View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8673_low_24 (Length: 218)

Name: NF8673_low_24
Description: NF8673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8673_low_24
NF8673_low_24
[»] chr5 (50 HSPs)
chr5 (13-218)||(10298482-10298668)
chr5 (84-218)||(8419992-8420121)
chr5 (104-177)||(21351906-21351979)
chr5 (105-189)||(31084309-31084393)
chr5 (112-177)||(42893353-42893418)
chr5 (103-218)||(13287354-13287474)
chr5 (106-177)||(6247609-6247680)
chr5 (103-177)||(21191057-21191131)
chr5 (103-172)||(14674253-14674322)
chr5 (114-171)||(15405062-15405119)
chr5 (103-171)||(39698525-39698593)
chr5 (105-163)||(41995457-41995515)
chr5 (120-177)||(21576746-21576803)
chr5 (112-177)||(33178018-33178083)
chr5 (112-184)||(41633728-41633800)
chr5 (183-218)||(3966597-3966632)
chr5 (114-188)||(5894823-5894897)
chr5 (103-177)||(21522734-21522808)
chr5 (103-177)||(21533300-21533374)
chr5 (112-177)||(30135306-30135372)
chr5 (116-177)||(7677702-7677763)
chr5 (92-161)||(17925189-17925258)
chr5 (117-177)||(21542028-21542088)
chr5 (119-218)||(22423765-22423871)
chr5 (90-177)||(3966474-3966561)
chr5 (13-52)||(10290225-10290264)
chr5 (183-218)||(14873605-14873640)
chr5 (183-218)||(17123130-17123165)
chr5 (183-218)||(21576686-21576721)
chr5 (106-218)||(24906253-24906373)
chr5 (183-218)||(35017126-35017161)
chr5 (103-170)||(4105241-4105310)
chr5 (118-172)||(12159951-12160005)
chr5 (184-218)||(16304367-16304401)
chr5 (114-152)||(18316951-18316989)
chr5 (103-177)||(19579685-19579759)
chr5 (183-217)||(21190998-21191032)
chr5 (103-177)||(37328845-37328919)
chr5 (184-218)||(39698636-39698670)
chr5 (183-217)||(43001888-43001922)
chr5 (103-172)||(17177029-17177098)
chr5 (184-217)||(18421779-18421812)
chr5 (94-163)||(30098301-30098370)
chr5 (183-216)||(39268541-39268574)
chr5 (183-215)||(4105342-4105374)
chr5 (103-151)||(6770527-6770575)
chr5 (103-151)||(19552570-19552618)
chr5 (185-217)||(21351852-21351884)
chr5 (117-177)||(30183547-30183607)
chr5 (126-170)||(43001807-43001851)
[»] chr6 (43 HSPs)
chr6 (84-177)||(7801157-7801250)
chr6 (103-218)||(426479-426589)
chr6 (112-218)||(2117069-2117174)
chr6 (70-189)||(12696277-12696394)
chr6 (70-177)||(28715243-28715353)
chr6 (106-172)||(1681745-1681811)
chr6 (103-177)||(9107371-9107445)
chr6 (103-177)||(15489733-15489807)
chr6 (103-177)||(34595118-34595192)
chr6 (104-177)||(10770675-10770748)
chr6 (104-177)||(16766682-16766755)
chr6 (70-170)||(8776981-8777086)
chr6 (105-172)||(16833294-16833361)
chr6 (104-218)||(7938101-7938218)
chr6 (103-177)||(8365520-8365594)
chr6 (106-177)||(17302543-17302615)
chr6 (103-169)||(17841598-17841664)
chr6 (103-177)||(28152083-28152156)
chr6 (106-172)||(31959146-31959212)
chr6 (112-177)||(853860-853925)
chr6 (112-177)||(7977831-7977896)
chr6 (122-171)||(31384923-31384972)
chr6 (117-172)||(1191706-1191761)
chr6 (112-177)||(4877935-4878001)
chr6 (84-177)||(7027206-7027300)
chr6 (127-170)||(4118341-4118384)
chr6 (183-218)||(4878025-4878060)
chr6 (183-218)||(7248452-7248487)
chr6 (183-218)||(17327591-17327626)
chr6 (84-163)||(34225824-34225906)
chr6 (103-177)||(3398603-3398676)
chr6 (104-218)||(5732475-5732584)
chr6 (103-177)||(7930289-7930363)
chr6 (126-172)||(9522898-9522944)
chr6 (184-218)||(9629478-9629512)
chr6 (184-218)||(10842617-10842651)
chr6 (184-218)||(17841530-17841564)
chr6 (185-218)||(7723200-7723233)
chr6 (183-216)||(32978842-32978875)
chr6 (112-177)||(33001290-33001355)
chr6 (118-166)||(5970120-5970168)
chr6 (119-163)||(24115862-24115906)
chr6 (112-172)||(30866150-30866210)
[»] chr4 (54 HSPs)
chr4 (103-218)||(30298930-30299047)
chr4 (103-218)||(30327798-30327915)
chr4 (112-189)||(12895105-12895182)
chr4 (118-177)||(24613702-24613761)
chr4 (92-170)||(11596360-11596438)
chr4 (103-177)||(12797339-12797412)
chr4 (103-177)||(23292987-23293061)
chr4 (95-172)||(24543957-24544035)
chr4 (119-177)||(54580024-54580082)
chr4 (105-170)||(19482654-19482719)
chr4 (105-170)||(40481623-40481687)
chr4 (117-189)||(3947755-3947827)
chr4 (117-177)||(21945501-21945561)
chr4 (109-170)||(715615-715677)
chr4 (109-170)||(752941-753003)
chr4 (84-177)||(4157112-4157207)
chr4 (105-171)||(14126118-14126184)
chr4 (126-172)||(29205451-29205497)
chr4 (103-177)||(35157986-35158060)
chr4 (112-177)||(2361976-2362041)
chr4 (120-165)||(14465088-14465133)
chr4 (126-171)||(28964255-28964300)
chr4 (70-151)||(32273553-32273633)
chr4 (103-171)||(4383352-4383419)
chr4 (182-218)||(4383448-4383484)
chr4 (92-152)||(11110708-11110768)
chr4 (186-218)||(12884348-12884380)
chr4 (97-177)||(16073373-16073452)
chr4 (103-173)||(20633469-20633536)
chr4 (112-171)||(28084514-28084574)
chr4 (112-172)||(31800484-31800544)
chr4 (117-177)||(34306805-34306864)
chr4 (183-218)||(715546-715581)
chr4 (183-218)||(752872-752907)
chr4 (183-218)||(824217-824252)
chr4 (183-218)||(5775305-5775340)
chr4 (183-218)||(14465006-14465041)
chr4 (127-217)||(22440559-22440651)
chr4 (183-218)||(23292927-23292962)
chr4 (183-218)||(24613631-24613666)
chr4 (183-218)||(35239202-35239237)
chr4 (183-218)||(37203335-37203370)
chr4 (112-171)||(38847019-38847078)
chr4 (103-177)||(49431009-49431084)
chr4 (184-218)||(3064869-3064903)
chr4 (181-211)||(17210039-17210069)
chr4 (104-170)||(27706185-27706251)
chr4 (127-172)||(6485617-6485662)
chr4 (112-177)||(12895275-12895340)
chr4 (181-218)||(18844424-18844461)
chr4 (183-216)||(28084607-28084640)
chr4 (91-170)||(37203239-37203315)
chr4 (103-163)||(36635308-36635368)
chr4 (114-170)||(51701253-51701309)
[»] chr7 (41 HSPs)
chr7 (92-184)||(9408328-9408420)
chr7 (113-218)||(3991318-3991431)
chr7 (106-218)||(35861951-35862069)
chr7 (103-177)||(11061077-11061151)
chr7 (103-177)||(18215187-18215261)
chr7 (70-172)||(24105631-24105731)
chr7 (103-218)||(27945025-27945136)
chr7 (103-188)||(13770675-13770760)
chr7 (112-177)||(24339635-24339700)
chr7 (117-177)||(7438704-7438764)
chr7 (84-188)||(9778462-9778569)
chr7 (112-170)||(25481895-25481953)
chr7 (104-189)||(5409825-5409910)
chr7 (112-169)||(8234139-8234196)
chr7 (106-189)||(32094009-32094093)
chr7 (70-177)||(43027470-43027576)
chr7 (183-218)||(1433542-1433577)
chr7 (90-177)||(11665441-11665528)
chr7 (106-177)||(33994199-33994270)
chr7 (90-168)||(11831404-11831481)
chr7 (126-172)||(26033467-26033513)
chr7 (112-177)||(7197298-7197363)
chr7 (185-218)||(18035806-18035839)
chr7 (105-177)||(6630913-6630985)
chr7 (112-184)||(25822648-25822720)
chr7 (183-218)||(5409772-5409807)
chr7 (117-177)||(11272587-11272649)
chr7 (183-218)||(29763130-29763165)
chr7 (183-218)||(40131940-40131975)
chr7 (184-218)||(15680893-15680927)
chr7 (105-151)||(29763201-29763247)
chr7 (103-173)||(43249977-43250047)
chr7 (185-218)||(2334345-2334378)
chr7 (105-150)||(21826259-21826304)
chr7 (185-218)||(30813882-30813915)
chr7 (122-170)||(7058429-7058477)
chr7 (103-151)||(10042921-10042969)
chr7 (105-184)||(21560484-21560568)
chr7 (103-163)||(29787384-29787444)
chr7 (112-172)||(40287363-40287422)
chr7 (133-177)||(48438560-48438604)
[»] chr1 (56 HSPs)
chr1 (97-171)||(32434723-32434798)
chr1 (105-218)||(22881568-22881689)
chr1 (70-177)||(38078662-38078769)
chr1 (90-177)||(37598803-37598889)
chr1 (103-218)||(48450551-48450662)
chr1 (94-177)||(31672896-31672979)
chr1 (114-177)||(40258934-40258997)
chr1 (103-177)||(1704993-1705067)
chr1 (85-218)||(24334665-24334799)
chr1 (119-177)||(24577187-24577245)
chr1 (119-183)||(28273083-28273147)
chr1 (103-178)||(1815241-1815316)
chr1 (90-177)||(46348384-46348470)
chr1 (112-170)||(113292-113350)
chr1 (119-189)||(1486698-1486768)
chr1 (90-168)||(18556466-18556543)
chr1 (112-170)||(32461471-32461529)
chr1 (117-218)||(35702543-35702649)
chr1 (103-177)||(42359450-42359524)
chr1 (70-163)||(398780-398878)
chr1 (112-172)||(21378571-21378631)
chr1 (105-177)||(47989484-47989555)
chr1 (70-214)||(3490352-3490497)
chr1 (114-177)||(6332666-6332728)
chr1 (183-218)||(9828138-9828173)
chr1 (119-177)||(18190109-18190167)
chr1 (119-177)||(22515888-22515946)
chr1 (128-177)||(18337338-18337387)
chr1 (103-184)||(38503304-38503385)
chr1 (117-177)||(51410022-51410083)
chr1 (105-218)||(30359374-30359483)
chr1 (120-172)||(31015044-31015096)
chr1 (103-163)||(34298420-34298480)
chr1 (183-214)||(5898211-5898242)
chr1 (117-171)||(6427459-6427516)
chr1 (112-171)||(14359529-14359587)
chr1 (183-218)||(22947813-22947848)
chr1 (183-218)||(37598914-37598949)
chr1 (183-218)||(47989591-47989626)
chr1 (105-163)||(2288182-2288240)
chr1 (103-177)||(5376501-5376575)
chr1 (127-177)||(6612172-6612222)
chr1 (183-217)||(16297223-16297257)
chr1 (184-218)||(21365993-21366027)
chr1 (184-218)||(22515828-22515862)
chr1 (183-217)||(42359391-42359425)
chr1 (126-171)||(5927347-5927392)
chr1 (93-162)||(9828019-9828087)
chr1 (112-177)||(19058857-19058922)
chr1 (90-189)||(35919265-35919370)
chr1 (84-177)||(36878427-36878519)
chr1 (122-170)||(2283669-2283717)
chr1 (103-163)||(6427334-6427394)
chr1 (103-151)||(9103624-9103672)
chr1 (103-151)||(16812527-16812575)
chr1 (119-177)||(17778549-17778604)
[»] chr2 (38 HSPs)
chr2 (103-218)||(19536362-19536473)
chr2 (70-171)||(21374706-21374807)
chr2 (103-218)||(20539633-20539749)
chr2 (90-177)||(37558949-37559035)
chr2 (103-177)||(15657848-15657922)
chr2 (112-218)||(18255945-18256046)
chr2 (103-177)||(30717531-30717605)
chr2 (103-177)||(15972857-15972931)
chr2 (103-177)||(18421947-18422021)
chr2 (94-218)||(24894363-24894486)
chr2 (103-177)||(30335401-30335475)
chr2 (103-172)||(6940239-6940308)
chr2 (104-177)||(18841014-18841087)
chr2 (103-172)||(23718010-23718079)
chr2 (103-172)||(24105682-24105751)
chr2 (103-172)||(30404856-30404925)
chr2 (117-177)||(20473320-20473380)
chr2 (118-177)||(974746-974805)
chr2 (90-169)||(37419714-37419793)
chr2 (119-177)||(2438720-2438778)
chr2 (84-177)||(26769471-26769569)
chr2 (112-177)||(12668424-12668489)
chr2 (119-172)||(12940941-12940994)
chr2 (105-170)||(38117167-38117232)
chr2 (126-218)||(34691770-34691857)
chr2 (126-218)||(34714182-34714269)
chr2 (105-177)||(36756345-36756417)
chr2 (117-177)||(5040730-5040792)
chr2 (70-188)||(14996213-14996330)
chr2 (103-177)||(23058443-23058518)
chr2 (183-218)||(26769605-26769640)
chr2 (183-218)||(37419837-37419872)
chr2 (183-218)||(42511323-42511358)
chr2 (183-217)||(2438661-2438695)
chr2 (119-177)||(11223864-11223922)
chr2 (181-218)||(28596550-28596587)
chr2 (105-170)||(29176501-29176566)
chr2 (103-171)||(21091707-21091775)
[»] scaffold0011 (1 HSPs)
scaffold0011 (92-178)||(17749-17835)
[»] scaffold0027 (1 HSPs)
scaffold0027 (70-218)||(46628-46775)
[»] chr3 (51 HSPs)
chr3 (126-217)||(25948848-25948939)
chr3 (90-184)||(34910289-34910382)
chr3 (106-177)||(10954939-10955010)
chr3 (103-177)||(10335287-10335361)
chr3 (119-215)||(21256952-21257045)
chr3 (103-177)||(55401059-55401133)
chr3 (106-170)||(4987299-4987363)
chr3 (112-171)||(14209106-14209165)
chr3 (105-172)||(20503451-20503518)
chr3 (103-177)||(8587022-8587096)
chr3 (92-177)||(25775481-25775567)
chr3 (103-177)||(28917985-28918059)
chr3 (70-171)||(14216845-14216944)
chr3 (70-171)||(14222974-14223073)
chr3 (85-177)||(21479079-21479176)
chr3 (119-172)||(26508110-26508163)
chr3 (112-177)||(28812508-28812573)
chr3 (70-177)||(39756188-39756294)
chr3 (117-186)||(49651778-49651847)
chr3 (114-210)||(7928445-7928536)
chr3 (92-148)||(10318064-10318119)
chr3 (70-167)||(14747513-14747610)
chr3 (105-177)||(14829676-14829747)
chr3 (105-177)||(16000017-16000089)
chr3 (92-163)||(21305218-21305290)
chr3 (117-173)||(35994743-35994798)
chr3 (114-177)||(1509534-1509597)
chr3 (104-171)||(10268493-10268560)
chr3 (112-171)||(14832092-14832151)
chr3 (183-218)||(34910400-34910435)
chr3 (114-177)||(51206354-51206417)
chr3 (94-151)||(8412972-8413029)
chr3 (85-171)||(32400715-32400798)
chr3 (105-177)||(41961651-41961723)
chr3 (118-177)||(750619-750678)
chr3 (183-218)||(4990913-4990948)
chr3 (183-218)||(20503548-20503583)
chr3 (183-218)||(34185053-34185088)
chr3 (184-218)||(8789489-8789523)
chr3 (184-218)||(8842413-8842447)
chr3 (103-177)||(15796295-15796369)
chr3 (103-173)||(24205046-24205116)
chr3 (103-177)||(26492206-26492280)
chr3 (105-151)||(40052318-40052364)
chr3 (184-218)||(55401159-55401193)
chr3 (117-162)||(14979179-14979224)
chr3 (112-177)||(34185124-34185189)
chr3 (118-170)||(3164033-3164085)
chr3 (104-172)||(17005625-17005693)
chr3 (117-177)||(27505244-27505304)
chr3 (112-172)||(29508437-29508497)
[»] chr8 (42 HSPs)
chr8 (103-177)||(22651960-22652034)
chr8 (90-170)||(36450762-36450841)
chr8 (98-169)||(30271300-30271371)
chr8 (103-177)||(15816130-15816204)
chr8 (108-177)||(4298887-4298956)
chr8 (70-177)||(25566789-25566899)
chr8 (118-177)||(29447111-29447170)
chr8 (103-177)||(18170483-18170557)
chr8 (103-177)||(18634051-18634125)
chr8 (105-171)||(22197749-22197815)
chr8 (107-177)||(24613509-24613578)
chr8 (124-177)||(4948657-4948710)
chr8 (104-177)||(13436965-13437038)
chr8 (103-172)||(25192353-25192422)
chr8 (103-172)||(29510310-29510379)
chr8 (114-218)||(31514867-31514972)
chr8 (118-177)||(2572057-2572116)
chr8 (114-177)||(8342967-8343030)
chr8 (112-171)||(8343309-8343368)
chr8 (183-218)||(22652070-22652105)
chr8 (103-177)||(5813576-5813650)
chr8 (103-177)||(20873053-20873127)
chr8 (185-218)||(11803355-11803388)
chr8 (95-170)||(21465391-21465463)
chr8 (106-170)||(22595981-22596045)
chr8 (126-218)||(34897092-34897179)
chr8 (117-173)||(41831945-41832001)
chr8 (117-172)||(18407717-18407772)
chr8 (183-218)||(24413500-24413535)
chr8 (187-218)||(27067232-27067263)
chr8 (126-177)||(28745505-28745556)
chr8 (183-218)||(37283756-37283791)
chr8 (107-177)||(31556985-31557054)
chr8 (184-217)||(3025635-3025668)
chr8 (183-216)||(13203700-13203733)
chr8 (126-171)||(30077394-30077439)
chr8 (118-170)||(17468516-17468568)
chr8 (103-147)||(24196628-24196672)
chr8 (112-172)||(31236583-31236643)
chr8 (103-163)||(36934654-36934714)
chr8 (128-172)||(40332200-40332244)
chr8 (105-173)||(44067502-44067570)
[»] scaffold0223 (1 HSPs)
scaffold0223 (103-218)||(20156-20278)
[»] scaffold0103 (1 HSPs)
scaffold0103 (103-170)||(51795-51862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (112-169)||(14523-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (103-171)||(178825-178894)
[»] scaffold0306 (1 HSPs)
scaffold0306 (103-177)||(13384-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (103-177)||(21869-21943)
[»] scaffold0007 (1 HSPs)
scaffold0007 (103-173)||(225273-225343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (105-170)||(19562-19626)
[»] scaffold0122 (1 HSPs)
scaffold0122 (112-177)||(8003-8067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (90-177)||(23740-23828)
[»] scaffold0793 (2 HSPs)
scaffold0793 (109-170)||(4891-4953)
scaffold0793 (183-218)||(4822-4857)
[»] scaffold0652 (1 HSPs)
scaffold0652 (103-177)||(463-537)
[»] scaffold0053 (1 HSPs)
scaffold0053 (103-177)||(8782-8856)
[»] scaffold0311 (1 HSPs)
scaffold0311 (103-140)||(10509-10546)
[»] scaffold0004 (2 HSPs)
scaffold0004 (103-171)||(92791-92859)
scaffold0004 (183-218)||(92905-92940)
[»] scaffold0475 (1 HSPs)
scaffold0475 (183-218)||(3391-3426)
[»] scaffold0171 (1 HSPs)
scaffold0171 (70-189)||(23373-23490)
[»] scaffold0021 (1 HSPs)
scaffold0021 (117-172)||(130480-130535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (112-170)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (112-166)||(33375-33429)
[»] scaffold0036 (1 HSPs)
scaffold0036 (183-217)||(9678-9712)
[»] scaffold0003 (1 HSPs)
scaffold0003 (103-177)||(241578-241652)
[»] scaffold0450 (1 HSPs)
scaffold0450 (117-177)||(8636-8696)
[»] scaffold0136 (1 HSPs)
scaffold0136 (127-171)||(3856-3900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (105-177)||(135313-135385)


Alignment Details
Target: chr5 (Bit Score: 120; Significance: 1e-61; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 10298482 - 10298668
Alignment:
Q  13 attcttgtgcagaagcgacacttaaaaaggaatgaggatttgagagggagtatgaccatgaagcacggatgcggatgcggacacggacaccggacactaa 112  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||                   ||||||    
T  10298482 attcttctgcagaagcgacacttaaaaaggaatgaggattggagagggagtatgaccatgaagcacggatgcgga-------------------cactaa 10298562  T
Q  113 cacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgc 212  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  10298563 cacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacgcctaatccgaggagtgtccgtgc 10298662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 8419992 - 8420121
Alignment:
Q  84 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 183  Q
    ||||| ||||||||||||||||||| | |||| |||||| | |||||||||||||||| | ||||||| |||||||||||||||||||| ||     |||    
T  8419992 cggatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtg-----tcg 8420086  T
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||| || ||||| |||||||| |||||||||||||    
T  8420087 gacgcgcctaattcgaggagtatccgtgcttcata 8420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 21351979 - 21351906
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 31084309 - 31084393
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 189  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||| | |||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg 31084393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 42893353 - 42893418
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  42893353 acacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 13287474 - 13287354
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg-----ttgtcctatcggacacgtctaatcc 197  Q
    |||||||||||||  |||||||  ||||||||||||||| ||||||||| || ||||| |||||||||||      |||||| ||||||||| ||||||     
T  13287474 cggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtcctgtcggacacgcctaatct 13287375  T
Q  198 gaggagtgtccgtgcttcata 218  Q
    |||||||||  ||||||||||    
T  13287374 gaggagtgtatgtgcttcata 13287354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 6247609 - 6247680
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 21191131 - 21191057
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||  |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21191131 cggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 21191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 14674253 - 14674322
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | |||||||||||||||||    
T  14674253 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 15405119 - 15405062
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  15405119 acactgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 39698525 - 39698593
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  39698525 cggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 41995457 - 41995515
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    |||||| |||| |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  41995457 gacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 21576803 - 21576746
Alignment:
Q  120 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 21576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 33178018 - 33178083
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||||||||||||||||||| ||||| |||||||||  | ||||||||||||||||| ||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 33178083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 41633728 - 41633800
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 184  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||| ||||| |||| ||||||    
T  41633728 acactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcgg 41633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 3966597 - 3966632
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  3966597 ggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 5894897 - 5894823
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 188  Q
    |||| ||||||||||||||||||||||| ||| |||||  ||| ||| ||||||||||| |||| | ||||||||    
T  5894897 acacggacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacac 5894823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 21522734 - 21522808
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21522734 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 21533300 - 21533374
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21533300 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 30135306 - 30135372
Alignment:
Q  112 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||||||||||||||| ||||| ||||||||  || ||||||||||||||||| ||||    
T  30135306 acacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 7677702 - 7677763
Alignment:
Q  116 accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||| |||||||||||||||| ||||||||| || || ||||| |||||||| ||||    
T  7677702 accgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtc 7677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 17925258 - 17925189
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaat 161  Q
    ||||||||||||||||||| ||| ||||||  || ||||||||| | ||| ||||||||| |||||||||    
T  17925258 gacacggacaccggacactgacataccgacctaaataataatttaagaaaatcacataattcaatgtaat 17925189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 21542028 - 21542088
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  21542028 ccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 21542088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 22423871 - 22423765
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg-------acacgtctaatccgaggagtgtccgtg 211  Q
    ||||| ||||||||||||| ||| ||||||||| |||| |||||| |  ||||| |||| | ||||       ||||| |||||||||||||||||||||    
T  22423871 gacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtctggacacgcctaatccgaggagtgtccgtg 22423772  T
Q  212 cttcata 218  Q
    |||||||    
T  22423771 cttcata 22423765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 3966474 - 3966561
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| ||||||| |||  |||||||  |||||||||||| ||| ||||| ||| || |||||||| | |||||| ||||    
T  3966474 cggacacggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 10290225 - 10290264
Alignment:
Q  13 attcttgtgcagaagcgacacttaaaaaggaatgaggatt 52  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  10290225 attcttatgcagaagcgacatttaaaaaggaatgaggatt 10290264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 14873605 - 14873640
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  14873605 ggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 17123130 - 17123165
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17123130 ggacacgcctaatccgaggagtgtccgtgcttcata 17123165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 21576721 - 21576686
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21576721 ggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 24906373 - 24906253
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc--------ctatcggacacgtctaatcc 197  Q
    ||||| |||| || |||||  ||||||||||||||| | ||||||| || ||||||||||||||||| | ||        | || ||||||| ||||| |    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggacatgacaataggacacgcctaattc 24906274  T
Q  198 gaggagtgtccgtgcttcata 218  Q
    |||||||||||||||||||||    
T  24906273 gaggagtgtccgtgcttcata 24906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 35017126 - 35017161
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  35017126 ggacacgcctaatccgaggagtgtccgtgcttcata 35017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 4105241 - 4105310
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaa--gtcacataatacaatgtaattacaagtgt 170  Q
    |||| ||| |||| |||||| ||||||||||||||||||   ||||||||| || |||||||||||||||    
T  4105241 cggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 12159951 - 12160005
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||||||||||||| |||||  ||||||||  ||||||||||||| |||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcg 12160005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 16304401 - 16304367
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  16304401 gacacgtctaatccgaggaatgtccgtgcttcata 16304367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 18316989 - 18316951
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataata 152  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  18316989 acaccgacacaactaataattttaaaaaatcacataata 18316951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 19579685 - 19579759
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| | || |||||||| |||||||||||| ||| |||||||||  | || |||||||||||||| ||||    
T  19579685 cggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtc 19579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 21191032 - 21190998
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||| |||||||||||||||||||||||||||    
T  21191032 ggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 37328919 - 37328845
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| | ||||||||||| | ||||||||| |||| ||||| ||| || |||||||||| |||||| ||||    
T  37328919 cggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtc 37328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 39698636 - 39698670
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  39698636 gacacgcctaatccgaggagtgtccgtgcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 43001888 - 43001922
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||| |||||||||||||||||||||||||||    
T  43001888 ggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 17177098 - 17177029
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| | || || ||||| |||||||||||||||| ||| | ||| || |||||||||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 18421812 - 18421779
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    |||||||||||||||||||||||| |||||||||    
T  18421812 gacacgtctaatccgaggagtgtctgtgcttcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 30098301 - 30098370
Alignment:
Q  94 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    ||||||||||||||||| ||||  ||| ||   ||||||||||| ||| ||||||||| |||||||||||    
T  30098301 cacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaatta 30098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 39268574 - 39268541
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttca 216  Q
    ||||||| ||||||||||||||||||||||||||    
T  39268574 ggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 4105342 - 4105374
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttc 215  Q
    ||||||| |||||||||||||||||||||||||    
T  4105342 ggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 6770527 - 6770575
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||||| |||||| ||||||||||||||||| | ||| |||||||||    
T  6770527 cggacactgacacactgacacaactaataatttaagaaaatcacataat 6770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 19552618 - 19552570
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  19552618 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 19552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 21351884 - 21351852
Alignment:
Q  185 acacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||||||||||| |||||||||||||||||    
T  21351884 acacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 30183547 - 30183607
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||||||||  |||||| || |  | ||||||||||||||| ||||    
T  30183547 ccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtc 30183607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 43001807 - 43001851
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||||||||||| | ||||||| || |||||||||||||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 7801250 - 7801157
Alignment:
Q  84 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  7801250 cggatacggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 7801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 426589 - 426479
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 202  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||     ||||||||| |||||| |||||    
T  426589 cggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtg-----tcggacacgcctaatctgagga 426495  T
Q  203 gtgtccgtgcttcata 218  Q
    ||||||||||||||||    
T  426494 gtgtccgtgcttcata 426479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 2117069 - 2117174
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtg 211  Q
    |||| |||||||  |||||||||||||||| ||||||||| ||||| ||||| |||||||| |||| | ||||||| | |||||| ||||||||||||||    
T  2117069 acactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg-tgtcgtgtcggacatgcctaatcggaggagtgtccgtg 2117167  T
Q  212 cttcata 218  Q
    |||||||    
T  2117168 cttcata 2117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 12696277 - 12696394
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    ||||||||||||| ||||  |||||||| |||| ||||||| |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||    
T  12696277 atgaagcacggatacggacacggacacg-acac-ggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtg 12696374  T
Q  170 tcgttgtcctatcggacacg 189  Q
    ||  |||| | |||||||||    
T  12696375 tcagtgtcgtgtcggacacg 12696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 28715243 - 28715353
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 166  Q
    ||||||||||||| ||||| |||||||||||||||||||| | ||  |||| |||||  |||||||||||||||| | ||||||| || |||||||||||    
T  28715243 atgaagcacggatacggatacggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaa 28715342  T
Q  167 gtgtcgttgtc 177  Q
    |||||| ||||    
T  28715343 gtgtcggtgtc 28715353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||| || |||||||||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 9107445 - 9107371
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  9107445 cggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 9107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 15489807 - 15489733
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| ||||    
T  15489807 cggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 34595118 - 34595192
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| | |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  34595118 cggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 34595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 10770748 - 10770675
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| |||| || |||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 10770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 16766682 - 16766755
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 8777086 - 8776981
Alignment:
Q  70 atgaagcacggatgcggatgcggaca-cggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 164  Q
    ||||||||||||| ||||  |||||| |||||||    |||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||    
T  8777086 atgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattac 8776987  T
Q  165 aagtgt 170  Q
    ||||||    
T  8776986 aagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 16833294 - 16833361
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 7938101 - 7938218
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc--tatcg-gacacgtctaatccgag 200  Q
    ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | |||||||| |||||||| |||||   | || |||||| || |||||||    
T  7938101 ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacaccgagacacgcctgatccgag 7938200  T
Q  201 gagtgtccgtgcttcata 218  Q
    ||||||||||||||||||    
T  7938201 gagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 8365594 - 8365520
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||||||| |  ||||||||||||||||| ||||    
T  8365594 cggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtc 8365520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 17302543 - 17302615
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||| | |||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||    
T  17302543 acactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtc 17302615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 17841664 - 17841598
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||    
T  17841664 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 28152083 - 28152156
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28152083 cggacactgacacgccgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 28152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 31959146 - 31959212
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||| |||| ||| |||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 853925 - 853860
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  853925 acacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 7977896 - 7977831
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 7977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 31384923 - 31384972
Alignment:
Q  122 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 1191761 - 1191706
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||    
T  1191761 ccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 4877935 - 4878001
Alignment:
Q  112 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| ||||||||||| |||||||||||||||  | | ||||||||||||||| ||||    
T  4877935 acacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtc 4878001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 7027206 - 7027300
Alignment:
Q  84 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||||||||||| |||||||||| || |||||||  || |||||||| ||||| ||||||||| || |||||||| | |||||| ||||    
T  7027206 cggatacggacacggacatcggacactaatacgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  127 taataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||||||||||||| |||||||||  |||||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 4878025 - 4878060
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4878025 ggacacgcctaatccgaggagtgtccgtgcttcata 4878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 7248452 - 7248487
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||| ||||||||||||||||||||||||||    
T  7248452 ggacacgtcaaatccgaggagtgtccgtgcttcata 7248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 17327626 - 17327591
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17327626 ggacacgcctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 34225906 - 34225824
Alignment:
Q  84 cggatgcggacacggacaccggacac--taac-acaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    ||||| ||||||||||||| ||||||  |||  |||| ||||||||||||||||||||||| || |||||| || ||||||||    
T  34225906 cggatacggacacggacactggacacgataaggacactgacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 3398603 - 3398676
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| ||||| || |||||||| |||| ||| ||||    
T  3398603 cggacactgacacgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtc 3398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 5732584 - 5732475
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggag 203  Q
    ||||||| |||| |||||||   ||||||||||| ||| ||||||| |  | |||||||| | |||||| ||     ||||||||| |||||||||||||    
T  5732584 ggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtg-----tcggacacgcctaatccgaggag 5732490  T
Q  204 tgtccgtgcttcata 218  Q
    ||||| |||||||||    
T  5732489 tgtccatgcttcata 5732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 7930289 - 7930363
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||  ||||||||| ||||||||||||||| |||||||||  | || |||| ||||||||| ||||    
T  7930289 cggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtc 7930363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||||| ||||| ||||||||| || |||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 9629478 - 9629512
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||| |||||||||    
T  9629478 gacacgtctaatccgaggagtgtccatgcttcata 9629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 10842617 - 10842651
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  10842617 gacacggctaatccgaggagtgtccgtgcttcata 10842651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 17841564 - 17841530
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  17841564 gacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 7723233 - 7723200
Alignment:
Q  185 acacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||| ||||||||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcata 7723200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 32978875 - 32978842
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttca 216  Q
    ||||||||||||||| ||||||||||||||||||    
T  32978875 ggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 33001355 - 33001290
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||  |||||||||||||||| |||||||||  |||||||||| | |||||| ||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtc 33001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 5970168 - 5970120
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 166  Q
    |||||||  ||||||||||||||| ||||||||| || |||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 24115906 - 24115862
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    ||||||||||||||||| ||||| ||||||||| |||| ||||||    
T  24115906 gacacaactaataatttcaaaaaatcacataattcaatataatta 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 30866210 - 30866150
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||| ||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  30866210 acacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 30298930 - 30299047
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcgg-acacgtctaatccgag 200  Q
    |||||||| |||| |||||||| ||||||||||||||||  | ||||||| || ||||||||||||||||| |||| |  ||| ||||||||||||||||    
T  30298930 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30299029  T
Q  201 gagtgtccgtgcttcata 218  Q
    ||||||||||||||||||    
T  30299030 gagtgtccgtgcttcata 30299047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 30327798 - 30327915
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcgg-acacgtctaatccgag 200  Q
    |||||||| |||| |||||||| ||||||||||||||||  | ||||||| || ||||||||||||||||| |||| |  ||| ||||||||||||||||    
T  30327798 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30327897  T
Q  201 gagtgtccgtgcttcata 218  Q
    ||||||||||||||||||    
T  30327898 gagtgtccgtgcttcata 30327915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 12895182 - 12895105
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 189  Q
    |||| |||| ||| |||||||||||||||| ||||||||| ||| |||||||||||||||| |||| | |||||||||    
T  12895182 acacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacg 12895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 24613761 - 24613702
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 11596438 - 11596360
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||||||| |||||| | || || ||| | |||||||||||||||| ||||||||| || |||||||||||||||    
T  11596438 gacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 12797412 - 12797339
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||| || |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  12797412 cggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 12797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 23293061 - 23292987
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  23293061 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 23292987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 24543957 - 24544035
Alignment:
Q  95 acggacaccggacactaacacaccgacacaactaataatttgaaaaagt-cacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||| |||||| |||| ||||||||||||||||||| ||||| | ||| |||| || |||||||||||||||||    
T  24543957 acggacaccagacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcg 24544035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 54580082 - 54580024
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| |||||||| ||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 19482654 - 19482719
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||| |  |||||||||||||||    
T  19482654 gacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 40481623 - 40481687
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 3947827 - 3947755
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 189  Q
    |||||||| |||||||||||||||| || |||||| || ||||||||||||||||  |||| | |||||||||    
T  3947827 ccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 3947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 21945501 - 21945561
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  21945501 ccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 21945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 715677 - 715615
Alignment:
Q  109 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  715677 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 753003 - 752941
Alignment:
Q  109 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  753003 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 4157112 - 4157207
Alignment:
Q  84 cggatgcggacacggacaccggacacta---acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||||||||||||| ||||| |   | |||| ||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  4157112 cggatacggacacggacaccagacacgacacagacactgacacaactaataatttgaaaaa-tcacataatttagtgcaattacaagtgtcggtgtc 4157207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 14126184 - 14126118
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    ||||||||||| |||||||   ||||||||||| ||||||||||||| || |||||||| |||||||    
T  14126184 gacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 29205451 - 29205497
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 35158060 - 35157986
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||| |||||||||||||| |||| |||||||||  | |||||||| |||||||| ||||    
T  35158060 cggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 2362041 - 2361976
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| |||||||||||||||| | |||||||  | |||||||| |||||||| ||||    
T  2362041 acacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc 2361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  120 acacaactaataatttgaaaaagtcacataatacaatgtaattaca 165  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 28964300 - 28964255
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 32273633 - 32273553
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||||||| || |||||  |||||| ||||||||||| | |||| || |||||||||||||||||||||| | |||||||    
T  32273633 atgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacacaactaataatttgaaaaaataacataat 32273553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 4383352 - 4383419
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||| ||||  ||| |||||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  4383352 cggacactgacacgtcgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaaatgtc 4383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 4383448 - 4383484
Alignment:
Q  182 cggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4383448 cggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 11110768 - 11110708
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataata 152  Q
    ||||||||||||||||||  |||| |||||||||  |||||||||||||  ||||||||||    
T  11110768 gacacggacaccggacacagacacgccgacacaaggaataatttgaaaatatcacataata 11110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 12884380 - 12884348
Alignment:
Q  186 cacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||||||||||||||||||||||||    
T  12884380 cacgtctaatccgaggagtgtccgtgcttcata 12884348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 16073373 - 16073452
Alignment:
Q  97 ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||| || |||| || |||||| ||||||||||||||| || |||||| || ||||||||||||||||| ||||    
T  16073373 ggacactggactctgacacgccaacacaagtaataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtc 16073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 20633469 - 20633536
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    |||||||| ||||  ||||||  ||||||||||||||||   ||||||| |||||||||||||||||||||    
T  20633469 cggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaattacaagtgtcgt 20633536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 28084514 - 28084574
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtc 171  Q
    |||| |||||||| |||| |||||||||||  ||||||||| |||||||||||||||||||    
T  28084514 acacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 31800544 - 31800484
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||||||| |||||||||| ||||| | | |||||  |||||||||||||||||||    
T  31800544 acacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcg 31800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 34306864 - 34306805
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  34306864 ccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtc 34306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 715581 - 715546
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  715581 ggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 752907 - 752872
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  752907 ggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 824252 - 824217
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||||||||||| |||||||||||||||    
T  824252 ggacacgtctaatccgaggactgtccgtgcttcata 824217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 5775340 - 5775305
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  5775340 ggacacgcctaatccgaggagtgtccgtgcttcata 5775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 14465041 - 14465006
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||||| |||||||||||||||||||||    
T  14465041 ggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 22440651 - 22440559
Alignment:
Q  127 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtccta---tcggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||||||| ||| ||||||||| || |||||||| | ||| ||| |||| |   | ||||||| |||||||||||||||||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtgacgt-gtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 23292962 - 23292927
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23292962 ggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 24613666 - 24613631
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24613666 ggacacgtctaatcctaggagtgtccgtgcttcata 24613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 35239202 - 35239237
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||||||||||||||||||||| |||||    
T  35239202 ggacacgtctaatccgaggagtgtccgtgcctcata 35239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 37203335 - 37203370
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||||||||| |||||||||||||||||    
T  37203335 ggacacgtctaatccgagaagtgtccgtgcttcata 37203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 38847078 - 38847019
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||| |||||||| |||||||||||||||| ||| || || || ||||||||||||||||    
T  38847078 acactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 49431009 - 49431084
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| | |||| |||||||| ||||||||||| ||||| ||||||||| || |||||||| |||||||| ||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtc 49431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 3064903 - 3064869
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgcttcata 3064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 17210069 - 17210039
Alignment:
Q  181 tcggacacgtctaatccgaggagtgtccgtg 211  Q
    |||||||||||||||||||||||||||||||    
T  17210069 tcggacacgtctaatccgaggagtgtccgtg 17210039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 27706251 - 27706185
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||||| ||||  |||||||| ||||||||| ||||| |||||||||  | |||||||||||||||    
T  27706251 ggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  127 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 12895340 - 12895275
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||||||||| ||||||||||||||| |||||||||    |||||||| |||||||| ||||    
T  12895340 acacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc 12895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 18844461 - 18844424
Alignment:
Q  181 tcggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  18844461 tcggacacgcctaatccgagaagtgtccgtgcttcata 18844424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 28084607 - 28084640
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttca 216  Q
    ||||||| ||||||||||||||||||||||||||    
T  28084607 ggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 37203239 - 37203315
Alignment:
Q  91 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||||||||||||||||| |   ||| |||||  |||||||||||||||| | |||||||  | |||||||||||||||    
T  37203239 ggacacggacaccggacacga---cacagacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 36635308 - 36635368
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    |||||||| |||| || |||| ||||||||||||| ||| ||||||||| || ||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 51701253 - 51701309
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||| |||||| |||||||||||||||| | |||||||  | |||||||||||||||    
T  51701253 acacggacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 9408420 - 9408328
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 184  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||| |||| ||||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 3991318 - 3991431
Alignment:
Q  113 cacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc---gttgtcctatc-----ggacacgtctaatccgaggagt 204  Q
    ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||   || ||| ||||     ||||||| ||||||||||||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtcgtatcgactgggacacgcctaatccgaggagt 3991417  T
Q  205 gtccgtgcttcata 218  Q
    ||||| ||||||||    
T  3991418 gtccgggcttcata 3991431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 35861951 - 35862069
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc------ctatcggacacgtctaatccga 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||  ||||      |    ||||||| |||||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgtcggacacgaggacacgcctaatccga 35862050  T
Q  200 ggagtgtccgtgcttcata 218  Q
    |||||||||||||||||||    
T  35862051 ggagtgtccgtgcttcata 35862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 11061151 - 11061077
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||  | | ||||||||||||||| ||||    
T  11061151 cggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 18215261 - 18215187
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| ||||| || |||||||||||||||| ||||||||| || |||| |||||||||||| ||||    
T  18215261 cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtc 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 24105631 - 24105731
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    ||||||||||||| ||||| |||||||| |||| ||||||| |||| |||||||| |||||||||||||||| |  ||| || || ||||||||||||||    
T  24105631 atgaagcacggatacggatacggacacg-acac-ggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtg 24105728  T
Q  170 tcg 172  Q
    |||    
T  24105729 tcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 27945025 - 27945136
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 202  Q
    |||||||| |||| ||||||| ||||||||||||| ||| | ||||||| || ||||||||||||||||| |||| |    | |||| ||||  ||||||    
T  27945025 cggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgt----gtcacgcctaactcgagga 27945120  T
Q  203 gtgtccgtgcttcata 218  Q
    ||||||||||||||||    
T  27945121 gtgtccgtgcttcata 27945136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 13770675 - 13770760
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 188  Q
    |||||||| | || |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||||||||| | ||||||||    
T  13770675 cggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacac 13770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 24339635 - 24339700
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 7438704 - 7438764
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  7438704 ccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 9778462 - 9778569
Alignment:
Q  84 cggatgcggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtccta 180  Q
    ||||| |||||||||||||||||||| | ||  |||| |||||| || ||||||||||||| ||||||||| || | ||||||||||||||| |||| |     
T  9778462 cggatacggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtg 9778561  T
Q  181 tcggacac 188  Q
    ||||||||    
T  9778562 tcggacac 9778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 25481895 - 25481953
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 5409910 - 5409825
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 189  Q
    ||||||| |||| | || ||| |||||||||||||||| ||||||||| || || |||||||||||||| |||| | |||||||||    
T  5409910 ggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg 5409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 8234139 - 8234196
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    |||||||||||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  8234139 acacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 32094093 - 32094009
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 189  Q
    |||||||||  || ||||||||||||||||||||||  ||||||||| || ||||||||||| ||||| |||| | |||||||||    
T  32094093 acactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacg 32094009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 43027576 - 43027470
Alignment:
Q  70 atgaagcacggatgcggatgc-ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    ||||||||||||||||||  | |||||| |||| |||||||| ||||  |||| || |||||||||||||||| ||||||||| || ||||| |||||||    
T  43027576 atgaagcacggatgcggacactggacac-gaca-cggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagt 43027479  T
Q  169 gtcgttgtc 177  Q
    |||| ||||    
T  43027478 gtcggtgtc 43027470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 1433542 - 1433577
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  1433542 ggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 11665528 - 11665441
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| ||| | | |||| | ||||||||||||||||||||||| ||||||||| || | |||||| |||||||| ||||    
T  11665528 cggatacggacactggatattgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 33994199 - 33994270
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||| ||||| |||||| ||||||||||| |||||||||| || || |||||||||||||| ||||    
T  33994199 acactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 11831404 - 11831481
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    |||| |||||||| |||||| | |||| |||||||||||||||||||||||| ||| |||||  | |||||||||||||    
T  11831404 cggatacggacactggacacga-cacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 26033513 - 26033467
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 7197363 - 7197298
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| |||||||||| ||||| |||  |||| |||||||||||||||||||| ||||    
T  7197363 acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtc 7197298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 18035839 - 18035806
Alignment:
Q  185 acacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||    
T  18035839 acacgtctaatccgaggagtgtccgtgcttcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 6630985 - 6630913
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||| ||||||| ||||||||||||| |||||||| |||| || |||||||| | |||||| ||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtc 6630913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 25822648 - 25822720
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 184  Q
    |||| |||||||||||||||||||||||||    || ||| || ||||||||||||||||| |||| ||||||    
T  25822648 acacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcgg 25822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 5409807 - 5409772
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  5409807 ggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 11272649 - 11272587
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcac--ataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||| ||||||||||||| ||||  ||||| || ||||||||||||||||| ||||    
T  11272649 ccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtc 11272587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 29763165 - 29763130
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29763165 ggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 40131975 - 40131940
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||| ||||||||||    
T  40131975 ggacacgtctaatccgaggagtgtctgtgcttcata 40131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 15680893 - 15680927
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||| ||||||||||||||||||||||    
T  15680893 gacacgtctaattcgaggagtgtccgtgcttcata 15680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 29763247 - 29763201
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  29763247 gacactgacacaccaacacaacttataatttgaaaaaatcacataat 29763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 43249977 - 43250047
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  43249977 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 43250047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 2334345 - 2334378
Alignment:
Q  185 acacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||| ||||||    
T  2334345 acacgtctaatccgaggagtgtccgtgtttcata 2334378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 21826259 - 21826304
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataa 150  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  21826259 gacactaacacgccgacacgactaataatttaaaaaaatcacataa 21826304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 30813882 - 30813915
Alignment:
Q  185 acacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||| ||||||||||||||||||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgcttcata 30813915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 7058429 - 7058477
Alignment:
Q  122 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||||||||||||||| |||  |||| || |||||||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 10042921 - 10042969
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||||| |||| ||||||| ||||||||||||| ||| |||||||||    
T  10042921 cggacacttacacgccgacaccactaataatttgataaattcacataat 10042969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 21560484 - 21560568
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaa-----aaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 184  Q
    |||||| |||| |||| ||| |||||||||||||     ||| ||||||||| || ||||||||||||||||| |||| ||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcgg 21560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 29787444 - 29787384
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    |||||| |||||| |||||||  |||||||||||| ||| ||||||||| || ||||||||    
T  29787444 cggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 40287422 - 40287363
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||| |||||||||| |||||||||||||| ||| || || || |||||||||||||||||    
T  40287422 acacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcg 40287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  133 tttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 32434798 - 32434723
Alignment:
Q  97 ggacaccggacactaacac-accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  32434798 ggacaccggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 22881689 - 22881568
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc--------ctatcggacacgtctaatc 196  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||        |    ||||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatc 22881590  T
Q  197 cgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||    
T  22881589 cgaggagtgtccgtgcttcata 22881568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 38078769 - 38078662
Alignment:
Q  70 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    ||||||||||||| ||||  ||||||| |||||| | ||||| ||||  ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  38078769 atgaagcacggatacggacacggacaccggacac-gaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagt 38078671  T
Q  169 gtcgttgtc 177  Q
    |||| ||||    
T  38078670 gtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 37598803 - 37598889
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||| |||||||| ||||    
T  37598803 cggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtc 37598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 48450662 - 48450551
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 202  Q
    |||||||| |||| || ||||| |||||||||||||||| | |||||||  | |||||||||||||||||  | |  |  ||||||||||||||||||||    
T  48450662 cggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg--gacaca--ggacacgtctaatccgagga 48450567  T
Q  203 gtgtccgtgcttcata 218  Q
    ||||||||||||||||    
T  48450566 gtgtccgtgcttcata 48450551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 31672979 - 31672896
Alignment:
Q  94 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| || ||||||| ||||||||||||| |||||||||||||||| |||| |||| || ||||||||||||| ||| ||||    
T  31672979 cacggatacgggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc 31672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 40258997 - 40258934
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 1705067 - 1704993
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||  ||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  1705067 cggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtc 1704993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 24334799 - 24334665
Alignment:
Q  85 ggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtcgttgtcctatcg 183  Q
    |||| ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||     |||||| || ||||||||||||||||| ||||  |       
T  24334799 ggatacggacacggacaccggacacggacacaccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtcggacac 24334700  T
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    | |||| ||||||| || |||||||||||||||||    
T  24334699 gtcacgcctaatccaagtagtgtccgtgcttcata 24334665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 24577245 - 24577187
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 28273147 - 28273083
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 183  Q
    |||||||||||| |||||||||| ||| ||||| || ||||||||||||||||| ||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcg 28273083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 1815241 - 1815316
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 178  Q
    |||||||| |||| ||||||||| |||| |||| ||||| ||||||||| || ||||||||||||||||| |||||    
T  1815241 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtcc 1815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 46348470 - 46348384
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  46348470 cggatacggacac-ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 46348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 113292 - 113350
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 1486768 - 1486698
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 189  Q
    |||||| |||||||||||||||| ||||||||| || |||||||| |||||||| |||| | |||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg 1486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 18556543 - 18556466
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    |||| |||||||| ||||||| |||| |||||||| |||||||||||||||  |||||||||  |||||||||||||||    
T  18556543 cggatacggacac-ggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 32461529 - 32461471
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||| ||| ||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  32461529 acacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 35702649 - 35702543
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc-----ctatcggacacgtctaatccgaggagtgtccgtg 211  Q
    |||||||| |||||||||||||||  ||| |||||  | ||||||||||||||||  ||||     | || ||||||| |||||||||||||||||||||    
T  35702649 ccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcggacacgatgggacacgcctaatccgaggagtgtccgtg 35702550  T
Q  212 cttcata 218  Q
    |||||||    
T  35702549 cttcata 35702543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 42359524 - 42359450
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  42359524 cggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 42359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 398878 - 398780
Alignment:
Q  70 atgaagcacggatgcggatgcggacac-ggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    ||||||||||||| |||| |||||||| ||||||    |||||||| |||| |||||||  |||||||||||||||| ||||||||| || ||||||||    
T  398878 atgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 21378571 - 21378631
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||||||| ||||||| |||||||| | ||||||| || |||||||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 47989484 - 47989555
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||| ||||||||| ||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  47989484 gacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 47989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 3490497 - 3490352
Alignment:
Q  70 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    ||||||||||||| ||||| | ||||| ||||||  |||||| |||| |||||||  |||||||||||| |||   |||| || || |||||||||||||    
T  3490497 atgaagcacggatacggatacagacaccggacac--gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagt 3490400  T
Q  169 gtcgttgtccta---tcggacacgtctaatccgaggagtgtccgtgctt 214  Q
    |||| ||||| |   | |||||| ||||||||||| |||||||||||||    
T  3490399 gtcg-tgtccgacattgggacacatctaatccgagaagtgtccgtgctt 3490352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 6332666 - 6332728
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  6332666 acacggacacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtatcggtgtc 6332728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 9828138 - 9828173
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  9828138 ggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 18190167 - 18190109
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 22515946 - 22515888
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 18337338 - 18337387
Alignment:
Q  128 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 18337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 38503304 - 38503385
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 184  Q
    |||||||||||||||||||||  |||||||||||| ||| ||| ||| | || |||||||| | |||||| |||||| ||||    
T  38503304 cggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcgg 38503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 51410022 - 51410083
Alignment:
Q  117 ccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| ||||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  51410022 ccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 51410083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 30359374 - 30359483
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagt 204  Q
    |||||| |||||||| ||||||| ||||||||||||| |||||||||  | ||||| | |||||||||     | |  ||||||| | |||| |||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg----acaacgggacacgccaaatctgaggagt 30359469  T
Q  205 gtccgtgcttcata 218  Q
    ||||||||||||||    
T  30359470 gtccgtgcttcata 30359483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  120 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||| |||||||||||| ||| ||||||||| || |||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 34298420 - 34298480
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    |||| ||| |||||||||||| ||||||||||||| ||| ||||||||| || ||||||||    
T  34298420 cggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 214
Target Start/End: Complemental strand, 5898242 - 5898211
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgctt 214  Q
    ||||||||||||||||||||||||||||||||    
T  5898242 ggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 6427459 - 6427516
Alignment:
Q  117 ccgacacaactaataatttg---aaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    ||||||||||||||||||||   ||||| ||||||||| |||||||| ||||||||||    
T  6427459 ccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtc 6427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 14359587 - 14359529
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  14359587 acacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 22947813 - 22947848
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcata 22947848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 37598914 - 37598949
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37598914 ggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 47989591 - 47989626
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  47989591 ggacacgcctaatccgaggagtgtccgtgcttcata 47989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 2288240 - 2288182
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    ||||||||||||||||||  | ||||||||| | ||| ||||||||| |||||||||||    
T  2288240 gacactaacacaccgacaacaataataatttaagaaaatcacataattcaatgtaatta 2288182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 5376575 - 5376501
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| |||||||  |||||||||| | ||| | ||||||| || |||||||| |||||||| ||||    
T  5376575 cggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtc 5376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 6612222 - 6612172
Alignment:
Q  127 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 6612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 16297257 - 16297223
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||| |||||||||||||||||||||||||||    
T  16297257 ggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 21366027 - 21365993
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgcttcata 21365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 22515862 - 22515828
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  22515862 gacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 42359425 - 42359391
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||| |||||||||||||||||||||||||||    
T  42359425 ggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 5927392 - 5927347
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||||||||||| ||| |||||  ||||||||||||||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 9828019 - 9828087
Alignment:
Q  93 acacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 162  Q
    |||| |||||||||||| | ||| ||||||| ||||||||||||| ||| ||||||||| || |||||||    
T  9828019 acacagacaccggacacga-cacgccgacaccactaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 19058922 - 19058857
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| |||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 19058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 35919370 - 35919265
Alignment:
Q  90 cggacacggacac-cggacactaacacaccgacacaactaataatttg-----aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 183  Q
    ||||||| ||||| ||||||| ||||| |||||||| |||||||||||     ||||| ||||||||| || |||||||| |||||||  |||| | |||    
T  35919370 cggacactgacacacggacaccaacactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcg 35919271  T
Q  184 gacacg 189  Q
    ||||||    
T  35919270 gacacg 35919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 36878427 - 36878519
Alignment:
Q  84 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| ||||||||||||  | ||||| |||| |||||||  |||||||||||| ||| ||||||||| || |||||||| | |||||| ||||    
T  36878427 cggatacggacacggacatag-acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 2283669 - 2283717
Alignment:
Q  122 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||| ||||||||||||| |||||| || ||||||||||| ||||||    
T  2283669 acaacttataatttgaaaaaatcacatgattcaatgtaattataagtgt 2283717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 6427334 - 6427394
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    |||||||| |||| || ||||  |||||||||||| ||| ||||||||| |||||||||||    
T  6427334 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatta 6427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 9103624 - 9103672
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 9103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 16812527 - 16812575
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||||| |||||||||||| | ||||||||||| ||| |||||||||    
T  16812527 cggacactgacacaccgacaccaataataatttgacaaaatcacataat 16812575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 17778549 - 17778604
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||||||||||||||| ||||   ||||| ||||||||||||||||| ||||    
T  17778549 gacacagctaataatttgaaaaaatcac---atacagtgtaattacaagtgtcggtgtc 17778604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 19536473 - 19536362
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagg 201  Q
    |||||| | |||| ||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||     ||||||||| |||||||||||    
T  19536473 cggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg-----tcggacacgcctaatccgagg 19536379  T
Q  202 agtgtccgtgcttcata 218  Q
    ||||||| |||||||||    
T  19536378 agtgtccatgcttcata 19536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 21374807 - 21374706
Alignment:
Q  70 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||| |||||||| |||||||||||||||| | ||||||| || |||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacac-ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagt 21374709  T
Q  169 gtc 171  Q
    |||    
T  21374708 gtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 20539749 - 20539633
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg-gacacgtctaatccgagg 201  Q
    |||||||| ||||  ||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| |||| |  || |||||| || ||||||||    
T  20539749 cggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtggcgagacacgcctgatccgagg 20539650  T
Q  202 agtgtccgtgcttcata 218  Q
    |||||||||||||||||    
T  20539649 agtgtccgtgcttcata 20539633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 37558949 - 37559035
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||| ||||||| |||| |||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||    
T  37558949 cggatacggacac-ggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 15657848 - 15657922
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||||||| || ||||||||||| ||||| ||||    
T  15657848 cggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtc 15657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 18256046 - 18255945
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtg 211  Q
    |||||| ||||||  ||||||||| ||||| |||||||||  |||||||||| |||||||| ||||     ||||||| ||||||| |||||||||||||    
T  18256046 acacactgacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtc-----ggacacgcctaatccaaggagtgtccgtg 18255952  T
Q  212 cttcata 218  Q
    |||||||    
T  18255951 cttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 30717605 - 30717531
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| ||| ||||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  30717605 cggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 30717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 15972857 - 15972931
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||| ||||||||||||||| | ||| ||| || ||||||||||||||||| ||||    
T  15972857 cggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtc 15972931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 18421947 - 18422021
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||| ||||||||| ||||  ||||||||| || ||||||||||||||||| ||||    
T  18421947 cggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtc 18422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 24894363 - 24894486
Alignment:
Q  94 cacggacac-cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtct 192  Q
    ||||||||| |||||||| |||| |||||||| |||||||||| ||||| ||||||||| || || ||||| |||||| | | || | ||||||||  ||    
T  24894363 cacggacacacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgtcggacac--ct 24894460  T
Q  193 aatccgaggagtgtccgtgcttcata 218  Q
    ||| | ||||||| ||||||||||||    
T  24894461 aattcaaggagtgcccgtgcttcata 24894486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 30335401 - 30335475
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||| ||| ||||||||||||||||||||||||| | |||||||  | ||||||||||| ||||| ||||    
T  30335401 cggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtc 30335475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 6940239 - 6940308
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||| |||||||| |||||||||| ||||||| |||||||  | |||||||||||||||||    
T  6940239 cggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 18841087 - 18841014
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| |||| | ||||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 23718010 - 23718079
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  23718010 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 24105682 - 24105751
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  24105682 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 30404925 - 30404856
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||| |||||||   ||||||||||||||| ||||||||| || |||||||||||||||||    
T  30404925 cggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 20473320 - 20473380
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||| ||||| ||| ||||| || ||||||||||||||||| ||||    
T  20473320 ccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtc 20473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 974746 - 974805
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||||||||||||  |||||| || || ||||||||||||||||| ||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtc 974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 37419714 - 37419793
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    |||| |||||||||||||||| |||| ||||||   | |||||||||||||| ||||| ||| || ||||||||||||||    
T  37419714 cggatacggacaccggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 37419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 2438778 - 2438720
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 2438720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 26769471 - 26769569
Alignment:
Q  84 cggatgcggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||||||||||||||||||| |     |||| ||||||||||||||||||||||||  |||||| ||    ||||||||||||||||| ||||    
T  26769471 cggatacggacacggacaccggacacgacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 12668489 - 12668424
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||| |||||||||||||||||| | ||||||| || |||||||| |||||||| ||||    
T  12668489 acacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||||||||||||||||| ||| ||||| || ||||||||||| |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 38117232 - 38117167
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||| | |  |||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 34691857 - 34691770
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||| ||| ||| ||||| || |||||||| | |||||| ||     ||||||||| ||||||||||||||||||||| ||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 34714269 - 34714182
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||| ||| ||| ||||| || |||||||| | |||||| ||     ||||||||| ||||||||||||||||||||| ||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 36756417 - 36756345
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| ||||  ||||||||||||||||||||| || | ||||||| || |||||||| |||||||| ||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtc 36756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 5040730 - 5040792
Alignment:
Q  117 ccgacacaactaataatttgaaaaag--tcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||| ||||||||||||||||   ||||||||| |||||||||||||||||||| ||||    
T  5040730 ccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 5040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 14996330 - 14996213
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagt 168  Q
    ||||||||||||| |||| || |||| | |||| ||||||| |||  |||||||| |||||||||||| |||| ||| |||||  | |||||||||||||    
T  14996330 atgaagcacggatacggacgcagacatg-acac-ggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagt 14996233  T
Q  169 gtcgttgtcctatcggacac 188  Q
    |||| |||| | ||||||||    
T  14996232 gtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 23058518 - 23058443
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| | |||| || |||||| |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23058518 cggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 23058443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 26769605 - 26769640
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  26769605 ggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 37419837 - 37419872
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37419837 ggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 42511358 - 42511323
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 2438695 - 2438661
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    ||||||| |||||||||||||||||||||||||||    
T  2438695 ggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 11223922 - 11223864
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||||| ||||||||| | ||||||| || ||||||||||||||||| ||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 28596550 - 28596587
Alignment:
Q  181 tcggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  28596550 tcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 29176566 - 29176501
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||| |||| | ||||||  |||||||||||||| |||||||||| || |||||||| ||||||    
T  29176566 gacacttacacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgt 29176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 21091707 - 21091775
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||| ||||||||||||  |||||||||| | ||| | ||||| | || ||||||||||||||||    
T  21091707 cggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 17835 - 17749
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 178  Q
    |||||||||| |||||| |||||| | ||||||||||||||||||||||| |||||||||  | ||||||||||||||||| |||||    
T  17835 gacacggacatcggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcc 17749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 46628 - 46775
Alignment:
Q  70 atgaagcacggatgcggatgcggaca-cggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 164  Q
    ||||||||||||| ||||  |||||| |||||||    |||||| | |||| ||||||||  ||||||||||||||| ||||||||| || |||||||||    
T  46628 atgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattac 46727  T
Q  165 aagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    || ||||| ||||      |||||| ||||||||||||||||||||||||||||    
T  46728 aaatgtcggtgtc------gacacgcctaatccgaggagtgtccgtgcttcata 46775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 25948939 - 25948848
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    |||||||||||||||| ||||||||| || |||||||| |||||| | |||| | |||||||||| |||||| |||| ||||||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacgtgtaatccaaggaatgtccgtgcttcat 25948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 34910289 - 34910382
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 184  Q
    |||| ||||||||| ||||| | ||| ||||||||||||||||||||||||| ||||||||| || |||||||||||| |||| |||| ||||||    
T  34910289 cggatacggacaccagacacga-cacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcgg 34910382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 10954939 - 10955010
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| || |||||| |||||||||| ||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtc 10955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 10335361 - 10335287
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  10335361 cggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 10335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 21257045 - 21256952
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgcttc 215  Q
    |||||| |||||||||||||||| ||||||||| || | ||||||||||||||| | || |   ||||||  |||||||||||||||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgt---ggacacacctaatccgaggagtgtccgtgcttc 21256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 55401059 - 55401133
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| | || ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  55401059 cggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 55401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 14209106 - 14209165
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||| ||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 20503451 - 20503518
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||| |||| |||||||||| |||||||||||||| | ||||||| || |||||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 8587096 - 8587022
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| ||| |||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8587096 cggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtc 8587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 25775481 - 25775567
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaa-agtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||| ||||||| |||| || |||||  |||||||||||||| | ||||||||| || ||||||||||||||||| ||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtc 25775567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 28917985 - 28918059
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28917985 cggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 14216845 - 14216944
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    ||||||||||||||||||  | |||||| |||| ||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||    
T  14216845 atgaagcacggatgcggacacagacacg-acac-ggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtg 14216942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 14222974 - 14223073
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    ||||||||||||||||||  | |||||| |||| ||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||    
T  14222974 atgaagcacggatgcggacacagacacg-acac-ggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtg 14223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 21479079 - 21479176
Alignment:
Q  85 ggatgcggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||||||||||||||| |     |||| |||||||| |||||||||||||||| ||||| ||| || ||||||||| ||||||| ||||    
T  21479079 ggatacggacacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 26508110 - 26508163
Alignment:
Q  119 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 28812508 - 28812573
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||||||||||||||||| || ||||||||| || |||| |||||||||||| ||||    
T  28812508 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 28812573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 39756188 - 39756294
Alignment:
Q  70 atgaagcacggatgcggatgcggaca-cggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 168  Q
    |||||||||||||  |||| |||||| |||||||  |||||| |||| |||||| || ||||||||| ||||| |||||||||  ||| |||||||||||    
T  39756188 atgaagcacggatatggatacggacatcggacac--gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagt 39756285  T
Q  169 gtcgttgtc 177  Q
    |||| ||||    
T  39756286 gtcggtgtc 39756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 49651847 - 49651778
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggac 186  Q
    |||||||  |||||||||||||||| ||||||||| || ||||||||||||||||| |||| | ||||||    
T  49651847 ccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 7928445 - 7928536
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgt 210  Q
    ||||||||||  |||||||||||||||| ||||||||| || |||||||| | |||||| ||     ||||||||| |||||| |||||||||||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatctgaggagtgtccgt 7928536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 10318119 - 10318064
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacat 148  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||    
T  10318119 gacacggacac-ggacactgacacgccgacacagctaataatttgaaaaagtcacat 10318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 14747513 - 14747610
Alignment:
Q  70 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaag 167  Q
    ||||||||||||| ||||| ||||||| ||||||  |||||| |||| |||||||| ||||||||||| ||||| |||||||||  | ||||||||||||    
T  14747513 atgaagcacggatacggatacggacaccggacac--gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14829676 - 14829747
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  14829676 gacactgacacgccgacacagctaataatttgaaaaa-tcacataattcatggtaattacaagtgtcggtgtc 14829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 16000089 - 16000017
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||| ||||||||||||||||||| ||||| | ||||||| || ||||| ||||||||||| ||||    
T  16000089 gacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtc 16000017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 21305218 - 21305290
Alignment:
Q  92 gacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaatta 163  Q
    |||||||||||| ||||||||||| |||||||  ||||||||||| ||||| |||||||||  ||||||||||    
T  21305218 gacacggacaccagacactaacacgccgacacctctaataatttgaaaaaaatcacataattaaatgtaatta 21305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 35994798 - 35994743
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  35994798 ccgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcgt 35994743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 1509534 - 1509597
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  1509534 acactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    ||||||| |||| ||||||||  ||||||||||||||| |||||||||  | ||||||||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 14832092 - 14832151
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||| |||| ||| |||||||||||||||| ||||||||  |||||||||||||||||||    
T  14832092 acacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtc 14832151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 34910400 - 34910435
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  34910400 ggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 51206417 - 51206354
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||| |||||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  51206417 acactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtc 51206354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 8413029 - 8412972
Alignment:
Q  94 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| |||  ||||||||    
T  8413029 cacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataat 8412972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 32400798 - 32400715
Alignment:
Q  85 ggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||| |||||||| |||||||||||| ||||  ||||||| |||||||||||||||  | |||||||    ||||||||||||||||    
T  32400798 ggatacggacacgaacaccggacactgacacggcgacacagctaataatttgaaaagattacataat---ttgtaattacaagtgtc 32400715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 41961723 - 41961651
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| |||| ||| ||||||||||||||||||||  |||||| || |  ||||||||||||||||| ||||    
T  41961723 gacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtc 41961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 750678 - 750619
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||||||||||||  ||||||||| |  || |||||||||||||| ||||    
T  750678 cgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtc 750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 4990948 - 4990913
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcata 4990913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 20503548 - 20503583
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20503548 ggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 34185088 - 34185053
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  34185088 ggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 8789523 - 8789489
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  8789523 gacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 8842413 - 8842447
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcata 8842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 15796369 - 15796295
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||| | |||| ||||||||  ||||||||||||||| ||| ||||| || ||||||||||| ||||| ||||    
T  15796369 cggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 24205116 - 24205046
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  24205116 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 24205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 26492280 - 26492206
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||| | |||||||||||||||| ||| | ||| || ||||||||||||| ||| ||||    
T  26492280 cggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtc 26492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 40052318 - 40052364
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 151  Q
    |||||| |||| |||||||| |||||||||||||||| |||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 40052364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 55401159 - 55401193
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 14979179 - 14979224
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 162  Q
    |||||||| |||||||||||||||| ||||||||| || |||||||    
T  14979179 ccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 34185189 - 34185124
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||||||  |||||||||| ||||| ||||| ||| || ||||||||||||||||| ||||    
T  34185189 acacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtc 34185124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 3164085 - 3164033
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||||| |||||||||||||||| ||||||||| || |||||  ||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 17005693 - 17005625
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||| || |||| |||| ||||||||||||| ||| ||| ||||| || |||||||| ||||||||    
T  17005693 ggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 27505244 - 27505304
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| ||||||||||  |||| |||||||||  | ||||||||||||||||| ||||    
T  27505244 ccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtc 27505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 29508437 - 29508497
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||| || ||||||||||||||||| ||| ||||| || |||||||| | ||||||    
T  29508437 acacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 22651960 - 22652034
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||| ||||    
T  22651960 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtc 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 36450841 - 36450762
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||| |||||||| ||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  36450841 cggatacggacac-ggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 30271371 - 30271300
Alignment:
Q  98 gacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    ||||||||||||| |||| |||||||| ||||| |||||||||| ||||||||| || ||||||||||||||    
T  30271371 gacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 15816204 - 15816130
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||  | |||||||| |||||||| ||||    
T  15816204 cggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtc 15816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 4298956 - 4298887
Alignment:
Q  108 actaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  4298956 actaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 25566789 - 25566899
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacacta---acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 166  Q
    ||||||||||||| |||||   ||||| |||||||||||  |   | |||| |||||| |||||||||||||||| ||||||||| || |||||||||||    
T  25566789 atgaagcacggatacggatatagacacagacaccggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaa 25566888  T
Q  167 gtgtcgttgtc 177  Q
    |||||| ||||    
T  25566889 gtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 29447170 - 29447111
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 18170557 - 18170483
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18170557 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 18634125 - 18634051
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18634125 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 22197815 - 22197749
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 24613509 - 24613578
Alignment:
Q  107 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaaa-tcacataattaagtgtaattacaagtgtcggtgtc 24613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 4948657 - 4948710
Alignment:
Q  124 aactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 13437038 - 13436965
Alignment:
Q  104 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| ||  ||||| |||||||||| ||||    
T  13437038 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtc 13436965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 25192422 - 25192353
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||| |||||||| |||||||||||||||||| ||||||| || | |||||| ||||||||    
T  25192422 cggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 29510379 - 29510310
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||    
T  29510379 cggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 31514867 - 31514972
Alignment:
Q  114 acaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgc 212  Q
    |||| |||||||||||||||||||||||  ||||||||| ||  |||| ||||||||| | |||   |   |||||| ||||||||||||||||||||||    
T  31514867 acactgacacaactaataatttgaaaaaaatcacataattcagcgtaactacaagtgttggtgttggacacgacacgcctaatccgaggagtgtccgtgc 31514966  T
Q  213 ttcata 218  Q
    ||||||    
T  31514967 ttcata 31514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 2572116 - 2572057
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  2572116 cgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 2572057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 8342967 - 8343030
Alignment:
Q  114 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 8343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 8343309 - 8343368
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    ||||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||    
T  8343309 acacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 22652070 - 22652105
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  22652070 ggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 5813576 - 5813650
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||  |||| |||||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  5813576 cggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 5813650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 20873053 - 20873127
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||| |  ||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  20873053 cggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 20873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 11803355 - 11803388
Alignment:
Q  185 acacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||||    
T  11803355 acacgtctaatccgaggagtgtccgtgcttcata 11803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 21465391 - 21465463
Alignment:
Q  95 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||||||||||||| |   ||| |||||| |||||||||||||||| ||| ||||| | ||||||||||||||||    
T  21465391 acggacaccggacacga---cacggacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgt 21465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  106 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||| |||| |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 34897092 - 34897179
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||| ||| ||||||||| || |||||||| | |||||| ||     |||||||| | |||| ||||||||||||||||||||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatg-----tcggacacatgtaattcgaggagtgtccgtgcttcata 34897179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 41832001 - 41831945
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    ||||||||  ||||||||||||||| ||||||||| || ||||| ||||||||||||    
T  41832001 ccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgt 41831945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 18407717 - 18407772
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||| |||||||||  ||||| ||||||||| || |||||||||||||||||    
T  18407717 ccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 24413535 - 24413500
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    |||||||||||||||||| |||||||||||||||||    
T  24413535 ggacacgtctaatccgagaagtgtccgtgcttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 218
Target Start/End: Complemental strand, 27067263 - 27067232
Alignment:
Q  187 acgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||||||||||||    
T  27067263 acgtctaatccgaggagtgtccgtgcttcata 27067232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 28745505 - 28745556
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||| ||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtc 28745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 37283791 - 37283756
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37283791 ggacacgtctaatccgaggagtgcccgtgcttcata 37283756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 31556985 - 31557054
Alignment:
Q  107 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| |||| ||||||||  ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  31556985 cactgacacgccgacacagttaataatttgaaaaa-tcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 3025635 - 3025668
Alignment:
Q  184 gacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    |||||| |||||||||||||||||||||||||||    
T  3025635 gacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 13203700 - 13203733
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttca 216  Q
    |||||| |||||||||||||||||||||||||||    
T  13203700 ggacacatctaatccgaggagtgtccgtgcttca 13203733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 30077439 - 30077394
Alignment:
Q  126 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 17468568 - 17468516
Alignment:
Q  118 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    ||||||||| ||||||||| |||| ||||||||| |  |||||||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgt 17468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 24196672 - 24196628
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcaca 147  Q
    |||||||  |||| ||||||||||||||||||||||||| |||||    
T  24196672 cggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 31236643 - 31236583
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||| |||||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 36934654 - 36934714
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 163  Q
    |||||||||||||  ||||||  ||||||||| |||||| ||||||||| || ||||||||    
T  36934654 cggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  128 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 44067502 - 44067570
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    |||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  44067502 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 44067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 20156 - 20278
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatc----ggacacgtctaatccg 198  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||  |||| | ||    ||||||| ||||||||    
T  20156 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgggacacgcctaatccg 20255  T
Q  199 aggagt---gtccgtgcttcata 218  Q
    ||||||   ||||||||||||||    
T  20256 aggagtacagtccgtgcttcata 20278  T

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Target: scaffold0103 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 51795 - 51862
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  51795 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 14523 - 14580
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 178894 - 178825
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtc 171  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  178894 cggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 13384 - 13458
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  13384 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 13458  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 21943 - 21869
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  21943 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 21869  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 225343 - 225273
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 173  Q
    |||||||| |||| ||||||||  ||||||||||| ||| | ||||||||||||||||||| |||||||||    
T  225343 cggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgt 225273  T

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Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 19562 - 19626
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  19562 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 8003 - 8067
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||    
T  8003 acacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtc 8067  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 23740 - 23828
Alignment:
Q  90 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||| ||| |||||||||||| |||||| | ||||  |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23740 cggatacgaacaccggacactgacacactgtcacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 23828  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 4953 - 4891
Alignment:
Q  109 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  4953 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0793; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 4857 - 4822
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4857 ggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

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Target: scaffold0652 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 537 - 463
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| | || |||||||  |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  537 cggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 463  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 8782 - 8856
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| || ||  | ||||||||||||||||| ||||    
T  8782 cggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc 8856  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 10546 - 10509
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaa 140  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10546 cggacactaacacaccgacacagctaataatttgaaaa 10509  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 92791 - 92859
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    |||||||| |||| |||||||  |||||||||||| ||| | ||||||| || ||||||||||||||||    
T  92791 cggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 92905 - 92940
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  92905 ggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 3391 - 3426
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcata 218  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3391 ggacacgcctaatccgaggagtgtccgtgcttcata 3426  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 23373 - 23490
Alignment:
Q  70 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 169  Q
    ||||||||||||| ||||  ||||||| |||| | |||||| |||| ||||||||  |||||| |  ||||| ||||||||| || |||||||| |||||    
T  23373 atgaagcacggatacggacacggacac-gaca-cagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtg 23470  T
Q  170 tcgttgtcctatcggacacg 189  Q
    ||| |||| | |||||||||    
T  23471 tcggtgtcgtgtcggacacg 23490  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 130480 - 130535
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 172  Q
    ||||||||  ||||| ||||||||| ||||||||| || |||||||||||||||||    
T  130480 ccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 7377 - 7319
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 170  Q
    |||| |||||||||||||||||||| |||| |||||||||  | |||||||| ||||||    
T  7377 acacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 33429 - 33375
Alignment:
Q  112 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 166  Q
    |||| |||||||| |||||||||||||||| | ||||||| || |||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 9712 - 9678
Alignment:
Q  183 ggacacgtctaatccgaggagtgtccgtgcttcat 217  Q
    |||||||| ||||||||||||||||||||||||||    
T  9712 ggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 241578 - 241652
Alignment:
Q  103 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    |||||||| |||| |||||||| ||||||||||| |||| |||||||||  | ||||||||  ||||||| ||||    
T  241578 cggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtc 241652  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 8696 - 8636
Alignment:
Q  117 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||||||||||||||||||||||  ||||||||| |  | ||||||||| ||||| ||||    
T  8696 ccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtc 8636  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 3900 - 3856
Alignment:
Q  127 taataatttgaaaaagtcacataatacaatgtaattacaagtgtc 171  Q
    ||||||||| ||||| ||||||||| || ||||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtc 3856  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 135385 - 135313
Alignment:
Q  105 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 177  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||||| |  |||||||| | |||||| ||||    
T  135385 gacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

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