View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8672_low_7 (Length: 482)

Name: NF8672_low_7
Description: NF8672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8672_low_7
NF8672_low_7
[»] scaffold0045 (3 HSPs)
scaffold0045 (261-467)||(39879-40091)
scaffold0045 (259-467)||(25285-25496)
scaffold0045 (261-459)||(32503-32704)
[»] scaffold0457 (1 HSPs)
scaffold0457 (271-467)||(4740-4939)
[»] chr8 (37 HSPs)
chr8 (17-121)||(4786341-4786445)
chr8 (57-126)||(39954277-39954346)
chr8 (51-118)||(34897071-34897138)
chr8 (47-121)||(13844599-13844673)
chr8 (57-117)||(24362209-24362269)
chr8 (57-121)||(31236580-31236644)
chr8 (56-119)||(27213538-27213601)
chr8 (51-121)||(7658449-7658519)
chr8 (63-128)||(4611532-4611597)
chr8 (72-121)||(14134706-14134755)
chr8 (59-128)||(14634137-14634206)
chr8 (60-127)||(11927083-11927150)
chr8 (57-128)||(22651968-22652039)
chr8 (47-109)||(18407701-18407763)
chr8 (39-109)||(22595968-22596038)
chr8 (57-123)||(25192348-25192414)
chr8 (58-127)||(11944658-11944727)
chr8 (17-122)||(20785467-20785572)
chr8 (51-112)||(29776022-29776083)
chr8 (77-121)||(11803271-11803315)
chr8 (65-121)||(12570737-12570793)
chr8 (57-109)||(29510319-29510371)
chr8 (51-98)||(27101501-27101548)
chr8 (66-121)||(33382022-33382077)
chr8 (57-127)||(15816126-15816196)
chr8 (63-121)||(22493492-22493550)
chr8 (83-121)||(26902178-26902216)
chr8 (70-120)||(34222952-34223002)
chr8 (57-111)||(38278188-38278241)
chr8 (65-118)||(12570514-12570567)
chr8 (65-102)||(18067956-18067993)
chr8 (64-121)||(20679398-20679455)
chr8 (57-102)||(41838145-41838190)
chr8 (71-111)||(3025557-3025597)
chr8 (77-121)||(12985404-12985448)
chr8 (24-127)||(25566802-25566903)
chr8 (57-117)||(31109525-31109585)
[»] chr6 (56 HSPs)
chr6 (17-121)||(7377931-7378035)
chr6 (44-128)||(8931598-8931682)
chr6 (57-121)||(9658871-9658935)
chr6 (57-128)||(26562681-26562752)
chr6 (17-121)||(20371113-20371218)
chr6 (57-121)||(7265596-7265660)
chr6 (57-117)||(19040344-19040404)
chr6 (57-128)||(9027170-9027241)
chr6 (63-119)||(4040464-4040520)
chr6 (57-121)||(9629375-9629439)
chr6 (65-128)||(9025490-9025553)
chr6 (65-111)||(32511679-32511725)
chr6 (39-128)||(16488586-16488675)
chr6 (57-117)||(5000633-5000693)
chr6 (57-121)||(5732513-5732577)
chr6 (57-128)||(10339121-10339193)
chr6 (24-121)||(24115850-24115953)
chr6 (57-128)||(16766689-16766760)
chr6 (77-127)||(14796187-14796237)
chr6 (57-111)||(17341677-17341731)
chr6 (57-119)||(30866149-30866211)
chr6 (57-118)||(10842524-10842585)
chr6 (56-121)||(13360375-13360440)
chr6 (57-118)||(13851728-13851789)
chr6 (57-121)||(7086787-7086851)
chr6 (47-111)||(12686408-12686471)
chr6 (17-128)||(18367783-18367899)
chr6 (57-121)||(19044456-19044520)
chr6 (57-121)||(33001292-33001356)
chr6 (57-121)||(34172185-34172249)
chr6 (65-116)||(5462686-5462737)
chr6 (17-128)||(5970104-5970215)
chr6 (77-112)||(17411880-17411915)
chr6 (42-109)||(18252766-18252833)
chr6 (57-128)||(34073343-34073414)
chr6 (60-121)||(7027236-7027298)
chr6 (39-128)||(8713953-8714043)
chr6 (58-128)||(9107366-9107436)
chr6 (46-112)||(24833245-24833311)
chr6 (57-119)||(25096415-25096477)
chr6 (60-121)||(30851597-30851656)
chr6 (38-120)||(6665182-6665268)
chr6 (68-121)||(9617437-9617490)
chr6 (77-118)||(11591876-11591917)
chr6 (60-109)||(25207759-25207808)
chr6 (47-98)||(3209363-3209415)
chr6 (57-121)||(7938108-7938172)
chr6 (57-109)||(7977845-7977897)
chr6 (77-121)||(11784219-11784263)
chr6 (57-109)||(12696316-12696368)
chr6 (77-121)||(14721253-14721297)
chr6 (77-121)||(15443707-15443751)
chr6 (57-109)||(17841604-17841656)
chr6 (66-110)||(31579239-31579283)
chr6 (57-121)||(32298610-32298674)
chr6 (57-109)||(34595126-34595178)
[»] chr1 (65 HSPs)
chr1 (47-121)||(29163384-29163458)
chr1 (63-121)||(2784554-2784612)
chr1 (17-102)||(10474999-10475084)
chr1 (17-118)||(17831537-17831638)
chr1 (57-121)||(2896124-2896188)
chr1 (57-121)||(36878453-36878517)
chr1 (58-128)||(5376496-5376566)
chr1 (57-121)||(13997875-13997939)
chr1 (57-128)||(6427342-6427413)
chr1 (57-128)||(9828036-9828107)
chr1 (58-121)||(13436451-13436514)
chr1 (57-120)||(34257914-34257977)
chr1 (57-111)||(398778-398832)
chr1 (51-121)||(23636052-23636122)
chr1 (47-112)||(25098567-25098632)
chr1 (60-121)||(39953149-39953210)
chr1 (57-109)||(1262876-1262928)
chr1 (17-109)||(3490405-3490497)
chr1 (57-121)||(10572592-10572656)
chr1 (64-128)||(20157346-20157410)
chr1 (60-128)||(25361881-25361949)
chr1 (57-121)||(28674792-28674856)
chr1 (57-120)||(609462-609525)
chr1 (57-128)||(1486705-1486776)
chr1 (57-128)||(7918207-7918278)
chr1 (57-108)||(12443476-12443527)
chr1 (58-121)||(38503313-38503376)
chr1 (77-128)||(44482242-44482293)
chr1 (65-127)||(48148034-48148097)
chr1 (63-121)||(1864883-1864941)
chr1 (51-121)||(21530675-21530745)
chr1 (57-111)||(34298428-34298482)
chr1 (65-127)||(34371714-34371775)
chr1 (60-121)||(5898269-5898330)
chr1 (17-121)||(6415004-6415109)
chr1 (57-114)||(15641040-15641097)
chr1 (39-128)||(24577182-24577271)
chr1 (57-109)||(113291-113343)
chr1 (57-121)||(9709812-9709876)
chr1 (57-121)||(19562624-19562688)
chr1 (17-109)||(22881631-22881723)
chr1 (60-120)||(23714708-23714768)
chr1 (65-121)||(40181871-40181927)
chr1 (42-117)||(10233230-10233305)
chr1 (62-121)||(12993191-12993250)
chr1 (39-98)||(21057757-21057816)
chr1 (57-128)||(5944273-5944346)
chr1 (83-121)||(30749858-30749896)
chr1 (83-121)||(30771309-30771347)
chr1 (47-121)||(38075973-38076047)
chr1 (17-109)||(38078676-38078769)
chr1 (60-109)||(41877485-41877534)
chr1 (64-128)||(9629896-9629960)
chr1 (72-112)||(12713339-12713379)
chr1 (72-112)||(12717430-12717470)
chr1 (57-121)||(14332645-14332709)
chr1 (57-117)||(17754303-17754363)
chr1 (57-109)||(19058871-19058923)
chr1 (64-112)||(19324561-19324609)
chr1 (68-112)||(21038086-21038130)
chr1 (63-107)||(26238129-26238173)
chr1 (57-109)||(27471581-27471633)
chr1 (61-109)||(31015039-31015087)
chr1 (72-112)||(35999334-35999374)
chr1 (57-121)||(43492497-43492561)
[»] chr7 (55 HSPs)
chr7 (58-121)||(19206043-19206106)
chr7 (57-121)||(22484017-22484081)
chr7 (57-128)||(32308112-32308183)
chr7 (57-129)||(5235978-5236050)
chr7 (57-121)||(20549783-20549847)
chr7 (58-110)||(29787383-29787435)
chr7 (57-128)||(22602706-22602777)
chr7 (63-121)||(27093416-27093474)
chr7 (63-121)||(27184827-27184885)
chr7 (51-128)||(1433440-1433517)
chr7 (51-128)||(24339628-24339705)
chr7 (57-121)||(2948675-2948739)
chr7 (57-101)||(11722121-11722165)
chr7 (57-117)||(22868034-22868094)
chr7 (77-121)||(23849461-23849505)
chr7 (57-121)||(26733296-26733360)
chr7 (57-128)||(27945033-27945104)
chr7 (47-121)||(3554509-3554583)
chr7 (71-121)||(3721099-3721149)
chr7 (62-128)||(5548673-5548739)
chr7 (57-127)||(6630909-6630979)
chr7 (71-121)||(24146822-24146872)
chr7 (83-121)||(39138462-39138500)
chr7 (60-121)||(5835242-5835303)
chr7 (68-117)||(17851434-17851483)
chr7 (60-109)||(23191891-23191940)
chr7 (59-108)||(30731031-30731080)
chr7 (60-128)||(7758317-7758385)
chr7 (57-121)||(9482926-9482990)
chr7 (17-128)||(9778454-9778563)
chr7 (57-129)||(21140977-21141049)
chr7 (57-109)||(25481894-25481946)
chr7 (65-112)||(8160416-8160463)
chr7 (58-121)||(21826266-21826329)
chr7 (57-128)||(26329378-26329449)
chr7 (77-120)||(27732243-27732286)
chr7 (58-109)||(28155563-28155614)
chr7 (77-127)||(35297669-35297719)
chr7 (57-127)||(49107813-49107882)
chr7 (77-118)||(12278847-12278888)
chr7 (60-109)||(13770686-13770735)
chr7 (57-128)||(17307888-17307956)
chr7 (72-129)||(18013069-18013126)
chr7 (57-121)||(29769447-29769509)
chr7 (64-121)||(32287466-32287523)
chr7 (70-110)||(2424619-2424659)
chr7 (57-121)||(2425736-2425800)
chr7 (57-109)||(11061091-11061143)
chr7 (57-121)||(15680801-15680865)
chr7 (57-121)||(15902814-15902878)
chr7 (65-121)||(19992001-19992057)
chr7 (57-121)||(21568625-21568689)
chr7 (58-102)||(24289813-24289857)
chr7 (17-69)||(25822607-25822659)
chr7 (64-100)||(36297369-36297405)
[»] scaffold0123 (1 HSPs)
scaffold0123 (38-120)||(44529-44611)
[»] chr3 (48 HSPs)
chr3 (63-121)||(7614418-7614476)
chr3 (57-111)||(5407260-5407314)
chr3 (51-121)||(8383243-8383313)
chr3 (47-112)||(1438786-1438851)
chr3 (57-121)||(18426941-18427005)
chr3 (63-121)||(7928448-7928506)
chr3 (39-121)||(8789553-8789635)
chr3 (47-121)||(35222920-35222994)
chr3 (51-116)||(4469836-4469901)
chr3 (52-121)||(32429383-32429452)
chr3 (17-109)||(21479070-21479162)
chr3 (40-128)||(34185119-34185207)
chr3 (57-100)||(5441055-5441098)
chr3 (65-120)||(10690266-10690321)
chr3 (57-112)||(12703999-12704054)
chr3 (47-121)||(40993338-40993413)
chr3 (57-127)||(28678295-28678365)
chr3 (51-112)||(11493373-11493434)
chr3 (57-102)||(11610513-11610558)
chr3 (17-109)||(14747513-14747606)
chr3 (58-111)||(34307793-34307846)
chr3 (57-109)||(4987306-4987358)
chr3 (57-121)||(8842322-8842385)
chr3 (57-117)||(32804547-32804607)
chr3 (57-117)||(49505161-49505221)
chr3 (57-128)||(9800032-9800103)
chr3 (58-121)||(13807162-13807225)
chr3 (47-110)||(15544675-15544738)
chr3 (57-112)||(16192762-16192817)
chr3 (51-110)||(25064895-25064954)
chr3 (58-121)||(25093495-25093558)
chr3 (66-121)||(45451554-45451609)
chr3 (57-111)||(14840304-14840358)
chr3 (57-102)||(4466622-4466667)
chr3 (63-112)||(11313812-11313861)
chr3 (17-121)||(14027961-14028063)
chr3 (59-108)||(14979175-14979224)
chr3 (57-122)||(26508102-26508167)
chr3 (57-126)||(28917993-28918062)
chr3 (66-111)||(30994895-30994940)
chr3 (68-121)||(38731221-38731274)
chr3 (47-100)||(40052314-40052367)
chr3 (57-109)||(4990982-4991034)
chr3 (57-109)||(14209105-14209157)
chr3 (60-112)||(14618776-14618828)
chr3 (65-109)||(21257001-21257045)
chr3 (57-117)||(26290363-26290423)
chr3 (57-109)||(34910309-34910361)
[»] chr4 (31 HSPs)
chr4 (57-128)||(22234886-22234958)
chr4 (63-121)||(8423721-8423779)
chr4 (57-119)||(40613442-40613504)
chr4 (47-128)||(46160878-46160959)
chr4 (39-121)||(9996816-9996896)
chr4 (66-121)||(16189710-16189765)
chr4 (58-111)||(1747205-1747258)
chr4 (59-128)||(13134444-13134513)
chr4 (57-109)||(23293001-23293053)
chr4 (57-112)||(36635316-36635371)
chr4 (57-117)||(35723391-35723452)
chr4 (17-121)||(15029717-15029821)
chr4 (64-112)||(22440612-22440660)
chr4 (64-120)||(26504303-26504359)
chr4 (83-127)||(44132641-44132685)
chr4 (72-112)||(49652984-49653024)
chr4 (57-112)||(903914-903969)
chr4 (64-127)||(38148722-38148785)
chr4 (83-121)||(19097897-19097935)
chr4 (57-111)||(24343499-24343553)
chr4 (66-116)||(30522923-30522973)
chr4 (57-129)||(4099953-4100028)
chr4 (64-121)||(5775361-5775418)
chr4 (57-102)||(7012058-7012103)
chr4 (57-102)||(11651156-11651201)
chr4 (57-126)||(13783273-13783342)
chr4 (62-107)||(17446068-17446113)
chr4 (57-114)||(21539877-21539934)
chr4 (67-128)||(30982874-30982935)
chr4 (57-109)||(49431017-49431070)
chr4 (63-111)||(35161034-35161082)
[»] scaffold0044 (1 HSPs)
scaffold0044 (57-128)||(53172-53243)
[»] chr5 (38 HSPs)
chr5 (57-128)||(3966495-3966566)
chr5 (52-121)||(28588677-28588746)
chr5 (57-121)||(17123040-17123104)
chr5 (72-128)||(22423808-22423864)
chr5 (39-128)||(2436896-2436985)
chr5 (39-128)||(21814235-21814324)
chr5 (57-122)||(27144455-27144520)
chr5 (57-118)||(34879342-34879403)
chr5 (57-128)||(6035475-6035545)
chr5 (65-127)||(6471886-6471948)
chr5 (47-121)||(11685921-11685995)
chr5 (62-128)||(18592070-18592136)
chr5 (59-109)||(27932229-27932279)
chr5 (39-109)||(31084297-31084367)
chr5 (68-121)||(17593725-17593778)
chr5 (57-117)||(12927646-12927706)
chr5 (57-121)||(15410451-15410515)
chr5 (57-128)||(6401490-6401561)
chr5 (57-128)||(21522742-21522813)
chr5 (57-128)||(21533308-21533379)
chr5 (57-120)||(30098318-30098381)
chr5 (42-121)||(30099041-30099120)
chr5 (57-112)||(35017029-35017084)
chr5 (65-120)||(39758272-39758327)
chr5 (65-128)||(41091253-41091316)
chr5 (57-110)||(38816708-38816762)
chr5 (56-121)||(42029743-42029808)
chr5 (57-109)||(6247614-6247666)
chr5 (57-109)||(6326312-6326364)
chr5 (57-109)||(14674261-14674313)
chr5 (77-121)||(17925175-17925219)
chr5 (60-128)||(19579696-19579764)
chr5 (57-109)||(21191071-21191123)
chr5 (57-109)||(22299496-22299547)
chr5 (51-99)||(26716130-26716178)
chr5 (51-99)||(26985870-26985918)
chr5 (57-109)||(33178017-33178069)
chr5 (57-109)||(39698533-39698585)
[»] chr2 (39 HSPs)
chr2 (57-112)||(21616754-21616809)
chr2 (57-121)||(23718018-23718082)
chr2 (57-121)||(24105690-24105754)
chr2 (57-117)||(31808069-31808129)
chr2 (57-111)||(19573970-19574024)
chr2 (57-115)||(41942097-41942155)
chr2 (65-127)||(44860320-44860382)
chr2 (57-110)||(21782832-21782885)
chr2 (57-118)||(37411250-37411311)
chr2 (60-112)||(28677904-28677956)
chr2 (48-128)||(36096371-36096451)
chr2 (57-112)||(2423861-2423916)
chr2 (62-121)||(18276518-18276577)
chr2 (57-110)||(16069268-16069321)
chr2 (57-102)||(24894381-24894426)
chr2 (56-121)||(42832279-42832344)
chr2 (57-121)||(20242730-20242794)
chr2 (57-109)||(21091715-21091767)
chr2 (57-121)||(31018582-31018646)
chr2 (63-110)||(1327976-1328023)
chr2 (57-112)||(15909644-15909699)
chr2 (79-118)||(35973949-35973988)
chr2 (47-121)||(18889594-18889667)
chr2 (39-109)||(38117174-38117244)
chr2 (72-121)||(5367199-5367248)
chr2 (17-109)||(21374714-21374807)
chr2 (17-94)||(26769463-26769540)
chr2 (68-121)||(31026698-31026751)
chr2 (83-128)||(34784978-34785023)
chr2 (58-111)||(35447900-35447953)
chr2 (57-121)||(18420437-18420501)
chr2 (72-128)||(18622613-18622669)
chr2 (64-128)||(24975321-24975385)
chr2 (57-108)||(27460018-27460070)
chr2 (58-118)||(28524419-28524479)
chr2 (65-129)||(29970544-29970608)
chr2 (57-109)||(30404865-30404917)
chr2 (58-110)||(31284041-31284093)
chr2 (57-121)||(41843433-41843497)
[»] scaffold0110 (1 HSPs)
scaffold0110 (58-121)||(28843-28906)
[»] scaffold0020 (1 HSPs)
scaffold0020 (58-128)||(135308-135378)
[»] scaffold0122 (1 HSPs)
scaffold0122 (57-129)||(8658-8730)
[»] scaffold0039 (1 HSPs)
scaffold0039 (57-121)||(84976-85040)
[»] scaffold0004 (1 HSPs)
scaffold0004 (57-109)||(92799-92851)
[»] scaffold0697 (1 HSPs)
scaffold0697 (51-121)||(1630-1700)
[»] scaffold0223 (1 HSPs)
scaffold0223 (57-109)||(20164-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (57-109)||(51803-51855)
[»] scaffold0027 (1 HSPs)
scaffold0027 (57-121)||(46674-46738)
[»] scaffold0022 (2 HSPs)
scaffold0022 (44-128)||(99872-99956)
scaffold0022 (77-118)||(90855-90896)
[»] scaffold0171 (1 HSPs)
scaffold0171 (57-128)||(23412-23483)
[»] scaffold0066 (1 HSPs)
scaffold0066 (39-109)||(33378-33446)
[»] scaffold0306 (1 HSPs)
scaffold0306 (57-102)||(13392-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (57-102)||(21890-21935)
[»] scaffold1528 (1 HSPs)
scaffold1528 (57-117)||(1027-1087)
[»] scaffold0361 (1 HSPs)
scaffold0361 (57-109)||(14522-14574)
[»] scaffold0018 (1 HSPs)
scaffold0018 (57-109)||(192264-192316)


Alignment Details
Target: scaffold0045 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 467
Target Start/End: Complemental strand, 40091 - 39879
Alignment:
Q  261 taccctcaacttttttaacacaagtggatacttggctagaaggtaaatagcccacatggatacaagggaagtagaagtatatccaccaaccaatagagag 360  Q
    |||||| | ||||||||  |||| ||||||||| || ||||||||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||    
T  40091 taccctaagcttttttagaacaattggatacttagcaagaaggtaaatagcccacatggatgaaagggaagtagacatatatccaccaatcactagagag 39992  T
Q  361 acaatgttgtctacaacttctttgtcactcaatttgtca---tcaccatcttcattatgcatcaacccatccattagatcaaatg---tttccaccttat 454  Q
    ||||||||||||||||||||||||||||||||||| |||   |||||||||||| | ||||||||||||||||||||||||  ||   ||| ||||||||    
T  39991 acaatgttgtctacaacttctttgtcactcaatttatcaccttcaccatcttcaatttgcatcaacccatccattagatcacttgtacttttcaccttat 39892  T
Q  455 tttcattctttct 467  Q
    |||||||||||||    
T  39891 tttcattctttct 39879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 259 - 467
Target Start/End: Complemental strand, 25496 - 25285
Alignment:
Q  259 attaccctcaacttttttaacacaagtggatacttggctagaaggtaaatagcccacatggatacaagggaagtagaagtatatccaccaaccaatagag 358  Q
    |||||||| | |||||||| ||||| ||||||||| || |||||||| ||||||||  | ||| |||||||||| ||  |||||||| || | | |||||    
T  25496 attaccctaagcttttttagcacaattggatacttagcaagaaggtatatagcccaagtagatgcaagggaagttgatatatatccagcagctactagag 25397  T
Q  359 agacaatgttgtctacaacttctttgtcactcaatttgt---catcaccatcttcattatgcatcaacccatccattagatcaaatgtttccaccttatt 455  Q
    |||||||||||||||||||||||||||||||||||||||   ||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||     
T  25396 agacaatgttgtctacaacttctttgtcactcaatttgtcaccatcatcatcttcaatttgcatcaacccatccattagatcaattgtttccaccttatc 25297  T
Q  456 ttcattctttct 467  Q
    || |||||||||    
T  25296 tttattctttct 25285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 459
Target Start/End: Complemental strand, 32704 - 32503
Alignment:
Q  261 taccctcaacttttttaacacaagtggatacttggctagaaggtaaatagcccacatggatacaagggaagtagaagtatatccaccaaccaatagagag 360  Q
    ||||||||| ||| ||| ||||| ||||||||| || |||||||||||||||||  | ||| ||||||||||||   |||||||| || ||| |||||||    
T  32704 taccctcaattttgttagcacaattggatacttagcaagaaggtaaatagcccaagttgatgcaagggaagtagggatatatccagcagccactagagag 32605  T
Q  361 acaatgttgtctacaacttctttgtcactcaatttgtca---tcaccatcttcattatgcatcaacccatccattagatcaaatgtttccaccttatttt 457  Q
    ||||||||||||||||||||||||||||||||||| |||   |||||||||||| | ||||||||||||||||||||||||  |||||| ||||||||||    
T  32604 acaatgttgtctacaacttctttgtcactcaatttatcaccttcaccatcttcaatttgcatcaacccatccattagatcacttgtttcaaccttatttt 32505  T
Q  458 ca 459  Q
    ||    
T  32504 ca 32503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 271 - 467
Target Start/End: Original strand, 4740 - 4939
Alignment:
Q  271 ttttttaacacaagtggatacttggctagaaggtaaatagcccacatggatacaagggaagtagaagtatatccaccaaccaatagagagacaatgttgt 370  Q
    ||||||| ||||| ||||||||| || |||||||| ||||||||  | ||| |||||||||| ||   ||||||| || | | |||||||||||||||||    
T  4740 ttttttagcacaattggatacttagcaagaaggtatatagcccaagtagatgcaagggaagttgatagatatccagcagctactagagagacaatgttgt 4839  T
Q  371 ctacaacttctttgtcactcaatttgt---catcaccatcttcattatgcatcaacccatccattagatcaaatgtttccaccttattttcattctttct 467  Q
    |||||||||||||||||||||||||||   ||||| |||||||| | ||||||||||||||||||||||||| |||||||||||||| || ||| |||||    
T  4840 ctacaacttctttgtcactcaatttgtcaccatcatcatcttcaatttgcatcaacccatccattagatcaattgtttccaccttatctttattttttct 4939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 4786445 - 4786341
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| ||||||||  ||||  ||||||||||||||||  ||||||||||||||  ||| |||||||||||||||||||||||||| ||||||||| |||    
T  4786445 atgaagcacggatacagacactgacaccgaacacgacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgt 4786346  T
Q  117 cggtg 121  Q
    |||||    
T  4786345 cggtg 4786341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 39954346 - 39954277
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtg 126  Q
    ||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||| || ||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtgccgtg 39954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 34897071 - 34897138
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    |||| ||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 13844673 - 13844599
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||  ||||||||||||| ||||| ||||| |||||||||||||||| ||| ||||||||| ||||||||    
T  13844673 acacgacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtg 13844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 24362269 - 24362209
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||| ||||    
T  24362269 gacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 31236644 - 31236580
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||| | ||||||||| ||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 27213538 - 27213601
Alignment:
Q  56 agacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcgg 119  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| | ||||||||| ||||||    
T  27213538 agacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 7658449 - 7658519
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| || ||||||||||| |||| ||||| ||||||| |||||||||||| ||||||||| ||||||||    
T  7658449 gacatcgatacgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtg 7658519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 4611532 - 4611597
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| ||||| ||||||| |||||||||||| ||||||||| | ||||||| |||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtc 4611597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 14134706 - 14134755
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtg 14134755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 14634206 - 14634137
Alignment:
Q  59 cacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| |||||||||||| ||||||||||||| | |||||||||| ||||||||| ||| |||| ||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattatatttgttggtgtcgtgtc 14634137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 11927150 - 11927083
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||| | ||| ||||| | |||||||||||||||||| ||||||||| |||||||| |||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 22651968 - 22652039
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||| |||||||| |  |||||||| ||||||    
T  22651968 gacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtc 22652039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 18407701 - 18407763
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||| ||||| |||||||| ||||| |||| || |||||||||||||||||| ||||||    
T  18407701 acacgacacagacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaatta 18407763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 22595968 - 22596038
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||| |||| |||  ||||||||||||| ||||| ||||||| ||||| |||||||||||| ||||||    
T  22595968 gacaccggacacaacactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 25192414 - 25192348
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgcc 123  Q
    ||||||||||||| ||||| ||||| | ||| | |||||||||||||||||||||  ||||||||||    
T  25192414 gacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtgcc 25192348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 11944658 - 11944727
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||||| | ||| ||||| | |||||||||||| ||||| ||||||||| |||||||| |||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 20785572 - 20785467
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| |||||||| |||||  ||||||| ||||||||  || | ||| |||||||||| ||||| || ||||||||||||| | | ||||||||| |||    
T  20785572 atgaagcacggatacggacacggacaccgtacacgacacggatatgccaacaccgctaataatttgaggaaatcacataatttaatgtaattatatgtgt 20785473  T
Q  117 cggtgc 122  Q
    | ||||    
T  20785472 ctgtgc 20785467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 29776022 - 29776083
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||| |||| | |||||| ||||| ||||| |||||||||| |||||||||||||||||||    
T  29776022 gacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattatat 29776083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 11803271 - 11803315
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||    
T  11803271 aatttaagaaaatcacataattcagtgtaattatatgtgttggtg 11803315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 12570793 - 12570737
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||| |||||||||||| | ||||||| ||| ||||||||||||| ||||    
T  12570793 gacaccgctaataatttaagaaaaacgcataattaagtgtaattatatatgttggtg 12570737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 29510371 - 29510319
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | ||||||||| |||||||||||||||    
T  29510371 gacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatta 29510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 27101501 - 27101548
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataatt 98  Q
    ||||| ||||||||||||||||||| ||||| | ||||||||||||||    
T  27101501 gacattgacacgccgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 33382077 - 33382022
Alignment:
Q  66 acaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||| ||| ||||||||||||| |||||||||||  ||||||||| ||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtg 33382022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 15816196 - 15816126
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||||||  |||| ||||| | |||||||||||||| ||| ||||||||  |||||||| |||||    
T  15816196 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 22493492 - 22493550
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| || | ||||| | |||||||||||||||||| |||| |||||||||||||    
T  22493492 ccgacaccactgataattttaaaaaatcacataattcagtgtaatcatatatgtcggtg 22493550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 26902216 - 26902178
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtg 26902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 34222952 - 34223002
Alignment:
Q  70 cgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||| ||||||| |||||||||||||| ||| ||||||||| |||||||    
T  34222952 cgctaataatttaataaaatcacataattaagtgtaattatatgtgtcggt 34223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 38278241 - 38278188
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    |||||||| ||| |||||| |||||||||||||||||||||| | ||||||||||    
T  38278241 gacacgcc-acatcgctaataatttaagaaaatcacataatttaatataattata 38278188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 12570567 - 12570514
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||| ||||| |||||||||||| ||||||||| ||| ||||||||| |||||    
T  12570567 gacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcg 12570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 18067993 - 18067956
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagt 18067956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20679455 - 20679398
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| |||| ||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  20679455 cgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtg 20679398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 41838190 - 41838145
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    |||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  41838190 gacacgtcgacacagctaataatttaaaaaaatcacataattcagt 41838145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 3025557 - 3025597
Alignment:
Q  71 gctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||| ||||| |||||||||||||||||||| ||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 12985404 - 12985448
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| |||||||||||||||||| | |||| |||||||||||||    
T  12985404 aatttgagaaaatcacataattcaatgtaatcatatatgtcggtg 12985448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 25566802 - 25566903
Alignment:
Q  24 acggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgcc 123  Q
    |||||||  |||| |||||||| ||| |||| ||||||   ||||| ||||| ||||| | |||||||||||||||||| |||||| |  |||||||| |    
T  25566802 acggatatagacacagacaccggacatgacacagacact--gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 25566899  T
Q  124 gtgt 127  Q
    ||||    
T  25566900 gtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 31109585 - 31109525
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||||||||||||| ||| ||||| ||||||||| | |||||||| ||| ||||| ||||    
T  31109585 gacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtc 31109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 7377931 - 7378035
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| |||||||| ||||  |||||||| |||| ||| |||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||| |||    
T  7377931 atgaagcacggatacggacccagacaccggacacaacacagacaccccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgt 7378030  T
Q  117 cggtg 121  Q
    |||||    
T  7378031 cggtg 7378035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 8931682 - 8931598
Alignment:
Q  44 cgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||| || ||||||    
T  8931682 cgaacacgacagaaacacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtc 8931598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 9658871 - 9658935
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  9658871 gacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtg 9658935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 26562681 - 26562752
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||| || ||||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 26562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 20371218 - 20371113
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacg-acatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatg 115  Q
    ||||| |||||||| ||||| ||| |||| ||||| |||| ||||||||||||||||||| ||||| |||||||||||||| ||| | | ||||||| ||    
T  20371218 atgaagcacggatacggacacagaaaccggacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtg 20371119  T
Q  116 tcggtg 121  Q
    ||||||    
T  20371118 tcggtg 20371113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 7265660 - 7265596
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  7265660 gacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtg 7265596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 19040344 - 19040404
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 9027170 - 9027241
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||| || ||||||||| |||||||| ||||||    
T  9027170 gacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 4040464 - 4040520
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcgg 119  Q
    |||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  4040464 ccgacaccactaataatttaagaaaatcgcattattcagtataattatatatgtcgg 4040520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 9629375 - 9629439
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||| || ||||| |||||||||||||||||| | ||||||||| ||||||||    
T  9629375 gacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 9629439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 9025553 - 9025490
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||||||| |||||||| ||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 32511725 - 32511679
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 16488675 - 16488586
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||| | ||||||| ||||||||||||| |||||   ||| ||||||||||| ||| |||| ||||||||| |||||||| ||||||    
T  16488675 gacaccggaaacgacatggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtc 16488586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 5000693 - 5000633
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    |||||| |||||||||||| ||||  |||||||||||| ||||||||||||| ||||||||    
T  5000693 gacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtc 5000633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 5732577 - 5732513
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||| ||| ||||| ||||||||||||| || ||| ||||||||| ||||||||    
T  5732577 gacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtg 5732513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 10339193 - 10339121
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt-ataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||||| |  ||||| ||||||||||||||||||||  ||||||||| |||| ||||||||||    
T  10339193 gacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtc 10339121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 24115953 - 24115850
Alignment:
Q  24 acggataaggacagagacaccgaacacgacatag------acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    |||||||  |||| ||||||||||||||||||||      |||||| |||||  |||| ||||| | |||||||||||||||| |||||||||||||||     
T  24115953 acggatacagacacagacaccgaacacgacataggcactgacacgctgacacaactaataatttcaaaaaatcacataattcaatataattatatatgtt 24115854  T
Q  118 ggtg 121  Q
    ||||    
T  24115853 ggtg 24115850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 16766689 - 16766760
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||| |||||| |  |||||||| ||||||    
T  16766689 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 14796237 - 14796187
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||||||||||||||||||   ||||||||||||||||| |||||    
T  14796237 aatttaagaaaatcacataattcagcgcaattatatatgtcggtgtcgtgt 14796187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 17341731 - 17341677
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||||||||| ||| ||||| | |||||||||||||||||| ||||||||    
T  17341731 gacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 30866211 - 30866149
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcgg 119  Q
    ||||| || |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||||    
T  30866211 gacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 10842524 - 10842585
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||||||||||||||||| ||||| | |||||||||||||| ||| |||| |||| |||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 13360440 - 13360375
Alignment:
Q  56 agacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| ||||||| |||  ||||| |||||||||||||||||||| ||||||||| | ||||||    
T  13360440 agacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtg 13360375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 13851728 - 13851789
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    |||||| |||||||||||| ||||| ||||||| || ||||||||| ||||||||| |||||    
T  13851728 gacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 7086787 - 7086851
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||| || ||| ||||| ||||| |||||||||||||||| ||| ||||||||| ||||||||    
T  7086787 gacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtg 7086851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 12686471 - 12686408
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||| || || ||||||| ||||| |||||||||||||||||| ||||||| ||||||||    
T  12686471 acacgacattgatacaccgacactgctaataatttaagaaaatcacat-attcagtgtaattata 12686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 18367783 - 18367899
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagaca-----cgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||| |||||||| |||||  ||||||| ||||||||| ||||     ||||||||| |||||   ||| ||||||||||| ||| |||| ||||||||    
T  18367783 atgaagcacggatacggacacggacaccggacacgacatggacacgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattata 18367882  T
Q  112 tatgtcggtgccgtgtc 128  Q
    | |||||||| ||||||    
T  18367883 tgtgtcggtgtcgtgtc 18367899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 19044456 - 19044520
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||  |||| ||||| |||| ||||||||||||||| | ||||||| ||||||||    
T  19044456 gacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtg 19044520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 33001356 - 33001292
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| ||||| ||||| | |||||||||||||| | | ||||||||| ||||||||    
T  33001356 gacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtg 33001292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 34172185 - 34172249
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||||||| |||| ||||| |||||||||||||||| | || |||||||| ||||||||    
T  34172185 gacatgccgacacctctaacaatttgagaaaatcacataattaattaaaattatatgtgtcggtg 34172249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 5462686 - 5462737
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||||| ||| ||||| |||||||||||||||||| | |||||||||||||    
T  5462686 gacaccgttaataatttgagaaaatcacataattcattgtaattatatatgt 5462737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 5970215 - 5970104
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| ||| |||| |||||  ||||||| ||| ||||  |||||| |||||| | ||| ||||| | |||||||||||||||||| |||||| | ||||    
T  5970215 atgaagcacagatacggacacggacaccggacatgacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgt 5970116  T
Q  117 cggtgccgtgtc 128  Q
     |||| ||||||    
T  5970115 gggtgtcgtgtc 5970104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 112
Target Start/End: Complemental strand, 17411915 - 17411880
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatat 112  Q
    ||||||||||||||| ||||||||||||||||||||    
T  17411915 aatttaagaaaatcatataattcagtataattatat 17411880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 18252833 - 18252766
Alignment:
Q  42 accgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| |||||| |||| |||| ||| ||||||| ||||| |||||||| ||| ||||||    
T  18252833 accgaacacgacacagacactccgataccgataataatttaaaaaaatgacataatttagtgtaatta 18252766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 34073414 - 34073343
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| ||| ||| |||||| ||||| |||||||| ||||||||||| |||||||||  ||||||| ||||||    
T  34073414 gacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 7027236 - 7027298
Alignment:
Q  60 acgccgacaccgctaaaaattt-aagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||| || | ||||| || |||||||||||||||||| ||||||||| ||||||||    
T  7027236 acgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtg 7027298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 8713953 - 8714043
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaattt-aagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||| ||| ||||| |||||| |||||| | ||| ||||| || |||||||||||||||||| |||||| | |||| |||| ||||||    
T  8713953 gacaccggacatgacatggacacgtcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtc 8714043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 9107436 - 9107366
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| ||||| ||||| | ||||||||| |||||||| |||||| |  |||||||| ||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 24833311 - 24833245
Alignment:
Q  46 aacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||||  |||||||||||||  |||| || ||||||||||| ||||||| ||| |||||||||    
T  24833311 aacacgacactgacacgccgacactactaataagttaagaaaatcgcataatttagtgtaattatat 24833245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 25096415 - 25096477
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcgg 119  Q
    |||||| ||||||| |||| ||||| |||||||||||||||  ||| |||||| |||||||||    
T  25096415 gacacgacgacaccactaataatttgagaaaatcacataatctagtgtaattacatatgtcgg 25096477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 30851597 - 30851656
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||| ||||| ||||||||||||||||  |||||| | ||||||||| ||||||||    
T  30851597 acgccgacactgctaataatttaagaaaatcac--aattcaatgtaattatatgtgtcggtg 30851656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 6665182 - 6665268
Alignment:
Q  38 agacaccgaacacgacatagac----acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||||||||||||||  |||    ||||||| |||||||| ||||| || ||||||||||||||||  ||||||| | |||||||    
T  6665182 agacaccgaacacgacacggacacatacgccgaaaccgctaataatttgagtaaatcacataattcagagtaattatttgtgtcggt 6665268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 9617437 - 9617490
Alignment:
Q  68 accgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||| ||||| |||||||||||||||||| | ||||||||| ||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 9617490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||| |||||||||||||||||||| ||||||||| |||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 25207759 - 25207808
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||||| ||||| ||||| | || ||||||||||||||||    
T  25207759 acgccgacaccgctaataatttgagaaagttacgtaattcagtataatta 25207808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 3209363 - 3209415
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaattt-aagaaaatcacataatt 98  Q
    |||||||| |||||||||||||| ||||| ||||| || ||||||||||||||    
T  3209363 acacgacacagacacgccgacacagctaataatttgaaaaaaatcacataatt 3209415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 7938108 - 7938172
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| ||||| ||||| | ||||||| |||||| ||| ||||||||  ||||||||    
T  7938108 gacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtg 7938172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 7977897 - 7977845
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | ||||| |||||||||||| ||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 7977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 11784263 - 11784219
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| |||||||||||| | ||||| ||||||||||||||||||    
T  11784263 aatttgagaaaatcacatgaatcagtgtaattatatatgtcggtg 11784219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 12696316 - 12696368
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | ||||| |||||||||||| ||||||    
T  12696316 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 14721253 - 14721297
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| |||||||||| ||||||||||| ||| ||||    
T  14721253 aatttaagaaaattacataattcactataattatatgtgttggtg 14721297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 15443707 - 15443751
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  15443707 aatttgagaaaataacataattcaatataattatatatgttggtg 15443751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 17841656 - 17841604
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||| ||| ||||||    
T  17841656 gacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 31579283 - 31579239
Alignment:
Q  66 acaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    |||||| ||| ||||| |||||||||||||||||||| |||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 32298674 - 32298610
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||| |||||||||| |||||||||  ||||||||||| ||| ||||||||| ||| ||||    
T  32298674 gacatgccaacaccgctaataatttaagatcatcacataatttagtgtaattatatgtgttggtg 32298610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 34595126 - 34595178
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||  |||| ||||| | |||||||||||||||||| ||||||    
T  34595126 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 29163458 - 29163384
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||    
T  29163458 acacaacacagacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtg 29163384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 2784554 - 2784612
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  2784554 ccgacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggtg 2784612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10475084 - 10474999
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    ||||| |||||||| | |||  ||||||| ||||||||| ||||||||||||||||||| || || ||||||||||||||||||||    
T  10475084 atgaagcacggatatgaacacggacaccggacacgacattgacacgccgacaccgctaataacttgagaaaatcacataattcagt 10474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 17831638 - 17831537
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| ||||||||  |||| |||||||| | ||||||  ||||||||||||||||||| ||||| |||||||||||| ||||||| |||| |||| |||    
T  17831638 atgaagcacggatacagacacagacaccggatacgacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgt 17831539  T
Q  117 cg 118  Q
    ||    
T  17831538 cg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 2896188 - 2896124
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||  ||||||||||||||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtg 2896124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 36878453 - 36878517
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||  ||||||||    
T  36878453 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtg 36878517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 5376566 - 5376496
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||| |  |||||||| ||||||    
T  5376566 acacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtc 5376496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 13997875 - 13997939
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||| |||  |||||| |||||||||||||||||| ||||||||| ||||||||    
T  13997875 gacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtg 13997939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 6427342 - 6427413
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||| |||| ||||||    
T  6427342 gacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 9828036 - 9828107
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||| |||| ||||| | |||||||||||||||||| ||||| ||| |||||||| ||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtc 9828107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 13436451 - 13436514
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||| ||| ||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtg 13436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 34257977 - 34257914
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| ||| |||||||||||||||||    
T  34257977 gacacgtcgacaccgttaataatttaataaaatcacataatttagtgtaattatatatgtcggt 34257914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 398832 - 398778
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||| ||||||||    
T  398832 gacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 23636122 - 23636052
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| |||||||||| ||||| |||||||| ||||||| |||||||||||| ||||| ||| ||||||||    
T  23636122 gacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaattgtatgtgtcggtg 23636052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 25098632 - 25098567
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||||||  |||| |||||||||||| | ||||| |||||||||||||||||||| |||||||||    
T  25098632 acacgacaaggacaagccgacaccgctgataatttgagaaaatcacataattcagtgtaattatat 25098567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 39953210 - 39953149
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| ||||| ||| ||||||||    
T  39953210 acgccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtg 39953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 1262876 - 1262928
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||    
T  1262876 gacacgccgacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 3490497 - 3490405
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| |||||||| ||| | |||||||| ||||||||  ||||||||||||| ||||| ||||| ||||||  |||| ||||||| ||||||    
T  3490497 atgaagcacggatacggatacagacaccggacacgacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaatta 3490405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 10572656 - 10572592
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| |||| ||||| ||||||||||||||||| || |||||| || ||||||||    
T  10572656 gacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtg 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 20157410 - 20157346
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| ||| | |||||||||||||||||||| |||| |||| |||||||| ||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 25361881 - 25361949
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||| || | ||||| |||||||||||||||||||| ||||||||| |||| ||| ||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 25361949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 28674792 - 28674856
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||  |||||| ||| ||||| ||||||| |||||||||||||||||||||||||| ||||    
T  28674792 gacacgctaacaccgttaataatttgagaaaattacataattcagtataattatatatgttggtg 28674856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 609525 - 609462
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||||||||||| |||| ||||| ||||||| ||||||||||  ||||| ||||||||||||    
T  609525 gacacgccgacaccactaataatttgagaaaattacataattcaacataatcatatatgtcggt 609462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 1486776 - 1486705
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||| ||||| ||||| ||||| | |||||||||||||||||| ||||||||  |||||||| ||||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 1486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 7918278 - 7918207
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||| |||| | |||| ||||| |||||||||||||||||||| ||||||||| |||| ||| ||||||    
T  7918278 gacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 12443527 - 12443476
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatt 108  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||| |||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 38503313 - 38503376
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||||||||||| ||||| ||||||||| ||| |||||| ||||||||| ||||||||    
T  38503313 acacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtg 38503376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 44482242 - 44482293
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||| ||||||    
T  44482242 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 44482293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 48148097 - 48148034
Alignment:
Q  65 gacaccgctaaaaattt-aagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    ||||||||||| ||||| || ||||||| |||||||||| |||||||||||||||||| |||||    
T  48148097 gacaccgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 1864941 - 1864883
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| | ||| ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtg 1864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 21530675 - 21530745
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| |||||||||||||||| ||| ||||| ||||||||| ||||||  |||||||||||  ||||||||    
T  21530675 gacacagacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtg 21530745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 34298428 - 34298482
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||||| ||||||||    
T  34298428 gacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 34371714 - 34371775
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    ||||||||||| |||| | ||||||||||||||||||| ||||||||| |||||||| |||||    
T  34371714 gacaccgctaataattga-gaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 5898330 - 5898269
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||| ||| | | |||||||||||||||||| |||||||||  |||||||    
T  5898330 acgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtg 5898269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 6415109 - 6415004
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacg-acatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatg 115  Q
    ||||| |||||||| |||||   |||||| ||||| |||  |||||||||||| ||||||  |||| ||||||||||||||| |||| |||||| || ||    
T  6415109 atgaagcacggatacggacacgaacaccggacacggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtg 6415010  T
Q  116 tcggtg 121  Q
    ||||||    
T  6415009 tcggtg 6415004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 15641097 - 15641040
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatat 114  Q
    |||| |||||||| ||||| |||||||||||||||||| ||||||| ||| |||||||    
T  15641097 gacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaactatatat 15641040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 24577271 - 24577182
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||| ||||||||||  ||||||| |||||  |||| ||||| | |||||||||||||||||| |||||| |  |||||||| ||||||    
T  24577271 gacactgaacacgacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 113291 - 113343
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  113291 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 9709812 - 9709876
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||| |||||||||| ||||| |||||||||||||||||  | ||||||||| ||||||||    
T  9709812 gacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtg 9709876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 19562688 - 19562624
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| ||||| ||||| |||||||| |||| |||||| ||||||||| ||| ||||    
T  19562688 gacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtg 19562624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 22881723 - 22881631
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| ||||||||  ||||  ||||||| ||||||||  |||||||||||||  |||| ||||| | |||||||||||||| ||| ||||||    
T  22881723 atgaagcacggatatagacacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 23714768 - 23714708
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||||||||||||||||||  ||||||| |||||||| ||| ||||||||  |||||||    
T  23714768 acgccgacaccgctaaaaattagagaaaattacataattaagtgtaattatacgtgtcggt 23714708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 40181871 - 40181927
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||||||| | ||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtg 40181927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 10233230 - 10233305
Alignment:
Q  42 accgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    |||| ||||||| | ||||| || ||||| |||| || || |||||||||||||||||||| ||||||||| ||||    
T  10233230 accggacacgacttggacacaccaacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 12993191 - 12993250
Alignment:
Q  62 gccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| |||||| | |||| || ||||||| | ||||||||||||||||||    
T  12993191 gccgacaccgctaataatttacgtaaattacgtaattcaatgtaattatatatgtcggtg 12993250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 21057757 - 21057816
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataatt 98  Q
    ||||||||||||| ||  |||||| |||||||||||| ||||| ||||||| ||||||||    
T  21057757 gacaccgaacacggcactgacacgtcgacaccgctaataattttagaaaataacataatt 21057816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 5944273 - 5944346
Alignment:
Q  57 gacacgccgacaccgctaaaaattt--aagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||| ||| ||||| |||||  || |||||||||||||||||| ||||||||  |||||||| ||||||    
T  5944273 gacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 5944346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 30749858 - 30749896
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtg 30749896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 30771309 - 30771347
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtg 30771347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 38076047 - 38075973
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||  |||||| |||||| ||||| ||||| || ||||||||||| ||||| |||| |||| ||||||||    
T  38076047 acacgacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtg 38075973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 38078769 - 38078676
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacga-catagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| |||||||| |||||  ||||||| |||||| ||  |||||| |||||| ||||| ||||| | |||||||||||||||| | ||||||    
T  38078769 atgaagcacggatacggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 41877534 - 41877485
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||||| ||||| ||||||| |||||||| ||| ||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 9629960 - 9629896
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| ||||| | ||||||| |||||||||| | ||||||  |||||||| ||||||    
T  9629960 cgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtc 9629896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 12713379 - 12713339
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||| |||||||||||||||||||||| ||| |||||||||    
T  12713379 ctaataatttaagaaaatcacataatttagtgtaattatat 12713339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 12717470 - 12717430
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||| |||||||||||||||||||||| ||| |||||||||    
T  12717470 ctaataatttaagaaaatcacataatttagtgtaattatat 12717430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 14332709 - 14332645
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||| ||||| |||| ||||| |||||||||||||||| ||| ||||||||| | ||||||    
T  14332709 gacatgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtg 14332645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 17754303 - 17754363
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||| ||||||||||||| ||||| | ||||| |||||||||||| ||| ||||| ||||    
T  17754303 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 17754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 19058923 - 19058871
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||||| || || |||||||||||| ||||||    
T  19058923 gacacgccgacacagctaataatttaaaaagataacataattcagtgtaatta 19058871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 19324561 - 19324609
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||| ||| | ||||| |||||||||||||||||||| |||||||||    
T  19324561 cgacactgctgataatttgagaaaatcacataattcagtgtaattatat 19324609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 21038086 - 21038130
Alignment:
Q  68 accgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||| ||||||||||||| |||||||||||| |||| ||||    
T  21038086 accgctaataatttaagaaaattacataattcagtgtaatcatat 21038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 26238173 - 26238129
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataat 107  Q
    ||||||||||||| ||||| ||||||| |||||||||||| ||||    
T  26238173 ccgacaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 27471633 - 27471581
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| |||| |||||||| ||||| |||||| ||||||||||||| ||||||    
T  27471633 gacacaccgataccgctaataatttgagaaaagcacataattcagtgtaatta 27471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 31015039 - 31015087
Alignment:
Q  61 cgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||| |||| ||||| ||||| |||||||||||||||||||| ||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 35999374 - 35999334
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||| ||||||||||||||| |||||| |||||||||||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatat 35999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 43492561 - 43492497
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| |||  ||||| |||||||||| |||||| || ||||||| | ||||||||    
T  43492561 gacacgccgacaccactagtaatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtg 43492497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 19206043 - 19206106
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtg 19206106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 22484017 - 22484081
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||| ||||||||    
T  22484017 gacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtg 22484081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 32308112 - 32308183
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| |||| ||| ||||||    
T  32308112 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtc 32308183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 5235978 - 5236050
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtct 129  Q
    |||||| |||||||||||| ||||||||||||| | |||||| ||| ||||||||||| |||||| |||||||    
T  5235978 gacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatatatatcggtgtcgtgtct 5236050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 20549783 - 20549847
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||||||||||| ||||| |||||||||| ||||||||| ||||||||| ||||||||    
T  20549783 gacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtg 20549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 29787435 - 29787383
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 22602777 - 22602706
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||||  ||  |||| |||||||||||||||||||| ||||||||| |||||||| ||||||    
T  22602777 gacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 22602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 27093474 - 27093416
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||  |||||||    
T  27093474 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtg 27093416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 27184827 - 27184885
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||  |||||||    
T  27184827 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtg 27184885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 1433440 - 1433517
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||| ||||||||||||||| ||| ||||| |||||||||||| |||  || ||||||||| |||||||| ||||||    
T  1433440 gacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtc 1433517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 24339628 - 24339705
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||| ||||||||||||| ||||| ||||| | |||||||||||||||||| |||||| |  |||||||| ||||||    
T  24339628 gacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 2948675 - 2948739
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||||| | ||||| |||||||||| ||||| ||| ||||||||| ||||||||    
T  2948675 gacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 11722165 - 11722121
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcag 101  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  11722165 gacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 22868034 - 22868094
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    |||||||||||||| |||| ||| | |||||||||||||||||||| ||||||||| ||||    
T  22868034 gacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 23849505 - 23849461
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||    
T  23849505 aatttaagaaaaacacataattcagtataattatatgtgtcggtg 23849461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 26733296 - 26733360
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||| |||||||||||| ||||| | |||||||||||||||||| |||||| || ||||||||    
T  26733296 gacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtg 26733360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 27945033 - 27945104
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||| |||| ||||| ||||||| |||||||||||| |||||| |  |||||||| ||||||    
T  27945033 gacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 3554583 - 3554509
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| |||||||||||||||  | | ||||||||||||| |||||||| | | |||||||| |||||||||    
T  3554583 acacgacacagacacgccgacaccaatgataatttaagaaaattacataatttaatgtaattatagatgtcggtg 3554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 3721099 - 3721149
Alignment:
Q  71 gctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtg 3721149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 5548673 - 5548739
Alignment:
Q  62 gccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| | ||||| ||||||||| |||||||||| ||||||||| |||| ||| ||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtc 5548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 6630979 - 6630909
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||||||| |||| ||||| ||||| |||| ||||||||| ||||||||| ||||| || |||||    
T  6630979 gacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgt 6630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 24146822 - 24146872
Alignment:
Q  71 gctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||| |||||||||||||||||| ||||||||||| ||||||||    
T  24146822 gctaataattttagaaaatcacataattcaatataattatatgtgtcggtg 24146872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 39138462 - 39138500
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtg 39138500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 5835242 - 5835303
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||| |||| | ||| ||||||| |||||||||||| ||||||||| ||||||||    
T  5835242 acgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtg 5835303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 17851434 - 17851483
Alignment:
Q  68 accgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||| ||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 23191891 - 23191940
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||||| ||||| ||||||||||||| |||||| ||||||    
T  23191891 acgccgacaccgctaataatttgagaaaatcacatatttcagtgtaatta 23191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 30731031 - 30731080
Alignment:
Q  59 cacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatt 108  Q
    |||||||||||||| || ||||| |||||||||||||||||||| |||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 7758317 - 7758385
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| |||||| |||| ||||| ||||||| | |||||||||||||||||| | |||||||| ||||||    
T  7758317 acgctgacaccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtc 7758385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 9482926 - 9482990
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| |||||| |||| | ||||| ||||||||||| |||||||| ||||||||| ||||||||    
T  9482926 gacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtg 9482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 9778454 - 9778563
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| |||||||| |||||  ||||||| ||||||||  |||||   ||||| ||| | ||||| | ||||||||||||||||||||||||| |  |||    
T  9778454 atgaagcacggatacggacacggacaccggacacgacacggacact--gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgt 9778551  T
Q  117 cggtgccgtgtc 128  Q
    ||||| ||||||    
T  9778552 cggtgtcgtgtc 9778563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 21141049 - 21140977
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtct 129  Q
    |||||| ||||||| |||| ||||||||||||||| |||||||||| | ||||||  |||||| | |||||||    
T  21141049 gacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtcggagtcgtgtct 21140977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 25481894 - 25481946
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 8160416 - 8160463
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||||||||| ||||||||||||| |||||||| ||| |||||||||    
T  8160416 gacaccgctaataatttaagaaaattacataatttagtgtaattatat 8160463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 21826266 - 21826329
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||  |||| ||||||| |||||||||||| ||||| |||| |||| ||||||||    
T  21826266 acacgccgacacgactaataatttaaaaaaatcacataactcagtctaataatatgtgtcggtg 21826329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 26329449 - 26329378
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| || ||| ||||| |||||| |||| |||||||| ||||||||| |||||| | ||||||    
T  26329449 gacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtc 26329378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 27732286 - 27732243
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||    
T  27732286 aatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 28155563 - 28155614
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||||||| ||||| ||||||| ||||||||| || ||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaatta 28155614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 35297719 - 35297669
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    ||||| |||||||||||||||||| ||||||||||| ||| |||| |||||    
T  35297719 aatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgt 35297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 49107813 - 49107882
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||| ||| | ||||||| |||||||| |||||    
T  49107813 gacacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtcgtgt 49107882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 12278847 - 12278888
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||||||||||| |||||||||||| ||||||||| |||||    
T  12278847 aatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 13770686 - 13770735
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||| ||||| ||||||| ||||| |||||||||||| ||||||    
T  13770686 acgccgacacagctaataatttaaaaaaattacataattcagtgtaatta 13770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 17307888 - 17307956
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| ||||||   ||| ||||||| |||||||||||| ||||||||| ||| |||| ||||||    
T  17307888 gacacgccgacaacgctaa---tttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtc 17307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 18013126 - 18013069
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtct 129  Q
    |||| ||||||| ||||| |||||||||||| ||||||||| |||| ||| |||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtct 18013069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 29769447 - 29769509
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| |||||||| || ||||||| |||||||  |||||| |||||||||||| ||||||||    
T  29769447 gacacgctgacaccgccaataatttaataaaatca--taattctgtataattatatgtgtcggtg 29769509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 32287523 - 32287466
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||| ||| | ||||||||||||||||||||  || ||||| ||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtg 32287466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q  70 cgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 2425800 - 2425736
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||| ||||| ||| ||||| |||||||||||||||| |||  || ||||| ||||||||    
T  2425800 gacacgccggcaccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcggtg 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 11061143 - 11061091
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| ||||||| ||||| ||||| | |||||||||||||| ||||||||||    
T  11061143 gacacaccgacacagctaataatttgaaaaaatcacataatttagtataatta 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 15680801 - 15680865
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||  ||||| |||| || |||||||||||||| ||| ||||||||  ||||||||    
T  15680801 gacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtg 15680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 15902814 - 15902878
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| |||||||||  ||| ||||| | |||||||||||||| ||| ||||||||| ||||||||    
T  15902814 gacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtg 15902878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 19992001 - 19992057
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||| ||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtg 19992057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 21568689 - 21568625
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| ||||| ||||| |||||||||||||| ||||||| ||| |||| ||||  |||||||    
T  21568689 gacacgctgacacggctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtg 21568625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 24289813 - 24289857
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||||    
T  24289813 acacgccgacaccgccaataatttgagaaaattacataattcagt 24289857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 25822607 - 25822659
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacac 69  Q
    ||||||||||||||  ||||  ||||||| | |||||||||||||||||||||    
T  25822607 atgaaacacggatacagacatggacaccggatacgacatagacacgccgacac 25822659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 36297405 - 36297369
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattca 100  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  36297405 cgacacggctaataatttaagaaaatcacataattca 36297369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 44611 - 44529
Alignment:
Q  38 agacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||||  ||||||||  |||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  44611 agacaccagacacgacagggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 7614476 - 7614418
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7614476 ccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtg 7614418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 5407314 - 5407260
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  5407314 gacacgccgacaccgctaaaaatttgagaaaatcacataattcattgtaattata 5407260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 8383243 - 8383313
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||  ||||||||    
T  8383243 gacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtg 8383313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 1438786 - 1438851
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||||||  ||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||||    
T  1438786 acacgacactgacacaccgacatcgctaacaatttgagaaaatcacataattcagtataattatat 1438851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 18426941 - 18427005
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| |||| ||||| | ||||||||||||||| || ||||||||||||||||||    
T  18426941 gacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtg 18427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 7928448 - 7928506
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| ||||| | |||||||||||||||||| ||||||||| ||||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtg 7928506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 8789635 - 8789553
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| |||| ||| |||||| ||||||| ||| | ||||| ||||||||||||||||| || ||||||||| ||||||||    
T  8789635 gacaccggacacaacacagacacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtg 8789553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 35222920 - 35222994
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| ||||||||||||||  |||| | ||| |||||||||||||||||| | ||||||||| ||||||||    
T  35222920 acacgacacagacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtg 35222994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 4469836 - 4469901
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| |||||||| | ||||| || |||||||||||||||||||||||||| ||| |||||||||    
T  4469836 gacattgacacgccaataccgccaataatttaagaaaatcacataattcagtgtaagtatatatgt 4469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 32429452 - 32429383
Alignment:
Q  52 acatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||| |||||| |||||| ||||||||||||||||||||||||||  ||||||| || ||||||    
T  32429452 acattgacactccgacaacgctaataatttaagaaaatcacataattcagtgcaattataaatatcggtg 32429383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 21479070 - 21479162
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| || ||||| |||||  ||||||| ||||||||  ||||||||||||| ||||| ||||| | ||||||||| |||||||| ||||||    
T  21479070 atgaagcatggatacggacacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 34185207 - 34185119
Alignment:
Q  40 acaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||| ||||||||  ||||||||||||| ||||| ||||| | ||||||||| |||||||| |||||| |  |||||||| ||||||    
T  34185207 acaccggacacgacagtgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtc 34185119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 5441098 - 5441055
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattca 100  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  5441098 gacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 10690321 - 10690266
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    ||||||||||| ||| | |||||||||||||||||||| ||||||||| |||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 12703999 - 12704054
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||||||||| |||| ||||| |||||| ||||||||||||| |||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaattatat 12704054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 40993413 - 40993338
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaa-tcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||  |||||  |||||||||||| ||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  40993413 acacgacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtg 40993338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 28678295 - 28678365
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||| |||||| | ||||| ||||||| |||||||||||||| ||||||||| ||| |||||||| |||||    
T  28678295 gacatgccgacgctgctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgt 28678365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 11493434 - 11493373
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||| |||||| ||||||| |||| ||| | |||||||||||||||||||| |||||||||    
T  11493434 gacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattatat 11493373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 11610513 - 11610558
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  11610513 gacacgccaacaccgctaataatttaaaaaaatcacataattcagt 11610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 14747513 - 14747606
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaattt-aagaaaatcacataattcagtataatta 109  Q
    ||||| |||||||| ||| |  ||||||| ||||||||  ||||||||||||| ||||| ||||| || |||||||||||||| ||| ||||||    
T  14747513 atgaagcacggatacggatacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatta 14747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 34307846 - 34307793
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    |||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 4987358 - 4987306
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  4987358 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 8842322 - 8842385
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| |||||||||||||| |||||  |||||||||||||||  || ||||||||||||||||||    
T  8842322 gacatgccgacaccgctaataatttt-gaaaatcacataatttggtgtaattatatatgtcggtg 8842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 32804607 - 32804547
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    |||| |||||||||| ||| ||||| |||||||||||||||| ||| ||||||||| ||||    
T  32804607 gacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 49505221 - 49505161
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||||| || |||||||| ||||| |||||||||||||||| ||| ||||||||| ||||    
T  49505221 gacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 9800032 - 9800103
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||| |||| ||||| ||||||| ||||||||| || ||||| ||  |||||||| ||||||    
T  9800032 gacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtc 9800103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 13807162 - 13807225
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||| |||| | ||| ||||| |||||||||||||||||| |||||| |||| ||||||||    
T  13807162 acacgccaacactgataacaatttgagaaaatcacataattcaatataataatatgtgtcggtg 13807225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 15544675 - 15544738
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    ||||||||  ||||||  ||||||||||| ||||| | ||||||||||||||| ||||||||||    
T  15544675 acacgacactgacacgttgacaccgctaataatttgataaaatcacataattctgtataattat 15544738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 16192817 - 16192762
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||| ||||||||| ||| ||||| ||||||| |||||||||||| |||||||||    
T  16192817 gacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatat 16192762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 25064895 - 25064954
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    ||||| |||||||||||||||||||  |||| | |||||||||||||| ||| |||||||    
T  25064895 gacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 25093495 - 25093558
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||| | |||  |||| ||||||||||| |||||||| ||||||||| ||||||||    
T  25093495 acacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtg 25093558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 45451554 - 45451609
Alignment:
Q  66 acaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||| ||||| ||||||||||||| ||||||||||| |||| ||||||||    
T  45451554 acactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtg 45451609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 14840358 - 14840304
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    |||||||| |||||  ||| ||||| |||||||||||||||||||| ||||||||    
T  14840358 gacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 4466667 - 4466622
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||||||    
T  4466667 gacactccgacaccggtaataatttaagaaaatcatataattcagt 4466622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 11313861 - 11313812
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||||| ||||| ||||| |||||||||||||||| ||| |||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatat 11313812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 14027961 - 14028063
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| |||||||| |||||  ||||||| ||||||||  |||||  |||||| |||||   ||| ||||||||||| ||| |||| ||||||||| |||    
T  14027961 atgaagcacggatacggacacggacaccggacacgacacggacac--cgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgt 14028058  T
Q  117 cggtg 121  Q
    |||||    
T  14028059 cggtg 14028063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 14979175 - 14979224
Alignment:
Q  59 cacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatt 108  Q
    ||||||||||| ||||| ||||| | |||||||||||||||||| |||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 26508102 - 26508167
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgc 122  Q
    ||||||| ||||| ||||| ||||| | |||||||||||||||||| |||||| |  |||||||||    
T  26508102 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgc 26508167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 28917993 - 28918062
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtg 126  Q
    ||||||||||||  ||||| ||||| | |||||||||||||||||| |||||| |  |||||||| ||||    
T  28917993 gacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 30994940 - 30994895
Alignment:
Q  66 acaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    |||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  30994940 acactgctaataatttaagaaaatcacacaattcagtgtaattata 30994895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 38731221 - 38731274
Alignment:
Q  68 accgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| ||||| | |||||||||||||||||| || |||||| ||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtg 38731274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 40052314 - 40052367
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattca 100  Q
    ||||||||  ||||||||||||| ||||| ||||| | ||||||||||||||||    
T  40052314 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 4991034 - 4990982
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| ||||||||||||| | ||| ||||||| |||||||||||| ||||||    
T  4991034 gacactccgacaccgctaatagtttgagaaaattacataattcagtgtaatta 4990982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 14209105 - 14209157
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||  |||| ||||| | |||||||||||||||||| ||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaatta 14209157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 14618776 - 14618828
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||| |||||| |||| |||||||||||| ||||||||||||| |||| ||||    
T  14618776 acgctgacacccctaataatttaagaaaaccacataattcagtgtaataatat 14618828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 21257045 - 21257001
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| ||||| ||||| | |||||||||||||||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataatta 21257001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 26290363 - 26290423
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||||||||||||  ||| ||||| ||||||||||||| ||| || ||||||||| ||||    
T  26290363 gacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtc 26290423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 34910309 - 34910361
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||  |||| ||||| | |||||||||||||||||| ||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 22234958 - 22234886
Alignment:
Q  57 gacacgccgacaccgctaaaaattt-aagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||| |||||||| ||||||    
T  22234958 gacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtc 22234886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 8423779 - 8423721
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtg 8423721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcgg 119  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||| ||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 46160878 - 46160959
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||| |||||||||||| ||| ||||||| | ||||||| |||||||||||| | ||||||| |||||||| ||||||    
T  46160878 acacgacacagacacgccgacgccgttaaaaatatgagaaaataacataattcagtgttattatatgtgtcggtgtcgtgtc 46160959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 9996816 - 9996896
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||| ||||||  |||||| |  || ||||| |||||||||||||||||||||||||||||| | ||||||    
T  9996816 gacaccgaacacgacacagacac--cgacactgacaataatttgagaaaatcacataattcagtataattatatgtctcggtg 9996896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 16189710 - 16189765
Alignment:
Q  66 acaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 1747205 - 1747258
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    |||||||||||||||||| || || |||||||||||||||||||| ||||||||    
T  1747205 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaattata 1747258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 13134444 - 13134513
Alignment:
Q  59 cacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||| ||| | |||||||||||||||||||||| ||| ||||||||| ||||| || ||||||    
T  13134444 cacgccgacactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtc 13134513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 23293053 - 23293001
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataatta 23293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 36635316 - 36635371
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||| ||||| |||| ||||| |||||||||||||||||||| |||||||||    
T  36635316 gacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatat 36635371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 35723452 - 35723391
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaat-cacataattcagtataattatatatgtc 117  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||||    
T  35723452 gacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtc 35723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 15029717 - 15029821
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||| || ||||| |||||  || |||| ||||||||  ||||||| ||||| ||||| ||||| | || ||||||||||||||| ||||||||| |||    
T  15029717 atgaagcagggatacggacatggagaccggacacgacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgt 15029816  T
Q  117 cggtg 121  Q
     ||||    
T  15029817 tggtg 15029821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 22440660 - 22440612
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||| ||| ||||| |||||||||||||||||||| |||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatat 22440612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 26504359 - 26504303
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||| ||||| ||||||||||||||| ||| |||||| ||||||||| |||||||    
T  26504359 cgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 44132685 - 44132641
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgt 44132641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 49653024 - 49652984
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  49653024 ctaataatttaagaaaatcagataattcagtataattatat 49652984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 903914 - 903969
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||| ||| ||||| ||| ||||| |||||||||||||||||||| |||||||||    
T  903914 gacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatat 903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 38148785 - 38148722
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    |||||||||||| | ||| |||||||||||||||||||| ||||| || |||||| || |||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgt 38148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 19097935 - 19097897
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  19097935 agaaaatcacgtaattcagtataattatatttgtcggtg 19097897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 24343499 - 24343553
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||||||| | ||| ||||| ||||||| |||||||||||| ||||||||    
T  24343499 gacacgccgacacggataataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 30522973 - 30522923
Alignment:
Q  66 acaccgctaaaaatttaagaaaatcacataattcagtataattatatatgt 116  Q
    ||||||||||  |||| |||||||||||||||||||| ||| |||||||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaactatatatgt 30522923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 4099953 - 4100028
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt---ataattatatatgtcggtgccgtgtct 129  Q
    ||||||| ||||||  ||||||||| ||| |||||||||||| |||   |||||||||| |||||||| |||||||    
T  4099953 gacacgctgacaccattaaaaatttgagacaatcacataatttagtgtaataattatatgtgtcggtgtcgtgtct 4100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 5775418 - 5775361
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||  ||| ||||| |||||||||||||||| ||| ||||||||| ||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtg 5775361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 7012058 - 7012103
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    ||||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  7012058 gacacgccgacaccgataataatttgagaaaatgacataattcagt 7012103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 11651201 - 11651156
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    |||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  11651201 gacacgtcgacacagctaataatttaaaaaaatcacataattcagt 11651156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 13783273 - 13783342
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtg 126  Q
    ||||| |||||||||||||  |||| |||| |||||| |||||||| ||||||||| || ||||| ||||    
T  13783273 gacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcgtg 13783342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 17446068 - 17446113
Alignment:
Q  62 gccgacaccgctaaaaatttaagaaaatcacataattcagtataat 107  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||||    
T  17446068 gccgacaccactaataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 21539934 - 21539877
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatat 114  Q
    |||| |||||||||  ||| ||||||||||||||| |||||| ||| |||||||||||    
T  21539934 gacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattatatat 21539877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 30982935 - 30982874
Alignment:
Q  67 caccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||  |||| ||||||||||||| |||||| ||||||||  |||||||| ||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtc 30982874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 49431017 - 49431070
Alignment:
Q  57 gacacgccgacaccgctaaaaattt-aagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| || |||||||||||||||||| ||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaatta 49431070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 35161034 - 35161082
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||| ||||  |||| ||||||||||||||||||||| ||||||||    
T  35161034 ccgacactgctactaattcaagaaaatcacataattcagtgtaattata 35161082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 53172 - 53243
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||| ||||| || ||||| |||||||||||||||||||| ||||||||  |||||||||||||||    
T  53172 gacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtc 53243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 3966495 - 3966566
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  3966495 gacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 28588746 - 28588677
Alignment:
Q  52 acatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||||||||||||| ||| ||||| |||||||||||||||||||| ||||||||  ||||||||    
T  28588746 acattgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtg 28588677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 17123040 - 17123104
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| |||||||||| ||||| |||||||||||||||  |||| |||||||||||||||||    
T  17123040 gacacgccaacaccgctaataatttgagaaaatcacataatcaagtacaattatatatgtcggtg 17123104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 22423864 - 22423808
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  22423864 ctaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtc 22423808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 2436896 - 2436985
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||   |||||||||||||||  | | ||||||| |||||||| ||||||    
T  2436896 gacaccggacacgacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgtc 2436985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 21814235 - 21814324
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||| | ||||||| ||||||||||||| |||||   ||| ||||||||||| ||| |||| ||||||||| |||||||| ||||||    
T  21814235 gacaccggaaacgacatggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtc 21814324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 27144455 - 27144520
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgc 122  Q
    ||||||||||||||||||| ||||| || ||||||||||||| ||| ||||||||| |||| ||||    
T  27144455 gacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtctgtgc 27144520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 34879342 - 34879403
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||| |||| |||| |||||    
T  34879342 gacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcg 34879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 6035475 - 6035545
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||||||||| ||||| || |||| | |||||||||| ||||||||| |||||||| ||||||    
T  6035475 gacacgccgacaccgctaataatttgag-aaataatataattcagtgtaattatatttgtcggtgtcgtgtc 6035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 6471948 - 6471886
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||||||| ||| |||| |||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 11685921 - 11685995
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||  |||| |||||||||||||| ||||| ||||| || ||||||| ||| ||||||||| ||||||||    
T  11685921 acacgacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtg 11685995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 18592070 - 18592136
Alignment:
Q  62 gccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||| | ||||||||||| |||||||||| | ||||||||| || ||||| ||||||    
T  18592070 gccgacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtc 18592136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 27932229 - 27932279
Alignment:
Q  59 cacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||| ||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 31084297 - 31084367
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||| ||||||||  ||||||||||||| ||||| ||||| | |||||||||||||||| | ||||||    
T  31084297 gacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatta 31084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 17593778 - 17593725
Alignment:
Q  68 accgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| ||||| |||||||||| ||||||||| ||||||||||||| ||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 12927646 - 12927706
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||| |||||| |||||| ||||| ||||||||| |||||| ||| ||||||||||||||    
T  12927646 gacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 15410515 - 15410451
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||||||| ||||||||||||| | || ||||||| |||| |||| ||| ||||    
T  15410515 gacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtg 15410451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 6401490 - 6401561
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||  |||||  ||| ||||||||||| ||| |||| ||||||||| |||||||| ||||||    
T  6401490 gacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtc 6401561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 21522742 - 21522813
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| ||||| ||||| | ||||| |||||||||||| |||||| |  |||||||| ||||||    
T  21522742 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtc 21522813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 21533308 - 21533379
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| ||||| ||||| | ||||| |||||||||||| |||||| |  |||||||| ||||||    
T  21533308 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtc 21533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 30098318 - 30098381
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    |||||| ||| |||| ||| ||||| |||||||||||||||||| | |||||||| ||||||||    
T  30098318 gacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 30099120 - 30099041
Alignment:
Q  42 accgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| |||||||||||||||||||||||  |||||  ||| | | |||| |||||||| || ||||||||| ||||||||    
T  30099120 accggacacgacatagacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtg 30099041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 35017029 - 35017084
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||||| ||| |||| ||||| |||||||||||||||| ||| |||||||||    
T  35017029 gacacgccgaaaccactaataatttgagaaaatcacataatttagtgtaattatat 35017084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 39758272 - 39758327
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggt 120  Q
    ||||| ||||||  ||| |||||||||||||||||||| ||||||||| |||||||    
T  39758272 gacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 41091316 - 41091253
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||| |||||  |||| |||||||||||||||||||| ||||||||| ||||| || ||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 41091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 38816762 - 38816708
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcac-ataattcagtataattat 110  Q
    ||||||||||||||||||| ||||| |||||||| | ||| ||||||||||||||    
T  38816762 gacacgccgacaccgctaataatttgagaaaatcgctatatttcagtataattat 38816708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 42029743 - 42029808
Alignment:
Q  56 agacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||||   |||||| || |||||||||||||||||| | ||||||||| | ||||||    
T  42029743 agacacgccgacacaattaaaaaatttagaaaatcacataattcaatgtaattatatgtatcggtg 42029808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 6247614 - 6247666
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||  |||| ||||| | |||||||||||||||||| ||||||    
T  6247614 gacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 6326364 - 6326312
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||| |||||  ||||| ||||||| |||||||||||| ||||||    
T  6326364 gacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaatta 6326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 14674261 - 14674313
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||| ||| ||||||    
T  14674261 gacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 17925219 - 17925175
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||||||||||||| | |||| |||| ||||||||    
T  17925219 aatttaagaaaatcacataattcaatgtaataatatgtgtcggtg 17925175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 19579696 - 19579764
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||| ||||| ||||| |||||||||||||||| |||  ||||| |  |||||||| ||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtc 19579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 21191123 - 21191071
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||| |||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  21191123 gacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 22299547 - 22299496
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| ||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  22299547 gacacaccgacacagctaataatttaa-aaaatcacatgattcagtataatta 22299496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 26716130 - 26716178
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattc 99  Q
    ||||| |||| |||||||| ||||| ||||| |||||||||||||||||    
T  26716130 gacattgacatgccgacactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 26985870 - 26985918
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattc 99  Q
    ||||| |||| |||||||| ||||| ||||| |||||||||||||||||    
T  26985870 gacattgacatgccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 33178017 - 33178069
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||  |||| ||||||| |||||||||||||| ||| ||||||    
T  33178017 gacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 39698533 - 39698585
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||| ||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  39698533 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 21616754 - 21616809
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  21616754 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatat 21616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 23718018 - 23718082
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||||    
T  23718018 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 24105690 - 24105754
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||| ||||||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||||    
T  24105690 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 31808069 - 31808129
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  31808069 gacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 19573970 - 19574024
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataacataattcagtgtaattata 19574024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 41942097 - 41942155
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatg 115  Q
    ||||||| | ||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  41942097 gacacgcagtcaccgttaaaaatttgagaaaattacataattcagtataattatatatg 41942155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 44860320 - 44860382
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgt 127  Q
    ||||||||||| ||||| |||||||| ||||||||||| ||||||||| |||||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 21782885 - 21782832
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  21782885 gacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 37411311 - 37411250
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||    
T  37411311 gacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 28677904 - 28677956
Alignment:
Q  60 acgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||||||||||| ||||| | |||||||||||||||||| |||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatat 28677956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 36096451 - 36096371
Alignment:
Q  48 cacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||  ||||||||||||| ||||||  ||| ||||||||||| ||| |||| ||||||||| |||||||| ||||||    
T  36096451 cacgacacggacacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtc 36096371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 2423861 - 2423916
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||||||  |||||||||||| ||||||||| |||||| |||||||||||||    
T  2423861 gacacgccgacgacgctaaaaatttgagaaaatcatataatttagtataattatat 2423916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 18276518 - 18276577
Alignment:
Q  62 gccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| ||||| |||||||||| ||||||||| ||||||| | ||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtg 18276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 16069321 - 16069268
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    ||||||||||||||| ||| ||||||| ||||||| |||||||||| |||||||    
T  16069321 gacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 24894381 - 24894426
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  24894381 gacacgccgacacagctaataatttaaaaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 42832344 - 42832279
Alignment:
Q  56 agacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||| ||||||||||||| ||||| ||||||| ||||| |||||| ||||||||  ||||||||    
T  42832344 agacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtg 42832279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 20242794 - 20242730
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||  ||||   ||| |||||||||||||||||||| ||||||||| ||||||||    
T  20242794 gacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtg 20242730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 21091715 - 21091767
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| ||||||||||||| ||||||||||||| ||||| |||||| ||||||    
T  21091715 gacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaatta 21091767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 31018582 - 31018646
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| |||||||||| ||||| |||||||||||| ||| ||| ||||||||  ||||||||    
T  31018582 gacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtg 31018646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 1327976 - 1328023
Alignment:
Q  63 ccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    ||||||||||||| ||||| ||||||||| | ||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatcataaaattcagtataattat 1328023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 15909699 - 15909644
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatat 112  Q
    |||||||||| || ||||||| ||| ||||||| |||||||||||| |||||||||    
T  15909699 gacacgccgatacagctaaaattttgagaaaattacataattcagtgtaattatat 15909644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 35973988 - 35973949
Alignment:
Q  79 tttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  35973988 tttaagaaaataacataattcaatataattatatatgtcg 35973949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 18889667 - 18889594
Alignment:
Q  47 acacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||  ||||||| ||| ||||||| || || |||||||||||||||||||| |||| |||| ||||||||    
T  18889667 acacgacacggacacgc-gacgccgctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtg 18889594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 38117244 - 38117174
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||| ||||||||  ||||||||||||| ||||| ||||| | ||||||||||| ||| || ||||||    
T  38117244 gacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaatta 38117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 5367199 - 5367248
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||||| || ||||||||||||||||| ||||||||| ||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtg 5367248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 21374807 - 21374714
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacg-acatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||| |||||||| |||||  ||||||| ||||| |||   |||||||||||| ||||| ||||| | ||||| |||||||||||| ||||||    
T  21374807 atgaagcacggatacggacacggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 26769463 - 26769540
Alignment:
Q  17 atgaaacacggataaggacagagacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacat 94  Q
    ||||| |||||||| |||||  ||||||| |||||||| ||||||||||||||  |||| ||||| | || |||||||    
T  26769463 atgaagcacggatacggacacggacaccggacacgacacagacacgccgacacaactaataatttgaaaatatcacat 26769540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 31026698 - 31026751
Alignment:
Q  68 accgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| ||| ||||||||||||| |||||||||| | |||| |||||||||||||    
T  31026698 accgataataatttaagaaaatgacataattcaatgtaatcatatatgtcggtg 31026751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 34785023 - 34784978
Alignment:
Q  83 agaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||||||| ||| ||||||||| |||||||| ||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtc 34784978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 35447953 - 35447900
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattata 111  Q
    |||||| |||| |||||| |||| |||||||| |||||||||||||||| ||||    
T  35447953 acacgctgacatcgctaataattaaagaaaattacataattcagtataactata 35447900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 18420501 - 18420437
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||| |||| ||||| ||||| |||||||||||||||||| |  |||||||  ||||||||    
T  18420501 gacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtg 18420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 18622613 - 18622669
Alignment:
Q  72 ctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| ||||||| |||||||||||||||||| ||||||||  ||| |||| ||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 24975385 - 24975321
Alignment:
Q  64 cgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||| ||||| ||||||||  |||||||||| ||| |||||  ||||||| ||||||    
T  24975385 cgacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtc 24975321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 27460018 - 27460070
Alignment:
Q  57 gacacgccgacaccgctaaaaattt-aagaaaatcacataattcagtataatt 108  Q
    ||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||    
T  27460018 gacacgccgacacagctaataatttgaaaaaaatgacataattcagtataatt 27460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 28524419 - 28524479
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||||||| || ||||||| |||  | ||||||||||||||||| ||||||||| |||||    
T  28524419 acacgccgatacagctaaaattttgtgcaaatcacataattcagtgtaattatatgtgtcg 28524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 29970608 - 29970544
Alignment:
Q  65 gacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtct 129  Q
    ||||||||||| ||||| |||||||| |||| |||||| |||| |||| ||||| || |||||||    
T  29970608 gacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcgtgtct 29970544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 30404917 - 30404865
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| | ||| ||||| | |||||||||||||||||| ||||||    
T  30404917 gacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 31284041 - 31284093
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattat 110  Q
    |||||||||||| ||||| ||||| ||||||||||||||| || | |||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatcacataatccattgtaattat 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 41843433 - 41843497
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||   |||||  ||| || |||||||||||||| |||||||||||| ||||||||    
T  41843433 gacacgccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtg 41843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 28843 - 28906
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| ||| |||||||||||||| ||||||||| | ||||||||| ||||||||    
T  28843 acacgccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtg 28906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 135378 - 135308
Alignment:
Q  58 acacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||| ||||||| ||||| ||||| ||||||||||||||||| || ||||||||| |||||||| ||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 8658 - 8730
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtct 129  Q
    |||||| ||||||  |||| |||||| |||||||||||| |||||||||||||||  |||||||| |||||||    
T  8658 gacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgtct 8730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 85040 - 84976
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||||||||||||| |||  ||||||||||||||| ||||||  || ||||||||||||||||||    
T  85040 gacacgccgacaccactactaatttaagaaaatcatataattatgtgtaattatatatgtcggtg 84976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 92799 - 92851
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||    
T  92799 gacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 1630 - 1700
Alignment:
Q  51 gacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    |||| |||||||||||||||| ||| ||||| ||||||||| ||||||  |||||||||||  ||||||||    
T  1630 gacacagacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtg 1700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 20164 - 20216
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  20164 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 51803 - 51855
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  51803 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 46674 - 46738
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtg 121  Q
    ||||||||||||| | ||| ||||| | |||||||||||||||||| |||||| | |||||||||    
T  46674 gacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtg 46738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 99872 - 99956
Alignment:
Q  44 cgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    |||||||||||  |||| | |||||||| ||| ||||| ||||||| |||||||||| | ||||||||| ||| |||| ||||||    
T  99872 cgaacacgacacggacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 90855 - 90896
Alignment:
Q  77 aatttaagaaaatcacataattcagtataattatatatgtcg 118  Q
    ||||| ||||||||| |||||||||| |||||||||||||||    
T  90855 aatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 23412 - 23483
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtcggtgccgtgtc 128  Q
    ||||||||||||| | ||| || | || |||||||||||||||||| ||||||||  |||||||| ||||||    
T  23412 gacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 33446 - 33378
Alignment:
Q  39 gacaccgaacacgacatagacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||| ||||||||  ||||||||||||| ||||| ||||| | ||||| |||||||||||| ||||||    
T  33446 gacaccggacacgaca--gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 13392 - 13437
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    |||||||||||||  |||| ||||| ||||||||||||||||||||    
T  13392 gacacgccgacacaactaataatttgagaaaatcacataattcagt 13437  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 21935 - 21890
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagt 102  Q
    |||||||||||||  |||| ||||| ||||||||||||||||||||    
T  21935 gacacgccgacacaactaataatttgagaaaatcacataattcagt 21890  T

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Target: scaffold1528 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 1027 - 1087
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataattatatatgtc 117  Q
    ||||| ||||||||||||| ||||| | ||||| |||||||||||| ||| ||||| ||||    
T  1027 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 1087  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 14522 - 14574
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    |||||||||||||  |||| ||||| | |||||||||||||||||| ||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 192316 - 192264
Alignment:
Q  57 gacacgccgacaccgctaaaaatttaagaaaatcacataattcagtataatta 109  Q
    ||||||||||||||| ||| ||||| ||||||| ||||||||| || ||||||    
T  192316 gacacgccgacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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