View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8672_low_54 (Length: 230)
Name: NF8672_low_54
Description: NF8672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8672_low_54 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 43598619 - 43598813
Alignment:
| Q |
18 |
tactatacttaccgttaatttaagcatgcacgtccatttcttacagtttctaaatatatgcaacaaattaatcaatgattttatgtttgtaattttatca |
117 |
Q |
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| T |
43598619 |
tactatacttaccgttaatttaagcatgcacgtccatttcttacagtttcttaatatatgcaacaaattaatcaatgattttatgtttgtaattttatca |
43598718 |
T |
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| Q |
118 |
ggtgattgccacatttactgcaattggaatcatctttatccctattggtcttgcatcattgttttcatcagggaaggtaatgaacataacaatgt |
212 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43598719 |
ggtgattgccacatttactgcaattggaataatctttatccctattggtcttgcatcattgttttcatcagggaaggtaatgaacataacaatgt |
43598813 |
T |
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