View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8671_low_13 (Length: 303)
Name: NF8671_low_13
Description: NF8671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8671_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 37 - 292
Target Start/End: Original strand, 44244616 - 44244871
Alignment:
| Q |
37 |
aaacttaagttaaaccttgatacactaatatttatttttcacgctttgttgaactggcatagatgagatcgccatcttgtgaggacaaataatactttga |
136 |
Q |
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| T |
44244616 |
aaacttaagttaaaccttgatacactaatatttatttttcacgctttgttgaactggcatagatgagatcgccatcttgtgaggacaaataatactttga |
44244715 |
T |
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| Q |
137 |
acttctacataggagcaatatcagttgttaaagcttcaaacattagttcaacttggattatgagacacttttcttcgattgatttcatgatgtttatata |
236 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
44244716 |
acttctacataggagcaatatcagttgttaaagcttcaaacattagttcaacttggattatgaaacacttttcttcgattgatttcatgatgtttatata |
44244815 |
T |
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| Q |
237 |
acaagatgttcccagatcttgttataannnnnnnngttaaagtatggagtattcat |
292 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
44244816 |
acaagatgttcccagatcttgttataattttttttgttaaagtatggagtattcat |
44244871 |
T |
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