View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8671_low_17 (Length: 267)
Name: NF8671_low_17
Description: NF8671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8671_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 42095301 - 42095147
Alignment:
| Q |
102 |
atcattaatgtatttatttatattgttgaaggtatttcatttgtgattgtataatggttatatagttaatgcggtggatatttttcgaaggggaaggggc |
201 |
Q |
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| T |
42095301 |
atcattaatgtatttatttatattgttgaaggtatttcatttgtgattgtataatggttatatagttaatgcggtggatatttttcgaaggggaaggggc |
42095202 |
T |
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| Q |
202 |
actcataatctcaagttcgactaatgttgtttcaattttactattttcttctcac |
256 |
Q |
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| T |
42095201 |
actcataatctcaagttcgactaatgttgtttcaattttactatttccttctcac |
42095147 |
T |
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