alignment:
Q  123 taaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||||||||  |||||||||| ||||||||||  |||||||| ||||||||||  ||||||||| | |||||||||    
T  5878993 taaggaaatgattaatattgttgattttaatggtaaaatatgtatcattcactaaaacacatttattaattatggttagtgga 5879075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 31331521 - 31331435
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||||||||||||||||||| |||||||  ||  |||||||| ||| ||||||||||| | | ||||||||||||||||||| ||||    
T  31331521 ttaaggaaatgattaattgtattgatttcaattataaaattattattatttactaaaatatcattattaattgtagttagtgaagta 31331435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 32678475 - 32678429
Alignment:
Q  163 agtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  32678475 agtatcatttactaaaacatccttattaattgtagttagtggagtag 32678429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 33765794 - 33765696
Alignment:
Q  101 tttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    |||||||||  |||||  || |||||||||||||||||| |||||||||| ||  |||||||| ||||||||||||| | ||  |||||||||||||||    
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattttaatactaaaattactatcatttactaatatacttttattaattgtagtt 33765696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 1739785 - 1739709
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    |||| ||||||| |||||||  || ||| ||||||||||||| |||||||||||||||||  |||||||||||||||    
T  1739785 aatattagtcgtctaaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagta 1739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 4924070 - 4924157
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| |||| |||| ||||||  ||||| |||||||||||||||| ||||||||||| | | |||||||||||||||| | ||||||    
T  4924070 ttaagaaaattattagttgtgtatattttaatggtaaaattagtattatttactaaaatatctttattaattgtagttaatagagtag 4924157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 11649729 - 11649650
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||||  |||| |||||| | ||||||||| ||  ||||||  ||||||||||||||||||||||||||||||    
T  11649729 cacggttattaaaaaaataattaatagggttgattttaataataaaatgtgtatcatttactaaaacacccttattaatt 11649650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 17824022 - 17823947
Alignment:
Q  134 ttaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||||||||||  ||| ||||||||||||| ||||||| || ||| ||||||||||||||||||| |||||    
T  17824022 ttaatcgtgttgatttcaatgataaaattagtatcttttactagaatacctttattaattgtagttagtgaagtag 17823947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 204
Target Start/End: Original strand, 36006838 - 36006972
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaagga-aatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    |||||| |||||||||| |||||||| | || |||||||  |||||| || | ||  | ||| |||| ||||||||||||| ||| |||||||| ||| |    
T  36006838 actacttcctccgtctcaaaataataattgtctaaggtttgtgcacgattttaaaaaataataattagttgtgttgattttaatgataaaattaatatta 36006937  T
Q  170 tttactaaaacacccttattaattgtagttagtgg 204  Q
    || ||||||| | || |||||||||||||||||||    
T  36006938 ttgactaaaatatccctattaattgtagttagtgg 36006972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 8741148 - 8741079
Alignment:
Q  114 cacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    ||||||||||||| ||||||||| | ||| | ||||||||||||||||  || |||||||||||||||||    
T  8741148 cacggttattaagaaaatgattagtggtgctaattttgatggtaaaatgtgtttcatttactaaaacacc 8741079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 5356709 - 5356657
Alignment:
Q  125 aggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    |||||||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  5356709 aggaaatgattagttgtgttgattttaatgataaaattaatatcatttactaa 5356657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 10953408 - 10953464
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||||||||||||||||||||||||||||||| ||| || ||||| || ||||||||    
T  10953408 ttattaaggaaatgattaattgtgttgattttaatgatataattaatagcatttact 10953464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 10961413 - 10961469
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 175  Q
    |||||||||||||||||||||||||||||||| ||| || ||||| || ||||||||    
T  10961413 ttattaaggaaatgattaattgtgttgattttaatgatataattaatagcatttact 10961469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 40109857 - 40109789
Alignment:
Q  112 tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    ||||||||| |||| ||||||||||||||  |||||||  || ||||||||||||| ||||||||||||    
T  40109857 tgcacggtttttaaagaaatgattaattgaattgatttcaatagtaaaattagtataatttactaaaac 40109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 9839791 - 9839914
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacc 183  Q
    |||| ||||||||||||||||| ||| ||  ||  || |||||||||||||||| ||| |||||||  | | |||||||||||| ||||| ||||| ||     
T  9839791 tctcaaaataatagtcgtttaatgtttatatacaatttttaaggaaatgattaaatgttttgatttcaacgataaaattagtattatttattaaaataca 9839890  T
Q  184 cttattaattgtagttagtggagt 207  Q
     | ||||||| |||||||| ||||    
T  9839891 ttcattaattatagttagttgagt 9839914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 39329132 - 39329065
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    ||||| ||||||||||||||||| ||||| ||| ||||||||||||| |||  ||||| |||||||||    
T  39329132 ttaagaaaatgattaattgtgttaattttaatgataaaattagtatcgttttttaaaatacccttatt 39329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 40028623 - 40028549
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||||| |||||||||  |||||||||||| || |||||| ||||| | | |||||||||||| |||||    
T  40028623 aaatgattaattatgttgatttcaatggtaaaattaatagcatttattaaaatatcattattaattgtatttagt 40028549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 25284991 - 25285028
Alignment:
Q  165 tatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||| |||||||||||||||||||||||||||||||    
T  25284991 tatcatatactaaaacacccttattaattgtagttagt 25285028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 34455688 - 34455771
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaa-ttagtatcatttactaaaacacccttattaattgtagttagtggag 206  Q
    |||||||||||| |||||||||||||||| ||| ||||| ||||||||||||| ||||| ||  ||| |||||||||||| |||||    
T  34455688 ttaaggaaatgactaattgtgttgattttaatgataaaatttagtatcattta-taaaatacgttta-taattgtagttaatggag 34455771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 6611859 - 6611767
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagt 165  Q
    |||||||||| |||   |||| |||||||||||| || |  |||| |||||||  |||||||||||| |||||||||  ||||||||||||||    
T  6611859 tactccctccatcttacaatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 6611767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 12559701 - 12559649
Alignment:
Q  127 gaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||||||||||||||| ||  |||||||| || ||||||||||||    
T  12559701 gaaatgattaattgtgttgattttaataataaaattaataccatttactaaaa 12559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 28072135 - 28072179
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaat 161  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||    
T  28072135 ggttattaaggaaatgattaatagtgttgattttaatggcaaaat 28072179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 29226578 - 29226618
Alignment:
Q  169 atttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  29226578 atttattaaaacactcttattaattgtagttagtggagtag 29226618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 27870937 - 27870898
Alignment:
Q  163 agtatcatttactaaaacacccttattaattgtagttagt 202  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  27870937 agtatcatttagtaaaacaaccttattaattgtagttagt 27870898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 39466064 - 39466127
Alignment:
Q  146 attttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||| |||||||||||||||||||||||| | | |||||||| || ||||||| |||||    
T  39466064 attttaatgctaaaattagtatcatttactaaaatatctttattaatcgtggttagtgcagtag 39466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 135663 - 135757
Alignment:
Q  115 acggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||| |||||| |||| |||||||  | | |||||| ||| ||||||  || |||||| |||||||||  ||||||||| |||||||||||||||    
T  135663 acggatattaatgaaaagattaataatatcgattttaatgataaaatatgtgtcatttgctaaaacactattattaattatagttagtggagtag 135757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 9550049 - 9549999
Alignment:
Q  111 atgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaat 161  Q
    ||||||| | ||||| |||||||||||||||||||||||| ||| ||||||    
T  9550049 atgcacgataattaatgaaatgattaattgtgttgattttaatgataaaat 9549999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 27976726 - 27976688
Alignment:
Q  164 gtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  27976726 gtatcatttagtaaaacagccttattaattgtagttagt 27976688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 28033995 - 28033957
Alignment:
Q  164 gtatcatttactaaaacacccttattaattgtagttagt 202  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  28033995 gtatcatttagtaaaacagccttattaattgtagttagt 28033957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 28073593 - 28073528
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||||||||||||| |||||| || |||||||| ||  ||||||  |||| ||||||||||||||    
T  28073593 ggttattaaggaaataattaatagttttgattttaattctaaaatatgtataatttactaaaacac 28073528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 35732192 - 35732147
Alignment:
Q  164 gtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||| || | ||||||||||| ||||||||||||    
T  35732192 gtatcatttactaaaatactcctattaattgtaattagtggagtag 35732147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 15809985 - 15810045
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    ||||| ||||||||| ||  ||||||||| |||||| ||||| ||| ||||||||||||||    
T  15809985 ttaagaaaatgattagttcagttgattttaatggtagaattaatattatttactaaaacac 15810045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 34281173 - 34281110
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    |||||||| |||||||||| | ||||||||||| |||||||| |  || ||||||||||||||||    
T  34281173 gttattaatgaaatgatta-tagtgttgattttaatggtaaagtacgtttcatttactaaaacac 34281110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 7932 - 8069
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||    
T  7932 actaccccctccgtctctaaataatagtcgtttacggttgatgcacggttattaaggaaatgattaattttgttgatttggatggtaaaattaatattat 8031  T
Q  171 ttactaaaacacccttattaattgtagttagtggagta 208  Q
    |||| |||||||||||||||||||||||||||||||||    
T  8032 ttaccaaaacacccttattaattgtagttagtggagta 8069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 37695616 - 37695755
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttga-tgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    |||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  37695616 actactccctccgtctctaaataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatca 37695715  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37695716 tttactaaaacacccttattaattgtagttagtggagtag 37695755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 19823173 - 19823041
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||| |||||||||| ||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19823173 tactccctctgtctctaaattatagttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtatcattt 19823074  T
Q  173 actaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||||||||||||||||||||    
T  19823073 actaaaacacccttattaattgtagttagtgga 19823041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 45711012 - 45710876
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  45711012 tactccttcggtctctaaataatagtcgtttaaggttgatgcacggttgttaagaaaatgattaattatgttgattttgatggtaaaattaatatcattt 45710913  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||  |||||||||||||||||||||||||    
T  45710912 actaaaacacttttattaattgtagttagtggagtag 45710876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 30190620 - 30190749
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  30190620 tccgtctctaaaaaatagtcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaa 30190719  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
     |||||||||||||||||||||||||||||    
T  30190720 tacccttattaattgtagttagtggagtag 30190749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 37497654 - 37497518
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37497654 tactccatccgtctctaaataataatcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtatcattt 37497555  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||| || |||| |||||||||||||||||    
T  37497554 actaaaacaccgttgttaactgtagttagtggagtag 37497518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 29023919 - 29024053
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  29023919 tactccctccgtcactaattaatagtcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagtatcattt 29024018  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||||||||  |||||||||||||||||||||||||    
T  29024019 actaaaaca-tcttattaattgtagttagtggagta 29024053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 80 - 209
Target Start/End: Complemental strand, 52291048 - 52290919
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  52291048 tccgtctctaaataataatcgtttaaggttgatgtacggttattaagaaaatgattaattgtattgattttgatggtaaaattagtaccatttattaaaa 52290949  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
    || ||||||||||| |||||||||||||||    
T  52290948 cagccttattaattatagttagtggagtag 52290919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 80 - 209
Target Start/End: Complemental strand, 53560372 - 53560243
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  53560372 tccgtctctaaataatagttgtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattttgatggtaaaatttgtatcatttactaaaa 53560273  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
    |||||||||||| | |||||||| ||||||    
T  53560272 cacccttattaaatatagttagtagagtag 53560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 37312112 - 37311976
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||| ||||||  |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  37312112 tactccctacgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 37312013  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37312012 actaaaaaacccttattaattgtagttagtggagtag 37311976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 43253814 - 43253952
Alignment:
Q  71 actactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcat 170  Q
    |||||||||||||||||  |||| |  ||||||||||||  |||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||    
T  43253814 actactccctccgtctcacaatattgatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcat 43253913  T
Q  171 ttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43253914 ttactaaaacacccttattaattgtagttagtggagtag 43253952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 8679007 - 8679137
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  8679007 tactccctccgtctctaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 8679106  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    ||||||| | ||||||||||| |||||||||    
T  8679107 actaaaagatccttattaattatagttagtg 8679137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 11905976 - 11905850
Alignment:
Q  81 ccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    |||||||||||||||| |||||||| ||| ||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| |    
T  11905976 ccgtctctaaataatactcgtttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagtatcatttactaaagc 11905877  T
Q  181 acccttattaattgtagttagtggagt 207  Q
    |||||||||||||||||||| ||||||    
T  11905876 acccttattaattgtagttaatggagt 11905850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 17652910 - 17652784
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    ||    
T  17652910 tactccatccgtctctaaataatagtcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----tt 17652815  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    ||||||||| |||||||||||||||||||||    
T  17652814 actaaaacatccttattaattgtagttagtg 17652784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 34957665 - 34957529
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||  ||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  34957665 tactcccttcgtctctaaataatagtcgtttaaggtttatggacaattactaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataattt 34957566  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||| ||| | ||||||||||| |||||||||||||||    
T  34957565 acttaaatatccttattaattatagttagtggagtag 34957529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 24569062 - 24569189
Alignment:
Q  82 cgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca 181  Q
    ||||||||||| ||||||| ||||| || ||||||| |||||||| ||||||||||||||||||||||  |||||||||||| ||| ||||||||||| |    
T  24569062 cgtctctaaattatagtcgcttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaata 24569161  T
Q  182 cccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||||||    
T  24569162 cccttattaattgtagttagtggagtag 24569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 54726618 - 54726511
Alignment:
Q  102 ttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttag 201  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||     
T  54726618 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatatcatttactaaaacatctttattaattgtagttaa 54726519  T
Q  202 tggagtag 209  Q
    ||||||||    
T  54726518 tggagtag 54726511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 10366603 - 10366715
Alignment:
Q  81 ccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    |||||||||||||| ||||||||||||||  |||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  10366603 ccgtctctaaataacagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaac 10366702  T
Q  181 acccttattaatt 193  Q
    || ||||||||||    
T  10366703 actcttattaatt 10366715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 36476746 - 36476610
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||| || || ||||||||||  | ||||||||||||| |||| ||| ||||||||||||   |||||||||||| ||||||||    
T  36476746 tactccctccgtctctaaattattgttgtttaaggtttgttcacggttattaagaaaataattgattgtgttgattgcaatggtaaaattaatatcattt 36476647  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  36476646 actaaaatacccttattaattgtagttagtagagtag 36476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 1778804 - 1778669
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| |||||||||||||||  |||| | |||||||||||||||||||||||||||||||  ||| |||||||| |  |||||    
T  1778804 tactccctccgtctcacaatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaattaatgacattt 1778705  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  1778704 actaaaacatccttatt-attgtagttagtggagtag 1778669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 38795506 - 38795372
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||| |||| ||||||||||||||||| |||  |||||| |  ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  38795506 tactccctccatctcaaaataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcattt 38795407  T
Q  173 actaaaacacccttattaattgtagttagtggagt 207  Q
    ||  |||  |||||||||||||||||| |||||||    
T  38795406 acccaaatgcccttattaattgtagttggtggagt 38795372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 209
Target Start/End: Original strand, 12736541 - 12736661
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||||||| |||||| |||  |||||| || ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| || ||||||||    
T  12736541 aaataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtatcatttactacaatacccttat 12736640  T
Q  189 taattgtagttagtggagtag 209  Q
    |||||||| |||||| |||||    
T  12736641 taattgtacttagtgtagtag 12736661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 34750630 - 34750522
Alignment:
Q  101 tttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||||  |||||| || || | ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||     
T  34750630 tttaaggtttgtgcacgatttttgatgaaatgattgattgtgttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagttg 34750531  T
Q  201 gtggagtag 209  Q
    |||||||||    
T  34750530 gtggagtag 34750522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 44301724 - 44301588
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||||||||||| ||||||| |||||||||||||  ||| ||  | ||||||||||  |||||| |||||||||  ||| |||||||||||||||||    
T  44301724 tactccctccgtctcaaaataatggtcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatgataaaattagtatcattt 44301625  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||| |||||||| ||||||| ||||||||||||    
T  44301624 actaaaatacccttatcaattgtaattagtggagtag 44301588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 51837920 - 51838048
Alignment:
Q  81 ccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    |||||||||||| |||||| |||||||||  |||| |  ||||||| ||||||||||||||||||||||  ||| |||||||| |||||||||||||||     
T  51837920 ccgtctctaaattatagtcatttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaat 51838019  T
Q  181 acccttattaattgtagttagtggagtag 209  Q
    |||||||||| |||||| |||||||||||    
T  51838020 acccttattagttgtagctagtggagtag 51838048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 23004381 - 23004471
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  23004381 ttattaaggaaatgattaattgtgtcgatttcaatggtaaaattagtagtatatactaaaacacccttattaattgtagttagtggagtag 23004471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 37772925 - 37773049
Alignment:
Q  81 ccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaac 180  Q
    ||||||||| || |||| |||||||||||  |||| | ||||||||||||||||||||||| ||||||   |||||||||||| |||||||||||||||     
T  37772925 ccgtctctatattatagccgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaat 37773024  T
Q  181 acccttattaattgtagttagtgga 205  Q
    ||||||||||||| |||| ||||||    
T  37773025 acccttattaattatagtcagtgga 37773049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 49830286 - 49830162
Alignment:
Q  79 ctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaa-tgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    |||||||||||||| |||||||||||| |||  |||||| |||||||  ||| |||||||||||||||||||  || ||||||||| |||||||||||||    
T  49830286 ctccgtctctaaattatagtcgtttaacgtttgtgcacgattattaaaaaaaatgattaattgtgttgatttcaatagtaaaattaatatcatttactaa 49830187  T
Q  178 aacacccttattaattgtagttagt 202  Q
    || ||| ||||||||||||||||||    
T  49830186 aataccattattaattgtagttagt 49830162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 43719415 - 43719293
Alignment:
Q  86 tctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacaccct 185  Q
    ||||||||||||||| |||| |||  | |||| | |||||  ||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||| |||    
T  43719415 tctaaataatagtcggttaaagtttgtacacgatcattaataaaatgattaattgtgttgattttaatggtaaaatta-tatcattcactgaaacatcct 43719317  T
Q  186 tattaattgtagttagtggagtag 209  Q
    ||||||||||||||||||||||||    
T  43719316 tattaattgtagttagtggagtag 43719293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 11632242 - 11632111
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||||| |||||||  |||| ||||| |||||| ||  |||||| |||||||  ||||||||||||||||||||||  | |||||||||||||  ||||    
T  11632242 tactcccaccgtctcataatattagtcatttaagatttgtgcacgattattaaa-aaatgattaattgtgttgatttcaacggtaaaattagtagtattt 11632144  T
Q  173 actaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||| |||||||||||||||||||||    
T  11632143 actaaaacacctttattaattgtagttagtgga 11632111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 28690762 - 28690865
Alignment:
Q  100 gtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtt 199  Q
    ||||||||||  |||||| ||||||| |||||||||||||||||||||||  | |||||||||| ||||||||||||||| | | |||||||||||||||    
T  28690762 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaattaatatcatttactaaaatatctttattaattgtagtt 28690861  T
Q  200 agtg 203  Q
    ||||    
T  28690862 agtg 28690865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 30711207 - 30711102
Alignment:
Q  101 tttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagtta 200  Q
    |||||||||  ||||  |||||||| ||||| ||||||| |||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  30711207 tttaaggtttgtgcattgttattaaagaaataattaattatgttgattttaatgataaaattaatatcatttactaaaacaccattattaattgtagtta 30711108  T
Q  201 gtggag 206  Q
     |||||    
T  30711107 atggag 30711102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 27471495 - 27471361
Alignment:
Q  75 ctccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttac 174  Q
    |||||||||||||  || | || ||||||||| ||  |||||| |||||||| |||||||||||| |||||||||  ||||| ||||||||  |||||||    
T  27471495 ctccctccgtctcacaacattaatcgtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagttgcatttac 27471396  T
Q  175 taaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||| |||||||||| ||  |||||||||||    
T  27471395 taaaacactcttattaattataagtagtggagtag 27471361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 3313395 - 3313281
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||||||  |||||| |||||||| |||||||||    ||| |||||  |||||||||||||||  ||| |||||||||||||||||    
T  3313395 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgatta----tgtcgatttcaatggtaaaattagtagaattaactaaaacacccttatt 3313300  T
Q  190 aattgtagttagtggagta 208  Q
    ||||||||||| |||||||    
T  3313299 aattgtagttaatggagta 3313281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 14194701 - 14194583
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||| ||||||||||||||  |||||| || |||| |||||||| ||||||||||||||  ||| ||||||||||| |||||||||||| ||  ||||    
T  14194701 aaataacagtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtaccatttactaaaatacttttat 14194602  T
Q  189 taattgtagttagtggagta 208  Q
     |||||| ||||||||||||    
T  14194601 gaattgt-gttagtggagta 14194583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 36460369 - 36460504
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||| |||   |||| ||||||||||| |||  |||||| |||||||| |||| |||||||||||| ||||  || |||||||||||| |||||    
T  36460369 tactccctccatcttacaatattagtcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagtaacattt 36460468  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    | ||||| |  ||||||||||||||||| |||||||    
T  36460469 attaaaatattcttattaattgtagttaatggagta 36460504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 5322892 - 5323019
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    ||||| |||||||| ||||| ||||| ||||||||||  |||||| |||||||  |||||||||||| |||||||||   || |||||||| ||||||||    
T  5322892 tactcactccgtctttaaattatagttgtttaaggtttgtgcacgattattaa--aaatgattaattatgttgatttcagtgataaaattaatatcattt 5322989  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    ||||||| || |||||||||| || |||||    
T  5322990 actaaaatacacttattaattataattagt 5323019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 19612068 - 19611935
Alignment:
Q  75 ctccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttac 174  Q
    ||||||||||||| | |||||| | |||||| |||  || ||| || ||||| || |||||||||||||||||||  ||| |||||||| ||| ||||||    
T  19612068 ctccctccgtctcgagataataattgtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta-tataatttac 19611970  T
Q  175 taaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| | ||||||||||||| |||||||||||||    
T  19611969 taaaatatccttattaattgttgttagtggagtag 19611935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 54477466 - 54477548
Alignment:
Q  127 gaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |   |||||||||||||||| ||||||||    
T  54477466 gaaatggttaattgtgttgattttaatggtaaaattaatatcatttactaaaatatttttattaattgtagttaatggagtag 54477548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 39931749 - 39931656
Alignment:
Q  115 acggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||||||| ||||| |||||| ||||||||||| |||| |||||  |||||||||| |||||||| |||||||||| ||||||||| ||||    
T  39931749 acggttattaaagaaattattaatagtgttgattttaatggcaaaatatgtatcatttattaaaacacacttattaattatagttagtgaagta 39931656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 50035170 - 50035299
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||  |||| ||| | |||||||||  |||| | |||||||| |||||| ||||| |||||||||  ||  ||||||||||| |||||    
T  50035170 tactccctccgtctcacaatattagacttttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagtagcattt 50035269  T
Q  173 actaaaacacccttattaattgtagttagt 202  Q
    || |||||||| || |||||||||||||||    
T  50035270 accaaaacaccgttgttaattgtagttagt 50035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 30682068 - 30682151
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||||||| || ||||| ||| |||||| ||||||||||||||||| |  ||||||||||||||||| ||||    
T  30682068 ttaaggaaatgattaattgttttaattttaatgttaaaatgagtatcatttactaaaataatcttattaattgtagttaatgga 30682151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 33491043 - 33491125
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaatt 162  Q
    ||||||||  |||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||  || ||||||||    
T  33491043 tccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 31158492 - 31158583
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacac 182  Q
    |||| |||||||||||||||  |||||| |||||||  ||||||||||||||| |||||| ||| ||||||||| || |||||||||||||||    
T  31158492 aatattagtcgtttaaggtttgtgcacgattattaaa-aaatgattaattgtgctgatttcgatagtaaaattaataacatttactaaaacac 31158583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 39043772 - 39043846
Alignment:
Q  138 ttgtgttgattttgatggtaaaatta---gtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||||||||||  ||||||||||||   |||||||||||||||| ||| |||||||||||||||||||||||||    
T  39043772 ttgtgttgatttcaatggtaaaattaatagtatcatttactaaaatacctttattaattgtagttagtggagtag 39043846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 3901151 - 3901233
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgg 204  Q
    ||||| |||||||||||||| || ||||  ||| |||||||| |||||||||||||||||  ||||||| |||||||||||||    
T  3901151 ttaagaaaatgattaattgtattaatttcaatgataaaattaatatcatttactaaaacattcttattagttgtagttagtgg 3901233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 209
Target Start/End: Complemental strand, 19609454 - 19609325
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||||||| |||||||| ||||||||| ||  || | |  | ||||| ||||||||| ||||||||||||  || ||||||||| |||||||||| ||||    
T  19609454 tccgtctcaaaataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaattaatatcatttacaaaaa 19609355  T
Q  180 cacccttattaattgtagttagtggagtag 209  Q
     |  ||||||| |||| |||||||||||||    
T  19609354 tattcttattacttgttgttagtggagtag 19609325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 51064771 - 51064864
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    |||| ||||||||||  |||| ||||||||||| ||| |||||||  ||||||  |||||||||||||||||| |||  |||||||||||||||    
T  51064771 tacttcctccgtctcataatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaattagta 51064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 7757669 - 7757591
Alignment:
Q  93 aatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 171  Q
    ||||| |||||| |||| ||||||| || ||||||||| ||||||||||||||||||  ||| |||||||| |||||||    
T  7757669 aatagccgtttagggtttatgcacgtttgttaaggaaaagattaattgtgttgatttcaatgataaaattattatcatt 7757591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 36462944 - 36463034
Alignment:
Q  118 gttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagta 208  Q
    ||||||||  |||||||| || || |||||||| ||| ||||||| ||| |||||||||||| | ||||||||||||| ||| ||||||||    
T  36462944 gttattaaaaaaatgattgatagtattgattttaatgttaaaattggtagcatttactaaaataaccttattaattgttgtttgtggagta 36463034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 27151605 - 27151521
Alignment:
Q  123 taaggaaatgattaattgtgttgattttgatggtaaaattagtatcattta--ctaaaacacccttattaattgtagttagtgga 205  Q
    |||||||||||||||| |||||| |||| ||| ||||||  ||||||||||  |||||||| | ||||||||| |||||||||||    
T  27151605 taaggaaatgattaatagtgttggttttaatgataaaatgtgtatcatttactctaaaacatcattattaattatagttagtgga 27151521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 42278776 - 42278695
Alignment:
Q  124 aaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||||||| |||  |||||||  || |||||||||  ||||||||||||||||| | |||||||| |||||||||||    
T  42278776 aaggaaatgattagttgaattgatttcaatcgtaaaattaacatcatttactaaaacactcatattaattatagttagtgga 42278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 47825177 - 47825087
Alignment:
Q  117 ggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||||||||  ||||||||  | ||||| ||||||||||||||||  || ||||||||||||| |||||||| |||| || ||| ||||||    
T  47825177 ggttattaaaaaaatgattggtagtgttaattttgatggtaaaatatgtttcatttactaaaatacccttatgaattataattaatggagt 47825087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 54225857 - 54225923
Alignment:
Q  141 tgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||| |||| |||| ||||||  || ||||||||||||||| ||||||||||| |||||||||||||    
T  54225857 tgttaatttggatgataaaatgtgtttcatttactaaaacagccttattaattatagttagtggagt 54225923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 33491408 - 33491448
Alignment:
Q  169 atttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  33491408 atttactaaaacactcttattaattatagttagtggagtag 33491448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 53864049 - 53863984
Alignment:
Q  121 attaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||||||||||||| | ||||||||||| |||||| |||  || | ||||||||||||||||||||    
T  53864049 attaaggaaatgattagtagtgttgattttcatggtataat--gttttatttactaaaacacccttat 53863984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 47825696 - 47825629
Alignment:
Q  140 gtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    ||||| ||||||||||||||||  || ||||||||||||| |||||||| |||| || ||| ||||||    
T  47825696 gtgttaattttgatggtaaaatatgtttcatttactaaaatacccttatgaattataattaatggagt 47825629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 38137403 - 38137535
Alignment:
Q  80 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta---tcatttacta 176  Q
    ||||||||  |||| |||||||||||||||  |||| | |||| || ||||| ||| ||||||| |||||  || ||||||||||||    ||| |||||    
T  38137403 tccgtctcataatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaatagtaaaattagtactgacatctacta 38137502  T
Q  177 aaacacccttattaattgtagttagtggagtag 209  Q
    ||| |  |||||||| |||||||||||| ||||    
T  38137503 aaatattcttattaactgtagttagtggggtag 38137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 27878789 - 27878724
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaatt 193  Q
    ||||||||||| ||||||||||| | || |||||  |||||||||  ||||||| |||||||||||    
T  27878789 aaatgattaatagtgttgattttaacggcaaaatgtgtatcattttttaaaacatccttattaatt 27878724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 45811768 - 45811727
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaatta 163  Q
    ||||| |||||||||||| |||||||||| ||||||||||||    
T  45811768 ttaagaaaatgattaattatgttgattttaatggtaaaatta 45811727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 52206849 - 52206906
Alignment:
Q  122 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    ||||||||||||||| ||   |||||||  |||||||||||| |||||||||||||||    
T  52206849 ttaaggaaatgattagttaaattgatttcaatggtaaaattaatatcatttactaaaa 52206906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 10973652 - 10973568
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||||| |||||||||||  |||| ||||| |||  |||||  |||||||||||||| | ||| || |||||| |||||||||    
T  10973652 ttattaagaaaatgattaataatgtttattttaatgacaaaatgtgtatcatttactaatagaccgttgttaattatagttagtg 10973568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 209
Target Start/End: Original strand, 48540969 - 48541089
Alignment:
Q  89 aaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttat 188  Q
    |||||||||| |||||| |||  |||||  |  |||||||||||| ||||| |||  ||||  ||  |||||||| ||||||||| ||||| |  |||||    
T  48540969 aaataatagttgtttaaagtttgtgcacaatgtttaaggaaatgactaattatgtcaatttctataataaaattaatatcatttattaaaatattcttat 48541068  T
Q  189 taattgtagttagtggagtag 209  Q
    |||||||| ||||| ||||||    
T  48541069 taattgtaattagttgagtag 48541089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 1866 - 1730
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||| ||||||||||||||||||||||| || || ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  1866 tactccctccatctctaaataatagtcgtttaagatttatacacggttattaagaaaatgattaattatgttgattttgatggtaaaattagtatcattt 1767  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    ||| |||||||| ||||||||||||| ||||||||||    
T  1766 acttaaacacccgtattaattgtagtcagtggagtag 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 2187 - 2055
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||  ||| |||||||| ||||||||    
T  2187 tactccctccgtctctaaataaaagtcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaattaatatcattt 2088  T
Q  173 actaaaacacccttattaattgtagttagtgga 205  Q
    ||||||||| |||||||||||||||||||||||    
T  2087 actaaaacatccttattaattgtagttagtgga 2055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 39245 - 39127
Alignment:
Q  78 cctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaa 177  Q
    ||||||||||||||||||| ||||||||||||  |||||  |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  39245 cctccgtctctaaataataatcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaa 39146  T
Q  178 aacacccttattaattgta 196  Q
    |||| | ||||||||||||    
T  39145 aacatcattattaattgta 39127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 252491 - 252575
Alignment:
Q  82 cgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 166  Q
    ||||||||||| ||||||||||||||||   | | | ||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  252491 cgtctctaaattatagtcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaattagta 252575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 20306 - 20442
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||| |||||||||||||||  ||||||| |  |||| | |||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  20306 tactccctccatctctaaataatagtactttaagggttgtgcaagattattaattaaatgattaattgtgttgattttgattgtaaaattagtatcattt 20405  T
Q  173 actaaaacacccttattaattgtagttagtggagtag 209  Q
    | ||||| |||||||||||||| |||||||| |||||    
T  20406 agtaaaatacccttattaattgcagttagtgaagtag 20442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 1770 - 1897
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||||||||| |||||||||||||  ||||| ||| ||||||| |||||||| |||| ||||||||||||||||||||| || |||||| ||||||||    
T  1770 tactccctccgtttctaaataatagttctttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcattt 1869  T
Q  173 actaaaacacccttattaattgtagtta 200  Q
    ||||||||||| ||||||||| ||||||    
T  1870 actaaaacacctttattaattatagtta 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 209
Target Start/End: Original strand, 135985 - 136126
Alignment:
Q  68 tatactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 167  Q
    |||| |||||||||||||||  |||| |||||||||||| || ||||||| |||||||  |||||||||||  |||||||||  |||||||||||| ||     
T  135985 tatattactccctccgtctcacaatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaattaatag 136084  T
Q  168 catttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  136085 catttactaaaacacccttattaattatagttagtgaagtag 136126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 33972 - 34102
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||| ||||||||||  |||| ||||| |||||||||  |||||| ||||||||||||||||||||||| |||| ||  || |||||||||||  |||||    
T  33972 tacttcctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattt 34071  T
Q  173 actaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||||||||||||||||||||||    
T  34072 actaaaacacccttattaattgtagttagtg 34102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 16256 - 16133
Alignment:
Q  77 ccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    |||||||||||  |||| |||| ||||||| ||  | |||| |||||||||||||||||||||||||||||||| ||| |||||||| || |||||||||    
T  16256 ccctccgtctcacaatattagtagtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaattaatagcatttacta 16157  T
Q  177 aaacacccttattaattgtagtta 200  Q
    |||||| |||||||||||||||||    
T  16156 aaacacacttattaattgtagtta 16133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 50366 - 50231
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 172  Q
    |||||| ||||||||  |||| |||||||||||||||  |||||| |||||||||||||||||||||||||| ||||  ||| |||||||||||||||||    
T  50366 tactccatccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcattt 50267  T
Q  173 actaaaacacccttattaattgtagttagtggagta 208  Q
    |||| || | | |||||||||  |||||||||||||    
T  50266 actataatatctttattaattacagttagtggagta 50231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 22437 - 22374
Alignment:
Q  146 attttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtag 209  Q
    ||||| ||| |||||||||||||||||||||||| | | |||||||| || ||||||| |||||    
T  22437 attttaatgctaaaattagtatcatttactaaaatatctttattaatcgtggttagtgcagtag 22374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 5555 - 5416
Alignment:
Q  70 tactactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatca 169  Q
    ||||||||| | | ||||||||| ||| ||||||||||||  | || | |||||||| |||||||||| |||||||| ||  |||||||||||| |||||    
T  5555 tactactccattcatctctaaattataatcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatca 5456  T
Q  170 tttactaaaacacccttattaattgtagttagtggagtag 209  Q
    |||||||||| | ||||||||||| |||||||||||||||    
T  5455 tttactaaaatatccttattaattttagttagtggagtag 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 17180 - 17070
Alignment:
Q  90 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 189  Q
    |||| |||||||||||||||  |||| | |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||| || ||||||||||||    
T  17180 aatattagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttattagaacacccttatt 17081  T
Q  190 aattgtagtta 200  Q
    |||| ||||||    
T  17080 aattatagtta 17070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 105820 - 105710
Alignment:
Q  99 cgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 198  Q
    |||||||| || ||||| | |||||||| ||||||||||||||||| ||||  |||||||||||| || | |||||||||||||||||||||||||||||    
T  105820 cgtttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaattaatagcgtttactaaaacacccttattaattgtagt 105721  T
Q  199 tagtggagtag 209  Q
    ||||| |||||    
T  105720 tagtgaagtag 105710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 697 - 771
Alignment:
Q  133 attaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagt 207  Q
    |||||||||||||||||  |||||||||||| || |||||||||||||||| ||||| |||||||||||||||||    
T  697 attaattgtgttgatttcaatggtaaaattaatagcatttactaaaacacctttattgattgtagttagtggagt 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 6260 - 6341
Alignment:
Q  95 tagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacta 176  Q
    ||||||||||| |||  |||||| || |||| |||||||||||||||||||||| | ||| |||||||||||||||| ||||    
T  6260 tagtcgtttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagtatcattcacta 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 12114 - 12041
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaat 192  Q
    |||||||||||||||||| |  |||||||||| |||| |||||  ||||||||||||||||||| |||||||||    
T  12114 ttattaaggaaatgattactgatgttgattttaatggcaaaatgtgtatcatttactaaaacactcttattaat 12041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 494 - 435
Alignment:
Q  146 attttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtgga 205  Q
    ||||| ||| |||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  494 attttaatgttaaaattagtatcattcaataaaacacccttattaatagtagttagtgga 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 126287 - 126203
Alignment:
Q  119 ttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtg 203  Q
    |||||||||||||||||||| ||||| ||||| |||  |||||  |||||||||||||||| ||  || |||||| |||||||||    
T  126287 ttattaaggaaatgattaatagtgtttattttaatgacaaaatgtgtatcatttactaaaagactgttgttaattatagttagtg 126203  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 6888 - 6793
Alignment:
Q  84 tctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaa 179  Q
    |||| |||||| ||| ||||||||||  |||  | || |||||||||||||||||||| || ||||  ||| |||||||||||| |||||||||||    
T  6888 tctcaaaataacagttgtttaaggtttgtgcgtgatttttaaggaaatgattaattgttttaatttcaatgataaaattagtattatttactaaaa 6793  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 14178 - 14223
Alignment:
Q  128 aaatgattaattgtgttgattttgatggtaaaattagtatcattta 173  Q
    |||||||||| |||||||||||| || |||||||||||||||||||    
T  14178 aaatgattaaatgtgttgattttaatcgtaaaattagtatcattta 14223  T

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Target: scaffold0470 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 1147 - 1055
Alignment:
Q  73 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagt 165  Q
    |||||||||| |||   |||| |||||||||||| || |  |||| |||||||  |||||||||||| |||||||||  ||||||||||||||    
T  1147 tactccctccatcttacaatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 1055  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 143944 - 143900
Alignment:
Q  121 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 165  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  143944 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 143900  T

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