View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8675_low_12 (Length: 251)

Name: NF8675_low_12
Description: NF8675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8675_low_12
NF8675_low_12
[»] chr4 (92 HSPs)
chr4 (63-244)||(14449416-14449598)
chr4 (130-242)||(12719579-12719691)
chr4 (130-242)||(21597536-21597648)
chr4 (63-244)||(44356530-44356709)
chr4 (65-242)||(51362539-51362719)
chr4 (130-242)||(2654103-2654215)
chr4 (139-242)||(43074722-43074825)
chr4 (63-242)||(53312287-53312467)
chr4 (63-242)||(2836900-2837079)
chr4 (63-227)||(10059846-10060012)
chr4 (130-242)||(2016859-2016970)
chr4 (130-238)||(20112288-20112396)
chr4 (63-242)||(25909488-25909667)
chr4 (130-242)||(1420678-1420790)
chr4 (130-242)||(29697590-29697701)
chr4 (133-238)||(4796178-4796283)
chr4 (130-235)||(23759715-23759820)
chr4 (130-242)||(6637197-6637309)
chr4 (59-242)||(21871521-21871701)
chr4 (59-242)||(21927382-21927562)
chr4 (63-239)||(54855305-54855480)
chr4 (130-243)||(11824257-11824368)
chr4 (85-243)||(27978715-27978872)
chr4 (65-231)||(47999533-47999698)
chr4 (158-242)||(49185665-49185749)
chr4 (130-251)||(51371531-51371655)
chr4 (130-239)||(14016793-14016902)
chr4 (65-242)||(16292273-16292448)
chr4 (130-242)||(31553376-31553488)
chr4 (133-239)||(21322848-21322954)
chr4 (144-242)||(34567750-34567848)
chr4 (130-240)||(54983969-54984079)
chr4 (65-242)||(50769366-50769543)
chr4 (134-226)||(1571467-1571559)
chr4 (146-226)||(20118053-20118133)
chr4 (130-242)||(21451526-21451637)
chr4 (130-232)||(6207318-6207420)
chr4 (180-242)||(6614978-6615040)
chr4 (63-206)||(14060873-14061016)
chr4 (130-243)||(51233548-51233661)
chr4 (63-242)||(52462922-52463100)
chr4 (133-218)||(8965674-8965759)
chr4 (149-240)||(8070712-8070803)
chr4 (66-173)||(14060760-14060865)
chr4 (140-239)||(53924888-53924987)
chr4 (164-242)||(35393402-35393480)
chr4 (129-230)||(5344337-5344438)
chr4 (130-239)||(26089538-26089646)
chr4 (129-242)||(34158606-34158719)
chr4 (129-234)||(35083722-35083827)
chr4 (138-230)||(35383905-35383997)
chr4 (130-243)||(42526096-42526196)
chr4 (129-234)||(55586683-55586788)
chr4 (129-209)||(33167979-33168059)
chr4 (175-242)||(18937374-18937441)
chr4 (63-186)||(53924748-53924870)
chr4 (129-230)||(104267-104368)
chr4 (129-230)||(6386798-6386899)
chr4 (129-230)||(7666343-7666444)
chr4 (63-116)||(19909174-19909227)
chr4 (129-230)||(28981980-28982081)
chr4 (129-242)||(38371397-38371510)
chr4 (129-230)||(41707785-41707886)
chr4 (129-226)||(51696603-51696700)
chr4 (129-230)||(52114202-52114303)
chr4 (129-234)||(54216098-54216203)
chr4 (129-230)||(54606954-54607055)
chr4 (129-213)||(44271841-44271925)
chr4 (129-244)||(27751295-27751410)
chr4 (130-196)||(37831660-37831726)
chr4 (129-244)||(37973580-37973695)
chr4 (129-192)||(55732635-55732698)
chr4 (65-111)||(20737499-20737545)
chr4 (63-109)||(21451460-21451506)
chr4 (188-234)||(31250604-31250650)
chr4 (129-242)||(45289632-45289746)
chr4 (160-242)||(50513143-50513225)
chr4 (188-230)||(51537761-51537803)
chr4 (130-196)||(52865448-52865514)
chr4 (130-186)||(2837089-2837146)
chr4 (129-230)||(8891721-8891822)
chr4 (130-171)||(10059751-10059792)
chr4 (129-234)||(17262157-17262262)
chr4 (129-230)||(29432192-29432293)
chr4 (181-242)||(34771406-34771467)
chr4 (129-230)||(39136442-39136543)
chr4 (133-186)||(50769553-50769606)
chr4 (129-234)||(52045857-52045962)
chr4 (129-209)||(6033780-6033859)
chr4 (129-213)||(29775427-29775511)
chr4 (129-209)||(33166403-33166483)
chr4 (188-244)||(41205627-41205683)
[»] chr1 (85 HSPs)
chr1 (63-244)||(3377502-3377683)
chr1 (130-240)||(17760752-17760862)
chr1 (73-242)||(44672326-44672492)
chr1 (130-242)||(23220634-23220746)
chr1 (141-232)||(41997785-41997876)
chr1 (130-239)||(16874640-16874749)
chr1 (130-239)||(50401439-50401547)
chr1 (63-242)||(32295087-32295266)
chr1 (145-242)||(46505304-46505401)
chr1 (133-242)||(25486285-25486393)
chr1 (130-235)||(39642349-39642454)
chr1 (130-242)||(14978864-14978976)
chr1 (139-242)||(16298191-16298294)
chr1 (130-224)||(8301497-8301591)
chr1 (130-244)||(30849362-30849476)
chr1 (141-242)||(12960979-12961080)
chr1 (145-242)||(46912325-46912422)
chr1 (130-242)||(7579732-7579844)
chr1 (130-242)||(15659125-15659237)
chr1 (130-242)||(46572894-46573004)
chr1 (130-225)||(6569658-6569753)
chr1 (130-228)||(18632383-18632481)
chr1 (63-230)||(45738937-45739103)
chr1 (145-243)||(49426126-49426223)
chr1 (130-214)||(8009796-8009880)
chr1 (134-238)||(50226529-50226633)
chr1 (129-242)||(6320630-6320741)
chr1 (133-242)||(20224665-20224773)
chr1 (153-214)||(23891797-23891858)
chr1 (130-239)||(25085530-25085639)
chr1 (146-242)||(5287361-5287457)
chr1 (146-230)||(14190688-14190772)
chr1 (141-240)||(1853591-1853688)
chr1 (131-225)||(1096536-1096630)
chr1 (144-238)||(46880880-46880974)
chr1 (129-242)||(4243197-4243310)
chr1 (129-234)||(6183049-6183154)
chr1 (129-230)||(33811492-33811593)
chr1 (129-242)||(33870961-33871074)
chr1 (129-230)||(34988157-34988258)
chr1 (129-213)||(21259892-21259976)
chr1 (130-238)||(44436825-44436932)
chr1 (129-224)||(17692793-17692887)
chr1 (129-244)||(42406950-42407065)
chr1 (177-239)||(7061365-7061427)
chr1 (129-234)||(38622470-38622575)
chr1 (138-244)||(48319479-48319585)
chr1 (129-226)||(14887-14984)
chr1 (65-110)||(12961110-12961155)
chr1 (129-230)||(13791643-13791744)
chr1 (169-242)||(23480049-23480121)
chr1 (129-230)||(28503202-28503303)
chr1 (129-230)||(41585352-41585453)
chr1 (129-234)||(43677170-43677275)
chr1 (129-234)||(43914645-43914750)
chr1 (129-230)||(47113455-47113556)
chr1 (129-229)||(8770609-8770709)
chr1 (133-209)||(39277097-39277173)
chr1 (129-213)||(51462971-51463055)
chr1 (130-197)||(3612172-3612238)
chr1 (129-244)||(22204372-22204487)
chr1 (129-244)||(45885080-45885195)
chr1 (129-244)||(52149584-52149699)
chr1 (188-234)||(20287889-20287935)
chr1 (129-227)||(26861341-26861439)
chr1 (188-234)||(47764217-47764263)
chr1 (129-230)||(11204574-11204675)
chr1 (199-244)||(12071780-12071825)
chr1 (129-230)||(14460447-14460548)
chr1 (129-230)||(19830175-19830276)
chr1 (129-242)||(23356760-23356873)
chr1 (129-242)||(39427478-39427591)
chr1 (129-230)||(40355915-40356016)
chr1 (129-234)||(44847055-44847160)
chr1 (160-209)||(50877724-50877773)
chr1 (129-209)||(4476108-4476188)
chr1 (63-115)||(5287835-5287887)
chr1 (188-244)||(8029085-8029141)
chr1 (198-242)||(18216813-18216857)
chr1 (188-240)||(20017508-20017560)
chr1 (129-229)||(36139503-36139603)
chr1 (130-174)||(48319608-48319652)
chr1 (188-244)||(49056250-49056306)
chr1 (129-209)||(50504658-50504738)
chr1 (63-115)||(51250486-51250538)
[»] chr5 (71 HSPs)
chr5 (63-239)||(27904620-27904796)
chr5 (64-242)||(20629878-20630057)
chr5 (63-242)||(32391853-32392032)
chr5 (64-242)||(37897852-37898029)
chr5 (63-242)||(3333835-3334014)
chr5 (131-242)||(2974702-2974813)
chr5 (130-242)||(22300668-22300780)
chr5 (131-242)||(12406174-12406285)
chr5 (130-241)||(36798239-36798349)
chr5 (130-243)||(40276162-40276275)
chr5 (130-240)||(31080544-31080654)
chr5 (130-242)||(9852854-9852966)
chr5 (130-238)||(35166363-35166471)
chr5 (143-242)||(3999232-3999331)
chr5 (130-240)||(26702504-26702613)
chr5 (130-240)||(26972237-26972346)
chr5 (65-240)||(20512197-20512374)
chr5 (140-240)||(39574316-39574413)
chr5 (130-242)||(25910791-25910903)
chr5 (130-215)||(19131661-19131746)
chr5 (130-242)||(19340898-19341010)
chr5 (65-242)||(18402989-18403166)
chr5 (130-241)||(16132812-16132923)
chr5 (63-242)||(24779276-24779453)
chr5 (163-244)||(6130390-6130470)
chr5 (149-242)||(26563075-26563168)
chr5 (65-230)||(24405493-24405657)
chr5 (130-242)||(25363893-25364005)
chr5 (130-242)||(30604221-30604333)
chr5 (138-242)||(34320081-34320185)
chr5 (130-242)||(43098161-43098272)
chr5 (145-239)||(28446087-28446181)
chr5 (129-230)||(7219565-7219666)
chr5 (129-230)||(10029217-10029318)
chr5 (129-234)||(39528833-39528938)
chr5 (129-213)||(38163578-38163662)
chr5 (188-234)||(35678225-35678271)
chr5 (129-226)||(223043-223140)
chr5 (129-230)||(4096519-4096619)
chr5 (129-230)||(13765406-13765507)
chr5 (129-234)||(16521221-16521326)
chr5 (129-242)||(19849676-19849789)
chr5 (129-230)||(28736507-28736608)
chr5 (129-234)||(30894257-30894362)
chr5 (129-230)||(34606515-34606616)
chr5 (63-173)||(36798379-36798489)
chr5 (129-230)||(42739732-42739833)
chr5 (129-244)||(3020725-3020840)
chr5 (130-186)||(28446194-28446250)
chr5 (198-242)||(31157036-31157080)
chr5 (129-213)||(38973453-38973537)
chr5 (129-244)||(8755080-8755195)
chr5 (188-234)||(931989-932035)
chr5 (129-215)||(10332147-10332233)
chr5 (188-230)||(35306847-35306889)
chr5 (188-234)||(42947527-42947573)
chr5 (129-226)||(1055438-1055535)
chr5 (129-230)||(8340105-8340206)
chr5 (129-230)||(12049262-12049363)
chr5 (160-209)||(22471804-22471853)
chr5 (129-230)||(28620106-28620207)
chr5 (130-186)||(37897785-37897842)
chr5 (129-230)||(40767955-40768056)
chr5 (133-209)||(4887522-4887598)
chr5 (188-244)||(7623651-7623707)
chr5 (160-196)||(20040712-20040748)
chr5 (198-242)||(21066475-21066519)
chr5 (129-209)||(26365932-26366012)
chr5 (188-236)||(34734212-34734260)
chr5 (63-115)||(40279231-40279283)
chr5 (188-232)||(42779311-42779355)
[»] chr3 (89 HSPs)
chr3 (129-244)||(8024914-8025029)
chr3 (130-244)||(44436530-44436644)
chr3 (130-244)||(33329749-33329863)
chr3 (63-242)||(51315618-51315797)
chr3 (65-242)||(44585920-44586097)
chr3 (65-242)||(48348393-48348569)
chr3 (130-238)||(43747418-43747526)
chr3 (63-229)||(54719144-54719308)
chr3 (63-196)||(38957846-38957980)
chr3 (130-241)||(44433200-44433310)
chr3 (63-242)||(1814691-1814866)
chr3 (145-235)||(38177259-38177349)
chr3 (142-238)||(36677649-36677745)
chr3 (142-238)||(36687729-36687825)
chr3 (61-241)||(54464161-54464341)
chr3 (130-240)||(19404530-19404640)
chr3 (133-242)||(86644-86753)
chr3 (130-243)||(28712522-28712635)
chr3 (73-238)||(578551-578714)
chr3 (63-240)||(3916432-3916607)
chr3 (138-238)||(25843441-25843541)
chr3 (64-242)||(46226699-46226877)
chr3 (149-242)||(53184596-53184688)
chr3 (130-242)||(7218285-7218397)
chr3 (130-242)||(47189728-47189840)
chr3 (130-241)||(28204621-28204732)
chr3 (141-244)||(44624703-44624805)
chr3 (130-242)||(20432318-20432431)
chr3 (130-235)||(27178288-27178393)
chr3 (130-242)||(1938384-1938496)
chr3 (141-241)||(14856691-14856791)
chr3 (60-242)||(43586697-43586875)
chr3 (139-239)||(52008319-52008421)
chr3 (133-242)||(35359067-35359176)
chr3 (129-242)||(36567008-36567121)
chr3 (182-242)||(12759642-12759702)
chr3 (146-209)||(49787334-49787397)
chr3 (144-214)||(4474150-4474220)
chr3 (129-242)||(2205662-2205774)
chr3 (129-242)||(38511790-38511903)
chr3 (129-230)||(53531951-53532052)
chr3 (64-173)||(22494555-22494663)
chr3 (63-203)||(14340907-14341045)
chr3 (128-230)||(25248756-25248858)
chr3 (129-244)||(27857266-27857381)
chr3 (129-243)||(787166-787280)
chr3 (63-170)||(50802660-50802766)
chr3 (63-170)||(50873111-50873217)
chr3 (130-238)||(3192840-3192949)
chr3 (129-230)||(9153622-9153723)
chr3 (129-234)||(10864182-10864287)
chr3 (63-173)||(25902556-25902666)
chr3 (129-230)||(27748311-27748412)
chr3 (129-230)||(31117687-31117788)
chr3 (129-242)||(37182132-37182245)
chr3 (129-230)||(42230176-42230277)
chr3 (129-209)||(35494128-35494208)
chr3 (129-209)||(36315918-36315998)
chr3 (129-209)||(40989505-40989585)
chr3 (129-213)||(46984949-46985033)
chr3 (129-213)||(50764094-50764178)
chr3 (129-209)||(55094486-55094566)
chr3 (139-186)||(28944105-28944152)
chr3 (65-120)||(42686485-42686540)
chr3 (130-173)||(44436456-44436499)
chr3 (129-192)||(44702050-44702113)
chr3 (130-173)||(51315562-51315605)
chr3 (129-231)||(9630835-9630937)
chr3 (188-242)||(19391768-19391822)
chr3 (188-234)||(25782794-25782840)
chr3 (129-234)||(2118780-2118885)
chr3 (130-186)||(4474259-4474316)
chr3 (129-230)||(5577000-5577101)
chr3 (129-230)||(28097569-28097670)
chr3 (129-230)||(30200559-30200660)
chr3 (129-230)||(32458928-32459029)
chr3 (129-230)||(33621933-33622034)
chr3 (129-230)||(33933434-33933535)
chr3 (160-209)||(33943685-33943734)
chr3 (129-230)||(36016906-36017007)
chr3 (129-230)||(45760378-45760479)
chr3 (129-230)||(52917464-52917565)
chr3 (160-213)||(55093249-55093302)
chr3 (129-229)||(5153927-5154027)
chr3 (130-178)||(12759576-12759623)
chr3 (129-213)||(17256695-17256779)
chr3 (130-170)||(38958051-38958091)
chr3 (129-209)||(51225053-51225133)
chr3 (188-244)||(53191087-53191143)
[»] chr2 (71 HSPs)
chr2 (130-240)||(44617875-44617985)
chr2 (63-244)||(39918435-39918616)
chr2 (63-238)||(34679098-34679273)
chr2 (130-244)||(14489281-14489395)
chr2 (130-240)||(37431611-37431721)
chr2 (130-242)||(34760915-34761027)
chr2 (63-242)||(43028795-43028973)
chr2 (140-242)||(27489510-27489612)
chr2 (130-243)||(4925507-4925620)
chr2 (130-235)||(5470478-5470583)
chr2 (130-242)||(6510068-6510179)
chr2 (130-242)||(8857114-8857226)
chr2 (130-244)||(2609220-2609335)
chr2 (63-242)||(31827526-31827706)
chr2 (140-242)||(24472581-24472683)
chr2 (130-244)||(37803191-37803304)
chr2 (133-242)||(5008422-5008531)
chr2 (130-235)||(14943686-14943791)
chr2 (133-230)||(25333569-25333666)
chr2 (130-242)||(25411609-25411721)
chr2 (130-218)||(32969625-32969713)
chr2 (130-242)||(35718713-35718825)
chr2 (130-242)||(41196364-41196476)
chr2 (145-238)||(5362313-5362407)
chr2 (63-241)||(6592725-6592905)
chr2 (130-242)||(8553678-8553789)
chr2 (133-244)||(24306151-24306262)
chr2 (63-239)||(19399314-19399488)
chr2 (130-242)||(15022906-15023018)
chr2 (145-242)||(19895748-19895845)
chr2 (64-242)||(18969228-18969410)
chr2 (130-195)||(16043203-16043268)
chr2 (143-242)||(32013194-32013293)
chr2 (145-238)||(4576681-4576774)
chr2 (129-230)||(40493713-40493814)
chr2 (129-242)||(42445439-42445552)
chr2 (65-186)||(4576546-4576667)
chr2 (84-185)||(21361902-21362003)
chr2 (129-209)||(28719444-28719524)
chr2 (129-213)||(35921029-35921113)
chr2 (130-185)||(25453-25508)
chr2 (129-242)||(2936922-2937035)
chr2 (129-230)||(19025962-19026063)
chr2 (181-242)||(36195713-36195774)
chr2 (129-230)||(36987558-36987659)
chr2 (130-186)||(5470395-5470451)
chr2 (129-213)||(23686663-23686747)
chr2 (141-213)||(43741665-43741737)
chr2 (130-173)||(6510203-6510246)
chr2 (129-244)||(31784382-31784497)
chr2 (130-173)||(34679296-34679339)
chr2 (199-242)||(40711470-40711513)
chr2 (188-234)||(7464080-7464126)
chr2 (130-184)||(14489404-14489458)
chr2 (129-230)||(21552686-21552787)
chr2 (130-184)||(32969717-32969771)
chr2 (129-230)||(11362706-11362807)
chr2 (160-213)||(14983364-14983417)
chr2 (160-213)||(16144790-16144843)
chr2 (63-120)||(25375129-25375186)
chr2 (129-230)||(25888036-25888137)
chr2 (129-186)||(31827723-31827780)
chr2 (129-230)||(34123308-34123409)
chr2 (129-206)||(42274693-42274770)
chr2 (130-178)||(6592932-6592980)
chr2 (188-240)||(19206284-19206336)
chr2 (62-110)||(19399182-19399230)
chr2 (129-205)||(21633178-21633254)
chr2 (129-209)||(23048417-23048497)
chr2 (129-209)||(35180452-35180532)
chr2 (129-209)||(43891525-43891605)
[»] chr7 (68 HSPs)
chr7 (130-251)||(18504311-18504432)
chr7 (65-244)||(36580407-36580585)
chr7 (130-242)||(15107126-15107238)
chr7 (63-242)||(28472391-28472567)
chr7 (130-251)||(28785880-28786001)
chr7 (130-241)||(36903331-36903441)
chr7 (130-242)||(44312877-44312988)
chr7 (63-242)||(35250120-35250298)
chr7 (129-242)||(29834285-29834398)
chr7 (63-242)||(15029059-15029240)
chr7 (65-239)||(18186588-18186763)
chr7 (130-239)||(6726392-6726500)
chr7 (145-242)||(8073957-8074054)
chr7 (130-214)||(3381930-3382013)
chr7 (130-242)||(41243711-41243822)
chr7 (66-242)||(21505752-21505927)
chr7 (130-251)||(47909761-47909887)
chr7 (130-242)||(4049776-4049889)
chr7 (141-236)||(15348029-15348124)
chr7 (130-205)||(28350184-28350259)
chr7 (130-210)||(17876237-17876317)
chr7 (130-242)||(20184985-20185096)
chr7 (130-218)||(23826087-23826175)
chr7 (139-242)||(5172588-5172691)
chr7 (63-242)||(14247439-14247613)
chr7 (129-242)||(25987056-25987169)
chr7 (138-242)||(23745968-23746070)
chr7 (130-214)||(28350307-28350389)
chr7 (145-232)||(19644885-19644972)
chr7 (129-242)||(497245-497358)
chr7 (139-220)||(20505147-20505228)
chr7 (129-234)||(35437273-35437378)
chr7 (129-234)||(38053213-38053318)
chr7 (63-228)||(17931878-17932039)
chr7 (130-170)||(40872353-40872393)
chr7 (129-234)||(25036174-25036279)
chr7 (129-230)||(34288115-34288216)
chr7 (129-234)||(35121480-35121584)
chr7 (129-230)||(39976796-39976897)
chr7 (133-170)||(42256655-42256692)
chr7 (129-230)||(42997197-42997298)
chr7 (129-244)||(930775-930890)
chr7 (130-206)||(3318384-3318460)
chr7 (130-214)||(11374130-11374213)
chr7 (130-186)||(15348147-15348203)
chr7 (129-213)||(30503774-30503858)
chr7 (130-186)||(36580341-36580397)
chr7 (188-244)||(40872298-40872354)
chr7 (129-213)||(42437879-42437963)
chr7 (199-242)||(3319179-3319222)
chr7 (129-244)||(7974456-7974571)
chr7 (181-244)||(10097687-10097750)
chr7 (130-173)||(14247361-14247404)
chr7 (63-110)||(36903533-36903580)
chr7 (129-230)||(7195523-7195624)
chr7 (130-192)||(9500085-9500147)
chr7 (129-223)||(10312379-10312473)
chr7 (188-242)||(23740398-23740452)
chr7 (144-210)||(45717980-45718046)
chr7 (130-171)||(5172729-5172770)
chr7 (129-230)||(9035507-9035608)
chr7 (129-230)||(18295919-18296020)
chr7 (129-234)||(20387691-20387796)
chr7 (129-234)||(20392165-20392270)
chr7 (129-230)||(47731769-47731870)
chr7 (199-244)||(16879373-16879420)
chr7 (129-209)||(42436955-42437035)
chr7 (163-215)||(44434286-44434338)
[»] scaffold0328 (1 HSPs)
scaffold0328 (130-244)||(9479-9593)
[»] chr8 (63 HSPs)
chr8 (130-244)||(21486722-21486836)
chr8 (130-240)||(41487346-41487456)
chr8 (130-242)||(3676262-3676374)
chr8 (65-215)||(37939917-37940063)
chr8 (63-241)||(45177202-45177380)
chr8 (130-242)||(29044681-29044793)
chr8 (130-218)||(37813249-37813337)
chr8 (144-242)||(25144024-25144122)
chr8 (130-251)||(29657771-29657893)
chr8 (130-242)||(20853444-20853556)
chr8 (130-242)||(6807303-6807415)
chr8 (130-242)||(16982745-16982856)
chr8 (130-242)||(30539125-30539237)
chr8 (145-242)||(9762283-9762380)
chr8 (130-223)||(39889926-39890019)
chr8 (130-206)||(32071185-32071261)
chr8 (130-242)||(44101424-44101535)
chr8 (141-241)||(23702270-23702370)
chr8 (64-225)||(26823828-26823989)
chr8 (63-242)||(22192432-22192609)
chr8 (139-245)||(29790834-29790940)
chr8 (142-242)||(27545420-27545519)
chr8 (145-241)||(33298422-33298518)
chr8 (129-244)||(5734316-5734431)
chr8 (141-242)||(14880414-14880514)
chr8 (130-243)||(22846511-22846624)
chr8 (63-244)||(44269256-44269430)
chr8 (130-229)||(521591-521689)
chr8 (129-244)||(30358910-30359025)
chr8 (129-244)||(37205672-37205787)
chr8 (129-234)||(7013491-7013596)
chr8 (63-120)||(36688253-36688310)
chr8 (188-244)||(8287735-8287791)
chr8 (129-213)||(27300680-27300764)
chr8 (129-209)||(45309488-45309568)
chr8 (129-244)||(20095818-20095933)
chr8 (129-230)||(3411468-3411570)
chr8 (129-234)||(15188070-15188175)
chr8 (129-230)||(16531394-16531495)
chr8 (193-242)||(17071041-17071090)
chr8 (193-242)||(17577182-17577231)
chr8 (129-209)||(12278902-12278982)
chr8 (182-242)||(35213163-35213223)
chr8 (129-192)||(5548074-5548137)
chr8 (129-244)||(37953441-37953556)
chr8 (130-173)||(41487268-41487311)
chr8 (129-244)||(41574222-41574337)
chr8 (188-242)||(995127-995181)
chr8 (163-213)||(23936438-23936488)
chr8 (65-115)||(25896993-25897043)
chr8 (167-229)||(36688153-36688215)
chr8 (130-196)||(41602550-41602616)
chr8 (129-234)||(4132821-4132926)
chr8 (129-230)||(4146852-4146953)
chr8 (129-230)||(6745139-6745240)
chr8 (129-230)||(23233925-23234026)
chr8 (63-120)||(28349563-28349620)
chr8 (129-234)||(30845621-30845726)
chr8 (129-242)||(36226548-36226661)
chr8 (129-230)||(44886049-44886150)
chr8 (129-234)||(45106502-45106607)
chr8 (141-209)||(15181719-15181786)
chr8 (166-242)||(25897073-25897148)
[»] chr6 (48 HSPs)
chr6 (130-244)||(30349416-30349530)
chr6 (130-237)||(6036799-6036906)
chr6 (66-242)||(10727328-10727504)
chr6 (130-239)||(32143326-32143435)
chr6 (142-242)||(3812820-3812919)
chr6 (130-230)||(26311550-26311650)
chr6 (130-240)||(266248-266357)
chr6 (63-209)||(2853582-2853729)
chr6 (130-242)||(33399852-33399964)
chr6 (139-242)||(5003213-5003316)
chr6 (63-242)||(17248637-17248816)
chr6 (130-242)||(17532319-17532430)
chr6 (130-242)||(18031076-18031188)
chr6 (66-230)||(20474851-20475014)
chr6 (130-242)||(1377275-1377387)
chr6 (130-242)||(1385023-1385135)
chr6 (130-226)||(26601528-26601624)
chr6 (130-218)||(2840966-2841054)
chr6 (146-230)||(11351719-11351803)
chr6 (141-186)||(6036723-6036768)
chr6 (129-226)||(27771363-27771460)
chr6 (140-228)||(239093-239181)
chr6 (129-244)||(7324722-7324837)
chr6 (130-209)||(22517340-22517419)
chr6 (129-230)||(5606363-5606464)
chr6 (129-230)||(6261448-6261549)
chr6 (129-230)||(7391622-7391723)
chr6 (129-230)||(10977725-10977826)
chr6 (129-230)||(11614965-11615066)
chr6 (129-209)||(2017239-2017319)
chr6 (129-209)||(11624215-11624295)
chr6 (130-186)||(12766405-12766461)
chr6 (188-238)||(2203289-2203339)
chr6 (129-215)||(4037364-4037450)
chr6 (188-242)||(16765167-16765221)
chr6 (129-211)||(29874368-29874450)
chr6 (129-230)||(1815121-1815222)
chr6 (130-179)||(3579662-3579711)
chr6 (129-194)||(4037105-4037170)
chr6 (133-170)||(5605903-5605940)
chr6 (129-230)||(11322170-11322271)
chr6 (129-230)||(12256831-12256932)
chr6 (129-230)||(21008891-21008992)
chr6 (129-230)||(30965758-30965859)
chr6 (129-209)||(2018364-2018444)
chr6 (129-173)||(2840856-2840900)
chr6 (130-186)||(2853495-2853551)
chr6 (129-209)||(11623286-11623366)
[»] scaffold0248 (1 HSPs)
scaffold0248 (130-240)||(471-581)
[»] scaffold0015 (2 HSPs)
scaffold0015 (130-242)||(76930-77041)
scaffold0015 (63-120)||(77117-77174)
[»] scaffold0011 (1 HSPs)
scaffold0011 (84-242)||(145375-145533)
[»] scaffold0137 (1 HSPs)
scaffold0137 (63-240)||(19915-20091)
[»] scaffold0194 (1 HSPs)
scaffold0194 (130-242)||(25034-25145)
[»] scaffold0025 (1 HSPs)
scaffold0025 (130-242)||(19163-19275)
[»] scaffold0150 (1 HSPs)
scaffold0150 (65-210)||(9703-9847)
[»] scaffold0062 (2 HSPs)
scaffold0062 (130-242)||(46209-46321)
scaffold0062 (130-173)||(46144-46187)
[»] scaffold0578 (1 HSPs)
scaffold0578 (133-232)||(3146-3245)
[»] scaffold0166 (1 HSPs)
scaffold0166 (63-242)||(21659-21836)
[»] scaffold0417 (1 HSPs)
scaffold0417 (150-242)||(9425-9517)
[»] scaffold0372 (2 HSPs)
scaffold0372 (130-242)||(191-302)
scaffold0372 (63-109)||(125-171)
[»] scaffold0809 (1 HSPs)
scaffold0809 (145-230)||(2907-2991)
[»] scaffold0041 (2 HSPs)
scaffold0041 (130-170)||(93889-93929)
scaffold0041 (188-244)||(93928-93984)
[»] scaffold0016 (1 HSPs)
scaffold0016 (129-209)||(199735-199815)
[»] scaffold0014 (1 HSPs)
scaffold0014 (130-230)||(79058-79158)
[»] scaffold0001 (2 HSPs)
scaffold0001 (129-244)||(400771-400887)
scaffold0001 (129-193)||(405132-405196)
[»] scaffold0047 (1 HSPs)
scaffold0047 (129-215)||(63102-63188)
[»] scaffold0854 (1 HSPs)
scaffold0854 (129-214)||(1970-2055)
[»] scaffold0283 (1 HSPs)
scaffold0283 (129-230)||(1251-1352)
[»] scaffold0067 (1 HSPs)
scaffold0067 (130-170)||(4220-4260)


Alignment Details
Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 63 - 244
Target Start/End: Complemental strand, 14449598 - 14449416
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||||||||||| || ||||| |||| |||||||||||||||| || ||||||        | ||||||||||| ||||||||||||||| ||||    
T  14449598 gcttaatagtagttttagccccctaacttttccaaagttgcgattttggcctcttaaggaaaaaaaactacaaaaccgctccctaagttttgcatttgtg 14449499  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||||| ||||| |||||| |||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||    
T  14449498 gcagttttggcccccaaggccaattttgactcggtttacgctgacgtggcaccataagtgaggtgccacgtgttattttttat 14449416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 12719691 - 12719579
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||| || ||||||||||    
T  12719691 tacaaaaccaccccctaagttttgcatctgtggcagttttggcctccaagaccaattttgactcggtctacgctgatgtggcaccccaagtgaggtgcca 12719592  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  12719591 catgttatttttt 12719579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 21597648 - 21597536
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| |||| || |||| ||||||||| |||||||||||| |||||||||||||||||||    
T  21597648 tacaaaaccgtcccctaaattttgcatatgtggcagttttggcccccaaaactaattttgactcggtctacgctgacgtggcaccctaaatgaggtgcca 21597549  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  21597548 cgtgttatttttt 21597536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 63 - 244
Target Start/End: Complemental strand, 44356709 - 44356530
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| ||| ||||||||||||||||| || | ||||       | |||||||||||||||||||||||||||||||||    
T  44356709 gcttaatagcagttttagcc-cctaactttctcaaagttgcgattttggccgcctaagaaaaaaat-tacaaaaccgccccctaagttttgcatatgtgg 44356612  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||||| |||||||||||| ||||| ||| |||| | ||||| |||||||| ||||||| ||| |||||||||||||    
T  44356611 cagttttggcccccaagaccaattttgacttggtctacgataacgtggcaccctaagtgaggtgtcacgtgttattttttat 44356530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 51362539 - 51362719
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta---tacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||| |||| ||||        |   ||||||||||||||||||||||||||||||||    
T  51362539 ttaatagtagttttagccccctaacttttctaaagttgcgattttggccccctaagaagaaaaaaaactacaaaaccgccccctaagttttgcatatgtg 51362638  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| |||||||||||| |||||| || ||| |||||||| |||||||| |||||| | || |||||||||||    
T  51362639 gcagttttggcccccaagaccaattttgactcagtctacactgacgtggcaccctaagtgaggttcaacgtgttatttttt 51362719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 2654215 - 2654103
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| |||||||||||||||||||||||||||||||| || ||||| |||||| ||||| ||| |||||||||||| |||||||| | ||| ||||    
T  2654215 tacaaaactgccccctaagttttgcatatgtggcagttttgacccccaaggccaattttgacttggtctacgctgacgtggcaccctaagtcaggagcca 2654116  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  2654115 catgttatttttt 2654103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 43074825 - 43074722
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||||| |||||| || |||||||||||| |||||||| ||||||||||| |||||||    
T  43074825 gccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgttatt 43074726  T
Q  239 tttt 242  Q
    ||||    
T  43074725 tttt 43074722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 53312287 - 53312467
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||| | ||||| || ||||| ||||||||||||||||||||| |||| ||||        | ||||||||| |||||||| ||||||| |||||    
T  53312287 gcttaatagcatttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaacaaactacaaaaccaccccctaaattttgcacatgtg 53312386  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| ||||| ||||||  ||||| || |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  53312387 gcagttttggcccccaaggccaatttggactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgttttttttt 53312467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 2836900 - 2837079
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||  |||||||||| ||||| |||| ||||| |||||||||| ||||  |||         ||||||||||||||||||||||||||| ||||     
T  2836900 gcttaataacagttttaaccccctaacttttccaaagctgcgattttggcccccaaagaaaaaaaactacaaaaccgccccctaagttttgcatgtgtga 2836999  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
     |||||||||| ||||| |||||| |||||| || ||| |||||||| |||||||| ||||||||||| |||||||||||    
T  2837000 gagttttggcccccaaggccaattttgactcagtctacactgacgtggcaccctaagtgaggtgccacgtgttatttttt 2837079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 10060012 - 10059846
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta--tacaaaaccgccccctaagttttgcatatgt 160  Q
    ||||||||| |||||||  | ||||| ||||||||||||||||||||  |||||||||        |  ||||||||||||||||||||||||||| |||    
T  10060012 gcttaatagcagttttagacccctaattttttcaaagttgcgatttttgccccttaagaaaaaaaaaactacaaaaccgccccctaagttttgcatctgt 10059913  T
Q  161 ggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    |||||||||||||  |||| |||||| ||||||||| |||| ||||||| |||||||| ||||||||    
T  10059912 ggcagttttggccctcaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgc 10059846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 2016859 - 2016970
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||| |||||||||||| |||||||| |||||| |||    
T  2016859 tacaaaactgccccctaagttttgcacatgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggt-cca 2016957  T
Q  230 catgttatttttt 242  Q
    | |||| ||||||    
T  2016958 cgtgttttttttt 2016970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 20112396 - 20112288
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||  |||||| |||||||||  ||||||||||| ||| |||| ||||||||||    
T  20112396 tacaaaaccgcccccaaagttttgcatatgtggcagttttggcccccaaagccaattttgactcggtcaacgctgacgtggcactctaagtgaggtgcca 20112297  T
Q  230 catgttatt 238  Q
    | |||||||    
T  20112296 cgtgttatt 20112288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 25909488 - 25909667
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||| ||||| |||| |||||||| ||||||| |||| ||||         || |||||||||||||||||||||||  |||||    
T  25909488 gcttaatagcagttttaaccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactataaaaccgccccctaagttttgcacttgtgg 25909587  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
      ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||| | || |||||| |||||||||||    
T  25909588 aggttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccttaagtaagatgccacgtgttatttttt 25909667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 1420790 - 1420678
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||| |||||||||| || || ||||| |||||| |||||||||  ||||||||||| |||||||| ||||||||||    
T  1420790 tacaaaaccgccccataagttttgcatttgtggcagttatgacccccaaggccaattttgactcggtcaacgctgacgtggcaccctaagtgaggtgcca 1420691  T
Q  230 catgttatttttt 242  Q
    | ||||| |||||    
T  1420690 cgtgttagttttt 1420678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 29697590 - 29697701
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||| |||||| |||| | || |||||||||||| |||||||| ||||||| ||    
T  29697590 tacaaaaccgccccctaagttttgcatctgtggcagttttgg-ttccaaggccaattttgacccagtctacgctgacgtggcaccctaagtgaggtgtca 29697688  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  29697689 cgtgttatttttt 29697701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 4796283 - 4796178
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    ||||||||||  |||||||||||  |||||||||||||||| |||| | ||||| ||||||||| |||||||||||| |||||||| ||||||||||| |    
T  4796283 aaaaccgccctttaagttttgcacctgtggcagttttggcccccaaaatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccactt 4796184  T
Q  233 gttatt 238  Q
    ||||||    
T  4796183 gttatt 4796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 23759820 - 23759715
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||||||||||||| || |||| ||||||||||||||||| |||||| ||||||| | || ||||||||| |||||||| ||||||||||    
T  23759820 tacaaaaccgtcccctaagttttgtatctgtgacagttttggcctccaaggccaattttgactcgatctaagctgacgtggcaccctaagtgaggtgcca 23759721  T
Q  230 catgtt 235  Q
    | ||||    
T  23759720 cgtgtt 23759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 6637309 - 6637197
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||| |||||||||||| | ||||||||||||||  |||  |||||| ||||||||| ||| ||||| || |||||||| ||||||||||    
T  6637309 tacaaaatcgccccttaagttttgcatttctggcagttttggcccacaatgccaattttgactcggtctacactgacatggcaccctaagtgaggtgcca 6637210  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  6637209 catgttatttttt 6637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 21871701 - 21871521
Alignment:
Q  59 ctttgcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatat 158  Q
    |||| |||||||| | ||||| || ||||| |||||||||||||||||||||||||| |||          |||||||||||| |||||||||||||| |    
T  21871701 cttttcttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaaaaaac---tacaaaaccgcctcctaagttttgcatct 21871605  T
Q  159 gtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
     ||| |||||||||| |||| | ||||| | ||||||| ||||||||| |||||| |||| || |||| ||| |||||||||||    
T  21871604 ttggtagttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgttatttttt 21871521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 21927562 - 21927382
Alignment:
Q  59 ctttgcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatat 158  Q
    |||| |||||||| | ||||| || ||||| |||||||||||||||||||||||||| |||          |||||||||||| |||||||||||||| |    
T  21927562 cttttcttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaaaaaac---tacaaaaccgcctcctaagttttgcatct 21927466  T
Q  159 gtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
     ||| |||||||||| |||| | ||||| | ||||||| ||||||||| |||||| |||| || |||| ||| |||||||||||    
T  21927465 ttggtagttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgttatttttt 21927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 239
Target Start/End: Original strand, 54855305 - 54855480
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||| ||||| ||| |||||| ||||||||||||| | ||||          ||||||| ||||| |||||||||||| | |||    
T  54855305 gcttaatagcagttttaaccacctaactttctcaaagctgcgattttgacctcataagaaaaaaaacgacaaaactgccccttaagttttgcatct-tgg 54855403  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
     |||||||| | ||||  |||||| ||||||||| |||||||||||| |||||||| ||||||||||| ||||||||    
T  54855404 tagttttggtccccaaagccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgttattt 54855480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 11824257 - 11824368
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||| |||||||||||||| | ||||| |||||| |||||| || |||||||| ||| |||||||| ||||||||||    
T  11824257 tacaaaaccgcccc-taagttttgcatgtgtggcagttttggtc-ccaaggccaattttgactcagtctacgctgatgtggcaccctaagtgaggtgcca 11824354  T
Q  230 catgttatttttta 243  Q
      ||||||||||||    
T  11824355 attgttatttttta 11824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 243
Target Start/End: Original strand, 27978715 - 27978872
Alignment:
Q  85 ctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaa 184  Q
    |||| ||| |||||||||||||||||||||| ||||       | |||||||| |||   |||||||||||| ||||||||||||| || ||||| ||||    
T  27978715 ctaactttctcaaagttgcgattttgaccccctaagaaaaaaat-tacaaaactgccatataagttttgcatttgtggcagttttgacccccaaggccaa 27978813  T
Q  185 ttgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttta 243  Q
    || ||||||||| |||||||||||| ||||| |  ||| ||||||| ||||||||||||    
T  27978814 ttttgactcggtctacgctgacgtggcaccccacgtgaagtgccacgtgttatttttta 27978872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 47999533 - 47999698
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||  |||| ||||         ||||||||||| || |||||||| ||| |||||||    
T  47999533 ttaatagcagttttaac-tcctaattttttcaaagttgcgatttttgccccctaagaaaaaaaactacaaaaccgctccataagttttacatctgtggca 47999631  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccaca 231  Q
    |||||| || | ||| |||||| ||| ||||| |||||||||||| |||| ||| ||||||||||||    
T  47999632 gttttgacccctaaggccaattttgattcggtctacgctgacgtggcaccttaagtgaggtgccaca 47999698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 49185665 - 49185749
Alignment:
Q  158 tgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||||||| ||||| |||||| ||||| ||| |||||||||||| ||||||||  ||||||||||||||||||||||    
T  49185665 tgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccctaagcgaggtgccacatgttatttttt 49185749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 51371531 - 51371655
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||  ||||| |||||||||||||| ||||||||||| || ||||   ||||| ||||||||| ||| |||||||| |||||||||||||||||||    
T  51371531 tacaaaattgccccttaagttttgcatatatggcagttttgacccccaatgtcaattttgactcggtctacactgacgtggcaccctaaatgaggtgcca 51371630  T
Q  230 c---atgttattttttatcaaaaat 251  Q
    |    |||||||||||| |||||||    
T  51371631 cgtgttgttattttttaccaaaaat 51371655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 14016793 - 14016902
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||| | |||| ||||| ||| || ||||| ||| | |||| ||||||||| ||    
T  14016793 tacaaaaccgccccttaagttttgtatttgtggcagttttggcctccaaggctaattttgacttggtctaggctgatgtggctcccttaatgaggtgtca 14016892  T
Q  230 catgttattt 239  Q
    | ||||||||    
T  14016893 cgtgttattt 14016902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 16292273 - 16292448
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||||| |||||||| ||||| ||||| |||||||||||||||  |||||||        ||  ||||| ||||| |||||||||||| ||||||||    
T  16292273 ttaatagtaattttaaccccctaatttttttaaagttgcgattttggtcccttaaaaaaaaacta--caaaatcgccctctaagttttgcacatgtggca 16292370  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||| |||     |||| ||||||||| ||| |||||||| | |||||| ||||||| ||| |||||||||||    
T  16292371 gttttggcccccatatgtaattttgactcggtctacactgacgtggccccctaagtgaggtgtcacgtgttatttttt 16292448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 31553488 - 31553376
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||||||| |||| ||| | |||||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| |||||||| |    
T  31553488 tacaaaatcgccccctaaattttacatctatggcagttttggcccccaaggccaattttgactcggtctacgctaacgcggcaccctaagtgaggtgcta 31553389  T
Q  230 catgttatttttt 242  Q
    | ||||| |||||    
T  31553388 cgtgttaattttt 31553376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 21322954 - 21322848
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    ||||| ||| ||||||||||||||||||| |||||||| || ||||  |||||| ||||||||| |||||| ||| ||||| ||||||||| |||||| |    
T  21322954 aaaactgcctcctaagttttgcatatgtgacagttttgacccccaatgccaattttgactcggtctacgctaacgcgacactctaaatgagatgccacgt 21322855  T
Q  233 gttattt 239  Q
     ||||||    
T  21322854 attattt 21322848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 34567848 - 34567750
Alignment:
Q  144 ctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||||||||||||||||||||| ||||   |||||  ||||||||  | ||||||||||||||| || ||| ||||||| |||||||||||    
T  34567848 ctaagttttgcatatgtggcagttttggcccccaatgtcaatttcgactcggtcaatgctgacgtgacacccaaagtgaagtgccacgtgttatttttt 34567750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 54984079 - 54983969
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||||||| ||||||| ||||| ||||||||||  ||||   ||||| || || ||| |||||||||||| |||||||| |||||||||     
T  54984079 tacaaaatcgccccctaaattttgcacatgtgtcagttttggcacccaatgtcaattttggcttggtctacgctgacgtggcaccctaagtgaggtgccc 54983980  T
Q  230 catgttatttt 240  Q
    |||||||||||    
T  54983979 catgttatttt 54983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 50769366 - 50769543
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtggc 163  Q
    ||||||| ||||||| || ||||| |||  |||||||||||||||| |||| ||||        | |||||||||||||| |||||||||||| | ||||    
T  50769366 ttaatagcagttttatccccctaactttcccaaagttgcgattttgcccccctaagaaaaaaaaactacaaaaccgcccc-taagttttgcatctatggc 50769464  T
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||| ||| | |||  ||||| ||||||||  |||||||||||  |||||| | ||||||||||| |||||||||||    
T  50769465 agttttagcccctaaggtcaattttgactcggcctacgctgacgtagcaccctgagtgaggtgccacgtgttatttttt 50769543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 1571467 - 1571559
Alignment:
Q  134 aaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    |||||||| | || ||||||||||||||||||||||||| ||||| |||||||  |||||||  ||| |||||||| |||||||| |||||||    
T  1571467 aaaccgcctcatatgttttgcatatgtggcagttttggcttccaaaaccaatttagactcggcctacactgacgtggcaccctaagtgaggtg 1571559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 20118133 - 20118053
Alignment:
Q  146 aagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||| ||| | ||||| |||||| |||||||| |||||||    
T  20118133 aagttttgcatatgtgccagttttggcccccaagaccaattttgattcgatctacgcggacgtggcaccctaagtgaggtg 20118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 21451526 - 21451637
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| || | ||||| |||||||  |||||||||||||||| | ||| | |||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  21451526 tacaaaaacgtctcctaaattttgcacttgtggcagttttggccac-aaggcgaattttgactcggtctacactgacgtgacaccctaagtgaggtgcca 21451624  T
Q  230 catgttatttttt 242  Q
    | | |||||||||    
T  21451625 cgtattatttttt 21451637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 6207420 - 6207318
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| |||||  ||||| ||||| ||| |||||| | ||| ||| |||| |||| || ||    
T  6207420 tacaaaaccgccccctaagttttgcatttgtggcaattttggcccccaaggtcaattttgacttggtctacgctaatgtggcactctaagtgagatgtca 6207321  T
Q  230 cat 232  Q
    |||    
T  6207320 cat 6207318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 6615040 - 6614978
Alignment:
Q  180 accaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||    
T  6615040 accaattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgttatatttt 6614978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 14061016 - 14060873
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| || ||||||  ||||| ||||||||||||||||||||| | || ||||         |||||||| | |||||||||||| ||| |||||    
T  14061016 gcttaatagcagctttaactccctaattttttcaaagttgcgattttggctccctaagaaaaaaaactacaaaactgtcccctaagttttacatctgtgg 14060917  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgac 206  Q
    ||||||||||| ||||| | |||| ||||||||| || ||||||    
T  14060916 cagttttggcccccaaggctaattttgactcggtctatgctgac 14060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 51233548 - 51233661
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtgg-cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||| |||||| |||||||||||||   |||| ||||||||||| ||||| ||||||  |||| ||| |||||||||||| |||||||| |||||||||    
T  51233548 tacaataccgcctcctaagttttgcactcgtggacagttttggcccccaag-ccaatttggacttggtctacgctgacgtggcaccctaagtgaggtgcc 51233646  T
Q  229 acatgttatttttta 243  Q
    || || |||||||||    
T  51233647 acgtggtatttttta 51233661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 52463100 - 52462922
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||  ||||||| || ||||| |||||||||||||||||||||  ||  ||||         |||||||| ||||| |||||||||||| | ||     
T  52463100 gcttaataacagttttagccccctaattttttcaaagttgcgattttgggcctctaagaaaaaaaactacaaaac-gccccttaagttttgcatctatga 52463002  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||| |||| ||||||| | || |||| ||| |||||||||||||| || ||||||| ||| |||||| ||||    
T  52463001 cagttttggcccccaaaaccaattttaacccggtctacactgacgtgacacccaaagtgaggtgtcacgtgttatctttt 52462922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 8965759 - 8965674
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaa 218  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||   ||||| ||||||||| |||| ||| ||| ||||||||    
T  8965759 aaaaccgccccctaagttttgcatctgtggcagttttggtccccaatgtcaattttgactcggtctacgttgatgtggcaccctaa 8965674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 8070712 - 8070803
Alignment:
Q  149 ttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||| || |||||||||||||||| || ||| ||||| | ||| ||| |||||||||||| ||||| || ||||||||||| |||||||||    
T  8070712 ttttgtatctgtggcagttttggccccctagatcaattttaacttggtctacgctgacgtggcaccccaagtgaggtgccacgtgttatttt 8070803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 14060760 - 14060865
Alignment:
Q  66 taatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcag 165  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||         ||||||||||||||||||| ||||||  | | ||||    
T  14060760 taatagcagttttaaccccctaactttttcaaagttgcgattttgaccccctaagaaaaaac--tacaaaaccgccccctaagctttgcaactatagcag 14060857  T
Q  166 ttttggcc 173  Q
    ||||||||    
T  14060858 ttttggcc 14060865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 53924987 - 53924888
Alignment:
Q  140 ccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    ||||||||||||||||| |||| |||||||| ||  ||||  ||||| ||||||||| |||| ||| |||||||||||| |||| || ||| ||||||||    
T  53924987 ccccctaagttttgcatttgtgacagttttgaccctcaaggtcaattttgactcggtctacgttgatgtgacaccctaagtgagatgtcacgtgttattt 53924888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 35393402 - 35393480
Alignment:
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||| ||||| |||||| ||||| | | || ||||| ||| |||||||| |||||||||||||||||||||||    
T  35393402 agttttggcccccaagcccaattttgacttgttctatgctgatgtggcaccctaagtgaggtgccacatgttatttttt 35393480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 5344337 - 5344438
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  5344337 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 5344436  T
Q  229 ac 230  Q
    ||    
T  5344437 ac 5344438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 26089538 - 26089646
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| ||||| |||||||| ||| |||| ||||||||| | | ||| |||||| |||||| |  |||||||||||| |||||||| ||| ||||||    
T  26089538 tacaaaacagccccttaagttttacatctgtgacagttttggtc-caaaggccaattttgactcagactacgctgacgtggcaccctaagtgaagtgcca 26089636  T
Q  230 catgttattt 239  Q
    | ||||||||    
T  26089637 cgtgttattt 26089646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 34158719 - 34158606
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  34158719 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 34158620  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  34158619 acgtgtcatttttt 34158606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 35083827 - 35083722
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | ||| |||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  35083827 atacaaaacagccccctatgttttgattctttggtagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 35083728  T
Q  229 acatgt 234  Q
    ||||||    
T  35083727 acatgt 35083722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 35383997 - 35383905
Alignment:
Q  138 cgccccctaagttttgca-tatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||| ||||||||||||| ||| |||||||||||||| ||||| |||||| ||| ||||| |||| ||||||| |||| ||| |||||||||||    
T  35383997 cgcctcctaagttttgcactat-tggcagttttggcccccaaggccaattttgattcggtctacgttgacgtggcaccgtaagtgaggtgccac 35383905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 42526196 - 42526096
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||| ||||||||||||||||||||||||||             ||| |||||| || ||| ||||||||||||||||| ||||||||||    
T  42526196 tacaaaaccgtcccataagttttgcatatgtggcagttttg-------------attttgactcagtctacactgacgtgacaccctaagtgaggtgcca 42526110  T
Q  230 catgttatttttta 243  Q
    | ||||||||||||    
T  42526109 cgtgttatttttta 42526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 55586683 - 55586788
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  55586683 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 55586782  T
Q  229 acatgt 234  Q
    ||||||    
T  55586783 acatgt 55586788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 33168059 - 33167979
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || ||||||||| |||||||||  |||||||||||    
T  33168059 atacaaaactgccccctatgtattggatctttggcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 33167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 18937441 - 18937374
Alignment:
Q  175 ccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| | ||||||| || ||||||||| |||||||| |||||| |||| |||||||||||    
T  18937441 ccaagaccaatttttactcggtctatgctgacgtgccaccctaagtgaggtaccacgtgttatttttt 18937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 53924748 - 53924870
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    |||||||||||||| |  || ||||| |||  | |||||| |||||||||||||||||       | |||||||||| |||||||||||||||  ||| |    
T  53924748 gcttaatagtagttctcgccccctaactttcacgaagttgtgattttgaccccttaagaaaaaaat-tacaaaaccgtcccctaagttttgcaactgtag 53924846  T
Q  163 cagttttggcctccaagaccaatt 186  Q
    ||||||||||| |||||| |||||    
T  53924847 cagttttggcccccaagatcaatt 53924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 104267 - 104368
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  104267 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 104366  T
Q  229 ac 230  Q
    ||    
T  104367 ac 104368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 6386798 - 6386899
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  6386798 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 6386897  T
Q  229 ac 230  Q
    ||    
T  6386898 ac 6386899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 7666444 - 7666343
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||  ||||||  | | |||||||||||| | || |||||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  7666444 atacaaaacagccccctttgttttgattctttggcagttttggacccccagaccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 7666345  T
Q  229 ac 230  Q
    ||    
T  7666344 ac 7666343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 19909174 - 19909227
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccct 116  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||||||||| |||||    
T  19909174 gcttaatagcagttttaaccccctaactttctcaaagttgcgattttggcccct 19909227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 28981980 - 28982081
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  28981980 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattattgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 28982079  T
Q  229 ac 230  Q
    ||    
T  28982080 ac 28982081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 38371510 - 38371397
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| ||||||||     
T  38371510 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgca 38371411  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  38371410 acgtgtcatttttt 38371397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 41707785 - 41707886
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||| ||||    
T  41707785 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgagatgcc 41707884  T
Q  229 ac 230  Q
    ||    
T  41707885 ac 41707886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 51696603 - 51696700
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||    
T  51696603 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtg 51696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 52114202 - 52114303
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  52114202 atacaaaacagccccctatgttttgattctttggcagttttggacccctagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 52114301  T
Q  229 ac 230  Q
    ||    
T  52114302 ac 52114303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 54216203 - 54216098
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| | |||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  54216203 atacaaaacagtcccctatgttttgattttttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 54216104  T
Q  229 acatgt 234  Q
    ||||||    
T  54216103 acatgt 54216098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 54606954 - 54607055
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||  |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  54606954 atacaaaatagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 54607053  T
Q  229 ac 230  Q
    ||    
T  54607054 ac 54607055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 44271925 - 44271841
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| || | | |||||||||||| || ||||||||| |||||||||  |||||||||| ||||    
T  44271925 atacaaaacagccccctatgtattgaatctttagcagttttggccccctagaccaattttgactcggtcaacgctgacgtcacac 44271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 27751410 - 27751295
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| ||||||| |    
T  27751410 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgtc 27751311  T
Q  229 acatgttattttttat 244  Q
    || ||| |||||||||    
T  27751310 acgtgtgattttttat 27751295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 37831660 - 37831726
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatat-gtggcagttttggcctccaagaccaattgtgactcggt 196  Q
    |||||||||||||||||||||||| || | |||||||||||| ||||| || |||||| |||||||||    
T  37831660 tacaaaaccgccccctaagttttg-atctagtggcagttttgccctcctaggccaattttgactcggt 37831726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 37973580 - 37973695
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||||| || ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  37973580 atacaaaacagccccatatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 37973679  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  37973680 acgtgtcaatttttat 37973695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 55732635 - 55732698
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgact 192  Q
    ||||||||| |||||||| || ||| |||| |||||||||||||| ||||| |||||| |||||    
T  55732635 atacaaaacagccccctatgtattggatatttggcagttttggcccccaaggccaattttgact 55732698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 20737545 - 20737499
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttga 111  Q
    ||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  20737545 ttaatagcagttttaacatcctaactttctcaaagttgcgattttga 20737499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 21451460 - 21451506
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgatttt 109  Q
    ||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  21451460 gcttaatagcagttttagcctcctaactttctcaaagttgcgatttt 21451506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 31250604 - 31250650
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||    
T  31250604 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgt 31250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 45289746 - 45289632
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||||||||  |||||  | | |||||||||||| | ||||| ||| |  |||||||||  ||||||||||| ||| |||| |||||||||    
T  45289746 atacaaaacagccccctatattttgattctttggcagttttggaccccaagtccattgttgactcggtcaacgctgacgtggcacactaagtgaggtgcc 45289647  T
Q  229 acatgt-tatttttt 242  Q
    || ||| ||||||||    
T  45289646 acgtgtctatttttt 45289632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 50513143 - 50513225
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| | ||||| ||| |  |||||||||  ||||||||||| ||| |||| ||||||||||| ||| |||||||    
T  50513143 tggcagttttggaccccaagtccattgttgactcggtcaacgctgacgtggcacactaagtgaggtgccacgtgtcatttttt 50513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 51537803 - 51537761
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||||||||  |||||||||||||||||||| |||||||||||    
T  51537803 tgactcggtcaacgctgacgtgacaccctaagtgaggtgccac 51537761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 52865448 - 52865514
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggt 196  Q
    |||| ||||||||||||||||||||  ||||| ||||||||||| |  || |||||| |||||||||    
T  52865448 tacagaaccgccccctaagttttgcccatgtgccagttttggccccgtaggccaattttgactcggt 52865514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 2837146 - 2837089
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaatt 186  Q
    ||||||||||||||||||||||| ||  ||| |||||||||| |||||||| ||||||    
T  2837146 tacaaaaccgccccctaagttttacaattgtagcagttttggccctccaaggccaatt 2837089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 8891721 - 8891822
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | || ||||||||| | | ||| ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  8891721 atacaaaacagccccctatgttttgattctttgacagttttggacccaaagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 8891820  T
Q  229 ac 230  Q
    ||    
T  8891821 ac 8891822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 10059751 - 10059792
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttgg 171  Q
    ||||||||||||||||||||||||||  ||| ||||||||||    
T  10059751 tacaaaaccgccccctaagttttgcaactgtagcagttttgg 10059792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 17262157 - 17262262
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||| | | || || ||| |  |||||||||  || |||||||| |||||||| |||||||||    
T  17262157 atacaaaacagccccctatgttttgattctttggcagttttagacccccagtccattgttgactcggtcaacactgacgtggcaccctaagtgaggtgcc 17262256  T
Q  229 acatgt 234  Q
    ||||||    
T  17262257 acatgt 17262262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 29432293 - 29432192
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  29432293 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccagtgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 29432194  T
Q  229 ac 230  Q
    ||    
T  29432193 ac 29432192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 34771467 - 34771406
Alignment:
Q  181 ccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||| |||||| || |||| ||| ||| |||||||| ||||||||||| |||||||||||    
T  34771467 ccaattttgactccgtctacgttgatgtggcaccctaagtgaggtgccacgtgttatttttt 34771406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 39136543 - 39136442
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  | |||||||  ||||||||||| |||||||| |||||||||    
T  39136543 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgctaactcggtcaacgctgacgtggcaccctaagtgaggtgcc 39136444  T
Q  229 ac 230  Q
    ||    
T  39136443 ac 39136442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 50769606 - 50769553
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||||  ||||||||||||  ||| |||||||||||| ||||||||||||    
T  50769606 aaaaccgcctactaagttttgcaactgtagcagttttggcccccaagaccaatt 50769553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 52045962 - 52045857
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||| ||||| |||||||| |||| ||||    
T  52045962 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctaacgtggcaccctaagtgagatgcc 52045863  T
Q  229 acatgt 234  Q
    ||||||    
T  52045862 acatgt 52045857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 6033859 - 6033780
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | || ||||||||||| || ||||||||| |||||||||  |||||||||||    
T  6033859 atacaaaacagccccctatgtattggatctttgacagttttggcc-cctagaccaattttgactcggtcaacgctgacgtg 6033780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 29775427 - 29775511
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||  |||||||| || ||| || | ||||||||||| || || ||||||||| |||||||||  | |||||||||||||    
T  29775427 atacaaaagagccccctatgtattggatttttggcagttttgaccccctagaccaattttgactcggtcaatgctgacgtgacac 29775511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 33166403 - 33166483
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||  || ||||||||| |||| ||||  |||||||||||    
T  33166403 atacaaaacggccccctatgtattggatttttggcagttttggctccctagaccaattttgacccggtcaacgctgacgtg 33166483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 41205683 - 41205627
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| | |||||||    
T  41205683 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcaatttttat 41205627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 63 - 244
Target Start/End: Original strand, 3377502 - 3377683
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| |||| |||||||||||||||| |||| ||||         ||||||||||||||||||||||||||| |||||    
T  3377502 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtgg 3377601  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||||||| |||||| ||||||| || ||||||||||||||    
T  3377602 cagttttggcccccaaggccaattttgactcggtctacgctgacgtgacgccctaagtgaggtgtcatatgttattttttat 3377683  T

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Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 17760752 - 17760862
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| ||| |||||||| |||||||||||||||||||    
T  17760752 tacaaaaccaccccctaagttttgcatatgtggcagttttggccaccaagatcaattttgactcggtctacactgacgtggcaccctaaatgaggtgcca 17760851  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  17760852 cgtgttatttt 17760862  T

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Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 73 - 242
Target Start/End: Original strand, 44672326 - 44672492
Alignment:
Q  73 agttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcagttttggc 172  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||| |||          |||||||||||||||||||||||||||||||||||||||||||    
T  44672326 agttttagcctcctaactttctcaaagttgtgattttgaccccctaacaaaaat---tacaaaaccgccccctaagttttgcatatgtggcagttttggc 44672422  T
Q  173 ctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
      |||||| ||||| ||| ||||| |||||||||||| |||||||| ||| ||||||| |||||||||||    
T  44672423 gcccaagatcaattttgattcggtctacgctgacgtggcaccctaagtgaagtgccacgtgttatttttt 44672492  T

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Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 23220634 - 23220746
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||| ||| ||||| |||||||||||| |||||||| ||||||||||    
T  23220634 tacaaaaccgccccttaagttttgcacatgtggcggttttggcccccaagaccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcca 23220733  T
Q  230 catgttatttttt 242  Q
    |||||| ||||||    
T  23220734 catgttttttttt 23220746  T

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Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 41997876 - 41997785
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  41997876 cccctaagctttgcatctgtggcagttttggcctccaaggccaattttgactcggtctacgctgacgtgacaccctaagtgaggtgccacat 41997785  T

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Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 16874749 - 16874640
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||| |||||||||||||||  ||||| |||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  16874749 tacaaaaccgccccataagttttgcatctgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 16874650  T
Q  230 catgttattt 239  Q
    | || |||||    
T  16874649 cgtgatattt 16874640  T

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Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 50401439 - 50401547
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||| ||||||||| ||| ||||||||||||| ||||||||||||||    
T  50401439 tacaaaaccgccccctaagttttgcatttgtgacagttttggcc-ccaaggccaattttgactcggtctactctgacgtgacaccttaaatgaggtgcca 50401537  T
Q  230 catgttattt 239  Q
    | | ||||||    
T  50401538 cgtattattt 50401547  T

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Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 32295266 - 32295087
Alignment:
Q  63 gcttaatagtagttttaacctcctaaa-tttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||| ||||||| || |||||| |||||||||||||||||||||||||| ||||         ||||||||| || |||||||||| ||| ||||    
T  32295266 gcttaataggagttttagcc-cctaaactttttcaaagttgcgattttgaccccctaagaaaaaaaattacaaaaccaccacctaagttttacatttgtg 32295168  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
     ||||||||||| ||||  |||||| | ||||||| ||| | |||||| |||||||||||||||||||| |||||||||||    
T  32295167 acagttttggcccccaaagccaattttaactcggtctacccggacgtggcaccctaaatgaggtgccacgtgttatttttt 32295087  T

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Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 46505401 - 46505304
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| || ||||||| ||||| |||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  46505401 taagttttgcatttgcggcagttctggcccccaagaccaattttggctcggtttacgttgacgtgacaccctaagtgaggtgccacatgttttttttt 46505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 25486285 - 25486393
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| | |||  ||||| ||||||||| |||||||||||| |||||||||||||||||||| |    
T  25486285 aaaatcgccctctaagttttgcatctgtggc-gttttggcccctaagttcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgccacgt 25486383  T
Q  233 gttatttttt 242  Q
    ||||||||||    
T  25486384 gttatttttt 25486393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 39642454 - 39642349
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||| ||||||||| || ||||||| | |||||||| ||| ||||||    
T  39642454 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagccaattttgactcggtctatgctgacgcggcaccctaagtgaagtgcca 39642355  T
Q  230 catgtt 235  Q
    | ||||    
T  39642354 cgtgtt 39642349  T

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Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 14978864 - 14978976
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| |||||||||||||||||  ||||| |||||||||| | ||| |||||| ||| | ||| |||||||| ||| |||||||| ||||||||||    
T  14978864 tacaaaactgccccctaagttttgcacctgtggtagttttggccccaaaggccaattttgaattggtctacgctgatgtggcaccctaagtgaggtgcca 14978963  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  14978964 catgttatttttt 14978976  T

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Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 16298294 - 16298191
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||||||| ||||||||| |||||||||||||||  |||| | ||||| ||||| ||| |||||||||||||||| |||| ||||||||||| |||||||    
T  16298294 gccccctatgttttgcatctgtggcagttttggctcccaatatcaattttgacttggtctacgctgacgtgacactctaagtgaggtgccacgtgttatt 16298195  T
Q  239 tttt 242  Q
    ||||    
T  16298194 tttt 16298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 8301591 - 8301497
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgagg 224  Q
    |||||||||| ||||||| |||||||| ||||||||||||| || |||||||||||| ||||||  | ||||||||||||||||||||| |||||    
T  8301591 tacaaaaccgtcccctaaattttgcatctgtggcagttttgacccccaagaccaattttgactcaatctacgctgacgtgacaccctaattgagg 8301497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 30849476 - 30849362
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| |||||||||||||||| ||||  ||||||||||  |||| |||||| | ||| ||| || |||||||| ||||||||| ||||||||||    
T  30849476 tacaaaaccgtcccctaagttttgcatctgtgatagttttggcccacaaggccaattttaacttggtctatgctgacgtaacaccctaagtgaggtgcca 30849377  T
Q  230 catgttattttttat 244  Q
    | |||||||||||||    
T  30849376 cgtgttattttttat 30849362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 12961080 - 12960979
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||||| |||||||  |||||||||||||||  | ||| |||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||    
T  12961080 cccctaaattttgcaactgtggcagttttggctccaaaggccaattttgactcggtctacgctgacgtgacaccctaagtgagatgccacatgttctttt 12960981  T
Q  241 tt 242  Q
    ||    
T  12960980 tt 12960979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 46912422 - 46912325
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| | |||||||||||||| | ||  |||||| |||||| ||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  46912422 taagttttgcatctatggcagttttggcccctaatgccaattttgactctgtttacgctgacgtggcaccctaaatgaggtgccacgtgttttttttt 46912325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 7579732 - 7579844
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||| ||||  | |||| ||||||||| ||||||||| || |||||||| ||||||||||    
T  7579732 tacaaaaccgcccgctaagttttgcacttgtggcaatttttgcccccaaagctaattttgactcggtctacgctgacatggcaccctaagtgaggtgcca 7579831  T
Q  230 catgttatttttt 242  Q
    |||||| ||||||    
T  7579832 catgttttttttt 7579844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 15659237 - 15659125
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| ||||||| ||||||||||||||||||  ||||||||  ||||||||||| ||||||| | |||| | ||| |||||||||| |||||| |||    
T  15659237 tacaaaatcgcccccaaagttttgcatatgtggcgattttggccctcaagaccaattttgactcgatctacgttaacgagacaccctaagtgaggttcca 15659138  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  15659137 cgtgttatttttt 15659125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 46572894 - 46573004
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| |||||||||||||||| ||||||||||| |||| ||||| |||||| ||||| ||| |||||||| |||| ||||||| ||||||||||    
T  46572894 tacaaaaccgtcccctaagttttgcatttgtggcagttt-ggcc-ccaaggccaattttgacttggtctacgctgatgtgagaccctaagtgaggtgcca 46572991  T
Q  230 catgttatttttt 242  Q
    | ||||| |||||    
T  46572992 cgtgttaattttt 46573004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 6569753 - 6569658
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggt 225  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||  ||||||||||| ||| ||||| |||||||||||| ||| |||| ||||||    
T  6569753 tacaaaaccgccccttaagttttacatttgtggcagttttggccctcaagaccaattttgattcggtctacgctgacgtggcactctaagtgaggt 6569658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 18632383 - 18632481
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||  |||| ||||||||||||| |||| ||||||||||| ||| || ||||| ||||||| | ||||||||||| |||||||||||||||||||    
T  18632383 tacaaaattgccctctaagttttgcatttgtgacagttttggcccccaggatcaattttgactcgatctacgctgacgtaacaccctaaatgaggtgcc 18632481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 45738937 - 45739103
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| | |||||||  ||||| ||| ||||||||| |||||||||||| ||||         |||||||||||||| |||||||||||| | |||    
T  45738937 gcttaatagcaattttaactccctaactttctcaaagttgtgattttgaccccctaaggaaaaaac-tacaaaaccgccccttaagttttgcatctatgg 45739035  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    ||||||||||| ||||   ||||| ||||||||| || ||| ||||| |||||||| |||||||||||    
T  45739036 cagttttggcccccaaagtcaattttgactcggtctatgctaacgtggcaccctaagtgaggtgccac 45739103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 49426223 - 49426126
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttta 243  Q
    |||||||||||| |||||||||||||||| ||||  |||||| ||||| ||| ||||||||||||||||||||| | ||||| ||| ||||||||||||    
T  49426223 taagttttgcatttgtggcagttttggcc-ccaatgccaattttgacttggtctacgctgacgtgacaccctaagtaaggtgtcacgtgttatttttta 49426126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 8009796 - 8009880
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    ||||||||||| ||| ||||||||||| |||| |||||||| || |||||||||||| ||||||| | |||||||||||||||||    
T  8009796 tacaaaaccgctcccgaagttttgcatctgtgacagttttgaccaccaagaccaattttgactcgttctacgctgacgtgacacc 8009880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 50226633 - 50226529
Alignment:
Q  134 aaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatg 233  Q
    ||||||||| ||||||||||||  ||| |||||||||||| | ||| | |||  ||||||||| |||||||||||| |||||||| ||||||||||| ||    
T  50226633 aaaccgccctctaagttttgcacctgtagcagttttggccccgaaggctaatattgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtg 50226534  T
Q  234 ttatt 238  Q
    |||||    
T  50226533 ttatt 50226529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 6320630 - 6320741
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||||| ||||||| |||||||| ||||| ||||||| || |  |||||||||  |||||||| |||||||||||||||  |||| |||||||||    
T  6320630 atacaaaaccgtcccctaaattttgcatctgtggtagttttgaccccttagaccaatttcgactcggtctacgctgacgtgaca--ctaagtgaggtgcc 6320727  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  6320728 acgtgtgatttttt 6320741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 20224773 - 20224665
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    |||||| ||||||| |||||| || ||||||||||||||||  |||   ||||| |||||| || |||||||||||| ||||||||||||||| |||| |    
T  20224773 aaaacccccccctatgttttgtat-tgtggcagttttggccctcaatgacaattttgactctgtctacgctgacgtggcaccctaaatgaggtaccacgt 20224675  T
Q  233 gttatttttt 242  Q
    ||||||||||    
T  20224674 gttatttttt 20224665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 23891858 - 23891797
Alignment:
Q  153 gcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    ||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||||    
T  23891858 gcatatgtggcagttttggctcccaagaccaattttgactcggtctacgctgacgtgacacc 23891797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 25085639 - 25085530
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||| |||| ||| |||||||| |  ||||||||||||||||  ||||| ||||| |||| |||| ||| |||||||| |||||||| ||||||||||    
T  25085639 tacaaatccgcaccccaagttttgtacctgtggcagttttggccctcaagatcaattttgacccggtctacactgacgtggcaccctaagtgaggtgcca 25085540  T
Q  230 catgttattt 239  Q
    | ||||||||    
T  25085539 cgtgttattt 25085530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 5287457 - 5287361
Alignment:
Q  146 aagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||||||||  ||||||||| | |||  ||||| |||||||||  ||||||||||| |||||||| ||||||||||  |||||||||||    
T  5287457 aagttttgcatatgtggatgttttggccccgaaggtcaattttgactcggtccacgctgacgtggcaccctaagtgaggtgccaagtgttatttttt 5287361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 14190772 - 14190688
Alignment:
Q  146 aagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    ||||||||||| |||||||||||||||||||||  |||||| ||||||||| |||||||| ||| ||| |||| | |||||||||    
T  14190772 aagttttgcatctgtggcagttttggcctccaatgccaattttgactcggtctacgctgatgtggcactctaagtaaggtgccac 14190688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 1853688 - 1853591
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    |||||||||||||||| |||| || |||||||| |||||||||||| ||||| ||| |||| |||||||||||||||| || || ||||| |||||||||    
T  1853688 cccctaagttttgcatttgtgacaattttggcc-ccaagaccaatt-tgacttggtctacgttgacgtgacaccctaagtggggagccacgtgttatttt 1853591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 1096536 - 1096630
Alignment:
Q  131 acaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggt 225  Q
    |||||||||||| |||||||| |||| |||||||||||||||| | | |  ||||| ||||||||| |||||||||||| || ||||| ||||||    
T  1096536 acaaaaccgccctctaagtttcgcatctgtggcagttttggcccctagggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggt 1096630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 46880974 - 46880880
Alignment:
Q  144 ctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||| |||||||| ||| ||||||||| |||  ||||||||||  |||||||| |||||||||||| |||||||| ||| ||||||  |||||||    
T  46880974 ctaaattttgcatctgtagcagttttgacctgtaagaccaatttcgactcggtctacgctgacgtggcaccctaagtgatgtgccatgtgttatt 46880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 4243197 - 4243310
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  4243197 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 4243296  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  4243297 acgtgtcatttttt 4243310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 6183049 - 6183154
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  6183049 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 6183148  T
Q  229 acatgt 234  Q
    ||||||    
T  6183149 acatgt 6183154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 33811492 - 33811593
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  33811492 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 33811591  T
Q  229 ac 230  Q
    ||    
T  33811592 ac 33811593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 33870961 - 33871074
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  33870961 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 33871060  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  33871061 acgtgtcatttttt 33871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 34988157 - 34988258
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||||||||||  | | |||||||||||| | |  || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  34988157 atacaaaacagccccctaagttttgattctttggcagttttggaccctcagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 34988256  T
Q  229 ac 230  Q
    ||    
T  34988257 ac 34988258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 21259976 - 21259892
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||  |||||||| || ||| || | ||||||||||||||||| ||||||||| || ||||||  |||||||||||||||    
T  21259976 atacaaaatagccccctatgtattggatctttggcagttttggcctcctagaccaattttgtctcggtcaacgctgacgtgacac 21259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 44436825 - 44436932
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| | |||||||||||||||  |||| |||||||| || |||||  ||||| ||||||| | |||||| ||||  |||||||| ||||||||||    
T  44436825 tacaaaactgtcccctaagttttgcacttgtgacagttttgccc-ccaaggtcaattttgactcgatctacgcttacgtcgcaccctaagtgaggtgcca 44436923  T
Q  230 catgttatt 238  Q
    | |||||||    
T  44436924 cgtgttatt 44436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 17692793 - 17692887
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgagg 224  Q
    |||||||| |||||| |||||||||||| |||||| |||||   | ||||| || ||| |||||| || ||||||||||||||||||||| |||||    
T  17692793 atacaaaatcgccccttaagttttgcatttgtggcggttttcatccccaaggcc-attttgactcagtctacgctgacgtgacaccctaagtgagg 17692887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 42406950 - 42407065
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  42406950 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 42407049  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  42407050 acgtgtcaatttttat 42407065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 7061427 - 7061365
Alignment:
Q  177 aagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    |||||||||| ||| ||| |||||||||||||| |||||||| || |||||||| ||||||||    
T  7061427 aagaccaattttgattcgatttacgctgacgtggcaccctaagtgcggtgccacgtgttattt 7061365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 38622470 - 38622575
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||||| | ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  38622470 atacaaaacagccccctatgttttgattctttggcagttttggacctcca-gtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 38622568  T
Q  228 cacatgt 234  Q
    |||||||    
T  38622569 cacatgt 38622575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 48319479 - 48319585
Alignment:
Q  138 cgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttat 237  Q
    |||||| ||| |||||||| | || |||||||| || |||||  ||||| ||||||  |  ||||||||||| || ||||| ||||||||||| ||||||    
T  48319479 cgccccataaattttgcatctatgacagttttgacccccaaggtcaattttgactctatcaacgctgacgtggcatcctaagtgaggtgccacgtgttat 48319578  T
Q  238 tttttat 244  Q
    |||||||    
T  48319579 tttttat 48319585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 14984 - 14887
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||    
T  14984 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtg 14887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 12961155 - 12961110
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttg 110  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||    
T  12961155 ttaatagcagttttagcctcctaattttttcaaagttgcgattttg 12961110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 13791643 - 13791744
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||| ||| |||||||||    
T  13791643 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccttaagtgaggtgcc 13791742  T
Q  229 ac 230  Q
    ||    
T  13791743 ac 13791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 23480121 - 23480049
Alignment:
Q  169 tggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||| ||||| |||||| ||||||||| |||||||| ||| ||||| |||||||||| ||| |||||||||||    
T  23480121 tggcccccaaggccaattttgactcggtctacgctgatgtggcaccc-aaatgaggtgtcacgtgttatttttt 23480049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 28503202 - 28503303
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| | |||||| ||||||  ||| |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  28503202 atacaaaacagtcccctatgttttgattatttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 28503301  T
Q  229 ac 230  Q
    ||    
T  28503302 ac 28503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 41585352 - 41585453
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  41585352 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 41585451  T
Q  229 ac 230  Q
    ||    
T  41585452 ac 41585453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 43677170 - 43677275
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||| ||| |||||||| |||||||||    
T  43677170 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgatgtggcaccctaagtgaggtgcc 43677269  T
Q  229 acatgt 234  Q
    ||||||    
T  43677270 acatgt 43677275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 43914645 - 43914750
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || |  ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  43914645 atacaaaacagccccctatgttttgattctttggcagttttggacccccaatccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 43914744  T
Q  229 acatgt 234  Q
    ||||||    
T  43914745 acatgt 43914750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 47113455 - 47113556
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  47113455 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 47113554  T
Q  229 ac 230  Q
    ||    
T  47113555 ac 47113556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 8770709 - 8770609
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  8770709 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 8770610  T
Q  229 a 229  Q
    |    
T  8770609 a 8770609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 39277097 - 39277173
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||| |||||||| || ||| || | |||||||||| ||| || |||||||||||||||||||  |||||||||||    
T  39277097 aaaacagccccctatgtattggatctttggcagttttagccccctagaccaattgtgactcggtcaacgctgacgtg 39277173  T

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Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 51463055 - 51462971
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| ||||| || || ||| || | ||||||||||| || || ||||||||| |||||||||  |||||||||||||||    
T  51463055 atacaaaacagccccatatgtattggatctttggcagttttgaccccctagaccaattttgactcggtcaacgctgacgtgacac 51462971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 3612172 - 3612238
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtt 197  Q
    ||||||| || ||||||| |||||| |||||||||||||||||| || || |||||| ||||||||||    
T  3612172 tacaaaatcgtcccctaaattttgcctatgtggcagttttggcc-cctaggccaattttgactcggtt 3612238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 22204372 - 22204487
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||| ||||| |||||||| |||||||||    
T  22204372 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgcttacgtggcaccctaagtgaggtgcc 22204471  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  22204472 acgtgtcaatttttat 22204487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 45885195 - 45885080
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  45885195 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 45885096  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  45885095 acgtgtcaatttttat 45885080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 52149584 - 52149699
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | ||||||||| || | || || ||| |  |||||||||  |||||||| || |||||||| |||||||||    
T  52149584 atacaaaacagccccctatgttttgattttttggcagtttgggacccccagtccattgttgactcggtcaacgctgacatggcaccctaagtgaggtgcc 52149683  T
Q  229 acatgttattttttat 244  Q
    || ||||| |||||||    
T  52149684 acgtgttaatttttat 52149699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 20287935 - 20287889
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||    
T  20287935 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgt 20287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 26861341 - 26861439
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| | |||||| ||||||  | | |||||||||||| | ||||| ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  26861341 atacaaaacagtcccctatgttttgattctttggcagttttggaccccaagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 26861439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 47764217 - 47764263
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||    
T  47764217 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgt 47764263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11204574 - 11204675
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| ||| |||| |||||||||    
T  11204574 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcacactaagtgaggtgcc 11204673  T
Q  229 ac 230  Q
    ||    
T  11204674 ac 11204675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 12071780 - 12071825
Alignment:
Q  199 acgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||||| |||||||| ||||||||||||||| | |||||||    
T  12071780 acgctgacgtggcaccctaagtgaggtgccacatgtcaatttttat 12071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 14460548 - 14460447
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||| ||||||| |||||||| |||||||||    
T  14460548 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgttgacgtggcaccctaagtgaggtgcc 14460449  T
Q  229 ac 230  Q
    ||    
T  14460448 ac 14460447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 19830175 - 19830276
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| || ||||| |||||||||    
T  19830175 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcatcctaagtgaggtgcc 19830274  T
Q  229 ac 230  Q
    ||    
T  19830275 ac 19830276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 23356760 - 23356873
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  || |||||||| |||| ||| |||||||||    
T  23356760 atacaaaacagccccctatgttttgattttttggcagttttggacccccagtccattgttgactcggtcaacactgacgtggcaccttaagtgaggtgcc 23356859  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  23356860 acgtgtcatttttt 23356873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 39427478 - 39427591
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  ||||||| |  ||||||||||| |||||||| |||||||||    
T  39427478 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcgatcaacgctgacgtggcaccctaagtgaggtgcc 39427577  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  39427578 acgtgtcatttttt 39427591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 40355915 - 40356016
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| ||| |||| |||||||||    
T  40355915 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcactctaagtgaggtgcc 40356014  T
Q  229 ac 230  Q
    ||    
T  40356015 ac 40356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 44847160 - 44847055
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||| ||  ||||||||||| |||||||| |||||||||    
T  44847160 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcagtcaacgctgacgtggcaccctaagtgaggtgcc 44847061  T
Q  229 acatgt 234  Q
    ||||||    
T  44847060 acatgt 44847055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 50877773 - 50877724
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||||||||||| ||| ||||| |||||||||  |||||||||||    
T  50877773 tggcagttttggcctcctagatcaattttgactcggtcaacgctgacgtg 50877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 4476188 - 4476108
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| ||| |||| || ||| || | |||||||||| ||| || ||||||||| |||||||||  |||||||||||    
T  4476188 atacaaaacagcctcctatgtattggatctttggcagttttagccccctagaccaattttgactcggtcaacgctgacgtg 4476108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 5287887 - 5287835
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccc 115  Q
    ||||||||| |||||||||| | ||| ||| ||||||||||||||||| ||||    
T  5287887 gcttaatagcagttttaaccccttaactttctcaaagttgcgattttggcccc 5287835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 8029085 - 8029141
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| | |||||||    
T  8029085 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacttgtcaatttttat 8029141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 18216857 - 18216813
Alignment:
Q  198 tacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  18216857 tacgctgacgtggcaccctaagtgaggtgccacgtgttttttttt 18216813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 20017508 - 20017560
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| |||||    
T  20017508 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtaatttt 20017560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 36139603 - 36139503
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||| ||  ||||||||||| |||||||| |||||||||    
T  36139603 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcagtcaacgctgacgtggcaccctaagtgaggtgcc 36139504  T
Q  229 a 229  Q
    |    
T  36139503 a 36139503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 48319652 - 48319608
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcct 174  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||    
T  48319652 tacaaagccgccccctaagttttgcaactgtagcagttttggcct 48319608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 49056250 - 49056306
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| | |||||||    
T  49056250 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacttgtcaatttttat 49056306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 50504738 - 50504658
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| ||  |||||||| |||||||||  ||||| |||||    
T  50504738 atacaaaacagccccctatgtattggatctttggcagttttggccccctggaccaattttgactcggtcaacgcttacgtg 50504658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 51250486 - 51250538
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccc 115  Q
    ||||||||  ||||||| || ||||| ||||||||||||||||||||| ||||    
T  51250486 gcttaataacagttttagccccctaactttttcaaagttgcgattttggcccc 51250538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 27904796 - 27904620
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| ||  |||| ||||||||||||||||||||| |||| ||||         ||||||||||||||||||||||||||  |||||    
T  27904796 gcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgccccctaagttttgcacttgtgg 27904697  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    |||||||| || |||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||| ||||||||    
T  27904696 cagttttgtcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttattt 27904620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 20630057 - 20629878
Alignment:
Q  64 cttaatagtagttttaacctcc-taaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    |||||||| ||||||| ||||| ||| |||| |||||||| ||||||| |||||||||         ||||||||||||||||||||||||||| |||||    
T  20630057 cttaatagcagttttagcctccctaacttttccaaagttgtgattttggccccttaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtgg 20629958  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
     |||||||||||||| |||||||| ||||||| | |||||||||||| |||||||| ||||||||||| |||||||||||    
T  20629957 aagttttggcctccaggaccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgttatttttt 20629878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 32392032 - 32391853
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    |||||||||  ||||||||  ||||| ||||||||||||||||||||  |||| ||||         |||||||||||||| |||||||||||| ||||     
T  32392032 gcttaatagctgttttaactccctaactttttcaaagttgcgattttagccccctaagaaaaaaaactacaaaaccgccccttaagttttgcatgtgtga 32391933  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| | ||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  32391932 cagttttgacatccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacatgttatttttt 32391853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 37898029 - 37897852
Alignment:
Q  64 cttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggc 163  Q
    |||||||| ||||||| || ||||| ||||||||||||||||||||| |||| ||||         |||||||||||||| |||||||||||||||||||    
T  37898029 cttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccc-taagttttgcatatgtggc 37897931  T
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||  |||| ||| ||||| |||||||||| ||||||    
T  37897930 agttttggcctccaagaccaattttgactcggtctatgctgacgtagcaccttaagtgaggcgccacatgttttttttt 37897852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 3334014 - 3333835
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||||||||| || ||||| |||| |||||||||||||||| |||| ||||         ||||||||||| || ||||||||||||||||||    
T  3334014 gcttaatagtagttttagccccctaacttttccaaagttgcgattttggccccctaagaagaaaaactacaaaaccgctccataagttttgcatatgtgg 3333915  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||| |||||  ||||| ||||||||| |||||||||||| |||||||| ||||||||||  |||||| ||||    
T  3333914 cagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgttatatttt 3333835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 2974702 - 2974813
Alignment:
Q  131 acaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||  |||||| ||||||||| |||||||||||| |||||||| |||||||||||    
T  2974702 acaaaaccgccccctaagttttgcatctgtggcagttttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccac 2974801  T
Q  231 atgttatttttt 242  Q
    |||| |||||||    
T  2974802 atgtaatttttt 2974813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 22300668 - 22300780
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||| ||||||||| |||||||||||||||| | ||||||||||||| ||||||||| |||| ||||||| |||||||| ||||||||||    
T  22300668 tacaaaaccgtcccttaagttttgtatatgtggcagttttgacttccaagaccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgcca 22300767  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  22300768 catgttatttttt 22300780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 12406285 - 12406174
Alignment:
Q  131 acaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||| |||||| || |||||||||||| |||||||| |||||||||||    
T  12406285 acaaaaccgccccctaagttttacatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccac 12406186  T
Q  231 atgttatttttt 242  Q
     |||||||||||    
T  12406185 gtgttatttttt 12406174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 36798239 - 36798349
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| ||| |||||||| ||| |||| ||||||||||    
T  36798239 tacaaaaccaccccctaagttttgcatctgtggcagttttggcccccaagaccaatt-tgactcggtctacactgacgtggcactctaagtgaggtgcca 36798337  T
Q  230 catgttattttt 241  Q
    ||||||||||||    
T  36798338 catgttattttt 36798349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 40276275 - 40276162
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| |||||||||||||||||||||||| ||||| || ||||| | |||| |||| |||| ||||||||||||||||||||| ||||||||||    
T  40276275 tacaaaaccgtcccctaagttttgcatatgtggcaattttgacccccaaggctaattttgacccggtctacgctgacgtgacaccctaagtgaggtgcca 40276176  T
Q  230 catgttatttttta 243  Q
    |||||| |||||||    
T  40276175 catgttttttttta 40276162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 31080544 - 31080654
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||| |||||| | ||||||| || ||||||||| |||||||| ||||||||||    
T  31080544 tacaaaaccaccccctaagttttgcatctgtggcagttttggcccccaaggccaattttaactcggtctatgctgacgtggcaccctaagtgaggtgcca 31080643  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  31080644 cgtgttatttt 31080654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 9852854 - 9852966
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| ||||||||||||||||||| |||||||||||||||  ||||| |||||| ||||| | | |||||||||||| |||||||| ||||||||||    
T  9852854 tacaaaatcgccccctaagttttgcatctgtggcagttttggctcccaaggccaattttgacttgatctacgctgacgtggcaccctaagtgaggtgcca 9852953  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  9852954 cgtgttatttttt 9852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 35166363 - 35166471
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||| |||   ||||| ||||||||| ||||||||| ||||||||||| ||||||||||    
T  35166363 tacaaaatcgccccctaagttttgcacatgtggcggttttggccttcaatgtcaattttgactcggtctacgctgacatgacaccctaagtgaggtgcca 35166462  T
Q  230 catgttatt 238  Q
    |||||||||    
T  35166463 catgttatt 35166471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 3999331 - 3999232
Alignment:
Q  143 cctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| ||||| ||| |||||||||||| |||| ||| |||||||||||||||||||||||    
T  3999331 cctaagttttacatatgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccttaagtgaggtgccacatgttatttttt 3999232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 26702504 - 26702613
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||| ||||| ||  |||||||| |||||||| ||||||||||    
T  26702504 tacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcca 26702602  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  26702603 cgtgttatttt 26702613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 26972237 - 26972346
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||| ||||| ||  |||||||| |||||||| ||||||||||    
T  26972237 tacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcca 26972335  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  26972336 cgtgttatttt 26972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 65 - 240
Target Start/End: Original strand, 20512197 - 20512374
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccctta--agnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||| ||||||| || | ||| ||||||||||| | |||||||||||||||  ||        ||||||||| |||||||||||||||||  |||||    
T  20512197 ttaatagcagttttagccccttaattttttcaaagtcgtgattttgaccccttagaagaaaaaaaaatacaaaactgccccctaagttttgcacctgtgg 20512296  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
     ||||||| || |||||||||||| ||||||||| |||||| || || |||||||| ||||||||||| |||||||||    
T  20512297 tagttttgacccccaagaccaattttgactcggtctacgctaacatggcaccctaagtgaggtgccacgtgttatttt 20512374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 39574316 - 39574413
Alignment:
Q  140 ccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||    
T  39574316 ccccctaagttttgcat--gtggcagttttggcccccaagaccaatt-tgactcggtctacgctgacgtgacaccataagtgacgtgccacatgttattt 39574412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 25910791 - 25910903
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||| |||| |||||||  |||||||||||||||| |||||  ||||| ||||||||| |||||||||||| |||||||| ||||||| ||    
T  25910791 tacaaaaccaccctctaaattttgcacctgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtca 25910890  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  25910891 catgttatttttt 25910903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 19131746 - 19131661
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccc 215  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| | ||| |||||| ||||||||| |||||||||||| |||||    
T  19131746 tacaaaaccgccccctaagttttgcatctgtgacagttttggccccgaaggccaattttgactcggtctacgctgacgtggcaccc 19131661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 19341010 - 19340898
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||   |||||||||||||| |||||||||||| | | ||||  |||||| |||||||||  ||| ||||||| |||||||||||||||||||    
T  19341010 tacaaaaccgtttcctaagttttgcatctgtggcagttttagtccccaaagccaattttgactcggtcaacgttgacgtggcaccctaaatgaggtgcca 19340911  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  19340910 cgtgttatttttt 19340898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 18402989 - 18403166
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtggc 163  Q
    |||||||||||||||||| ||||| |||||||||||||  |||||| |||  ||||        | ||||||| | | ||||||||||||||| | ||||    
T  18402989 ttaatagtagttttaacc-cctaattttttcaaagttgtaattttggccctctaagaaaaaaaaactacaaaatcactccctaagttttgcatctctggc 18403087  T
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||| || |||||||||||| |||||| || |||| ||||||| |||||||| ||||||| ||| || ||||||||    
T  18403088 agttttgacccccaagaccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgtcacgtgctatttttt 18403166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 16132812 - 16132923
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||  | |||||||||||| | ||||| |||||| |||||  || |||||||| ||| || ||||| ||||||||||    
T  16132812 tacaaaaccgccccctaagttttgcacctatggcagttttggtccccaaggccaattttgactttgtctacgctgatgtggcatcctaagtgaggtgcca 16132911  T
Q  230 catgttattttt 241  Q
      ||||||||||    
T  16132912 tgtgttattttt 16132923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 24779276 - 24779453
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||| || || |||         |||||||||| | | |||||||||| | | |||    
T  24779276 gcttaatagtagttttagcctcctaacttttttaaagttgcgattttgtccact-aagaaaaaaaactacaaaaccgtctc-taagttttgcctctatgg 24779373  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||   |||| ||||||| ||||||||| |||||||||||| ||||| || |||| || ||| |||||||||||    
T  24779374 cagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgttatttttt 24779453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 6130470 - 6130390
Alignment:
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||||| |||||  ||||| ||||||||| || | |||||||||||||||| |||||||||||||||||||||||||    
T  6130470 cagttttggcc-ccaaggtcaattttgactcggtctatgttgacgtgacaccctaagtgaggtgccacatgttattttttat 6130390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 26563075 - 26563168
Alignment:
Q  149 ttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| ||||||| |||||||| |||||  ||||| ||||||||||| |||||||||| |||||||  ||||||||||| ||||| |||||    
T  26563075 ttttgcatctgtggcaattttggcccccaaggtcaattttgactcggtttccgctgacgtggcaccctacgtgaggtgccacgtgttaattttt 26563168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 230
Target Start/End: Original strand, 24405493 - 24405657
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||| |||||||  | ||||| ||||||||||||||||||||||| || | ||         ||||||||||||  ||||||||||||| | |||||    
T  24405493 ttaatagcagttttagtcccctaactttttcaaagttgcgattttgactccctgagaaaaaaaactacaaaaccgccaactaagttttgcatctttggca 24405592  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    ||||||||| ||| | |||||| ||||||||| || ||| ||||| | |||||| |||||||||||    
T  24405593 gttttggcc-ccatggccaattttgactcggtctatgctaacgtggctccctaagtgaggtgccac 24405657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 25363893 - 25364005
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| | |||||||||||||||  ||||| |||||||||| | ||   ||||| ||| ||||| ||||||||||||||||||||||||||||| |     
T  25363893 tacaaaactgtcccctaagttttgcaattgtggtagttttggccccaaaagtcaattttgattcggtctacgctgacgtgacaccctaaatgaggtgtct 25363992  T
Q  230 catgttatttttt 242  Q
      |||||||||||    
T  25363993 tgtgttatttttt 25364005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 30604333 - 30604221
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||  |||||||||||||  |    || |||||| |||||| || |||||||||||| |||||||| |||||||||     
T  30604333 tacaaaaccgccccctaagttttgcacctgtggcagttttgcacctgtaggccaattttgactctgtctacgctgacgtggcaccctaagtgaggtgccc 30604234  T
Q  230 catgttatttttt 242  Q
      |||||||||||    
T  30604233 agtgttatttttt 30604221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 34320185 - 34320081
Alignment:
Q  138 cgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttat 237  Q
    ||||||||||||||| ||| |||||||||||||||| ||||   ||||| ||||| ||| ||| |||||||| |||||| | || ||||| |||||||||    
T  34320185 cgccccctaagttttacatttgtggcagttttggcccccaaagtcaattttgacttggtctacactgacgtggcacccttagtggggtgctacatgttat 34320086  T
Q  238 ttttt 242  Q
    |||||    
T  34320085 ttttt 34320081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 43098272 - 43098161
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||| || |||||||||||  ||| |||||||||||| || | | ||||| |||||| || |||||||||||| |||||||| |||||||||     
T  43098272 tacaaaaccgcgcc-taagttttgcacctgtagcagttttggcccccgatatcaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccg 43098174  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  43098173 cgtgttatttttt 43098161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 28446087 - 28446181
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    |||||||||||| |||| ||| ||||||| | ||| |||||| ||||||||| ||||||||| ||||||||||  ||||||| ||| ||||||||    
T  28446087 taagttttgcatttgtgacagctttggcccctaaggccaattttgactcggtatacgctgacctgacaccctacgtgaggtgtcacgtgttattt 28446181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 7219565 - 7219666
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| ||||||||||||||||||    
T  7219565 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaaatgaggtgcc 7219664  T
Q  229 ac 230  Q
    ||    
T  7219665 ac 7219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 10029318 - 10029217
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  10029318 atacaaaacagccccctatgttttgattttttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 10029219  T
Q  229 ac 230  Q
    ||    
T  10029218 ac 10029217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 39528833 - 39528938
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || | | |  |||||||||  |||||||||||||||||||| |||||||||    
T  39528833 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtctattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 39528932  T
Q  229 acatgt 234  Q
    ||||||    
T  39528933 acatgt 39528938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 38163662 - 38163578
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| ||| |||| || ||| || | |||||||||||||| || ||||||||| |||||||||  |||||||||||||||    
T  38163662 atacaaaacagcctcctatgtattggatctttggcagttttggccccctagaccaattttgactcggtcaacgctgacgtgacac 38163578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 35678271 - 35678225
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  |||||||||||||||||||| |||||||||||||||    
T  35678271 tgactcggtcaacgctgacgtgacaccctaagtgaggtgccacatgt 35678225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 223140 - 223043
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | ||||| ||| |  |||||||||  ||||||| |||||||||||| |||||||    
T  223140 atacaaaacagccccctatgttttgattctttggcagttttggaccccaagtccattgttgactcggtcaacgctgatgtgacaccctaagtgaggtg 223043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 4096519 - 4096619
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | ||| | ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  4096519 atacaaaacagccccctatgttttgattctttggcagttttggacccca-gtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 4096617  T
Q  229 ac 230  Q
    ||    
T  4096618 ac 4096619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 13765507 - 13765406
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||||||||  |||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| ||||||||||||||||||    
T  13765507 atacaaaacagccccctatattttgattctttggcagttttggacccctagtccattgttgactcggtcaacgctgacgtggcaccctaaatgaggtgcc 13765408  T
Q  229 ac 230  Q
    ||    
T  13765407 ac 13765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 16521221 - 16521326
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | ||  | ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  16521221 atacaaaacagccccctatgttttgattctttggcagttttggacccccggtccattgctgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 16521320  T
Q  229 acatgt 234  Q
    ||||||    
T  16521321 acatgt 16521326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 19849789 - 19849676
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||| ||| |||||||| |||||||||    
T  19849789 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgatgtggcaccctaagtgaggtgcc 19849690  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  19849689 acgtgtcatttttt 19849676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 28736507 - 28736608
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||  |||||||| ||||||  | | |||||||||||| | || || |||||  |||||||||  ||||||||||| |||||||| |||||||||    
T  28736507 atacaaaatagccccctatgttttgattctttggcagttttggacccccagtccaatgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 28736606  T
Q  229 ac 230  Q
    ||    
T  28736607 ac 28736608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 30894362 - 30894257
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||  || ||| |  ||| |||||  ||||||||||| |||||||| |||||||||    
T  30894362 atacaaaacagccccctatgttttgattctttggcagttttggactctcagtccattgttgaatcggtcaacgctgacgtggcaccctaagtgaggtgcc 30894263  T
Q  229 acatgt 234  Q
    ||||||    
T  30894262 acatgt 30894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 34606616 - 34606515
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  34606616 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 34606517  T
Q  229 ac 230  Q
    ||    
T  34606516 ac 34606515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 36798489 - 36798379
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| ||| |||||||||||||||||  ||| ||||         | ||||||||||||||||||||||||  ||| |    
T  36798489 gcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaagaaaaaaaactgcaaaaccgccccctaagttttgcaactgtag 36798390  T
Q  163 cagttttggcc 173  Q
    |||||||||||    
T  36798389 cagttttggcc 36798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 42739833 - 42739732
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| |||||| || | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  42739833 atacaaaacaaccccctatgttttgaatctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 42739734  T
Q  229 ac 230  Q
    ||    
T  42739733 ac 42739732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 3020840 - 3020725
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||||| | ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  3020840 atacaaaacagccccctatgttttgattctttggcagttttggacctcca-gtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 3020742  T
Q  228 cacatgttattttttat 244  Q
    ||| ||| | |||||||    
T  3020741 cacgtgtcaatttttat 3020725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 28446250 - 28446194
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||||| |||||||||||||||  ||| |||||||||||| |||||| |||||    
T  28446250 tacaaaaccgtcccctaagttttgcaactgtagcagttttggcccccaagatcaatt 28446194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 31157080 - 31157036
Alignment:
Q  198 tacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||    
T  31157080 tacgctgacgtgacaccctaagtgaggtgccacttgttttttttt 31157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 38973453 - 38973537
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| ||||| || || ||| || | ||||||||||| ||||  ||||||||| |||||||||  |||||||||||||||    
T  38973453 atacaaaacagccccttatgtattggatctttggcagttttgacctcgtagaccaattttgactcggtcaacgctgacgtgacac 38973537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 8755080 - 8755195
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||    | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  8755080 atacaaaacagccccctatgttttgatgctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 8755179  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  8755180 acgtgtcaatttttat 8755195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 932035 - 931989
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||| ||||||||||| ||| |||| |||||||||||||||    
T  932035 tgactcggttaacgctgacgtggcacactaagtgaggtgccacatgt 931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 10332233 - 10332147
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccc 215  Q
    ||||||||| |||||||| || ||| || | |||||||||||||||||||  ||| || |||||  || | ||||||||||||||||    
T  10332233 atacaaaacagccccctatgtattgtatctttggcagttttggcctccaatgccacttttgacttagtcttcgctgacgtgacaccc 10332147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 35306889 - 35306847
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||||||||  |||||||||||||||||||| |||||||||||    
T  35306889 tgactcggtcaacgctgacgtgacaccctaagtgaggtgccac 35306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 42947527 - 42947573
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||    
T  42947527 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgt 42947573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 1055438 - 1055535
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||    
T  1055438 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtg 1055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 8340206 - 8340105
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||  | || || |||||  |||||||||  ||||||||||| |||||||| |||||||||    
T  8340206 atacaaaacaaccccctatgttttgattctttggcagttttgaacccccagtccaatgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 8340107  T
Q  229 ac 230  Q
    ||    
T  8340106 ac 8340105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 12049363 - 12049262
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||| ||||||| |||||||| |||||||||    
T  12049363 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgatgacgtggcaccctaagtgaggtgcc 12049264  T
Q  229 ac 230  Q
    ||    
T  12049263 ac 12049262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 22471853 - 22471804
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    |||||||||||||| || ||||||||| |||||||||  |||||||||||    
T  22471853 tggcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 22471804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 28620106 - 28620207
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | ||||| |||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  28620106 atacaaaacagccccctatgttttgattctttggcaattttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 28620205  T
Q  229 ac 230  Q
    ||    
T  28620206 ac 28620207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 37897785 - 37897842
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctcc-aagaccaatt 186  Q
    ||||||||||||||||||||||||||  ||| || ||||||||| || ||||||||||    
T  37897785 tacaaaaccgccccctaagttttgcaattgtagctgttttggcccccgaagaccaatt 37897842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 40767955 - 40768056
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  40767955 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 40768054  T
Q  229 ac 230  Q
    ||    
T  40768055 ac 40768056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 4887522 - 4887598
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||| |||||||| || ||| || | |||||||||||||| || ||||||||| | |||||||  |||||||||||    
T  4887522 aaaacagccccctatgtattggatctttggcagttttggccccctagaccaattttaactcggtcaacgctgacgtg 4887598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 7623707 - 7623651
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| |||| ||||    
T  7623707 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcatttattat 7623651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 20040748 - 20040712
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggt 196  Q
    |||||||||||||| |||||||||||| |||||||||    
T  20040748 tggcagttttggcccccaagaccaattttgactcggt 20040712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 21066475 - 21066519
Alignment:
Q  198 tacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| ||| |||||||| ||||||||||| |||||||||||    
T  21066475 tacgctgatgtggcaccctaagtgaggtgccacgtgttatttttt 21066519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 26366012 - 26365932
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || ||| ||||| |||||||||  ||| |||||||    
T  26366012 atacaaaacagccccctatgtattggatctttggcagttttggccccctagatcaattttgactcggtcaacgatgacgtg 26365932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 34734260 - 34734212
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgtta 236  Q
    |||||||||  |||||||||||||||||||  ||||||||||| |||||    
T  34734260 tgactcggtcaacgctgacgtgacaccctaggtgaggtgccacgtgtta 34734212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 40279283 - 40279231
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccc 115  Q
    ||||||| ||| |||||||||||||  ||||| ||||||| ||||||||||||    
T  40279283 gcttaattgtatttttaacctcctatctttttaaaagttgtgattttgacccc 40279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 42779355 - 42779311
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    |||||||||  ||||| |||||||||||||| |||||||||||||    
T  42779355 tgactcggtcaacgctaacgtgacaccctaagtgaggtgccacat 42779311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 8025029 - 8024914
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||| || |||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||| |||||||||||| ||    
T  8025029 atacaaaatcgtcccctaagttttgcatatgtggtagttttggcctccaagaccaattttaactcggtctacgctgacgtgacatcctaaatgaggtacc 8024930  T
Q  229 acatgttattttttat 244  Q
    ||||||||||||||||    
T  8024929 acatgttattttttat 8024914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 44436644 - 44436530
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  44436644 tacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 44436545  T
Q  230 catgttattttttat 244  Q
    | |||||||||||||    
T  44436544 cgtgttattttttat 44436530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 33329863 - 33329749
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  33329863 tacaaaaccgtcccctaagtattgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 33329764  T
Q  230 catgttattttttat 244  Q
    | |||||||||||||    
T  33329763 cgtgttattttttat 33329749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 51315797 - 51315618
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| |||  |||||||||||||||| |||| ||||         ||||||||||||||||||||||||||  |||||    
T  51315797 gcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcacctgtgg 51315698  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  51315697 cagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttttttttt 51315618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 44586097 - 44585920
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||| ||||||| || ||||| |||  |||||||||||||||| |||| ||||         ||||||||||||||||||||||||| | |||||||    
T  44586097 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcttctgtggca 44585998  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||| ||| | |||||| ||||||||| |||||||||||| |||||||| ||||||||||  |||||||||||    
T  44585997 gttttggcccccacggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgttatttttt 44585920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 48348569 - 48348393
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||||  || |||||         ||||||| |||||| ||||||||||||||||||||    
T  48348569 ttaatagtagttttatccccctaacttttttaaagttgcgattttggtcctttaagaaaaataactacaaaatcgccccttaagttttgcatatgtggca 48348470  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||| || ||||| |||||| ||||||||| |||||||||||| ||| |||| ||||||||||| |||| ||||||    
T  48348469 gttttgacc-ccaagcccaattttgactcggtctacgctgacgtggcacgctaagtgaggtgccacgtgttttttttt 48348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 43747526 - 43747418
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||| || ||||| ||||||||| |||||||||||| || ||||| ||||||||||    
T  43747526 tacaaaaccgccccctaagttttgcatttatggcagttttggcccccacgatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcca 43747427  T
Q  230 catgttatt 238  Q
    | |||||||    
T  43747426 cgtgttatt 43747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 54719308 - 54719144
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||| | |||||||||| ||||| || |||||||||||||||||| || | ||||       ||  |||||||||||||||||||||||||||||      
T  54719308 gcttaatggcagttttaaccccctaacttattcaaagttgcgattttggcctcctaagaaaaaacta--caaaaccgccccctaagttttgcatatgtac 54719211  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||| ||||||| ||||  |||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  54719210 caggtttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 54719144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 38957846 - 38957980
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||||||| ||| |||||        | ||||||||||||||||||||||||||| ||||    
T  38957846 gcttaatagcagttttagcctcctaatttttttaaagttgcgattttggccctttaagaaaaaaaaactacaaaaccgccccctaagttttgcatttgtg 38957945  T
Q  162 gcagttttggcctccaagaccaattgtgactcggt 196  Q
    |||||||||||| ||||| |||||| |||||||||    
T  38957946 gcagttttggcccccaaggccaattttgactcggt 38957980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 44433310 - 44433200
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||| |||||||| ||| || ||||| | ||||| ||    
T  44433310 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaaggccaattttgacccggtctacgctgatgtggca-cctaagttaggtgtca 44433212  T
Q  230 catgttattttt 241  Q
    | ||||||||||    
T  44433211 cgtgttattttt 44433200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 1814866 - 1814691
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| |||||||| |||| ||||||| ||||||||  ||| ||||         |||||||||| ||||||||||||||||    ||    
T  1814866 gcttaatagcagttttagcctcctaacttttccaaagtttcgattttggacccctaagaaaaaaac-tacaaaaccgtcccctaagttttgcat----gg 1814772  T
Q  163 cagttttggcctcc-aagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||| || |||| ||||| ||||||||| |||||||||||| |||||||| ||||||||||| |||||||||||    
T  1814771 cagttttggccccctaagatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttttt 1814691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 38177259 - 38177349
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgtt 235  Q
    ||||||||||||||||| || |||||||| ||||| |||||| ||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  38177259 taagttttgcatatgtgacatttttggcccccaaggccaattttgactcggtttgcgctgacgtggcaccctaagtgaggtgccacatgtt 38177349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 36677745 - 36677649
Alignment:
Q  142 ccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    ||||||| ||||||| ||||||| ||||||||||||||  ||||| |||||||||||||||||||||| |||| ||| ||||||||||| |||||||    
T  36677745 ccctaagatttgcatttgtggcaattttggcctccaaggtcaattttgactcggtttacgctgacgtggcaccttaagtgaggtgccacgtgttatt 36677649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 36687825 - 36687729
Alignment:
Q  142 ccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    ||||||| ||||||| ||||||| |||||||||||||   ||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  36687825 ccctaagatttgcatttgtggcaattttggcctccaatgtcaattttgactcggtttacgctgacgtggcaccctaagtgaggtgccacgtgttatt 36687729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 54464161 - 54464341
Alignment:
Q  61 ttgcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgt 160  Q
    ||||||||||| |||||||  | ||||| ||||  |||||| ||||||||| ||||||||         |||||||| | ||||||||||||||||||||    
T  54464161 ttgcttaatagcagttttagtcccctaacttttctaaagttacgattttgatcccttaagaaaaagaactacaaaactgtcccctaagttttgcatatgt 54464260  T
Q  161 ggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttt 241  Q
    |||||||||| || |||||  ||||| ||||||||| |||||| ||||| |||| ||| ||||| ||| | ||||||||||    
T  54464261 ggcagttttgacccccaaggtcaattttgactcggtctacgctcacgtggcaccttaagtgaggcgccgcgtgttattttt 54464341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 19404640 - 19404530
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| || ||| ||||||||||| ||||| ||||||||||| ||||| |||||| |||||  || |||||| |||||||||||||| ||||||||||    
T  19404640 tacaaaatcgtcccttaagttttgcacatgtgacagttttggcccccaaggccaattttgacttagtctacgctaacgtgacaccctaagtgaggtgcca 19404541  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  19404540 cgtgttatttt 19404530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 86644 - 86753
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    ||||| || ||||||||||||||  ||| |||||||||||| |||||||||||| ||||||| | ||||||||| ||  ||||||| ||||||||||| |    
T  86644 aaaactgcgccctaagttttgcacttgtagcagttttggcccccaagaccaattttgactcgatctacgctgacatgggaccctaagtgaggtgccacgt 86743  T
Q  233 gttatttttt 242  Q
    ||||||||||    
T  86744 gttatttttt 86753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 28712522 - 28712635
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||  ||||| |||| | ||||||||| ||| |||||||| |||||||| ||||||||||    
T  28712522 tacaaaatcgccccctaagttttgcatctgtagcagttttagcacccaaggccaactttgactcggtctacactgacgtggcaccctaagtgaggtgcca 28712621  T
Q  230 catgttatttttta 243  Q
    | ||||| ||||||    
T  28712622 cgtgttacttttta 28712635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 578714 - 578551
Alignment:
Q  73 agttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcagttttggc 172  Q
    ||||||| |||||||| |||| |||||||||||||||| ||||| |||         |||||||||||||| |||||||| ||  ||||| |||||||||    
T  578714 agttttagcctcctaacttttccaaagttgcgattttggcccct-aagaaaaaaaactacaaaaccgcccc-taagtttttcacctgtggtagttttggc 578617  T
Q  173 ctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    | ||||| |||||| ||||||||| || ||||||||| ||||||||  |||||||||| |||||||    
T  578616 ccccaaggccaattttgactcggtctatgctgacgtggcaccctaagcgaggtgccacgtgttatt 578551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 240
Target Start/End: Original strand, 3916432 - 3916607
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||| |||||||||||  |||||| ||||||| ||||| |||         ||||||| ||| | ||||||||||||| |||||    
T  3916432 gcttaatagcagttttaacc-cctaaatttttttaagttgtgattttggcccct-aagaaaaaaaactacaaaatcgctcactaagttttgcatctgtgg 3916529  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||||||||| ||||   ||||| ||||||||| ||| || ||||| |||||||| ||||||||||| |||||||||    
T  3916530 cagttttggcccccaaagtcaattttgactcggtctacactaacgtggcaccctaagtgaggtgccacgtgttatttt 3916607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 25843441 - 25843541
Alignment:
Q  138 cgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttat 237  Q
    ||||||||||||||||||| |||||||||||||| | ||||| |||||| |||| | || |||||||||||| ||||||||  |||||||||| ||||||    
T  25843441 cgccccctaagttttgcatctgtggcagttttggtccccaaggccaattttgacccagtctacgctgacgtggcaccctaagcgaggtgccacgtgttat 25843540  T
Q  238 t 238  Q
    |    
T  25843541 t 25843541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 46226699 - 46226877
Alignment:
Q  64 cttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggc 163  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||| ||  | | || |         ||||| ||| ||||||| ||||||||  ||||||    
T  46226699 cttaatagtagttttaatctcctaactttctcaaagttgcgattgtggtctcctatgaaaaaaaattacaataccaccccctatgttttgcacctgtggc 46226798  T
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||| || |  |||||| | ||||||| |||||||||||| |||||||| ||||||||||| ||||| |||||    
T  46226799 agttttggcccccgatgccaattttaactcggtatacgctgacgtggcaccctaagtgaggtgccacgtgttaattttt 46226877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 53184596 - 53184688
Alignment:
Q  149 ttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||| ||||||||||| ||| ||| ||| |||||||||||    
T  53184596 ttttgcatttgtggcagttttg-cctccaaaaccaattttgactcggtctacgctgacttgacaccctaagtgatgtgtcacgtgttatttttt 53184688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 7218397 - 7218285
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||| ||| | |||||||||| ||| |||||||||||||||| |||||  ||||| ||||| | | || |||||||||||||| ||| ||||||||||    
T  7218397 tacaaagccgtctcctaagttttacatctgtggcagttttggcccccaaggtcaattttgacttgatctatgctgacgtgacaccttaagtgaggtgcca 7218298  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  7218297 cgtgttatttttt 7218285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 47189840 - 47189728
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||| || |||||||||||| ||||||||||||| ||  ||||| ||||| |||||  || ||| ||||||||||||| ||| ||||||| ||    
T  47189840 tacaaaaccgctccataagttttgcatttgtggcagttttgaccctcaagatcaattttgacttcgtctacactgacgtgacaccttaagtgaggtgtca 47189741  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  47189740 cgtgttatttttt 47189728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 28204732 - 28204621
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||  ||||| ||||||||| || ||||| |||||||||||||||  |||||| ||||||||| ||| |||||||| || ||||| ||||||| ||    
T  28204732 tacaaaattgccccttaagttttgtatttgtggtagttttggcctccaatgccaattttgactcggtctacactgacgtggcatcctaattgaggtgtca 28204633  T
Q  230 catgttattttt 241  Q
    | ||||||||||    
T  28204632 cgtgttattttt 28204621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 44624703 - 44624805
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    |||||| ||||||||| |||||||||||||| | ||||| |||||| ||||||||| |||||||||||| |||||||| ||||||| ||  ||||||| |    
T  44624703 cccctatgttttgcatctgtggcagttttggtc-ccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgacatgtgttattat 44624801  T
Q  241 ttat 244  Q
    ||||    
T  44624802 ttat 44624805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 20432431 - 20432318
Alignment:
Q  130 tacaaaaccgccccctaagttttg-catatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||| | |||||||||||||  ||| ||||||||||||| || |||||  ||||| ||||| ||| |||||||||||  |||||||| |||||||||    
T  20432431 tacaaaatcaccccctaagtttttacatctgtggcagttttgacccccaaggacaattttgacttggtctacgctgacgtagcaccctaagtgaggtgcc 20432332  T
Q  229 acatgttatttttt 242  Q
    || |||||||||||    
T  20432331 acgtgttatttttt 20432318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 27178393 - 27178288
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||||||||||||||||| ||||| ||||||| || ||||  |||||| ||||| ||| |||||||| ||| |||||||  ||||||| ||    
T  27178393 tacaaaaccaccccctaagttttgcatctgtggtagttttgacccccaatgccaattttgacttggtctacgctgatgtgtcaccctacgtgaggtgtca 27178294  T
Q  230 catgtt 235  Q
    ||||||    
T  27178293 catgtt 27178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 1938384 - 1938496
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||  ||||| ||||||||||  |||   ||||| ||||||||| ||||||||| || |||||||| ||||||| ||    
T  1938384 tacaaaaccgccccttaagttttgcacctgtggtagttttggcccacaaagtcaattttgactcggtctacgctgacatggcaccctaagtgaggtgtca 1938483  T
Q  230 catgttatttttt 242  Q
    | ||||| |||||    
T  1938484 cgtgttacttttt 1938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 14856791 - 14856691
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||||| ||||||| ||||| ||||||||||| ||||   ||||| ||| ||||| ||||||||||||||||| ||| ||| ||||||| |||||||||    
T  14856791 cccctaaattttgcacatgtgccagttttggcccccaatgtcaattttgattcggtctacgctgacgtgacaccttaagtgatgtgccacgtgttatttt 14856692  T
Q  241 t 241  Q
    |    
T  14856691 t 14856691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 43586875 - 43586697
Alignment:
Q  60 tttgcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatg 159  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||| || | ||||         ||||||| || | |||| ||||||||| ||    
T  43586875 tttgcttaatagtagttttagcctcccaactttttcaaagttgcgattttggcctcctaagaaaaaac--tacaaaatcgtctcctatgttttgcatttg 43586778  T
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    || ||||| ||||| |  | ||||||| ||||| ||| |||||||||||| |||||||| |||  || ||| |||||||||||    
T  43586777 tgacagttatggcccctgataccaattttgacttggtctacgctgacgtggcaccctaagtga--tgtcacgtgttatttttt 43586697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 52008319 - 52008421
Alignment:
Q  139 gccccctaagttttgcatatgtggcagtttt--ggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgtta 236  Q
    |||| |||| |||||||||||||||||||||  |||| | || |  |||| ||||||||| ||||||||||||||||||||| ||||||| ||| |||||    
T  52008319 gccctctaatttttgcatatgtggcagttttttggcccctaaaattaattttgactcggtctacgctgacgtgacaccctaagtgaggtgtcacgtgtta 52008418  T
Q  237 ttt 239  Q
    |||    
T  52008419 ttt 52008421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 35359067 - 35359176
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    |||| |||||||||| ||||||| ||||||||||||||||| | ||   ||||| ||||||||| |||||||||||| |||| ||| ||| || |||| |    
T  35359067 aaaatcgccccctaatttttgcacatgtggcagttttggcccctaatgtcaattttgactcggtctacgctgacgtggcaccttaagtgatgtcccacgt 35359166  T
Q  233 gttatttttt 242  Q
    ||| ||||||    
T  35359167 gttttttttt 35359176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 36567121 - 36567008
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| | |||||| ||||||||  |||   |||||||||| ||||| || ||| |||||||||  ||||||||||| |||||||| |||||||||    
T  36567121 atacaaaacagacccctatgttttgcaactgtactagttttggcccccaaggccgattttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 36567022  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  36567021 acgtgtcatttttt 36567008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 12759702 - 12759642
Alignment:
Q  182 caattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||| ||||||| | || |||||||||||||||||| |||||||||||||||||||||||    
T  12759702 caattttgactcgatctaggctgacgtgacaccctaagtgaggtgccacatgttatttttt 12759642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 49787334 - 49787397
Alignment:
Q  146 aagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||||| |||||||||||||||||||||   ||||| ||||||||| ||||||||||||    
T  49787334 aagttttgcatctgtggcagttttggcctccaaagtcaattttgactcggtctacgctgacgtg 49787397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 4474150 - 4474220
Alignment:
Q  144 ctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    ||||||||||||| ||||||||||||| || | |||||||||| ||| ||||| ||||||||| |||||||    
T  4474150 ctaagttttgcatttgtggcagttttgacccctaagaccaattttgattcggtctacgctgacatgacacc 4474220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 2205774 - 2205662
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | ||| | ||| |  |||||||||  ||||||||||||||| |||| |||||||||    
T  2205774 atacaaaacagccccctatgttttgattctttggcagttttggacccca-gtccattgttgactcggtcaacgctgacgtgacactctaagtgaggtgcc 2205676  T
Q  229 acatgttatttttt 242  Q
    |||||| |||||||    
T  2205675 acatgtaatttttt 2205662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 38511903 - 38511790
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  38511903 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 38511804  T
Q  229 acatgttatttttt 242  Q
    || ||||| |||||    
T  38511803 acgtgttaattttt 38511790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 53532052 - 53531951
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||||||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  53532052 atacaaaaccgccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 53531953  T
Q  229 ac 230  Q
    ||    
T  53531952 ac 53531951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 22494555 - 22494663
Alignment:
Q  64 cttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggc 163  Q
    |||||||| | |||||||| |||||||||| ||||||| ||||||||||||| ||||         ||||||||||||| |||| |||||||| ||||||    
T  22494555 cttaatagcaattttaaccccctaaattttccaaagttacgattttgaccccctaagaaaaaaa-ctacaaaaccgccctctaaattttgcatttgtggc 22494653  T
Q  164 agttttggcc 173  Q
    | ||||||||    
T  22494654 aattttggcc 22494663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 14341045 - 14340907
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||||   |||          |||||||  | |||||||||||||||| |||||    
T  14341045 gcttaatagtagtttta-ccttctaactttttcaaagttgcgattttgaccatctaaaaaaaaaac-tacaaaatagtcccctaagttttgcatttgtgg 14340948  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgct 203  Q
    ||||||||||| ||||  | |||| ||||||||| ||||||    
T  14340947 cagttttggcccccaacgctaattttgactcggtctacgct 14340907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 25248756 - 25248858
Alignment:
Q  128 tatacaaaaccgccccctaagttttgcatatgtggcag-ttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||||||||| ||||||||||||| ||||| || |||||| | |||||| ||||| ||||||||| ||| | ||||||  | ||||| |||||||    
T  25248756 tatacaaaaccgccctctaagttttgcatctgtggtagtttttggtccccaagatcaattttgactcggtctacac-gacgtggtagcctaagtgaggtg 25248854  T
Q  227 ccac 230  Q
    ||||    
T  25248855 ccac 25248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 27857381 - 27857266
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||||| || ||||||  ||| |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  27857381 atacaaaacagccccttatgttttgattatttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 27857282  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  27857281 acgtgtcaatttttat 27857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 787166 - 787280
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  787166 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 787265  T
Q  229 acatgttatttttta 243  Q
    || ||| | ||||||    
T  787266 acgtgtcaattttta 787280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 50802660 - 50802766
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||||| ||| |||| |||||||| ||||||| |||| ||||         ||||||||  |||||||||||||||| ||||||    
T  50802660 gcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaaaa-ctacaaaactaccccctaagttttgcacatgtgg 50802758  T
Q  163 cagttttg 170  Q
    ||||||||    
T  50802759 cagttttg 50802766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 50873217 - 50873111
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||||| ||| |||| |||||||| ||||||| |||| ||||         ||||||||  |||||||||||||||| ||||||    
T  50873217 gcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaaaa-ctacaaaactaccccctaagttttgcacatgtgg 50873119  T
Q  163 cagttttg 170  Q
    ||||||||    
T  50873118 cagttttg 50873111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 3192840 - 3192949
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctc-caagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||| |||||||||||| ||  ||| | ||||| |||| | ||||  ||||| ||||||||| ||| || || || |||||||| |||||||||    
T  3192840 tacaaaaccgacccctaagtttttcaactgtagtagtttaggcccctcaaggtcaattttgactcggtctacactaacatggcaccctaagtgaggtgcc 3192939  T
Q  229 acatgttatt 238  Q
    ||||||||||    
T  3192940 acatgttatt 3192949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 9153723 - 9153622
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||||||||||||  ||||||||    
T  9153723 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagcgaggtgcc 9153624  T
Q  229 ac 230  Q
    ||    
T  9153623 ac 9153622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 10864182 - 10864287
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||| ||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  10864182 atacaaaacagccctctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 10864281  T
Q  229 acatgt 234  Q
    ||||||    
T  10864282 acatgt 10864287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 25902666 - 25902556
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||  ||||||| || ||||| ||| ||||||||||||||||| | || ||||         |||||||||||| | |||||||||||| |||||    
T  25902666 gcttaatatcagttttagccccctaactttctcaaagttgcgattttggctccctaagaaaaaaaactacaaaaccgcctcataagttttgcatttgtgg 25902567  T
Q  163 cagttttggcc 173  Q
    |||||||||||    
T  25902566 cagttttggcc 25902556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 27748311 - 27748412
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  27748311 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 27748410  T
Q  229 ac 230  Q
    ||    
T  27748411 ac 27748412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 31117687 - 31117788
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || | |||  |||||||||  ||||||||||| ||||||||||||||||||    
T  31117687 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtcaaatgttgactcggtcaacgctgacgtggcaccctaaatgaggtgcc 31117786  T
Q  229 ac 230  Q
    ||    
T  31117787 ac 31117788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 37182245 - 37182132
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  ||||| |||  |||||||||||||||||||| |||||||||    
T  37182245 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgacttggtcaacgctgacgtgacaccctaagtgaggtgcc 37182146  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  37182145 acgtgtcatttttt 37182132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 42230277 - 42230176
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||   ||||||||||||||||||| |||||||||    
T  42230277 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcagcgctgacgtgacaccctaagtgaggtgcc 42230178  T
Q  229 ac 230  Q
    ||    
T  42230177 ac 42230176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 35494128 - 35494208
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||  || | |||||||||||||| || ||||||||| |||||||||  |||||||||||    
T  35494128 atacaaaacagccccctatgtatttgatctttggcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 35494208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 36315918 - 36315998
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| |||| |||||||||||||| || ||| ||||| |||||||||  || ||||||||    
T  36315918 atacaaaactgccccctatgtattggatatttggcagttttggccccctagatcaattttgactcggtcaacactgacgtg 36315998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40989585 - 40989505
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||| ||| || ||||||||| |||||||||  |||||||||||    
T  40989585 atacaaaacagccccctatgtattggatctttggcagtttttgccccctagaccaattttgactcggtcaacgctgacgtg 40989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 46984949 - 46985033
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || | | ||||| |||||||||  |||||||||||||||    
T  46984949 atacaaaacagccccctatgtattggatttttggcagttttggccccctaaatcaattttgactcggtcaacgctgacgtgacac 46985033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 50764178 - 50764094
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| || | || ||||||||||| || | ||||||| |||||| ||| |||||||||||||||    
T  50764178 atacaaaacagccccctatgtattggatctttgacagttttggccccctaaaccaattttgactctgttaacgctgacgtgacac 50764094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 55094566 - 55094486
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||| ||| || ||||||||| |||||||||  |||||||||||    
T  55094566 atacaaaacagccccctatgtattggatctttggcagttttagccccctagaccaattttgactcggtcaacgctgacgtg 55094486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 28944105 - 28944152
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    ||||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  28944105 gccccctaagttttgcacatgtagcagttttggcccccaaggccaatt 28944152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 42686485 - 42686540
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaag 120  Q
    ||||||| |||||||||||||||| |||   |||||||||||||||||||| ||||    
T  42686485 ttaatagcagttttaacctcctaagtttcaaaaagttgcgattttgaccccctaag 42686540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 44436456 - 44436499
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  44436456 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 44436499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 44702113 - 44702050
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgact 192  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| |||||||||||| |||||    
T  44702113 atacaaaacagccccctatgtattggatctttggcagttttggcccccaagaccaattttgact 44702050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 51315562 - 51315605
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  51315562 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 51315605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 9630835 - 9630937
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  9630835 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 9630934  T
Q  229 aca 231  Q
    |||    
T  9630935 aca 9630937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 19391822 - 19391768
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| |||||||    
T  19391822 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcatttttt 19391768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 25782840 - 25782794
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||    
T  25782840 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgt 25782794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 2118780 - 2118885
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||   |||||||||| |||||||| |||||||||    
T  2118780 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccagtgttgactcggtcatcgctgacgtggcaccctaagtgaggtgcc 2118879  T
Q  229 acatgt 234  Q
    ||||||    
T  2118880 acatgt 2118885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 4474316 - 4474259
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaatt 186  Q
    ||||||||||||| ||||||||||||  ||| |||||||||| || ||||||||||||    
T  4474316 tacaaaaccgccctctaagttttgcaactgtagcagttttggccccccaagaccaatt 4474259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 5577000 - 5577101
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  5577000 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 5577099  T
Q  229 ac 230  Q
    ||    
T  5577100 ac 5577101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 28097670 - 28097569
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | | |||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  28097670 atacaaaacagccccctatgttttgattctttagcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 28097571  T
Q  229 ac 230  Q
    ||    
T  28097570 ac 28097569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 30200660 - 30200559
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  30200660 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 30200561  T
Q  229 ac 230  Q
    ||    
T  30200560 ac 30200559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 32459029 - 32458928
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||||| || ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  32459029 atacaaaacagccccatatgttttgattctttggcagttttggacccctagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 32458930  T
Q  229 ac 230  Q
    ||    
T  32458929 ac 32458928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 33621933 - 33622034
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | || ||||||||| | || || ||| |  |||||||||  ||||||||| |||||||||| |||||||||    
T  33621933 atacaaaacagccccctatgttttgattctttgacagttttggacccccagtccattgatgactcggtcaacgctgacgagacaccctaagtgaggtgcc 33622032  T
Q  229 ac 230  Q
    ||    
T  33622033 ac 33622034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 33933434 - 33933535
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||| ||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  33933434 atacaaaacagccctctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 33933533  T
Q  229 ac 230  Q
    ||    
T  33933534 ac 33933535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 33943685 - 33943734
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    |||||||||||||| || ||||||||| |||||||||  |||||||||||    
T  33943685 tggcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 33943734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 36017007 - 36016906
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| ||| |||||    
T  36017007 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgtcaccctaagtgaagtgcc 36016908  T
Q  229 ac 230  Q
    ||    
T  36016907 ac 36016906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 45760479 - 45760378
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | || ||||||||| | || || ||| |  ||||||| |  ||||||||||| ||||||||||||||||||    
T  45760479 atacaaaacagccccctatgttttgattctttgacagttttggacccccagtccattgttgactcgatcaacgctgacgtggcaccctaaatgaggtgcc 45760380  T
Q  229 ac 230  Q
    ||    
T  45760379 ac 45760378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 52917565 - 52917464
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||| ||||||| |||||||| |||||||||    
T  52917565 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgttgacgtggcaccctaagtgaggtgcc 52917466  T
Q  229 ac 230  Q
    ||    
T  52917465 ac 52917464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 55093249 - 55093302
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    |||||||||||||| || | ||||||| |||||||||  |||||||||||||||    
T  55093249 tggcagttttggccccctaaaccaattttgactcggtcaacgctgacgtgacac 55093302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 5154027 - 5153927
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | || ||||||||  | || |||||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  5154027 atacaaaacagccccctatgttttgattctttgacagttttgaacccccagaccagtgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 5153928  T
Q  229 a 229  Q
    |    
T  5153927 a 5153927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 12759576 - 12759623
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaa 178  Q
    |||||||||||||| |||||||||||  ||| |||||||||||||||||    
T  12759576 tacaaaaccgcccc-taagttttgcaactgtagcagttttggcctccaa 12759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 17256695 - 17256779
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| || | || |||||||| ||||  ||||||||| ||||||| |  |||||||||||||||    
T  17256695 atacaaaacagccccctatgtattggatctttgacagttttgacctcttagaccaattttgactcgatcaacgctgacgtgacac 17256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 38958091 - 38958051
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttg 170  Q
    ||||||||||||||||||||||||||  ||| |||||||||    
T  38958091 tacaaaaccgccccctaagttttgcaactgtagcagttttg 38958051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 51225053 - 51225133
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| ||||||||  | ||| || | |||||||||||||| || | ||||||| |||||||||  |||||||||||    
T  51225053 atacaaaacagccccctatttattggatctttggcagttttggccccctaaaccaattttgactcggtcaacgctgacgtg 51225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 53191087 - 53191143
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| | |||||||    
T  53191087 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcaatttttat 53191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 44617985 - 44617875
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||    
T  44617985 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtca 44617886  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  44617885 cctgttatttt 44617875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 244
Target Start/End: Original strand, 39918435 - 39918616
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||||||||| || ||||| ||| ||||||||||||||||| |||| ||||         | ||||| ||||| |||||||||||||||||||    
T  39918435 gcttaatagtagttttagccccctaactttctcaaagttgcgattttggccccctaagaaaaaaaactgcaaaatcgcccgctaagttttgcatatgtgg 39918534  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    | ||||||||| ||||| |||||| ||||||||| | |||||||||| |||||||| ||||||||||| |||||||||||||    
T  39918535 ctgttttggcccccaaggccaattttgactcggtcttcgctgacgtggcaccctaagtgaggtgccacgtgttattttttat 39918616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 34679098 - 34679273
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgcccc-ctaagttttgcatatgtg 161  Q
    ||||||||| ||||||| || ||||| |||| |||||||||||||||| || | ||||       | |||||||||||||| |||||||||||| |||||    
T  34679098 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaaaat-tacaaaaccgcccccctaagttttgcacatgtg 34679196  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||||||||||||||||||| |||| |||| |||| |||||||||||| |||||||| ||||||||||| |||||||    
T  34679197 gcagttttggcctccaagacaaattttgacccggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatt 34679273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 14489281 - 14489395
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||| |||||||| ||| |||||||  ||||||||||    
T  14489281 tacaaaaccgccccctaagttttgcacctgtggcagttttgacctccaagaccaattttgactcggtctacgctgatgtggcaccctacgtgaggtgcca 14489380  T
Q  230 catgttattttttat 244  Q
    | |||||||||||||    
T  14489381 cgtgttattttttat 14489395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 37431611 - 37431721
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||| ||||| |||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  37431611 tacaaaatcgcccactaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 37431710  T
Q  230 catgttatttt 240  Q
    |||||||||||    
T  37431711 catgttatttt 37431721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 34760915 - 34761027
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||| || ||||||||| |||||||| ||||||| ||    
T  34760915 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgacgtggtctatgctgacgtggcaccctaagtgaggtgtca 34761014  T
Q  230 catgttatttttt 242  Q
    |||||| ||||||    
T  34761015 catgttttttttt 34761027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 43028795 - 43028973
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| || | |||||||||||||||| |||| ||||         ||||||||| ||||||||||||||||| |||||    
T  43028795 gcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaacc-ccccctaagttttgcatctgtgg 43028893  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||||| | | |||||| ||||||||| |||||||||||| |||||||| ||||||||||  |||||||||||    
T  43028894 cagttttggcctctagggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccaagtgttatttttt 43028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 27489510 - 27489612
Alignment:
Q  140 ccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    |||||||| |||||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||||| || ||||| ||||||| ||| ||||||||    
T  27489510 ccccctaacttttgcatctgtggcagttttggcctccaagggcaattttgactcggtttacgctgacgtggcatcctaagtgaggtgacacgtgttattt 27489609  T
Q  240 ttt 242  Q
    |||    
T  27489610 ttt 27489612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 4925507 - 4925620
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| |||||||||||||||||||||||||||||| || | |||||||||| ||  || || |||||||||||| |||||||| | ||||||||    
T  4925507 tacaaaaccgtcccctaagttttgcatatgtggcagttttgacccctaagaccaattttggttctgtctacgctgacgtggcaccctaagtaaggtgcca 4925606  T
Q  230 catgttatttttta 243  Q
    | ||||||||||||    
T  4925607 cgtgttatttttta 4925620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 5470583 - 5470478
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||| ||| |||||||||||||||| ||||| |||||| ||||||||| || ||||||||| |||||||| ||||||||||    
T  5470583 tacaaaaccgccccttaagttttacatctgtggcagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagtgaggtgcca 5470484  T
Q  230 catgtt 235  Q
    | ||||    
T  5470483 cgtgtt 5470478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 6510068 - 6510179
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||  ||||| ||| ||| | || | ||||||| |||||||| ||||||||||    
T  6510068 tacaaaaccgccccctaatttttgcatatgtggcagttt-ggcctccaaggtcaattttgaatcgatctatgttgacgtggcaccctaagtgaggtgcca 6510166  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  6510167 catgttatttttt 6510179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 8857114 - 8857226
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||  |||||| ||||| |||  ||||||| ||| |||| ||||||||||||||    
T  8857114 tacaaaaccgcctcctaagttttgcatttgtggcagttttggcccccaatgccaattttgacttggtcaacgctgatgtggcaccttaaatgaggtgcca 8857213  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  8857214 cgtgttatttttt 8857226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 2609335 - 2609220
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||| |||||||| ||||||||||||||||| || |||||| ||||| ||||||||| |||||||| ||| |||||||| |||| |||||    
T  2609335 tacaaaatcgccccataagttttacatatgtggcagttttgacccccaagatcaattttgactcggtctacgctgatgtggcaccctaagtgagttgcca 2609236  T
Q  230 catg-ttattttttat 244  Q
    | || |||||||||||    
T  2609235 cgtgtttattttttat 2609220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 31827526 - 31827706
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||  ||||| |||| |||||||| ||||||| |||| ||||         ||||||| | ||||||||| ||||||| ||||     
T  31827526 gcttaatagcagttttaactccctaacttttccaaagttgtgattttgcccccctaagaaaaaagactacaaaatcaccccctaagctttgcatctgtgc 31827625  T
Q  163 cagttttggcctcc-aagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||| || || | ||||| ||| ||||| |||||||||||| |||||||| |||||||||||||||| ||||||    
T  31827626 cagttttggccccccaaaatcaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacatgttttttttt 31827706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 24472683 - 24472581
Alignment:
Q  140 ccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    ||||||||||||||||| |||||||||||||||| ||||  |||||| |||||| || ||| || ||||| |||||||| ||||||||||| ||||||||    
T  24472683 ccccctaagttttgcatctgtggcagttttggccgccaatgccaattttgactccgtctacactaacgtggcaccctaagtgaggtgccacgtgttattt 24472584  T
Q  240 ttt 242  Q
    |||    
T  24472583 ttt 24472581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 37803191 - 37803304
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||| |||||||||||||| ||||||||||||| || ||||   ||||| ||||||||| |||||||||||| |||||||| | ||||| ||    
T  37803191 tacaaaaccgcctcctaagttttgcatttgtggcagttttgacc-ccaatgtcaattttgactcggtctacgctgacgtggcaccctaagtaaggtgtca 37803289  T
Q  230 catgttattttttat 244  Q
    | |||||||||||||    
T  37803290 cgtgttattttttat 37803304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 5008531 - 5008422
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    ||||||| || ||||||||||||| ||||||| ||||||||  ||||  ||||| ||||||||| |||||||||||| |||||||| |||| ||||||||    
T  5008531 aaaaccgtcctctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgccacat 5008432  T
Q  233 gttatttttt 242  Q
    ||| ||||||    
T  5008431 gttttttttt 5008422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 14943791 - 14943686
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||| ||||| | |||| ||||||||| |||||||| ||| |||||||| ||||||||||    
T  14943791 tacaaaaccgccctctaagttttgcacctgtggcatttttggcccccaaggctaattttgactcggtctacgctgatgtggcaccctaagtgaggtgcca 14943692  T
Q  230 catgtt 235  Q
    | ||||    
T  14943691 cgtgtt 14943686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 25333569 - 25333666
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||||| ||||||||||||||||  |||||||||||||| ||||||| |||||| ||||| ||| |||||||||||| |||||||| | |||||||||    
T  25333569 aaaaccaccccctaagttttgcacctgtggcagttttggtctccaaggccaattttgacttggtctacgctgacgtggcaccctaagtaaggtgccac 25333666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 25411609 - 25411721
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| ||||||||||||  || |||| ||||||| ||||||||| || ||||||||| |||| ||| ||| ||||||    
T  25411609 tacaaaaccgccccctaagttttgcatctgtggcagttttcacccccaataccaattttgactcggtctatgctgacgtggcaccataagtgatgtgcca 25411708  T
Q  230 catgttatttttt 242  Q
      ||| |||||||    
T  25411709 ggtgtaatttttt 25411721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 32969625 - 32969713
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaa 218  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||  ||||| |||||| ||||||||| |||||||||||||| ||||||    
T  32969625 tacaaaatcgccccctaagtttttcatttgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtgacgccctaa 32969713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 35718713 - 35718825
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||||||  |||||||| |||||||||||||||||||||| |||||| |||||| || |||| ||| ||| |||||||| |||  |||||    
T  35718713 tacaaaaccgtcccctacattttgcatctgtggcagttttggcctccaaggccaattttgactcagtctacggtgatgtggcaccctaagtgatttgcca 35718812  T
Q  230 catgttatttttt 242  Q
    ||||| |||||||    
T  35718813 catgtaatttttt 35718825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 41196476 - 41196364
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| | ||| |||||||||||||||||| |||||| ||| ||||   |||||  |||| ||| |||||||||||| |||||||| ||||||||||    
T  41196476 tacaaaactgtcccttaagttttgcatatgtggaagtttttgcccccaatgtcaatttagacttggtctacgctgacgtggcaccctaagtgaggtgcca 41196377  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  41196376 catgttatttttt 41196364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 5362407 - 5362313
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaaga-ccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||||||| ||  ||||||||||||||||||||| | |||||| |||||| || ||||||||||||||| ||||| |||||||||||||||||||    
T  5362407 taagttttacaactgtggcagttttggcctccaaaagccaattttgactcagtctacgctgacgtgacatcctaagtgaggtgccacatgttatt 5362313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 6592725 - 6592905
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntat---acaaaaccgccccctaagttttgcatatg 159  Q
    ||||||||| ||||||| || ||||| |||| ||||||||||||||||||||| ||||       | |   ||||||| ||||| |||||||||||||||    
T  6592725 gcttaatagcagttttagccccctaacttttccaaagttgcgattttgaccccctaagaagatttttttttacaaaactgcccc-taagttttgcatatg 6592823  T
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttt 241  Q
    ||||||||||||||  |||  | |||| |||||| || ||||||||| |  |||||||| ||||||||||| |||| |||||    
T  6592824 tggcagttttggccctcaatgctaattttgactcagtctacgctgacattgcaccctaagtgaggtgccacgtgtttttttt 6592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 8553789 - 8553678
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| ||| || |||||||||||| ||||||||||||| |  ||||   ||||| ||||||||| || |||||||||||||||||| ||||||||||    
T  8553789 tacaaaatcgcaccttaagttttgcatttgtggcagttttgtctcccaaagtcaatt-tgactcggtctatgctgacgtgacaccctaagtgaggtgcca 8553691  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  8553690 cgtgttatttttt 8553678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 24306262 - 24306151
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    ||||||| ||| ||||||||||| ||||| ||||| ||||| |||||  ||||| ||||| | | |||||||| |||||||||||| ||||||| |||||    
T  24306262 aaaaccgtcccttaagttttgcacatgtgacagttctggcccccaaggtcaattttgacttgatctacgctgatgtgacaccctaagtgaggtgtcacat 24306163  T
Q  233 gttattttttat 244  Q
    |||||| |||||    
T  24306162 gttattatttat 24306151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 19399488 - 19399314
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||| ||||||| || ||||| ||||||||||||| |||||||  ||||||||        | |||||||||| ||  |||||||||||  | ||    
T  19399488 gcttaatagcagttttagccccctaactttttcaaagttgtgattttggtcccttaagtaaaaaaaactacaaaaccgtccattaagttttgcacctatg 19399389  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
     ||| ||||||||||||||   ||| ||||||||| |||||||||||| |||||||| |||||| |||| ||||||||    
T  19399388 tcagctttggcctccaaga---attttgactcggtctacgctgacgtggcaccctaagtgaggttccacgtgttattt 19399314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 15022906 - 15023018
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctcc-aagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||||||| ||| |||||||| |||||||||||||||| || ||| |||| | |||||| || ||||||||| || |||||||| |||||||||    
T  15022906 tacaaaaccgcccc-taaattttgcatttgtggcagttttggccccccaaggccaaatttgactcagtctacgctgacatggcaccctaattgaggtgcc 15023004  T
Q  229 acatgttatttttt 242  Q
    || |||| ||||||    
T  15023005 acgtgttttttttt 15023018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 19895845 - 19895748
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| |||||||||||||||| ||| ||||  |||||| ||| |||||||| ||||||||  |||||||| ||||||||||  |||||||||||    
T  19895845 taagttttacatatgtggcagttttagcccccaatgccaattttgattcggtttatgctgacgtagcaccctaagtgaggtgccatgtgttatttttt 19895748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 18969410 - 18969228
Alignment:
Q  64 cttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta----tacaaaaccgccccctaagttttgcatatg 159  Q
    |||||||||||||||| | || ||| ||| |||||||||||||||||||||  ||||        |    ||||||| || || |||| ||||| || ||    
T  18969410 cttaatagtagttttaccttcttaactttctcaaagttgcgattttgaccctctaagaagaaaaaaaaactacaaaatcgtcctctaaattttgtatttg 18969311  T
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||| |||||| || ||||| |||||| ||||| ||  |||||||||||||||| |||||||||||| ||| |||||||||||    
T  18969310 tggctgttttgacccccaaggccaattttgactaggcctacgctgacgtgacactctaaatgaggtgtcacgtgttatttttt 18969228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 16043268 - 16043203
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcgg 195  Q
    |||| |||||||||||| ||||||||| |||||||||||||||| ||||| |||||| ||||||||    
T  16043268 tacagaaccgccccctatgttttgcatctgtggcagttttggcccccaaggccaattttgactcgg 16043203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 32013293 - 32013194
Alignment:
Q  143 cctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||||| |||| ||||||||||||  ||||  ||||| |||||||||  | ||| ||||| |||||||||||| || |||| |||||||||||    
T  32013293 cctaagttttgcaaatgtagcagttttggccctcaaggtcaattttgactcggtcaaggcttacgtgtcaccctaaatgacgtaccacgtgttatttttt 32013194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 4576774 - 4576681
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||||||||| |  ||| ||||||||||| |||   |||||| ||||||||| ||||||| |||| |||||||| ||||||||||| |||||||    
T  4576774 taagttttgcgttcgtgacagttttggcccccactgccaattttgactcggtctacgctggcgtggcaccctaagtgaggtgccacgtgttatt 4576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 40493713 - 40493814
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| |||||| || | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  40493713 atacaaaacagccccctatgttttgaatctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 40493812  T
Q  229 ac 230  Q
    ||    
T  40493813 ac 40493814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 42445439 - 42445552
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | || ||||||||| | || || ||| |  ||||||||| |||||||||||| |||||||| |||||||||    
T  42445439 atacaaaacagccccctatgttttgattttttgtcagttttggacccccagtccattgttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 42445538  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  42445539 acgtgtcatttttt 42445552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 4576546 - 4576667
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||| ||||||| |||||||| |||||||||||||  |||||| |||| ||||         ||||||| || ||| |||||||||||  ||| |||    
T  4576546 ttaatagcagttttagcctcctaactttttcaaagttgtcattttggccccctaagaaaaaaaactacaaaatcgtcccataagttttgcaactgtagca 4576645  T
Q  165 gttttggcctccaagaccaatt 186  Q
    ||||||||| ||||||||||||    
T  4576646 gttttggcccccaagaccaatt 4576667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 21361902 - 21362003
Alignment:
Q  84 cctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagacca 183  Q
    ||||| ||| ||||||||||||||||| |||||||||         ||||||| | |||||||||||||||| ||||||||||||||||  ||||| |||    
T  21361902 cctaactttatcaaagttgcgattttggccccttaagaaaaaaaactacaaaaacaccccctaagttttgcacatgtggcagttttggctcccaaggcca 21362001  T
Q  184 at 185  Q
    ||    
T  21362002 at 21362003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 28719444 - 28719524
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || ||||||||| |||||||||  |||||||||||    
T  28719444 atacaaaacagccccctatgtattggatctttggcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 28719524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 35921113 - 35921029
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    |||||||||  ||||||| || ||| || | ||||||||||||||||| ||| ||||| |||||||||  |||||||||||||||    
T  35921113 atacaaaacaaccccctatgtattggatctttggcagttttggcctcctagatcaattttgactcggtcaacgctgacgtgacac 35921029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 25453 - 25508
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaat 185  Q
    ||||||||||||||||||||||||||  ||||||||||||| || ||||| |||||    
T  25453 tacaaaaccgccccctaagttttgcacctgtggcagttttgacccccaaggccaat 25508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 2937035 - 2936922
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| || ||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  2937035 atacaaaacagctccctatgttttgattttttggcagttttggacccccagtccattcttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 2936936  T
Q  229 acatgttatttttt 242  Q
    || ||||| |||||    
T  2936935 acgtgttaattttt 2936922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 19026063 - 19025962
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  19026063 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 19025964  T
Q  229 ac 230  Q
    ||    
T  19025963 ac 19025962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 36195774 - 36195713
Alignment:
Q  181 ccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||| ||||||||| |||||||||||| |||||||| ||||||||||  |||| ||||||    
T  36195774 ccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgttttttttt 36195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 36987659 - 36987558
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  ||| |||||||||||| | || || ||| |  |||||||||  || |||||||| |||||||| |||||||||    
T  36987659 atacaaaacagccccctatgttttgattatttggcagttttggacccccagtccattgttgactcggtcaacactgacgtggcaccctaagtgaggtgcc 36987560  T
Q  229 ac 230  Q
    ||    
T  36987559 ac 36987558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 5470395 - 5470451
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||| |||||||||||||||||  ||| |||||||||||| ||||| ||||||    
T  5470395 tacaaaactgccccctaagttttgcaattgtagcagttttggcccccaaggccaatt 5470451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 23686747 - 23686663
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| ||| |||| || ||| || | |||||||||||||| || ||| ||||| |||||||||  |||||||||||||||    
T  23686747 atacaaaacagccacctatgtattggatttttggcagttttggccccctagatcaattttgactcggtcaacgctgacgtgacac 23686663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 43741737 - 43741665
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    |||||| || |||||| | ||||||||||| || || ||||||||| |||||||||  |||||||||||||||    
T  43741737 cccctatgtattgcatctttggcagttttgaccccctagaccaattttgactcggtcaacgctgacgtgacac 43741665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 6510246 - 6510203
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  6510246 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 6510203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 31784497 - 31784382
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||| | |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  31784497 atacaaagcagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 31784398  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  31784397 acgtgtcaatttttat 31784382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 34679339 - 34679296
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  34679339 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 34679296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 40711513 - 40711470
Alignment:
Q  199 acgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||    
T  40711513 acgctgacgtgacaccctaagtgaggtgccacgtgtcatttttt 40711470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 7464126 - 7464080
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgt 234  Q
    |||||||||  | |||||||||||||||||| |||||||||||||||    
T  7464126 tgactcggtcaatgctgacgtgacaccctaagtgaggtgccacatgt 7464080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 14489458 - 14489404
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaa 184  Q
    ||||||| | ||||||||||||||||  |||||||||||||||| ||||| ||||    
T  14489458 tacaaaatcaccccctaagttttgcaactgtggcagttttggcccccaaggccaa 14489404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 21552787 - 21552686
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||||| | ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  21552787 atacaaaacagccccctatgttttgattctttggcagttttggacctcca-gtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 21552689  T
Q  228 cac 230  Q
    |||    
T  21552688 cac 21552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 32969771 - 32969717
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaa 184  Q
    ||||||||||||||||||||||||||   || |||||||||||| ||| ||||||    
T  32969771 tacaaaaccgccccctaagttttgcaacagtagcagttttggcccccatgaccaa 32969717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 11362807 - 11362706
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | || ||||||||| |||| |||||| |  |||||||||  | | ||||||| |||||||| |||||||||    
T  11362807 atacaaaacagccccctatgttttgattctttgacagttttggactcctagaccattgttgactcggtcaatgttgacgtggcaccctaagtgaggtgcc 11362708  T
Q  229 ac 230  Q
    ||    
T  11362707 ac 11362706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 14983364 - 14983417
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    |||||||||||||| || ||| ||||| |||||||||  |||||||||||||||    
T  14983364 tggcagttttggccccctagatcaattttgactcggtcaacgctgacgtgacac 14983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 16144843 - 16144790
Alignment:
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    |||||||||||||| ||  |||||||| |||||||||  |||||||||||||||    
T  16144843 tggcagttttggccccctggaccaattttgactcggtcaacgctgacgtgacac 16144790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 25375186 - 25375129
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaag 120  Q
    ||||||||| ||||||| || ||||| |||||||| |||||||||||| |||| ||||    
T  25375186 gcttaatagcagttttagccccctaattttttcaatgttgcgattttggccccctaag 25375129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 25888137 - 25888036
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| | |||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  25888137 atacaaaacagacccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 25888038  T
Q  229 ac 230  Q
    ||    
T  25888037 ac 25888036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 31827780 - 31827723
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||| | ||||||||||||||||  ||| |||||||||||| ||||| ||||||    
T  31827780 atacaaaatcaccccctaagttttgcaactgtagcagttttggcccccaaggccaatt 31827723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 34123308 - 34123409
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  | ||||||||| |||||||| |||||||||    
T  34123308 atacaaaacagccccctatgttttgattgtttggcagttttggacccccagtccattgttgactcggtcaatgctgacgtggcaccctaagtgaggtgcc 34123407  T
Q  229 ac 230  Q
    ||    
T  34123408 ac 34123409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 42274770 - 42274693
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgac 206  Q
    ||||||||| ||||| || || ||| || | |||||||||||||||||||| |||||| ||||| ||| | |||||||    
T  42274770 atacaaaacagccccatatgtattggatctttggcagttttggcctccaaggccaattttgacttggtcttcgctgac 42274693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 6592980 - 6592932
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaa 178  Q
    |||||||| |||||||||||||||||  ||| |||||||||||| ||||    
T  6592980 tacaaaactgccccctaagttttgcaactgtagcagttttggcccccaa 6592932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 19206336 - 19206284
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||||||| |||||| || ||||| ||||| ||||||||||| |||||||||    
T  19206336 tgactcggtctacgctaacatgacatcctaagtgaggtgccacgtgttatttt 19206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 19399182 - 19399230
Alignment:
Q  62 tgcttaatagtagttttaacctcctaaatttttcaaagttgcgattttg 110  Q
    |||||||||| | ||||| |||||||| ||| |||||||||||||||||    
T  19399182 tgcttaatagcaattttagcctcctaactttctcaaagttgcgattttg 19399230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 21633254 - 21633178
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctga 205  Q
    ||||||||| |||||||| || ||| || | || ||||||||||| || ||||||||| |||||||||  |||||||    
T  21633254 atacaaaacagccccctatgtattggatctttgccagttttggccccctagaccaattttgactcggtcaacgctga 21633178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 23048417 - 23048497
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    |||||||||  ||||||| || ||| || | |||||||||||||| || | ||||||| |||||||||  |||||||||||    
T  23048417 atacaaaacaaccccctatgtattggatctttggcagttttggccccctaaaccaattttgactcggtcaacgctgacgtg 23048497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 35180532 - 35180452
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| |||| ||| |||||||||||||||| ||| || |||||  || | ||||||||||    
T  35180532 atacaaaacagccccctatgtattggatatttggtagttttggcctccaaggccacttttgacttagtcttcgctgacgtg 35180452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 43891605 - 43891525
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| ||||||||  | ||| || | |||||||||||||| || ||| ||||| |||||||||  |||||||||||    
T  43891605 atacaaaacagccccctatttattggatctttggcagttttggccccctagatcaattttgactcggtcaacgctgacgtg 43891525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 18504311 - 18504432
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| || |||||||||||| |||||||| |||||| |||    
T  18504311 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctctaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggttcca 18504410  T
Q  230 catgttattttttatcaaaaat 251  Q
    | |||||||||||| |||||||    
T  18504411 cgtgttattttttaccaaaaat 18504432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 36580585 - 36580407
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||| || | |||         ||||||||||||||||||||||||||| |||||||    
T  36580585 ttaatagtagttttaaccctttaactttttcaaagttgcgattttgatccttcaagaaaaaagc-tacaaaaccgccccctaagttttgcatttgtggca 36580487  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||| ||||   ||||| ||||||||| |||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  36580486 gttttggcccccaaagtcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtcacgtgttaatttttat 36580407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 15107238 - 15107126
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||| ||||||||| ||| |||| ||| |||||||| ||||||||||    
T  15107238 tacaaaaccgctccctaagttttgcatttgtggcagttttggcctccaatgccaattttgactcggtctacactgatgtggcaccctaagtgaggtgcca 15107139  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  15107138 catgttatttttt 15107126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 28472391 - 28472567
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| |||| ||||||||||||||||||||| ||||       ||  ||||| |||||  |||||||||| |||||||    
T  28472391 gcttaatagcagttttagcc-cctaacttttccaaagttgcgattttgaccccctaagaaaaaacta--caaaatcgccctataagttttgcttatgtgg 28472487  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||| ||| |||||||||||| ||| ||||| |||| |||||||||||||| |||||||||||||||||| ||||||    
T  28472488 cagttttcgcccccaagaccaattttgattcggtctacgttgacgtgacaccctgaatgaggtgccacatgttttttttt 28472567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 28786001 - 28785880
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| ||||| |||||||||||| | ||||||||||| || ||||| | |||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  28786001 tacaaaactgccccataagttttgcatttatggcagttttgacccccaaggctaattttgactcggtctacgctgacgtgacaccctaagtgaggtgcca 28785902  T
Q  230 catgttattttttatcaaaaat 251  Q
    | |||||||||||| |||||||    
T  28785901 cgtgttattttttaccaaaaat 28785880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 36903331 - 36903441
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||||||    
T  36903331 tacaaaaccgcccc-taagttttccatctgtggcagttttggccctcaaggccaattttgactcggtctacgctgacatggcaccctaagtgaggtgcca 36903429  T
Q  230 catgttattttt 241  Q
    ||||||||||||    
T  36903430 catgttattttt 36903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 44312988 - 44312877
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| ||| |||||||||||||| |||| |||||||||| || |||||||||| ||||||||| || |||||| || |||||||| ||||||||||    
T  44312988 tacaaaactgcctcctaagttttgcatttgtgacagttttggcttc-aagaccaattttgactcggtctatgctgacatgtcaccctaagtgaggtgcca 44312890  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  44312889 catgttatttttt 44312877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 35250120 - 35250298
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||||||||| ||  |||| |||| ||||||||||||||||  ||||||||         || |||||||||| ||||||||||||| | ||     
T  35250120 gcttaatagtagttttagccctctaacttttccaaagttgcgattttggtcccttaagaaaaaaac-tataaaaccgccctctaagttttgcatctttga 35250218  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||| | ||||| |||||| ||||||||| ||| |||||||| |||| ||| ||||||||||| |||||||||||    
T  35250219 cagttttggaccccaaggccaattttgactcggtctacactgacgtggcaccttaagtgaggtgccacgtgttatttttt 35250298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 29834398 - 29834285
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||||||||||||||||||||  |||| || ||||  || |||||  |||||  ||||||||  |||||||||||||||||||| |||||||||    
T  29834398 atacaaaaccgccccctaagttttgcacctgtgacaattttctcccccaaggtcaatttagactcggtccacgctgacgtgacaccctaagtgaggtgcc 29834299  T
Q  229 acatgttatttttt 242  Q
    ||||||||||||||    
T  29834298 acatgttatttttt 29834285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 15029059 - 15029240
Alignment:
Q  63 gcttaatagtagttttaacct---cctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatg 159  Q
    ||||||||| ||||||||||    ||||| |||| ||||||||||||||||||||| |||          |||||||||||||||||||||||||| |||    
T  15029059 gcttaatagcagttttaaccaacccctaacttttccaaagttgcgattttgaccccctaataaaaaaaactacaaaaccgccccctaagttttgcacatg 15029158  T
Q  160 tggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||||| |||||  ||||| |||||| ||  | |||||||||||||| ||| |||  |||||| |||||||||||    
T  15029159 tggcagttttggcccccaaggtcaattttgactc-gtccatgctgacgtgacaccttaagtgaaatgccacgtgttatttttt 15029240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 18186763 - 18186588
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnnta-tacaaaaccgccccctaagttttgcatatgtggc 163  Q
    ||||||| ||||||| || ||||| |||| ||||||| ||||||||||||| ||||        | || ||||||| ||| |||||||||||| ||||||    
T  18186763 ttaatagcagttttagccccctaacttttccaaagttacgattttgaccccctaagaaaaaaaaactataaaaccgtcccttaagttttgcatctgtggc 18186664  T
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattt 239  Q
    |||||||| | ||||| |||||| |||||| || |||| ||||||| |||||||| |||||||||||  |||||||    
T  18186663 agttttggtccccaaggccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgccacgggttattt 18186588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 6726500 - 6726392
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| | |||||||||||||||| |||||||||||||| || |||||  ||||| |||||| ||||||||||||||| |||||||| ||||||||||    
T  6726500 tacaaaatcaccccctaagttttgcacatgtggcagttttgccc-ccaaggacaattttgactcagtttacgctgacgtggcaccctaagtgaggtgcca 6726402  T
Q  230 catgttattt 239  Q
    | || |||||    
T  6726401 cgtgatattt 6726392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 8073957 - 8074054
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||| ||||| | |||||||||| ||| |||| ||||||||||| |||| ||||||    
T  8073957 taagttttgcatatgtggcagttttggcccccaaggccaattttgattcggtcttcgctgacgtggcactctaagtgaggtgccacgtgttttttttt 8074054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 3381930 - 3382013
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||   |||| ||||||||| |||||||| ||||||||    
T  3381930 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc-ccaaggttaattttgactcggtgtacgctgatgtgacacc 3382013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 41243711 - 41243822
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||| |||||||||||| | | ||||| |||||| ||||||||| |||| ||||||| |||||||| ||||||| ||    
T  41243711 tacaaaaccgcccc-taagttttgcatttgtggcagtttttgtccccaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgtca 41243809  T
Q  230 catgttatttttt 242  Q
      |||||||||||    
T  41243810 tgtgttatttttt 41243822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 21505927 - 21505752
Alignment:
Q  66 taatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcag 165  Q
    |||||| |||||||  | ||||| ||||||||||||||||||||| |||| ||||         |||||||| |||||||| | ||||||||| ||||||    
T  21505927 taatagcagttttagtcccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaactgccccctatgctttgcatatatggcag 21505828  T
Q  166 ttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||  ||||| ||| || |||||| || |||| |||||||||||||||| ||||||| ||| |||||| ||||    
T  21505827 ttttggctcccaaggccattt-tgactcagtctacgttgacgtgacaccctaagtgaggtgtcacgtgttatatttt 21505752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 47909761 - 47909887
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtga-----caccctaaatgagg 224  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||| | ||||  ||||| ||||||||| ||||||||| |||      |||||||||||||    
T  47909761 tacaaaatcgccccctaagttttgcatctgtggcaattttggctttcaaggtcaattttgactcggtctacgctgacatgataccctaccctaaatgagg 47909860  T
Q  225 tgccacatgttattttttatcaaaaat 251  Q
    | |||| |||||||||||| |||||||    
T  47909861 taccacgtgttattttttaccaaaaat 47909887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 4049776 - 4049889
Alignment:
Q  130 tacaaaaccgccccctaagt-tttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||||  |||||||| ||||||| ||||||||||||| ||  |||| |||||| ||||||| | |||||||||||| |||||||| |||||||||    
T  4049776 tacaaaaccgttccctaagtctttgcatctgtggcagttttgaccctcaaggccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgcc 4049875  T
Q  229 acatgttatttttt 242  Q
    || |||| ||||||    
T  4049876 acgtgttttttttt 4049889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 15348029 - 15348124
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgtta 236  Q
    |||||||||||||||| ||||| |||| ||||| |||||  ||||| ||||||||| |||||||| ||| |||||||| |||||| ||||||||||    
T  15348029 cccctaagttttgcatctgtggaagttatggcccccaaggtcaattttgactcggtctacgctgatgtggcaccctaagtgaggttccacatgtta 15348124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 28350184 - 28350259
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctga 205  Q
    |||||||||||||||||||||||||   |||||||||||||||| |||||||||||| ||||||| | ||||||||    
T  28350184 tacaaaaccgccccctaagttttgcccctgtggcagttttggcccccaagaccaattttgactcgatctacgctga 28350259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 17876237 - 17876317
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtga 210  Q
    |||||||| ||||||||| |||||||| |||||| ||||||||||||||| |||||| ||||||| | || ||||||||||    
T  17876237 tacaaaactgccccctaaattttgcatctgtggcggttttggcctccaaggccaattttgactcgatctatgctgacgtga 17876317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 20184985 - 20185096
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||| | ||||||||||||||||| ||||||||||| |||||  ||||| ||||||||| |||||||| ||  || ||||| ||||||| |     
T  20184985 tacaaaaccgcctcttaagttttgcatatgtgccagttttggcccccaaggtcaattttgactcggtctacgctgatgtagca-cctaagtgaggtgtcg 20185083  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  20185084 cgtgttatttttt 20185096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 23826087 - 23826175
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaa 218  Q
    ||||||| ||| || ||| |||||||| |||||||||||||||| |||||| ||||| ||| ||||| |||||||||||||| ||||||    
T  23826087 tacaaaatcgctccttaaattttgcatttgtggcagttttggcccccaagatcaattttgattcggtctacgctgacgtgacgccctaa 23826175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 5172588 - 5172691
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||| ||||||||||||| |||||||||||| ||  |||| ||||||| ||||||||| |||| |||| |  |||||||| ||||||||||  |||||||    
T  5172588 gccctctaagttttgcatctgtggcagttttagctcccaaaaccaattatgactcggtctacgttgacattgcaccctaagtgaggtgccatgtgttatt 5172687  T
Q  239 tttt 242  Q
    ||||    
T  5172688 tttt 5172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 14247613 - 14247439
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| || ||||| |||| |||||||||||||| ||||||||||          |||||||||| || |||||||||||| ||||||    
T  14247613 gcttaatagcagttttatcc-cctaacttttccaaagttgcgatttcgaccccttaaaaaaac----tacaaaaccgtccgctaagttttgcacatgtgg 14247519  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||| |||||  |||||| | ||||| | |||||||| ||| ||||||||  ||||||   | |||||||||||    
T  14247518 cagttttggcatccaaagccaattttaactcgatctacgctgatgtggcaccctaagggaggtgttgcgtgttatttttt 14247439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 25987169 - 25987056
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | ||||| ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  25987169 atacaaaacagccccctatgttttgattctttggcagttttggaccccaagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 25987070  T
Q  229 acatgttatttttt 242  Q
    || |||| ||||||    
T  25987069 acgtgttttttttt 25987056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 23745968 - 23746070
Alignment:
Q  138 cgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttat 237  Q
    ||||||| ||||||||||| |||| |||| |||||| ||||| ||| || ||||||||| ||||||||||||  ||| ||| ||||||| ||||||||||    
T  23745968 cgcccccaaagttttgcatttgtgacagtgttggcc-ccaaggccactt-tgactcggtctacgctgacgtggtaccgtaagtgaggtgtcacatgttat 23746065  T
Q  238 ttttt 242  Q
    |||||    
T  23746066 ttttt 23746070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 28350389 - 28350307
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    |||||||||||||| |||||||||||  |||||||||||||||| ||||| |||||| |||||| || |||||| ||||||||||    
T  28350389 tacaaaaccgcccc-taagttttgcacctgtggcagttttggcc-ccaaggccaattttgactctgtctacgctaacgtgacacc 28350307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 19644885 - 19644972
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    |||||||| ||  ||| ||||||||||||||||||||||||| | || | || |||||||||||| |||| ||| |||||||||||||    
T  19644885 taagttttacaactgtagcagttttggcctccaagaccaattttaacccagtctacgctgacgtggcaccgtaagtgaggtgccacat 19644972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 497358 - 497245
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  ||| || ||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  497358 atacaaaacagccccctatgttttgattatttgacagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 497259  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  497258 acgtgtcatttttt 497245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 20505147 - 20505228
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaat 220  Q
    |||||||||||||||||| || | | ||||| | |||||||  ||||| ||||||||| |||||||||||| ||||||||||    
T  20505147 gccccctaagttttgcatctgcgacggttttagactccaaggtcaattttgactcggtctacgctgacgtggcaccctaaat 20505228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 35437273 - 35437378
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  35437273 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 35437372  T
Q  229 acatgt 234  Q
    ||||||    
T  35437373 acatgt 35437378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 38053213 - 38053318
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  38053213 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 38053312  T
Q  229 acatgt 234  Q
    ||||||    
T  38053313 acatgt 38053318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 17932039 - 17931878
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| |||||| | |||| |||||||||||||||| |||  |||         |||||||| ||||| |||| |||||||| ||||     
T  17932039 gcttaatagcagttttagcctcctcacttttccaaagttgcgattttggccctctaaaaaaa----atacaaaatcgccctctaaattttgcatctgtgt 17931944  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| | | || | ||||| |||||  || |||||||||||| |||||||| |||||||||    
T  17931943 cagttttggtcccaaatatcaattttgactttgtctacgctgacgtggcaccctaagtgaggtgcc 17931878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 40872393 - 40872353
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttg 170  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  40872393 tacaaaaccgtcccctaagttttgcatatgtggcagttttg 40872353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 25036279 - 25036174
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||  |||||||||||||||||||| ||||||||     
T  25036279 atacaaaacagccccctatgttttgattctttggcagttttgaacccctagtccagtgttgactcggtcaacgctgacgtgacaccctaagtgaggtgca 25036180  T
Q  229 acatgt 234  Q
    ||||||    
T  25036179 acatgt 25036174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 34288115 - 34288216
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  34288115 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 34288214  T
Q  229 ac 230  Q
    ||    
T  34288215 ac 34288216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 35121480 - 35121584
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  ||||| | ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  35121480 atacaaaacagccccctatgttttgattctttggcagttttgaactcca-gtccagtgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 35121578  T
Q  229 acatgt 234  Q
    ||||||    
T  35121579 acatgt 35121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 39976796 - 39976897
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  39976796 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 39976895  T
Q  229 ac 230  Q
    ||    
T  39976896 ac 39976897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 42256655 - 42256692
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttg 170  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42256655 aaaaccgccccctaagttttgcacatgtggcagttttg 42256692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 42997298 - 42997197
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  42997298 atacaaaacagccccctacgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 42997199  T
Q  229 ac 230  Q
    ||    
T  42997198 ac 42997197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 930775 - 930890
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||||| | ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  930775 atacaaaacagccccctatgttttgattctttggcagttttggacctcca-gtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 930873  T
Q  228 cacatgttattttttat 244  Q
    ||| ||| | |||||||    
T  930874 cacgtgtcaatttttat 930890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 3318384 - 3318460
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgac 206  Q
    |||||||||| ||| |||||||||||  |||| || ||||| ||||||| ||||||| ||||||||| |||| ||||    
T  3318384 tacaaaaccgtcccttaagttttgcacctgtgacatttttgacctccaaaaccaattttgactcggtctacgttgac 3318460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 11374213 - 11374130
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    ||||||||  ||||||||||||||||| ||||  |||||||| | ||||| |||||| |||| |||| |||||||||||| ||||    
T  11374213 tacaaaactaccccctaagttttgcatttgtgctagttttgg-cgccaaggccaattttgacccggtctacgctgacgtggcacc 11374130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 15348203 - 15348147
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    ||||||||||||||||||||||||||   || |||||||||||| ||||| ||||||    
T  15348203 tacaaaaccgccccctaagttttgcaaccgtagcagttttggcccccaaggccaatt 15348147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 30503774 - 30503858
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || | ||||||| ||||||| |  |||||||||||||||    
T  30503774 atacaaaacagccccctatgtattggatctttggcagttttggccccctaaaccaattttgactcgatcaacgctgacgtgacac 30503858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 36580341 - 36580397
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||||| |||||||||||||||  ||| |||||||||||| ||||| ||||||    
T  36580341 tacaaaaccgtcccctaagttttgcaactgtagcagttttggccaccaaggccaatt 36580397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 40872354 - 40872298
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||| |||||||||||| |||||||| |||||| | || |||||||||||||    
T  40872354 tgactcggtctacgctgacgtggcaccctaagtgaggtactacgtgttattttttat 40872298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 42437963 - 42437879
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| || | || ||||||||||| || ||||||||| |||||||||  |||||||| ||||||    
T  42437963 atacaaaacagccccctatgtattggatctttgacagttttggccccctagaccaattttgactcggtcaacgctgacatgacac 42437879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 3319179 - 3319222
Alignment:
Q  199 acgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||    
T  3319179 acgctgacgtggcaccctaagtgaggtgccacgtgttatttttt 3319222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 7974456 - 7974571
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || ||  || |  |||||||||  ||||||||||| |||||||| |||||||||    
T  7974456 atacaaaacagccccctatgttttgattctttggcagttttggacccccagttcattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 7974555  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  7974556 acgtgtcaatttttat 7974571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 10097750 - 10097687
Alignment:
Q  181 ccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||| |||| |||| |||| ||||||| |||| ||||||||||| ||| |||||||||||||    
T  10097750 ccaattttgacccggtctacgttgacgtggcaccataaatgaggtgtcacgtgttattttttat 10097687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 14247361 - 14247404
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    |||||||||||||| |||||||||||  ||||||||||||||||    
T  14247361 tacaaaaccgccccataagttttgcaattgtggcagttttggcc 14247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 36903580 - 36903533
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttg 110  Q
    ||||||||| |||||||||| ||||| |||||||| ||||||||||||    
T  36903580 gcttaatagcagttttaaccccctaactttttcaatgttgcgattttg 36903533  T

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Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 7195523 - 7195624
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||||| | ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  7195523 atacaaaacagccccctatgttttgattctttggcagttttggacctcca-gtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 7195621  T
Q  228 cac 230  Q
    |||    
T  7195622 cac 7195624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 9500147 - 9500085
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgact 192  Q
    ||||||||||||||||||||||||    ||||| |||||||||| ||||| |||||| |||||    
T  9500147 tacaaaaccgccccctaagttttgaccttgtggtagttttggcccccaaggccaattttgact 9500085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 10312473 - 10312379
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgag 223  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| ||||    
T  10312473 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgag 10312379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 23740452 - 23740398
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| |||||||    
T  23740452 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcatttttt 23740398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 45717980 - 45718046
Alignment:
Q  144 ctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtga 210  Q
    ||||||||||||| |||| |||||||| || | |||| ||||| ||||||||| |||| ||||||||    
T  45717980 ctaagttttgcatctgtgtcagttttgacccctaagatcaattttgactcggtctacgttgacgtga 45718046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 5172770 - 5172729
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttgg 171  Q
    ||||||||||||||||||||||||||  ||| ||||||||||    
T  5172770 tacaaaaccgccccctaagttttgcaactgtagcagttttgg 5172729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 9035608 - 9035507
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||| ||||||| |||||||| |||||||||    
T  9035608 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgatgacgtggcaccctaagtgaggtgcc 9035509  T
Q  229 ac 230  Q
    ||    
T  9035508 ac 9035507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 18295919 - 18296020
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  18295919 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 18296018  T
Q  229 ac 230  Q
    ||    
T  18296019 ac 18296020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 20387796 - 20387691
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||| ||||||| ||| |||| |||||||||    
T  20387796 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgatgacgtggcactctaagtgaggtgcc 20387697  T
Q  229 acatgt 234  Q
    ||||||    
T  20387696 acatgt 20387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 20392270 - 20392165
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||| ||||||| ||| |||| |||||||||    
T  20392270 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgatgacgtggcactctaagtgaggtgcc 20392171  T
Q  229 acatgt 234  Q
    ||||||    
T  20392170 acatgt 20392165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 47731769 - 47731870
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||| |||| ||||||  ||| |||||||||||  | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  47731769 atacaaaacagcctcctatgttttgattatttggcagttttgaacccctagtccagtgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 47731868  T
Q  229 ac 230  Q
    ||    
T  47731869 ac 47731870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 16879373 - 16879420
Alignment:
Q  199 acgctgacgtgacaccctaaatgaggtgccacatgt--tattttttat 244  Q
    |||||||||||||||||||| ||||||||||| |||  ||||||||||    
T  16879373 acgctgacgtgacaccctaagtgaggtgccacgtgtcatattttttat 16879420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 42436955 - 42437035
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||  || | ||||||| |||||||||  |||||||||||    
T  42436955 atacaaaacagccccctatgtattggatctttggcagttttggctccctaaaccaattttgactcggtcaacgctgacgtg 42437035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 44434286 - 44434338
Alignment:
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccc 215  Q
    ||||||||||||||||||||| || |||||  || | ||||||||||||||||    
T  44434286 cagttttggcctccaagaccacttttgacttagtcttcgctgacgtgacaccc 44434338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 9479 - 9593
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||| || |||||||||||| | ||||||||||||||    
T  9479 tacaaaaccgtcccctaagttttgcatatgtggcagttttagcccccaaggccaattttgactcggtctaggctgacgtgacatcttaaatgaggtgcca 9578  T
Q  230 catgttattttttat 244  Q
    | |||||||||||||    
T  9579 cgtgttattttttat 9593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 21486722 - 21486836
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||| ||||||| ||    
T  21486722 tacaaaaccgccccctaagttttgcacctgtggcatttttggcctccaagatcaattttgacttggtctacgctgacgtgacaccctaagtgaggtgtca 21486821  T
Q  230 catgttattttttat 244  Q
    | | |||||||||||    
T  21486822 cgtattattttttat 21486836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 41487456 - 41487346
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||  ||| || ||||||||| |||||||||||| ||||||||| |||||||||||||||| |||| ||||||||||    
T  41487456 tacaaaaccgccccctaagttttgcaactgtagctgttttggcccccaagaccaattttgactcggtctacgctgacgtgacacgctaagtgaggtgcca 41487357  T
Q  230 catgttatttt 240  Q
     ||||||||||    
T  41487356 tatgttatttt 41487346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 3676374 - 3676262
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||| ||||||||||||| |||||||||||||| | |||| ||||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  3676374 tacaaaaccgcccactaagttttgcatctgtggcagttttggtccccaaaaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 3676275  T
Q  230 catgttatttttt 242  Q
      |||||||||||    
T  3676274 tgtgttatttttt 3676262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 37939917 - 37940063
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||| ||||||| |||| ||| ||||||||||||||||||||| ||||||||          ||||||||| |||||||||||||||||||||||||    
T  37939917 ttaatagcagttttagcctcttaattttttcaaagttgcgattttggccccttaaaaaaaac---tacaaaaccaccccctaagttttgcatatgtggca 37940013  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccc 215  Q
    ||||||| | |||||||||||| ||||||||| |||||||||||| |||||    
T  37940014 gttttgg-caccaagaccaattttgactcggtctacgctgacgtggcaccc 37940063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 45177202 - 45177380
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| || |||| |||||||| ||| |||||||||||||||||| ||| ||||         ||||||| || |||||||||||||||| ||||     
T  45177202 gcttaatagcagatttagcctcctaactttctcaaagttgcgattttgatcccctaagaaaaaaaactacaaaatcgtcccctaagttttgcatctgtga 45177301  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttt 241  Q
    |||||||||||  |||| | |||| ||||||||| ||| |||||||| |||||||| ||||||| ||||||||||||||    
T  45177302 cagttttggccctcaaggctaattttgactcggtctacactgacgtggcaccctaagtgaggtgtcacatgttattttt 45177380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 29044793 - 29044681
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| | ||| |||||||||||| |||||||||||||||| ||||| |||||| ||||||||| ||||||||||||  ||||||||||||||||||    
T  29044793 tacaaaactgtcccataagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggtaccctaaatgaggtgcca 29044694  T
Q  230 catgttatttttt 242  Q
    |  ||||||||||    
T  29044693 cgcgttatttttt 29044681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 37813337 - 37813249
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaa 218  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||| |||||||||||| ||||||||    
T  37813337 tacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaa 37813249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 25144024 - 25144122
Alignment:
Q  144 ctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||||||||||| ||||||||||||||| |||||  |||||| |||||||||||||||||||||  |||||||| ||| |||||||||||||||||||    
T  25144024 ctaagttttgcatctgtggcagttttggcatccaaagccaattttgactcggtttacgctgacgttgcaccctaagtgatgtgccacatgttatttttt 25144122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 29657771 - 29657893
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||| || ||||   ||||| ||| ||||| ||| ||||||||||||||||| |||||||||    
T  29657771 tacaaaaccgccccctaaattttgcatatgtggcagttttggccccccaaagtcaattttgattcggtctacactgacgtgacaccctaagtgaggtgcc 29657870  T
Q  229 acatgttattttttatcaaaaat 251  Q
    || |||| ||||||| |||||||    
T  29657871 acgtgtttttttttaccaaaaat 29657893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 20853444 - 20853556
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||| | | | |||| ||||||| ||||| |||||||||||||    
T  20853444 tacaaaaccaccccctaagttttgcatatgtggcagttttggcccccaagatcaattttgaatagatctacgttgacgtggcacccaaaatgaggtgcca 20853543  T
Q  230 catgttatttttt 242  Q
    | |||| ||||||    
T  20853544 cgtgttttttttt 20853556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 6807415 - 6807303
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||  ||||  ||||| |||||| || |||||||||||| |||||||| ||||||||||    
T  6807415 tacaaaaccaccccctaagttttgcatttgtggcagttttgtccctcaaggtcaattttgactctgtctacgctgacgtggcaccctaagtgaggtgcca 6807316  T
Q  230 catgttatttttt 242  Q
    | ||| |||||||    
T  6807315 cgtgtaatttttt 6807303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 16982856 - 16982745
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||| ||||| |||||| |||||  || |||||||||||| ||||| || ||||||||||    
T  16982856 tacaaaaccgccccctaagttttgcatctgtgccagtttt-gcccccaaggccaattttgacttagtctacgctgacgtggcaccccaagtgaggtgcca 16982758  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  16982757 cgtgttatttttt 16982745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 30539237 - 30539125
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||   ||||| ||| ||||| || ||||||||| |||||||| ||||||||||    
T  30539237 tacaaaaccgtcccctaagttttgcatctgtggcagttttggcccccaatgtcaattttgattcggtctatgctgacgtggcaccctaagtgaggtgcca 30539138  T
Q  230 catgttatttttt 242  Q
    | |||| ||||||    
T  30539137 cgtgttttttttt 30539125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 9762283 - 9762380
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||| | ||||||||||||||||||| | ||||| ||| || || |||||||||||| |||  |||||||||||||||||||||||||||    
T  9762283 taagttttgcatctttggcagttttggcctccaatatcaattttgattctgtctacgctgacgtggcacattaaatgaggtgccacatgttatttttt 9762380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 39890019 - 39889926
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgag 223  Q
    |||||| |||||| ||||||||||||| ||||||| |||||||||||||   ||||| |||||||||||||||||||||||||| |||| ||||    
T  39890019 tacaaatccgccctctaagttttgcatctgtggcaattttggcctccaatgtcaattttgactcggtttacgctgacgtgacactctaagtgag 39889926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 32071261 - 32071185
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgac 206  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||| ||||||||| |||||||||    
T  32071261 tacaaaaccgccccctaagttttgcatatatgacagttttggtctccaagaacaattttgactcggtctacgctgac 32071185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 44101535 - 44101424
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| | |||| |||||||||||| ||| |||||||||||| | | |||||||| |||||||||| |||||||||||||| ||||||||| ||||||    
T  44101535 tacaaaatcaccccttaagttttgcatctgtagcagttttggcc-caacgaccaattttgactcggttaacgctgacgtgacatcctaaatgaagtgcca 44101437  T
Q  230 catgttatttttt 242  Q
    | |||| ||||||    
T  44101436 cgtgttttttttt 44101424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 23702370 - 23702270
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    |||||||||||||||| |||| |||||||||||||||||  ||||| |||||| || || |||||| || |||||||| |||| |||||| |||||||||    
T  23702370 cccctaagttttgcatttgtgacagttttggcctccaaggtcaattttgactcagtctatgctgacatggcaccctaagtgagatgccacgtgttatttt 23702271  T
Q  241 t 241  Q
    |    
T  23702270 t 23702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 26823828 - 26823989
Alignment:
Q  64 cttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggc 163  Q
    |||||||| ||||||||||  |||| ||| |||||||| ||||||||||||||||||         ||||||| | ||||||||||||||||| ||||||    
T  26823828 cttaatagcagttttaaccctctaactttctcaaagttacgattttgaccccttaagaaaaaaaactacaaaatcaccccctaagttttgcatttgtggc 26823927  T
Q  164 agttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggt 225  Q
    |||||||| | ||||  |||||| ||| ||  | || | |||||||||||||||| ||||||    
T  26823928 agttttgggccccaatgccaattttgattcaatctaggttgacgtgacaccctaagtgaggt 26823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 22192609 - 22192432
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||| |||| ||||||| |||||||||||||  ||||||||||||||||       ||  |||||||| | |||||||||||||  ||| |    
T  22192609 gcttaatagcagtcttaatctcctaactttttcaaagttgtaattttgaccccttaagaaaaaacta--caaaaccgtctcctaagttttgcaactgtag 22192512  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    | ||||||||  |||||  ||||| ||||||||| |||||| | ||| |||||||| ||||||| ||| |||| ||||||    
T  22192511 ccgttttggctgccaaggtcaattttgactcggtctacgcttatgtggcaccctaagtgaggtgtcacgtgttttttttt 22192432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 29790834 - 29790940
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||| |||||||||||| ||||||||||||||| | || ||  ||||| ||||| ||| |||||||||||| |||||||  ||| ||| |||||||||||    
T  29790834 gccctctaagttttgcacatgtggcagttttggtccccgaggtcaattttgacttggtctacgctgacgtggcaccctatgtgaagtgtcacatgttatt 29790933  T
Q  239 ttttatc 245  Q
    |||||||    
T  29790934 ttttatc 29790940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 27545420 - 27545519
Alignment:
Q  142 ccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttt 241  Q
    ||||||||||||||| | |||||||||||||| | ||| |||||| | ||||| | |||||||||||| |||||||| ||||||||||| |||| |||||    
T  27545420 ccctaagttttgcatctatggcagttttggccccaaag-ccaattttaactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgttgttttt 27545518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 33298422 - 33298518
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttt 241  Q
    ||||||| |||| |||||||||||||||  ||||| | |||| ||| ||||| |||||||||||| |||||||| ||||||||||| ||| ||||||    
T  33298422 taagtttggcatctgtggcagttttggctcccaagtctaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtaattttt 33298518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 5734431 - 5734316
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  5734431 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 5734332  T
Q  229 acatgttattttttat 244  Q
    |||||| | |||||||    
T  5734331 acatgtcaatttttat 5734316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 14880414 - 14880514
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||||| |||||||| |||||||||||||||| ||||| || ||| ||||||||| || ||||||||| || ||||| |||  |||||| |||||||||    
T  14880414 cccctaaattttgcatctgtggcagttttggcccccaaggccgattttgactcggtctatgctgacgtggcatcctaagtga-ttgccacgtgttatttt 14880512  T
Q  241 tt 242  Q
    ||    
T  14880513 tt 14880514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 22846511 - 22846624
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| || ||| |||||||||||| | ||||||||||||||  ||||  ||||| ||| | ||| ||||||||| || |||||||| ||||||||||    
T  22846511 tacaaaatcgtcccataagttttgcatctttggcagttttggccctcaagggcaattttgaattggtctacgctgacatggcaccctaagtgaggtgcca 22846610  T
Q  230 catgttatttttta 243  Q
    | |||| |||||||    
T  22846611 cgtgttttttttta 22846624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 244
Target Start/End: Complemental strand, 44269430 - 44269256
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||| |||||||| ||||| ||| |||||||||||||||||||||| ||||       | |  ||||| |||   |||||||||||| |||||    
T  44269430 gcttaatagtaattttaaccccctaattttctcaaagttgcgattttgaccccctaagaaaaaacttt--aaaactgccttttaagttttgcatttgtgg 44269333  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
     |||||||||| ||||  |||||| |||||||   |||||||| ||| ||||||     ||||| |||||||||||||||||    
T  44269332 tagttttggcccccaatgccaattttgactcgacctacgctgatgtggcaccct-----aggtgtcacatgttattttttat 44269256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 521689 - 521591
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||  |||||||||||  ||| ||| |||||||||||||| || ||| ||||||||  |||||||||||| ||| ||||||||| |||||    
T  521689 tacaaaaccgccca-taagttttgcacttgtagcaattttggcctccaaggccgattttgactcggactacgctgacgtggcacgctaaatgagatgcca 521591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 30358910 - 30359025
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  ||| |||||  ||||||||||| ||||||||||||||||||    
T  30358910 atacaaaacagccccctatgttttgattctttggcagttttggacccctagtccattgttgattcggtcaacgctgacgtggcaccctaaatgaggtgcc 30359009  T
Q  229 acatgttattttttat 244  Q
    || ||| |||||||||    
T  30359010 acgtgtcattttttat 30359025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 37205787 - 37205672
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| |||||||||    
T  37205787 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcc 37205688  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  37205687 acgtgtcaatttttat 37205672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 7013596 - 7013491
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | |  || ||| |  |||||||||  ||||||||||| ||||||||||||||||||    
T  7013596 atacaaaacagccccctatgttttgattctttggcagttttggaccctcagtccattgttgactcggtcaacgctgacgtggcaccctaaatgaggtgcc 7013497  T
Q  229 acatgt 234  Q
    ||||||    
T  7013496 acatgt 7013491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 36688310 - 36688253
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaag 120  Q
    ||||||||| |||||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  36688310 gcttaatagcagttttaaccccctaactttttcaaagttgtgattttgaccccctaag 36688253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 8287791 - 8287735
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    |||||||||  |||||||||||||||||||| ||||||||||| ||| |||||||||    
T  8287791 tgactcggtcaacgctgacgtgacaccctaagtgaggtgccacgtgtcattttttat 8287735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 27300764 - 27300680
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||| |||||||| || ||| |||| |||||||||||||| ||||||||| || |||||  || | ||||||||||||||    
T  27300764 atacaaaacagccccctatgtattggatatttggcagttttggcccccaagaccacttttgacttagtcttcgctgacgtgacac 27300680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 45309568 - 45309488
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| |||| |||||||||||||| || ||||||||| ||||| |||  |||||||||||    
T  45309568 atacaaaacagccccctatgtattggatatttggcagttttggccccctagaccaattttgacttggtcaacgctgacgtg 45309488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 20095933 - 20095818
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  20095933 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 20095834  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  20095833 acgtgtcaatttttat 20095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 3411468 - 3411570
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaa-tgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||||||||||||| ||||||||    
T  3411468 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaaagtgaggtgc 3411567  T
Q  228 cac 230  Q
    |||    
T  3411568 cac 3411570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 15188175 - 15188070
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || ||  || |  |||||||||  ||||||||||| |||||||| |||||||||    
T  15188175 atacaaaacagccccctatgttttgattttttggcagttttggacccccagttcattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 15188076  T
Q  229 acatgt 234  Q
    ||||||    
T  15188075 acatgt 15188070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 16531495 - 16531394
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || |||||  |||||||||  ||||||||||| |||||||| |||||||||    
T  16531495 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccaatgatgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 16531396  T
Q  229 ac 230  Q
    ||    
T  16531395 ac 16531394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 17071090 - 17071041
Alignment:
Q  193 cggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||| |||||||||||| |||||||| ||||||||||| |||||||||||    
T  17071090 cggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttttt 17071041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 17577182 - 17577231
Alignment:
Q  193 cggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||| |||||||||||| |||||||| ||||||||||| |||||||||||    
T  17577182 cggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttttt 17577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 12278902 - 12278982
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | | |||||||||||| || ||||||||| |||||||||  |||||||||||    
T  12278902 atacaaaacagccccctatgtattggatttttcgcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 12278982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 35213223 - 35213163
Alignment:
Q  182 caattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||||| ||||||||  |||||||||||| |||| ||| ||||||||||| |||||||||||    
T  35213223 caattttgactcggcctacgctgacgtggcaccttaagtgaggtgccacgtgttatttttt 35213163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 5548137 - 5548074
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgact 192  Q
    ||||||||| ||||||||  | ||| |||| |||||||||||||||||||||||| || |||||    
T  5548137 atacaaaacagccccctatatattggatatttggcagttttggcctccaagaccacttttgact 5548074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 37953441 - 37953556
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  37953441 atacaaaacaaccccctatgttttgattttttggcagttttggaccccgagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 37953540  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  37953541 acgtgtcaatttttat 37953556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 41487268 - 41487311
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  41487268 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 41487311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 41574222 - 41574337
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  ||||||| |  |||||||||||||||| ||| |||||||||    
T  41574222 atacaaaacagccccctacgttttgattctttggcagttttggacccccagtccattgttgactcgatcaacgctgacgtgacaccataagtgaggtgcc 41574321  T
Q  229 acatgttattttttat 244  Q
    || ||| | |||||||    
T  41574322 acgtgtcaatttttat 41574337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 995181 - 995127
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| |||||||    
T  995181 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcatttttt 995127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 23936438 - 23936488
Alignment:
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacac 213  Q
    ||||||||||| || ||||||||| |||||||||  |||||||||||||||    
T  23936438 cagttttggccccctagaccaattttgactcggtcaacgctgacgtgacac 23936488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 25896993 - 25897043
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccc 115  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||||| ||||    
T  25896993 ttaatagcagttttagccccctaactttttcaaagttgcgattttggcccc 25897043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 36688215 - 36688153
Alignment:
Q  167 tttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||||||||| ||| | ||| |||||||||||| |||||||| |||| |||||    
T  36688215 tttggcccccaagaccaattttgatttggtctacgctgacgtggcaccctaagtgagatgcca 36688153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 41602550 - 41602616
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggt 196  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||| || |  |||||| |||||||||    
T  41602550 tacaaaaccacccgctaagttttgcccatgtggcagttttggccccctaagccaattttgactcggt 41602616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 4132821 - 4132926
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||  | || || ||| |  |||||||||  | ||||||||| |||||||| |||||||||    
T  4132821 atacaaaacagccccctatgttttgattctttggcagttttgaacccccagtccagtgttgactcggtcaatgctgacgtggcaccctaagtgaggtgcc 4132920  T
Q  229 acatgt 234  Q
    ||||||    
T  4132921 acatgt 4132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 4146852 - 4146953
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||| | |||||||| |||||||||    
T  4146852 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacggggcaccctaagtgaggtgcc 4146951  T
Q  229 ac 230  Q
    ||    
T  4146952 ac 4146953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 6745240 - 6745139
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| || ||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  6745240 atacaaaacagctccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 6745141  T
Q  229 ac 230  Q
    ||    
T  6745140 ac 6745139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 23234026 - 23233925
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| | |||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  23234026 atacaaaacagacccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 23233927  T
Q  229 ac 230  Q
    ||    
T  23233926 ac 23233925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 28349620 - 28349563
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaag 120  Q
    ||||||||||||||||| || ||||| |||  |||||||||||||||| |||| ||||    
T  28349620 gcttaatagtagttttagccccctaactttcccaaagttgcgattttggccccctaag 28349563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 30845621 - 30845726
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| || ||||| ||||||  | | |||||||||||| | || || ||| |  |||| ||||  ||||||||||| |||||||| |||||||||    
T  30845621 atacaaaacagctccctatgttttgattctttggcagttttggacccccagtccattgttgacccggtcaacgctgacgtggcaccctaagtgaggtgcc 30845720  T
Q  229 acatgt 234  Q
    ||||||    
T  30845721 acatgt 30845726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 36226661 - 36226548
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||| ||| || ||||| |||||||||    
T  36226661 atacaaaacagccccctatgttttgattctttggcagttttggacccctagtccattgttgactcggtcaacgctgaggtggcatcctaagtgaggtgcc 36226562  T
Q  229 acatgttatttttt 242  Q
    || ||| |||||||    
T  36226561 acgtgtcatttttt 36226548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 44886150 - 44886049
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  ||||| |||  ||||||||||| |||||||| |||||||||    
T  44886150 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgacttggtcaacgctgacgtggcaccctaagtgaggtgcc 44886051  T
Q  229 ac 230  Q
    ||    
T  44886050 ac 44886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 45106502 - 45106607
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  ||||| |||  ||||||||||| |||||||| |||||||||    
T  45106502 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgacttggtcaacgctgacgtggcaccctaagtgaggtgcc 45106601  T
Q  229 acatgt 234  Q
    ||||||    
T  45106602 acatgt 45106607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 15181719 - 15181786
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||||||||   | || |||||||||| ||||||||||||| ||||||||| ||| ||||||||    
T  15181719 cccctaagttttgctcctatgacagttttggcatccaagaccaattttgactcggtctac-ctgacgtg 15181786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 25897073 - 25897148
Alignment:
Q  166 ttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| |||||||||||| |||||| || |||||||||||| || ||||| |||| | |||| |||| ||||||    
T  25897073 ttttggcccccaagaccaattttgactc-gtctacgctgacgtggcatcctaagtgagttaccacgtgttttttttt 25897148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 30349416 - 30349530
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||| ||||| ||||||| || ||||| |||||| ||||||||| |||| ||||||| |||||||| ||||||||||    
T  30349416 tacaaaaccgccccttaagttttgcatctgtggtagttttgacccccaaggccaattatgactcggtctacgttgacgtggcaccctaagtgaggtgcca 30349515  T
Q  230 catgttattttttat 244  Q
    |||||||||||||||    
T  30349516 catgttattttttat 30349530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 6036906 - 6036799
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| | |||||||||||||||||||||||||||||| || ||||  |||||| ||||| |||||| |||||||||||||||||| ||||||||||    
T  6036906 tacaaaactgtcccctaagttttgcatatgtggcagttttgacccccaaagccaattttgacttggtttatgctgacgtgacaccctaagtgaggtgcca 6036807  T
Q  230 catgttat 237  Q
    ||||||||    
T  6036806 catgttat 6036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 10727504 - 10727328
Alignment:
Q  66 taatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcag 165  Q
    |||||| ||||||| || ||||| |||| |||||||| ||||||| |||| ||||         ||||||||||||||||||||||||||| ||||||||    
T  10727504 taatagcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcag 10727405  T
Q  166 ttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||| ||||| |||||| ||||| | | ||||||||||||  ||||||| |||| ||||||||||| ||||||    
T  10727404 ttttggcccccaaggccaattttgacttgatctacgctgacgtgggaccctaagtgagatgccacatgttttttttt 10727328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 32143326 - 32143435
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||| |||| ||| ||| ||| |||| ||||||| ||    
T  32143326 tacaaaaccgccccttaagttttgcacctgtggcagttttggcccccaagaccaattttgactcggtctacgttgatgtggcactctaagtgaggtggca 32143425  T
Q  230 catgttattt 239  Q
    ||||||||||    
T  32143426 catgttattt 32143435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 3812820 - 3812919
Alignment:
Q  142 ccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttt 241  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||| |||||||| |||||||| |  ||||||||||    
T  3812820 ccctaagttttgcatatgtggcagttttggcc-ccaagaccaattttgacccggtctacgctgacgtggcaccctaagtgaggtgctatgtgttattttt 3812918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 26311650 - 26311550
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||  ||||| ||||||||| |||||||||||| || ||||| ||||||||||    
T  26311650 tacaaaaccaccccttaagttttgcatatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcca 26311551  T
Q  230 c 230  Q
    |    
T  26311550 c 26311550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 266357 - 266248
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||  |||||||||||||||| |||| ||||||| ||| ||||| ||||||||||||||| ||||| ||||||| ||    
T  266357 tacaaaaccgccccttaagttttgcacctgtggcagttttggcc-ccaaaaccaattttgattcggtctacgctgacgtgacatcctaagtgaggtgtca 266259  T
Q  230 catgttatttt 240  Q
    | |||||||||    
T  266258 cgtgttatttt 266248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 209
Target Start/End: Complemental strand, 2853729 - 2853582
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgacccct-taagnnnnnnntatacaaaaccgccccctaagttttgcatatgtg 161  Q
    ||||||||| |||||||||||||||| ||| |||||||||| |||||| ||||  ||||         ||||||||||||||||||||||| ||||||||    
T  2853729 gcttaatagcagttttaacctcctaactttctcaaagttgcaattttggcccccctaagaaaaaaaactacaaaaccgccccctaagtttttcatatgtg 2853630  T
Q  162 gcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    |||||||||||| ||||| |||||| ||||||  | ||||||||||||    
T  2853629 gcagttttggcccccaaggccaattttgactcattctacgctgacgtg 2853582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 33399852 - 33399964
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||| | |||  ||||| ||||||||| |||||||||||| |||||||| ||| ||| ||    
T  33399852 tacaaaaccggaccctaagttttacatttgtggcagttttggcccctaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgatgtgtca 33399951  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  33399952 cgtgttatttttt 33399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 5003316 - 5003213
Alignment:
Q  139 gccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    |||||||||||||||||  |||||||||||||||  ||||   ||||| | ||| ||| ||||||||||||||||||||| ||||||| |||||||||||    
T  5003316 gccccctaagttttgcaattgtggcagttttggctcccaatgtcaattttaacttggtctacgctgacgtgacaccctaagtgaggtgtcacatgttatt 5003217  T
Q  239 tttt 242  Q
    ||||    
T  5003216 tttt 5003213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 17248637 - 17248816
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||||||| ||  ||||           ||||||||||| ||||||||||||| || |     
T  17248637 gcttaatagcagttttagcctcctaacttttttaaagttgcgattttgatcctctaagaaaaaaaacctcaaaaccgccctctaagttttgcatctgcga 17248736  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||||   |||||||||| ||| ||||| |||| ||||||| |||||||| |||||| || | |||||||||||    
T  17248737 cagttttggcccttaagaccaattttgattcggtctacgttgacgtggcaccctaagtgaggtaccccgtgttatttttt 17248816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 17532319 - 17532430
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||| |||||||||||  |||||||||||||||| | ||  ||| || ||||||||| |||| |||| || ||||| || ||||||||||    
T  17532319 tacaaaaccgccccttaagttttgcacctgtggcagttttggcccctaaagccagttttgactcggtctacgatgacatggcaccc-aagtgaggtgcca 17532417  T
Q  230 catgttatttttt 242  Q
    |||||||||||||    
T  17532418 catgttatttttt 17532430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 18031188 - 18031076
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||| ||| ||||||||| || ||||  ||||||||||  ||||| ||||| ||||| ||| |||||||||||| |||||||| ||||||| ||    
T  18031188 tacaaaaccgtcccttaagttttgtatttgtgatagttttggccctcaagatcaattttgacttggtctacgctgacgtggcaccctaagtgaggtgtca 18031089  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  18031088 cttgttatttttt 18031076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 20475014 - 20474851
Alignment:
Q  66 taatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcag 165  Q
    |||||| | ||||| || ||||| |||||||||||||||||||||| ||||||||         |||||||| |||||||||||||||||| ||||||||    
T  20475014 taatagcaattttagccccctaactttttcaaagttgcgattttgatcccttaagaaaaaaaactacaaaac-gccccctaagttttgcatctgtggcag 20474916  T
Q  166 ttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    |||||||| ||||   ||||  ||||||||| |||| ||||||| ||  |||  |||||||||||    
T  20474915 ttttggcccccaatgtcaatgttgactcggtatacgttgacgtggcagtctatgtgaggtgccac 20474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 1377275 - 1377387
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||||||| |||||||| |||||| |||||||||  |||| |  ||| ||||||||| || ||||| ||  |||||||| ||||||||||    
T  1377275 tacaaaatcgccccctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgcca 1377374  T
Q  230 catgttatttttt 242  Q
    ||||| |||||||    
T  1377375 catgtcatttttt 1377387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 1385023 - 1385135
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| |||||||||| |||||||| |||||| |||||||||  |||| |  ||| ||||||||| || ||||| ||  |||||||| ||||||||||    
T  1385023 tacaaaatcgccccctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgcca 1385122  T
Q  230 catgttatttttt 242  Q
    ||||| |||||||    
T  1385123 catgtcatttttt 1385135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 26601528 - 26601624
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||| ||||||||||||||||| |||| ||| ||||| | |||||||||||| ||||||||| |||||||| ||  |||||| | |||||||    
T  26601528 tacaaaaccaccccctaagttttgcatctgtgacagctttggtccccaagaccaattttgactcggtctacgctgatgtagcacccttagtgaggtg 26601624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 2841054 - 2840966
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaa 218  Q
    |||||||| | ||| |||||||||||| ||||||||||||||||  ||| ||||||| ||||||| | |||| ||||||| ||||||||    
T  2841054 tacaaaacagtcccataagttttgcatttgtggcagttttggcccgcaaaaccaattttgactcgctctacgttgacgtggcaccctaa 2840966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 11351719 - 11351803
Alignment:
Q  146 aagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    ||||||| ||||| |||||||||| | | ||||  |||||| ||||||||| |||||||||||| |||||||| |||||||||||    
T  11351719 aagttttacatatatggcagttttcgtccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccac 11351803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 6036723 - 6036768
Alignment:
Q  141 cccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6036723 cccctaagttttgcatatgtggcagttttggcccccaaggccaatt 6036768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 27771460 - 27771363
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtg 226  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||| || ||| || |||||||||  ||||||||||| |||||||| |||||||    
T  27771460 atacaaaacagccccctatgttttgattctttggcagttttggactcccagtccatttttgactcggtcaacgctgacgtggcaccctaagtgaggtg 27771363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 239181 - 239093
Alignment:
Q  140 ccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||| ||||||| |||  ||| |||||||||||  ||||| |||||| ||| ||||| |||||||||||| |||||||| |||||||||    
T  239181 ccccataagtttagcacctgttgcagttttggcacccaaggccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcc 239093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 7324722 - 7324837
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||| | | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  7324722 atacaaaacagccccctatgttttgattctttggcagttttagacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 7324821  T
Q  229 acatgttattttttat 244  Q
    || ||| |||||||||    
T  7324822 acgtgtcattttttat 7324837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 22517419 - 22517340
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    |||||||| |||||||| || ||| || | ||||||||||||||||| ||||||||| |||||||||  ||| |||||||    
T  22517419 tacaaaacagccccctatgtattggatctttggcagttttggcctcctagaccaattttgactcggtcaacgttgacgtg 22517340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 5606363 - 5606464
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  5606363 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 5606462  T
Q  229 ac 230  Q
    ||    
T  5606463 ac 5606464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 6261448 - 6261549
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  6261448 atacaaaactgccccctatgttttgattttttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 6261547  T
Q  229 ac 230  Q
    ||    
T  6261548 ac 6261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 7391723 - 7391622
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  7391723 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 7391624  T
Q  229 ac 230  Q
    ||    
T  7391623 ac 7391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 10977725 - 10977826
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||| ||||||| |||||||||||| |||||||||    
T  10977725 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggttaacgctgatgtgacaccctaagtgaggtgcc 10977824  T
Q  229 ac 230  Q
    ||    
T  10977825 ac 10977826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11614965 - 11615066
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| |||  || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  11614965 atacaaaacagccccctatgttttgattctttggcagttttggactctcagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 11615064  T
Q  229 ac 230  Q
    ||    
T  11615065 ac 11615066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 2017239 - 2017319
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || ||||||||| |||||| ||  |||||||||||    
T  2017239 atacaaaacagccccctatgtattggatctttggcagttttggccccctagaccaattttgactcagtcaacgctgacgtg 2017319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 11624295 - 11624215
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || ||| ||||| |||||||||  |||||||||||    
T  11624295 atacaaaacagccccctatgtattggatctttggcagttttggccccctagatcaattttgactcggtcaacgctgacgtg 11624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 12766461 - 12766405
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||||||||| |||||||||||  ||| |||||||||||| ||||| ||||||    
T  12766461 tacaaaaccgccccttaagttttgcaactgtagcagttttggcccccaaggccaatt 12766405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 2203289 - 2203339
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatt 238  Q
    ||||||||| |||||||||||| |||||||| | ||||||||||| |||||    
T  2203289 tgactcggtctacgctgacgtggcaccctaagtcaggtgccacatattatt 2203339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 4037450 - 4037364
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccc 215  Q
    ||||||||| |||||||| || ||| || | ||| ||||||||||  ||||||||||| ||||| |||   ||||||||||||||||    
T  4037450 atacaaaacagccccctatgtattggatctttggtagttttggccctcaagaccaattttgacttggtcgtcgctgacgtgacaccc 4037364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 16765167 - 16765221
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| ||| |||||||    
T  16765167 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcatttttt 16765221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 29874450 - 29874368
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgac 211  Q
    |||||||||  ||||||| || ||| || | |||||||||||||| || ||||||||| |||||||||  | |||||||||||    
T  29874450 atacaaaacaaccccctatgtattggatctttggcagttttggccccctagaccaattttgactcggtcaatgctgacgtgac 29874368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 1815222 - 1815121
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  ||||| |||  ||||||||||| |||||||| |||||||||    
T  1815222 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgctgacttggtcaacgctgacgtggcaccctaagtgaggtgcc 1815123  T
Q  229 ac 230  Q
    ||    
T  1815122 ac 1815121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 3579662 - 3579711
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaag 179  Q
    ||||||||||||||||||||||||||  ||| ||| |||||||| |||||    
T  3579662 tacaaaaccgccccctaagttttgcaactgtagcacttttggcccccaag 3579711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 4037105 - 4037170
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcg 194  Q
    |||||||||  ||||||| || ||| || | |||||||||||||| |||||||||||| |||||||    
T  4037105 atacaaaacaaccccctatgtattggatctttggcagttttggcccccaagaccaattttgactcg 4037170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 5605903 - 5605940
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttg 170  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  5605903 aaaaccgccccctaagttttacatttgtggcagttttg 5605940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 11322271 - 11322170
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| ||| |||| |||||||||    
T  11322271 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcactctaagtgaggtgcc 11322172  T
Q  229 ac 230  Q
    ||    
T  11322171 ac 11322170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 12256831 - 12256932
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||| ||  |||||||||||||||||||| |||||||||    
T  12256831 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcagtcaacgctgacgtgacaccctaagtgaggtgcc 12256930  T
Q  229 ac 230  Q
    ||    
T  12256931 ac 12256932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 21008992 - 21008891
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    |||||||||  ||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  ||||||||||| |||||||| |||||||||    
T  21008992 atacaaaacaaccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcc 21008893  T
Q  229 ac 230  Q
    ||    
T  21008892 ac 21008891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 30965758 - 30965859
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| ||||| |||||||||  | | | |||||||||| | || || ||| || |||||||||  | ||||||||| |||||||| |||||||||    
T  30965758 atacaaaacagccccttaagttttgattctttagcagttttggacccccagtccatttttgactcggtcaatgctgacgtggcaccctaagtgaggtgcc 30965857  T
Q  229 ac 230  Q
    ||    
T  30965858 ac 30965859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 2018444 - 2018364
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | || ||||||||| | || ||||||||| |||||||||  |||||||||||    
T  2018444 atacaaaacagccccctatgtattggatctttgtcagttttggtcccctagaccaattttgactcggtcaacgctgacgtg 2018364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 2840856 - 2840900
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||| |||||||||||||||  ||| ||||||||||||    
T  2840856 atacaaaaccgtcccctaagttttgcaattgtagcagttttggcc 2840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 2853495 - 2853551
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaatt 186  Q
    |||||||||| |||||||||||||||  ||| |||||||||| | ||||| ||||||    
T  2853495 tacaaaaccgtcccctaagttttgcaactgtagcagttttggtccccaaggccaatt 2853551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 11623286 - 11623366
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| ||||||||||| ||| || | | |||||||||| | || ||||||||| |||||||||  ||||| |||||    
T  11623286 atacaaaacagccccctaagtattggatctttagcagttttggtcccctagaccaattttgactcggtcaacgctaacgtg 11623366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 471 - 581
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||  |||||||| |||||||||||||||| ||    
T  471 tacaaaaccaccccctaagttttacatatgtggcagttttggcccccaagaccaattttgactcggtctatactgacgtggcaccctaaatgaggtgtca 570  T
Q  230 catgttatttt 240  Q
      |||||||||    
T  571 tgtgttatttt 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 76930 - 77041
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||| |||||||||||||||||||| ||||||||||||| || ||||| |||||| ||||||||| |||||||||||| |||||||| ||||||| ||    
T  76930 tacaaagccgccccctaagttttgcatttgtggcagttttgccc-ccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtca 77028  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  77029 cgtgttatttttt 77041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 77174 - 77117
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaag 120  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||| |||| ||||    
T  77174 gcttaatagtagttttaaccgcctaacttttttaaagttgcggttttggccccctaag 77117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 242
Target Start/End: Original strand, 145375 - 145533
Alignment:
Q  84 cctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagacca 183  Q
    ||||| ||| ||||||||||||||||| |||| ||||         |||||| ||||||| ||| |||||||| |||||||||||||||| ||||| |||    
T  145375 cctaactttctcaaagttgcgattttgcccccctaagaaaaaaaactacaaagccgccccttaaattttgcatctgtggcagttttggcccccaaggcca 145474  T
Q  184 attgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    ||| ||||||||| || |||||| ||  ||||||| ||||||||||| |||||||||||    
T  145475 attttgactcggtctaggctgacatggaaccctaagtgaggtgccacgtgttatttttt 145533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 240
Target Start/End: Original strand, 19915 - 20091
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||| |||||||||| ||||||||||| ||||||| ||||||| ||||| |||         ||||||| || || ||||||||||||| |||||    
T  19915 gcttaatagcagttttaaccccctaaattttttaaagttgtgattttggcccct-aagaaaaaaaactacaaaatcgtccactaagttttgcatctgtgg 20013  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttt 240  Q
    ||||||||||| ||||  |||||| ||||||| | |||||| ||||| |||||||| ||||||| ||| | |||||||    
T  20014 cagttttggcccccaaagccaattttgactcgatctacgctaacgtggcaccctaagtgaggtgtcacgttttatttt 20091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 25145 - 25034
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||||||||||||||||||| || |||||||||| |||| ||||||| ||||||| | | |||||||||| ||| |||| ||||||||||    
T  25145 tacaaaaccgccccctaagttttgcatatgcggtagttttggcc-ccaaaaccaattttgactcgatcttcgctgacgtggcactctaagtgaggtgcca 25047  T
Q  230 catgttatttttt 242  Q
      |||| ||||||    
T  25046 tgtgttttttttt 25034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 19275 - 19163
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||| || |||||| ||||||||| |  |||||||  |||||| |||    
T  19275 tacaaaaccgccccctaagttttgcacatgtggtagttttggcccccaaggccaattttggctcggtctacgctgacatagcaccctacgtgaggtacca 19176  T
Q  230 catgttatttttt 242  Q
    | |||| ||||||    
T  19175 cgtgttttttttt 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 210
Target Start/End: Complemental strand, 9847 - 9703
Alignment:
Q  65 ttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtggca 164  Q
    ||||||| |||||||||| |||||  |||| ||||||| |||||||||||| ||||         || |||| |||||||||| ||||||||  ||||||    
T  9847 ttaatagcagttttaaccccctaatatttttaaagttgtgattttgaccccctaagaaaaaaaactataaaatcgccccctaaattttgcatcggtggca 9748  T
Q  165 gttttggcctccaagaccaattgtgactcggtttacgctgacgtga 210  Q
    ||||||||| |||||||||||| ||||||| | |||||||||||||    
T  9747 gttttggcc-ccaagaccaattttgactcgttctacgctgacgtga 9703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 46321 - 46209
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| |||| ||||||||||||| |||| ||||||||||| |||||  ||||| |||||| || |||||||||||| |||||||| ||||  || |    
T  46321 tacaaaactgccctctaagttttgcatctgtgacagttttggcccccaaggtcaattttgactcagtctacgctgacgtggcaccctaagtgagacgcta 46222  T
Q  230 catgttatttttt 242  Q
    | |||||||||||    
T  46221 cgtgttatttttt 46209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 46144 - 46187
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcc 173  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  46144 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 46187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 3146 - 3245
Alignment:
Q  133 aaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacat 232  Q
    ||||||| || ||||||||||||| ||||||| ||||||||  ||||  ||||| ||||||||| |||||||||||| |||||||| |||| ||||||||    
T  3146 aaaaccgtcctctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgccacat 3245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 21659 - 21836
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgattttgaccccttaagnnnnnnntatacaaaaccgccccctaagttttgcatatgtgg 162  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||| || || |||         |||||||||| | | |||||||||| | | |||    
T  21659 gcttaatagtagttttagcctcctaacttttttaaagttgcgattttgtccact-aagaaaaaaaactacaaaaccgtctc-taagttttgcctctatgg 21756  T
Q  163 cagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||||||   |||| ||||||| ||||||||| |||||||||||| ||||| || |||| || ||| |||||||||||    
T  21757 cagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgttatttttt 21836  T

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Target: scaffold0417 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 9425 - 9517
Alignment:
Q  150 tttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttatttttt 242  Q
    |||||| |||||| |||||||||| |||||| ||||| ||||||||| |||||||||||| || ||||| ||||||| ||| ||||| |||||    
T  9425 tttgcacatgtggtagttttggcccccaagatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgtcacgtgttaattttt 9517  T

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Target: scaffold0372 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 191 - 302
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    ||||||| || | ||||| |||||||  |||||||||||||||| | ||| | |||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  191 tacaaaaacgtctcctaaattttgcacttgtggcagttttggccac-aaggcgaattttgactcggtctacactgacgtgacaccctaagtgaggtgcca 289  T
Q  230 catgttatttttt 242  Q
    | | |||||||||    
T  290 cgtattatttttt 302  T

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Target: scaffold0372; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 125 - 171
Alignment:
Q  63 gcttaatagtagttttaacctcctaaatttttcaaagttgcgatttt 109  Q
    ||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  125 gcttaatagcagttttagcctcctaactttctcaaagttgcgatttt 171  T

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Target: scaffold0809 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 2991 - 2907
Alignment:
Q  145 taagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgccac 230  Q
    ||||||||||||||||| ||||||||||| | ||| |||||| |||||| || |||  ||||||||||||||||||||| ||||||    
T  2991 taagttttgcatatgtgacagttttggccccaaag-ccaattttgactcagtctactttgacgtgacaccctaaatgagatgccac 2907  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 93889 - 93929
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttg 170  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  93889 tacaaaaccgtcccctaagttttgcatatgtggcagttttg 93929  T

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Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 93928 - 93984
Alignment:
Q  188 tgactcggtttacgctgacgtgacaccctaaatgaggtgccacatgttattttttat 244  Q
    ||||||||| |||||||||||| |||||||| |||||| | || |||||||||||||    
T  93928 tgactcggtctacgctgacgtggcaccctaagtgaggtactacgtgttattttttat 93984  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 199735 - 199815
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtg 209  Q
    ||||||||| |||||||| || ||| || | |||||||||||||| || ||||||||| |||||||||  |||||||||||    
T  199735 atacaaaacagccccctatgtattggatctttggcagttttggccccctagaccaattttgactcggtcaacgctgacgtg 199815  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 79058 - 79158
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcca 229  Q
    |||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  |||||||||  |||||||||||||||||||| ||||||||||    
T  79058 tacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgcca 79157  T
Q  230 c 230  Q
    |    
T  79158 c 79158  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 400771 - 400887
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttgg-cctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgc 227  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| || || || ||| |  |||||||||  ||||||||||| |||||||| ||||||||    
T  400771 atacaaaacagccccctatgttttgattctttggcagttttggaccccccagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgc 400870  T
Q  228 cacatgttattttttat 244  Q
    ||| ||| | |||||||    
T  400871 cacgtgtcaatttttat 400887  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 405132 - 405196
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactc 193  Q
    ||||||||| ||||||||| |||||   ||||||||||||||||| || || |||||| ||||||    
T  405132 atacaaaactgccccctaaattttgaccatgtggcagttttggccccccaggccaattttgactc 405196  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 63102 - 63188
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccc 215  Q
    |||||||||  ||||||| |||||| || | || ||||||||||| |||||| ||||| ||||| ||| | |||||||||| |||||    
T  63102 atacaaaacaaccccctatgttttggatctttgtcagttttggcccccaagatcaattttgacttggtcttcgctgacgtggcaccc 63188  T

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Target: scaffold0854 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 1970 - 2055
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacacc 214  Q
    ||||||||| |||||||| || ||| || | || |||||||| || || ||||||||| |||||||||  ||||||||||| ||||    
T  1970 atacaaaacagccccctaggtattggatctttgacagttttgaccccctagaccaattttgactcggtcaacgctgacgtggcacc 2055  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 1251 - 1352
Alignment:
Q  129 atacaaaaccgccccctaagttttgcatatgtggcagttttggcctccaagaccaattgtgactcggtttacgctgacgtgacaccctaaatgaggtgcc 228  Q
    ||||||||| |||||||| ||||||  | | |||||||||||| | || || ||| |  ||||| |||  ||||||||||| |||||||| |||||||||    
T  1251 atacaaaacagccccctatgttttgattctttggcagttttggacccccagtccattgttgacttggtcaacgctgacgtggcaccctaagtgaggtgcc 1350  T
Q  229 ac 230  Q
    ||    
T  1351 ac 1352  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 4260 - 4220
Alignment:
Q  130 tacaaaaccgccccctaagttttgcatatgtggcagttttg 170  Q
    ||||||||||||||||||||||||||  ||| |||||||||    
T  4260 tacaaaaccgccccctaagttttgcaactgtagcagttttg 4220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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