View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8676_low_3 (Length: 391)

Name: NF8676_low_3
Description: NF8676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8676_low_3
NF8676_low_3
[»] chr3 (49 HSPs)
chr3 (185-370)||(54017594-54017779)
chr3 (184-375)||(17731949-17732139)
chr3 (184-375)||(19033180-19033370)
chr3 (200-361)||(43978636-43978796)
chr3 (175-307)||(16870995-16871127)
chr3 (238-370)||(40195919-40196051)
chr3 (241-362)||(16869614-16869736)
chr3 (184-375)||(16143361-16143551)
chr3 (251-375)||(23162108-23162231)
chr3 (252-362)||(32200975-32201084)
chr3 (175-269)||(17735027-17735121)
chr3 (175-269)||(19036296-19036390)
chr3 (185-299)||(48127861-48127975)
chr3 (185-299)||(53595958-53596072)
chr3 (185-299)||(53596273-53596387)
chr3 (202-297)||(43755568-43755663)
chr3 (251-306)||(43978981-43979036)
chr3 (223-297)||(43481588-43481662)
chr3 (185-229)||(22304001-22304045)
chr3 (183-229)||(22303703-22303749)
chr3 (304-373)||(32201248-32201317)
chr3 (185-228)||(3135500-3135543)
chr3 (200-291)||(40196247-40196338)
chr3 (190-229)||(52634743-52634782)
chr3 (191-229)||(32589771-32589809)
chr3 (185-231)||(43346837-43346883)
chr3 (175-232)||(16868419-16868476)
chr3 (252-305)||(23161832-23161884)
chr3 (190-231)||(29644632-29644673)
chr3 (185-229)||(12114608-12114652)
chr3 (185-229)||(15772922-15772966)
chr3 (185-229)||(22304637-22304681)
chr3 (251-299)||(23162461-23162509)
chr3 (185-229)||(39389138-39389182)
chr3 (175-234)||(16869833-16869892)
chr3 (190-229)||(29644953-29644992)
chr3 (194-229)||(41359820-41359855)
chr3 (190-229)||(47964569-47964608)
chr3 (252-291)||(53981541-53981580)
chr3 (191-229)||(1634366-1634404)
chr3 (185-223)||(53118021-53118059)
chr3 (190-227)||(32462609-32462646)
chr3 (185-226)||(32462946-32462987)
chr3 (185-226)||(37990685-37990726)
chr3 (190-227)||(46546376-46546413)
chr3 (185-229)||(4823723-4823767)
chr3 (200-288)||(23161913-23162001)
chr3 (185-229)||(35946590-35946634)
chr3 (190-226)||(42342141-42342177)
[»] chr5 (37 HSPs)
chr5 (175-365)||(41341388-41341577)
chr5 (194-375)||(14168856-14169037)
chr5 (155-305)||(41340271-41340419)
chr5 (175-307)||(5963673-5963805)
chr5 (182-308)||(34103543-34103669)
chr5 (65-159)||(14169139-14169230)
chr5 (65-159)||(14169324-14169415)
chr5 (185-343)||(13042495-13042651)
chr5 (185-343)||(13112493-13112649)
chr5 (251-307)||(3294928-3294984)
chr5 (216-342)||(13042952-13043077)
chr5 (216-342)||(13112948-13113073)
chr5 (250-375)||(36389105-36389226)
chr5 (250-338)||(13042672-13042759)
chr5 (250-338)||(13112670-13112757)
chr5 (183-229)||(41170702-41170748)
chr5 (185-229)||(6500890-6500934)
chr5 (185-229)||(26074680-26074724)
chr5 (190-229)||(18603171-18603210)
chr5 (190-229)||(32487461-32487500)
chr5 (185-229)||(9498700-9498744)
chr5 (185-229)||(26074192-26074236)
chr5 (185-229)||(40296361-40296405)
chr5 (185-224)||(6500523-6500562)
chr5 (190-229)||(29549306-29549345)
chr5 (190-229)||(34753076-34753115)
chr5 (190-229)||(36521947-36521986)
chr5 (185-227)||(33747841-33747883)
chr5 (190-227)||(11417028-11417065)
chr5 (190-231)||(24489257-24489298)
chr5 (200-229)||(26075223-26075252)
chr5 (252-297)||(26420861-26420906)
chr5 (190-227)||(36527146-36527183)
chr5 (185-229)||(624264-624308)
chr5 (187-231)||(2411073-2411117)
chr5 (185-229)||(3295061-3295105)
chr5 (185-229)||(25328003-25328047)
[»] chr6 (31 HSPs)
chr6 (182-307)||(21130100-21130225)
chr6 (155-305)||(22605273-22605421)
chr6 (155-292)||(22605038-22605173)
chr6 (238-375)||(7301399-7301535)
chr6 (185-364)||(11637767-11637945)
chr6 (257-299)||(21297251-21297293)
chr6 (185-229)||(1846816-1846860)
chr6 (185-229)||(2377822-2377866)
chr6 (190-229)||(16454643-16454682)
chr6 (185-227)||(3058296-3058338)
chr6 (302-364)||(15092284-15092346)
chr6 (183-229)||(35210272-35210318)
chr6 (185-226)||(16107749-16107790)
chr6 (185-229)||(2578489-2578533)
chr6 (185-229)||(3409327-3409371)
chr6 (185-229)||(3415526-3415570)
chr6 (185-229)||(10074037-10074081)
chr6 (185-229)||(10074409-10074453)
chr6 (185-229)||(29518571-29518615)
chr6 (185-229)||(29518988-29519032)
chr6 (190-226)||(32460631-32460667)
chr6 (185-229)||(32741247-32741291)
chr6 (268-299)||(6250082-6250113)
chr6 (256-299)||(7301701-7301744)
chr6 (190-229)||(16454975-16455014)
chr6 (190-228)||(2843624-2843662)
chr6 (190-227)||(6071202-6071239)
chr6 (190-227)||(6999847-6999884)
chr6 (326-375)||(22605163-22605211)
chr6 (304-361)||(28940923-28940980)
chr6 (190-226)||(1127431-1127467)
[»] chr7 (41 HSPs)
chr7 (155-307)||(48071376-48071526)
chr7 (185-375)||(21416187-21416376)
chr7 (155-375)||(8802415-8802640)
chr7 (252-370)||(11776177-11776294)
chr7 (175-308)||(27391805-27391937)
chr7 (190-364)||(27597919-27598092)
chr7 (155-302)||(8802199-8802344)
chr7 (238-373)||(23578103-23578237)
chr7 (200-297)||(11776408-11776505)
chr7 (264-358)||(2463096-2463190)
chr7 (183-231)||(1085292-1085340)
chr7 (185-229)||(7517648-7517692)
chr7 (185-229)||(11845259-11845303)
chr7 (190-229)||(1085667-1085706)
chr7 (190-229)||(22566713-22566752)
chr7 (201-299)||(2463443-2463541)
chr7 (190-228)||(23569053-23569091)
chr7 (185-231)||(30253558-30253604)
chr7 (330-375)||(23568901-23568946)
chr7 (185-226)||(30244341-30244382)
chr7 (185-229)||(23423-23467)
chr7 (185-229)||(6054628-6054672)
chr7 (185-229)||(29157633-29157677)
chr7 (185-229)||(30245145-30245189)
chr7 (185-229)||(37533410-37533454)
chr7 (185-228)||(14681579-14681622)
chr7 (185-227)||(7554095-7554137)
chr7 (191-229)||(16569264-16569302)
chr7 (191-229)||(16596360-16596398)
chr7 (190-228)||(28300304-28300342)
chr7 (183-229)||(36939777-36939823)
chr7 (185-226)||(19122802-19122843)
chr7 (238-299)||(28445231-28445291)
chr7 (185-226)||(34218080-34218121)
chr7 (238-299)||(36675191-36675252)
chr7 (260-297)||(45100184-45100221)
chr7 (185-226)||(45754786-45754827)
chr7 (185-229)||(8128487-8128531)
chr7 (185-229)||(21619091-21619135)
chr7 (251-295)||(22561956-22562000)
chr7 (185-229)||(22567085-22567129)
[»] chr8 (34 HSPs)
chr8 (200-375)||(5981503-5981678)
chr8 (175-307)||(12156694-12156826)
chr8 (256-375)||(2954342-2954460)
chr8 (200-300)||(5981795-5981894)
chr8 (238-312)||(14028310-14028384)
chr8 (196-289)||(3671198-3671291)
chr8 (288-377)||(23753048-23753135)
chr8 (256-297)||(2954625-2954666)
chr8 (259-307)||(11576034-11576082)
chr8 (190-229)||(3038341-3038380)
chr8 (185-228)||(30441154-30441197)
chr8 (185-230)||(147887-147932)
chr8 (185-229)||(5915935-5915979)
chr8 (185-229)||(9483233-9483277)
chr8 (185-229)||(20870619-20870663)
chr8 (251-295)||(29103326-29103370)
chr8 (185-229)||(30359339-30359383)
chr8 (190-225)||(32640583-32640618)
chr8 (190-229)||(40518139-40518178)
chr8 (238-284)||(4840531-4840577)
chr8 (185-231)||(6651560-6651606)
chr8 (185-226)||(3669758-3669799)
chr8 (185-226)||(34834947-34834988)
chr8 (185-229)||(3670128-3670172)
chr8 (196-280)||(3670856-3670940)
chr8 (335-375)||(3671046-3671086)
chr8 (190-226)||(9507853-9507889)
chr8 (185-229)||(18371707-18371750)
chr8 (183-227)||(18372038-18372082)
chr8 (190-230)||(18829893-18829933)
chr8 (185-229)||(33113413-33113457)
chr8 (185-229)||(34835277-34835321)
chr8 (185-229)||(34835543-34835587)
chr8 (185-229)||(34835809-34835853)
[»] chr4 (45 HSPs)
chr4 (190-364)||(10396350-10396523)
chr4 (190-308)||(1868040-1868158)
chr4 (185-375)||(11197149-11197338)
chr4 (275-364)||(47680846-47680935)
chr4 (251-364)||(47681090-47681205)
chr4 (182-362)||(51681474-51681653)
chr4 (251-375)||(34946223-34946346)
chr4 (238-361)||(51681187-51681308)
chr4 (200-343)||(47680575-47680718)
chr4 (275-351)||(47680316-47680392)
chr4 (269-342)||(8445811-8445883)
chr4 (251-375)||(12717941-12718064)
chr4 (269-363)||(2917270-2917363)
chr4 (193-299)||(10396129-10396235)
chr4 (252-357)||(11307692-11307796)
chr4 (238-360)||(11307389-11307507)
chr4 (190-229)||(22183313-22183352)
chr4 (185-291)||(922424-922530)
chr4 (185-229)||(41370425-41370469)
chr4 (185-229)||(49302974-49303018)
chr4 (185-229)||(50630799-50630843)
chr4 (185-229)||(54936264-54936308)
chr4 (183-229)||(1731689-1731735)
chr4 (185-227)||(25483406-25483448)
chr4 (190-228)||(44620422-44620460)
chr4 (190-231)||(3271853-3271894)
chr4 (185-229)||(3340875-3340919)
chr4 (190-226)||(4955366-4955402)
chr4 (185-229)||(18932793-18932837)
chr4 (185-229)||(36629305-36629349)
chr4 (185-229)||(55933168-55933212)
chr4 (308-375)||(26473478-26473545)
chr4 (190-229)||(31691220-31691259)
chr4 (190-229)||(54017644-54017683)
chr4 (256-306)||(16559298-16559348)
chr4 (185-226)||(23817725-23817766)
chr4 (185-226)||(34646693-34646734)
chr4 (252-297)||(48635158-48635203)
chr4 (251-299)||(11196930-11196978)
chr4 (190-226)||(15841417-15841453)
chr4 (238-297)||(26473701-26473758)
chr4 (190-226)||(32941172-32941208)
chr4 (193-229)||(49880228-49880264)
chr4 (185-229)||(50002494-50002538)
chr4 (185-229)||(54108981-54109024)
[»] chr1 (37 HSPs)
chr1 (253-377)||(31973449-31973572)
chr1 (202-364)||(43834429-43834590)
chr1 (212-311)||(25294859-25294959)
chr1 (252-372)||(34665922-34666041)
chr1 (198-307)||(4392251-4392360)
chr1 (251-363)||(4392022-4392126)
chr1 (200-307)||(15327846-15327953)
chr1 (175-295)||(27686560-27686680)
chr1 (185-229)||(17294645-17294689)
chr1 (185-227)||(45494020-45494062)
chr1 (268-305)||(25294960-25294997)
chr1 (185-226)||(29798270-29798311)
chr1 (192-229)||(44290511-44290548)
chr1 (185-229)||(5320011-5320055)
chr1 (251-299)||(12466281-12466329)
chr1 (185-229)||(26661568-26661612)
chr1 (185-229)||(26661944-26661988)
chr1 (185-229)||(34364993-34365037)
chr1 (238-297)||(5821726-5821785)
chr1 (190-229)||(22077161-22077200)
chr1 (190-229)||(32168749-32168788)
chr1 (185-227)||(37556181-37556223)
chr1 (185-227)||(38804401-38804443)
chr1 (185-227)||(41759553-41759595)
chr1 (302-364)||(47159144-47159206)
chr1 (185-226)||(3550791-3550832)
chr1 (200-229)||(44290886-44290915)
chr1 (281-365)||(7195075-7195158)
chr1 (185-229)||(14318935-14318979)
chr1 (190-226)||(19283506-19283542)
chr1 (191-231)||(30630690-30630730)
chr1 (185-229)||(32594762-32594806)
chr1 (191-231)||(34649504-34649544)
chr1 (185-229)||(39066246-39066290)
chr1 (185-229)||(41157059-41157103)
chr1 (185-229)||(41157443-41157487)
chr1 (185-229)||(44043818-44043862)
[»] scaffold0014 (1 HSPs)
scaffold0014 (175-307)||(197719-197849)
[»] chr2 (32 HSPs)
chr2 (223-364)||(40053386-40053528)
chr2 (185-299)||(28226335-28226449)
chr2 (190-299)||(13792545-13792654)
chr2 (252-357)||(19548086-19548189)
chr2 (255-364)||(44981879-44981987)
chr2 (251-364)||(11727758-11727870)
chr2 (185-374)||(28226581-28226766)
chr2 (190-229)||(29874074-29874113)
chr2 (190-234)||(36178222-36178266)
chr2 (185-229)||(36178651-36178695)
chr2 (183-231)||(37895105-37895153)
chr2 (190-229)||(14745345-14745384)
chr2 (190-229)||(14745718-14745757)
chr2 (190-229)||(15880331-15880370)
chr2 (252-299)||(30219994-30220041)
chr2 (183-229)||(37106256-37106302)
chr2 (185-229)||(6421799-6421843)
chr2 (185-229)||(28254283-28254327)
chr2 (191-227)||(35580776-35580812)
chr2 (190-229)||(962666-962705)
chr2 (190-229)||(31468801-31468840)
chr2 (200-229)||(31385805-31385834)
chr2 (185-234)||(37105987-37106036)
chr2 (190-231)||(40679680-40679721)
chr2 (185-225)||(3672773-3672813)
chr2 (185-229)||(5542671-5542715)
chr2 (185-229)||(6422178-6422222)
chr2 (185-229)||(15511541-15511585)
chr2 (251-299)||(35448727-35448775)
chr2 (193-229)||(35580494-35580530)
chr2 (190-226)||(36178320-36178356)
chr2 (185-229)||(36784306-36784350)
[»] scaffold0548 (1 HSPs)
scaffold0548 (252-357)||(4182-4286)
[»] scaffold0702 (1 HSPs)
scaffold0702 (185-229)||(560-604)
[»] scaffold0078 (1 HSPs)
scaffold0078 (185-229)||(5425-5469)
[»] scaffold0391 (2 HSPs)
scaffold0391 (185-229)||(1737-1781)
scaffold0391 (192-226)||(1159-1193)
[»] scaffold0256 (1 HSPs)
scaffold0256 (252-299)||(13367-13414)
[»] scaffold0160 (1 HSPs)
scaffold0160 (250-295)||(27559-27604)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 185 - 370
Target Start/End: Original strand, 54017594 - 54017779
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  54017594 acaccacactcttacccaaaaccttaaggcaatgggtttatggattccctctcttatatatcctttgtttcttccattcctagtcgatgtgagacataat 54017693  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttccc 370  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  54017694 cactcacacttgattacccaacaatctccccctcaagtgtgaatcacccacatcactagcctgatccacactagggtcccgctccc 54017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 184 - 375
Target Start/End: Original strand, 17731949 - 17732139
Alignment:
Q  184 aacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataa 283  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  17731949 aacaccacactcttactcaaaaccttaaggcaatgggtttatgggttccctttcttatatatcctttgtttcctccattcctagtcgatgtgggacataa 17732048  T
Q  284 tcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||||||||||||| ||||||| ||||| ||||||| ||||||| ||||||||||||| ||||||| |||||||||||| |||| ||||    
T  17732049 tcactcacacttgattatccaacaacctcccactcaagtgtgaatcatccacatcactagcctgatcca-actaggatcccgctcccgctcc 17732139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 184 - 375
Target Start/End: Original strand, 19033180 - 19033370
Alignment:
Q  184 aacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataa 283  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  19033180 aacaccacactcttactcaaaaccttaaggcaatgggtttatgggttccctttcttatatatcctttgtttcctccattcctagtcgatgtgggacataa 19033279  T
Q  284 tcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||||||||||||| ||||||| ||||| ||||||| ||||||| ||||||||||||| ||||||| |||||||||||| |||| ||||    
T  19033280 tcactcacacttgattatccaacaacctcccactcaagtgtgaatcatccacatcactagcctgatcca-actaggatcccgctcccgctcc 19033370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 200 - 361
Target Start/End: Original strand, 43978636 - 43978796
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||||||||||||| ||| |||| ||  ||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43978636 ccaaaaccttaaggcaataggtatatgagtctcctctcttatatatccaatgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 43978735  T
Q  300 acccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggat 361  Q
      ||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||    
T  43978736 ttccaacaatctccccctcaagtgtgaatca-ccacatcactagtttgatccacactaggat 43978796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 16870995 - 16871127
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| ||||||| ||||||||| | ||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||||||| | |||||||    
T  16870995 agagacttaaacacgacactcttacctaaaaccttaaggcaatgagtttatgggttccctctcttatatattctttgtttcctccattccaaatcgatgt 16871094  T
Q  275 gggacataatcactcacacttgattacccaaca 307  Q
    |||||||||||||||||||||||||||||||||    
T  16871095 gggacataatcactcacacttgattacccaaca 16871127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 370
Target Start/End: Original strand, 40195919 - 40196051
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacat 337  Q
    ||||||||||   |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  40195919 ttatatatccaacgtttcctccattcctagtcgatgtgaaacataatcactcacacttgatttcccaacaatctccccctcaagtgtgagtcacccacat 40196018  T
Q  338 cactagcatgatccacactaggatcccgttccc 370  Q
    ||||||| |||||||||||||||||||| ||||    
T  40196019 cactagcctgatccacactaggatcccgctccc 40196051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 16869614 - 16869736
Alignment:
Q  241 tatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattaccc-aacaatctccccctcaagtatgaatcacccacatca 339  Q
    |||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||    
T  16869614 tatatcctttgtttcctctattcctaatcgacatgggacataatcactcacacttgattaccctaacattctcctcctcaagtgtgaatcacccacatca 16869713  T
Q  340 ctagcatgatccacactaggatc 362  Q
    |||||||||||||||||||||||    
T  16869714 ctagcatgatccacactaggatc 16869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 184 - 375
Target Start/End: Complemental strand, 16143551 - 16143361
Alignment:
Q  184 aacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataa 283  Q
    ||||||||||||||| ||||||| ||||||||||| | ||||||||  | | | ||||||||||    ||| ||||||| ||||  ||||||| |||| |    
T  16143551 aacactacactcttacccaaaactttaaggcaatgagcttatgggtctcgtctcttatatatccaacatttgctccatttctagcagatgtggaacatta 16143452  T
Q  284 tcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    |||||||||||||||| || ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| |||||| |||||||||    
T  16143451 tcactcacacttgatttcc-aacaatctccccctcaagtgtgactcacccacatcactaggatgatccacactagaatcccgctcccactcc 16143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 23162231 - 23162108
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatc 350  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||| | || ||||| ||||||||||| ||| |||||||||| |||||| |||||    
T  23162231 gtttcctccattcctaatcgatgtgggacataatcactcacactttatttctcaccaatc-ccccctcaagtgtgagtcacccacattactagcctgatc 23162133  T
Q  351 cacactaggatcccgttcccactcc 375  Q
    |||||||| ||| || |||| ||||    
T  23162132 cacactagaatctcgctcccgctcc 23162108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 362
Target Start/End: Complemental strand, 32201084 - 32200975
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    |||||| ||||  ||||||||||| |||||||||||||||| |||||| ||||||||||||||||| |||  ||| |||||||||||||||||||||||     
T  32201084 tttccttcatttttagtcgatgtgagacataatcactcacatttgatt-cccaacaatctcccccttaagcgtgactcacccacatcactagcatgatct 32200986  T
Q  352 acactaggatc 362  Q
    ||| |||||||    
T  32200985 acattaggatc 32200975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 17735027 - 17735121
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtc 269  Q
    |||||| |||||||  |||||||| ||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| |||||||||||||||||    
T  17735027 agagacttaaacaccgcactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttatatatcttttggttcctccattcctagtc 17735121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 19036296 - 19036390
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtc 269  Q
    |||||| |||||||  |||||||| ||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| |||||||||||||||||    
T  19036296 agagacttaaacaccgcactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttatatatcttttggttcctccattcctagtc 19036390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 48127861 - 48127975
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||  ||| | |||||||||    |||||| |||||  |||| |||||| ||||||||    
T  48127861 acaccacactcttatccaaaacattaaagcaatgggtttatgggtctcctctcttatatatcaaacgtttccaccatttatagttgatgtgtgacataat 48127960  T
Q  285 cactcacacttgatt 299  Q
    |||||||| ||||||    
T  48127961 cactcacatttgatt 48127975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 53596072 - 53595958
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| |||||||||||||| || ||||||||||||  ||| | ||||||||||    ||| ||| ||| |||||| ||||||||||||||    
T  53596072 acaccacactcttacccaaaaccttaaggtaacgggtttatgggtctcctctcttatatatccaacattttctctatttctagtcaatgtgggacataat 53595973  T
Q  285 cactcacacttgatt 299  Q
    ||||| |||||||||    
T  53595972 cactcgcacttgatt 53595958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 53596387 - 53596273
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| |||||||||||||| || ||||||||||||  ||| | ||||||||||    ||| ||| ||| |||||| ||||||||||||||    
T  53596387 acaccacactcttacccaaaaccttaaggtaacgggtttatgggtctcctctcttatatatccaacattttctctatttctagtcaatgtgggacataat 53596288  T
Q  285 cactcacacttgatt 299  Q
    ||||| |||||||||    
T  53596287 cactcgcacttgatt 53596273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 297
Target Start/End: Complemental strand, 43755663 - 43755568
Alignment:
Q  202 aaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    |||||||||||| ||| ||| ||||| |||||||| |||||||||| | ||||| ||||||| || |||||||||||| |||| ||| ||||||||    
T  43755663 aaaaccttaaggtaataggtatatggattccctatcttatatatccatcgtttcatccattcataatcgatgtgggacgtaattacttacacttga 43755568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 43978981 - 43979036
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaac 306  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  43978981 gtttcctccattcttagtcgatgtgggacataatcactcacatttgatttcccaac 43979036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 43481662 - 43481588
Alignment:
Q  223 tatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    ||||||| |||| | ||||||||||    |||||||||||||||||||||||| |||||||||||||||||||||    
T  43481662 tatgggtcccctctcttatatatccaacatttcctccattcctagtcgatgtgagacataatcactcacacttga 43481588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 22304001 - 22304045
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  22304001 acaccacactcttatccaaaaccttaaggcaatgggtttatgggt 22304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 22303703 - 22303749
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  22303703 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgggt 22303749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 32201317 - 32201248
Alignment:
Q  304 aacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccact 373  Q
    ||||||||||||||||||| ||| ||||||||||||||||   || | |||||||||||||| |||||||    
T  32201317 aacaatctccccctcaagtgtgactcacccacatcactagttggacctacactaggatcccgctcccact 32201248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 3135500 - 3135543
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  3135500 acaccacactcttatctaaaaccttaaggcaatgggtttatggg 3135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 40196338 - 40196247
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcac 291  Q
    |||||| ||||||||| | ||| ||||| | |||| |||||||||| |  ||| | ||||||| ||||||||| ||||||||||||||||||    
T  40196338 ccaaaatcttaaggcattaggtatatggataccctttgttatatattcaatgtatactccatttctagtcgatatgggacataatcactcac 40196247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 52634782 - 52634743
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  52634782 acactcttacccaaaaccttaaggcaatgggtttatgggt 52634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 32589809 - 32589771
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  32589809 cactcttacccaaaaccttaaggcaatgggtttatgggt 32589771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 43346837 - 43346883
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  43346837 acaccacactcttacccaaaaccttaaggcaatgagtttatgggttc 43346883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 16868419 - 16868476
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttcc 232  Q
    |||||| ||||||  |||||||||||||||| |||||||||||| |||||||| ||||    
T  16868419 agagacttaaacatcacactcttatccaaaatcttaaggcaatgagtttatggattcc 16868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 23161884 - 23161832
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaa 305  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||| |||||    
T  23161884 tttcctctattcttagtcgatgtgg-acataatcactcacacttgatttcccaa 23161832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 29644632 - 29644673
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  29644632 acactcttacccaaaaccttaagacaatgggtttatgggttc 29644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 12114608 - 12114652
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  12114608 acaccacactcttacccaaaaccttaagacaatgggtttatgggt 12114652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 15772966 - 15772922
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||    
T  15772966 acaccacactcttatccaaaaccttaaagcaatgagtttatgggt 15772922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 22304681 - 22304637
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  22304681 acaccacactcttacccaaaaccttaaggcaatgtgtttatgggt 22304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 23162461 - 23162509
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||    
T  23162461 gtttcatccattcataatcgatatgggacataatcactcacacttgatt 23162509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 39389182 - 39389138
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  39389182 acaccacactcttacccaaaaccttaagacaatgggtttatgggt 39389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 16869833 - 16869892
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccct 234  Q
    |||||| ||||||| ||||||||   |||||||||||||||||| ||||||| |||||||    
T  16869833 agagacttaaacaccacactcttgctcaaaaccttaaggcaatgagtttatgtgttccct 16869892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 29644953 - 29644992
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  29644953 acactcttacccaaaaccttaagacaatgggtttatgggt 29644992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 41359820 - 41359855
Alignment:
Q  194 tcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||| ||||||||||||||||||||||||||||||    
T  41359820 tcttacccaaaaccttaaggcaatgggtttatgggt 41359855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 47964569 - 47964608
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  47964569 acactcttacccaaaaccttaaggcaataggtttatgggt 47964608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 53981580 - 53981541
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcac 291  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  53981580 tttcctccatttctagtcgatgtgggacttaatcactcac 53981541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 1634366 - 1634404
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  1634366 cactcttacccaaaaccttaagccaatgggtttatgggt 1634404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 53118021 - 53118059
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggttt 223  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  53118021 acactacactcttacccaaaatcttaaggcaatgggttt 53118059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 32462609 - 32462646
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  32462609 acactcttatccaaaaccttaaagcaataggtttatgg 32462646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 32462946 - 32462987
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| |||||||||  ||||||||||||||||||||||||||    
T  32462946 acaccacactcttactcaaaaccttaaggcaatgggtttatg 32462987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 37990685 - 37990726
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  37990685 acaccacactcttacccaaaaccttaaggcaatgagtttatg 37990726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 46546376 - 46546413
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||  |||||||||||||||||||||||||||    
T  46546376 acactcttacacaaaaccttaaggcaatgggtttatgg 46546413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 4823767 - 4823723
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||| |||||||||||| ||||||||||    
T  4823767 acaccacactcttacccaaaatcttaaggcaatgagtttatgggt 4823723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 23162001 - 23161913
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcact 288  Q
    |||||| |||||||||  |||| |||| ||  ||| | |||||||||   |||||||||||||| |||||||||  |||||||||||||    
T  23162001 ccaaaatcttaaggcatcgggtatatgagtcacctctcttatatatctaatgtttcctccattcttagtcgatgcaggacataatcact 23161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 35946634 - 35946590
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||| ||| ||||||||||||||||| ||||||||||||    
T  35946634 acaccacacttttacccaaaaccttaaggcaacgggtttatgggt 35946590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 42342141 - 42342177
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  42342141 acactcttacccaaaaccttaaggcaatgagtttatg 42342177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 7e-68; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 175 - 365
Target Start/End: Complemental strand, 41341577 - 41341388
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| ||||||| ||| ||||| | ||||||||||||||||| || |||||||||||| | ||||||||||||||| |||||||||||||||| ||||    
T  41341577 agagacttaaacaccacattcttaccaaaaaccttaaggcaatgagtgtatgggttccctctcttatatatcctttgtctcctccattcctagtc-atgt 41341479  T
Q  275 gggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccg 365  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  41341478 gggacataatcactcacacttgattacccaataatctccccctcaagtgtgaatcacccacatcactagcctgatccacactaggatcccg 41341388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 194 - 375
Target Start/End: Complemental strand, 14169037 - 14168856
Alignment:
Q  194 tcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacac 293  Q
    ||||| ||||||| ||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  14169037 tcttacccaaaactttaaggcaatgagcttatgggttccctctcttatatatcctttgtttcctccattcctagtcgatgtgggacataatcccttacac 14168938  T
Q  294 ttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||    
T  14168937 ttgattatccaacaatctccccctcaagtatgaatcatccacatcactagcatgatccacactagaatcctgttcccgctcc 14168856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 305
Target Start/End: Complemental strand, 41340419 - 41340271
Alignment:
Q  155 caaatgtccaagatcataagagagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgttt 254  Q
    |||| |||||||| |||||||||  | ||||||| |||||||||||||||| |||||||||||| || |||| ||||||| | ||||||||| ||||| |    
T  41340419 caaacgtccaagaccataagaga--cttaaacaccacactcttatccaaaatcttaaggcaatgagtgtatgagttccctctcttatatatcttttgtct 41340322  T
Q  255 cctccattcctagtcgatgtgggacataatcactcacacttgattacccaa 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41340321 cctccattcctagtcgatgtgggacataatcactcacacttgattacccaa 41340271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 5963805 - 5963673
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| ||||||| ||||||||| ||||||||||||||||   | | |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  5963805 agagacttaaacaccacactcttacccaaaaccttaaggcatcagatctatgggttccctctcttatatatcctttgtttcctccattcctagtcgatgt 5963706  T
Q  275 gggacataatcactcacacttgattacccaaca 307  Q
    ||||||||||||| |||||||||||||||||||    
T  5963705 gggacataatcacacacacttgattacccaaca 5963673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 34103669 - 34103543
Alignment:
Q  182 taaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacat 281  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||| |||| || | ||||||||||||| ||||||||||| ||| ||||||||| ||||    
T  34103669 taaacaccacactcttattcaaaaccttaaggcaatgagtttatgagttctctctcttatatatcctttatttcctccatttctattcgatgtggaacat 34103570  T
Q  282 aatcactcacacttgattacccaacaa 308  Q
    ||||||||||||||||||| |||||||    
T  34103569 aatcactcacacttgattatccaacaa 34103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 14169230 - 14169139
Alignment:
Q  65 ccaaaaaacaccggggatttaccataagtgtgctttctattaatgtattttgacacaaatatacacaacaattgaaagcatgcattttaacaaat 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||| ||||||||||||||||||||||    
T  14169230 ccaaaaaacaccggggatttaccataagtgtgctttctattaatgtattttgacacaaaaatac---acaatggaaagcatgcattttaacaaat 14169139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 14169415 - 14169324
Alignment:
Q  65 ccaaaaaacaccggggatttaccataagtgtgctttctattaatgtattttgacacaaatatacacaacaattgaaagcatgcattttaacaaat 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||| ||||||||||||||||||||||    
T  14169415 ccaaaaaacaccggggatttaccataagtgtgctttctattaatgtattttgacacaaaaatac---acaatggaaagcatgcattttaacaaat 14169324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 185 - 343
Target Start/End: Complemental strand, 13042651 - 13042495
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||| | |||||||||   ||||| ||| ||| ||||||||||||||| || ||    
T  13042651 acaccacactcttatccaaaaccttaaggcaatgggtttatgggtctcctctcttatatatctaatgtttgctctatttctagtcgatgtgggatattat 13042552  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactag 343  Q
    |||||||||||||||  ||||||| | ||| ||||||| ||| ||||||||||||||||    
T  13042551 cactcacacttgatt-tccaacaa-ccccctctcaagtgtgactcacccacatcactag 13042495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 343
Target Start/End: Complemental strand, 13112649 - 13112493
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  ||| | |||||||||   ||||| ||| ||| ||||||||||||||| || ||    
T  13112649 acaccacactcttatccaaaaccttaagacaatgggtttatgggtctcctctcttatatatctaatgtttgctctatttctagtcgatgtgggatattat 13112550  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactag 343  Q
    |||||||||||||||  ||||||| | ||| ||||||| ||| ||| ||||||||||||    
T  13112549 cactcacacttgatt-tccaacaa-ccccctctcaagtgtgactcatccacatcactag 13112493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 3294928 - 3294984
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaaca 307  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3294928 gtttcctccattcctagtcgatatgggacataatcactcacacttgattacccaaca 3294984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 13043077 - 13042952
Alignment:
Q  216 atgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctcccc 315  Q
    ||||||||||||||  ||| | ||||||||||  ||||| ||| ||| ||||||||||||||| || ||||||||| |||||||  ||||||||||||||    
T  13043077 atgggtttatgggtctcctctcttatatatccaatgtttgctctatttctagtcgatgtgggagattatcactcactcttgatt-tccaacaatctcccc 13042979  T
Q  316 ctcaagtatgaatcacccacatcacta 342  Q
    ||||||| ||| |||| || |||||||    
T  13042978 ctcaagtgtgactcactcatatcacta 13042952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 13113073 - 13112948
Alignment:
Q  216 atgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctcccc 315  Q
    ||||||||||||||  ||| | ||||||||||  ||||| ||| ||| ||||||||||||||| || ||||||||| |||||||  ||||||||||||||    
T  13113073 atgggtttatgggtctcctctcttatatatccaatgtttgctctatttctagtcgatgtgggagattatcactcactcttgatt-tccaacaatctcccc 13112975  T
Q  316 ctcaagtatgaatcacccacatcacta 342  Q
    ||||||| ||| |||| || |||||||    
T  13112974 ctcaagtgtgactcactcatatcacta 13112948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 36389105 - 36389226
Alignment:
Q  250 tgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgat 349  Q
    ||||| ||||||| ||||| |||||||||||| ||||||| ||||||||| |||||||| ||||||||||||| |||  | ||||||||||||| | |||    
T  36389105 tgtttgctccatttctagttgatgtgggacattatcactcgcacttgatt-cccaacaaactccccctcaagtttga--ctcccacatcactaggacgat 36389201  T
Q  350 ccacactaggatcccgttcccactcc 375  Q
    ||| |||||||| ||| |||||||||    
T  36389202 cca-actaggattccgctcccactcc 36389226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 13042759 - 13042672
Alignment:
Q  250 tgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatc 338  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||||||||||||  |||||| || ||||||||||| ||| |||||||||||    
T  13042759 tgtttgctccatttctagttgatgtggcacataatcactcacacttgatt-tccaacagtccccccctcaagtgtgactcacccacatc 13042672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 13112757 - 13112670
Alignment:
Q  250 tgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatc 338  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||||||||||||  |||||| || ||||||||||| ||| |||||||||||    
T  13112757 tgtttgctccatttctagttgatgtggcacataatcactcacacttgatt-tccaacagtccccccctcaagtgtgactcacccacatc 13112670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 41170748 - 41170702
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  41170748 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgggt 41170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 6500934 - 6500890
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  6500934 acaccacactcttatccaaaaccttaaggcaatgagtttatgggt 6500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 26074724 - 26074680
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  26074724 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 26074680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 18603171 - 18603210
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  18603171 acactcttacccaaaaccttaaggcaatgggtttatgggt 18603210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 32487500 - 32487461
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  32487500 acactcttacccaaaaccttaaggcaatgggtttatgggt 32487461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 9498700 - 9498744
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||    
T  9498700 acaccacactcttacccaaaatcttaaggcaatgggtttatgggt 9498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 26074192 - 26074236
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||    
T  26074192 acaccacactcttacccaaaaccttaaggcaatgggttcatgggt 26074236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 40296361 - 40296405
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  40296361 acaccacactcttacccaaaacctcaaggcaatgggtttatgggt 40296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 6500562 - 6500523
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggttta 224  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  6500562 acaccacactcttacccaaaaccttaaggcaatgggttta 6500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 29549306 - 29549345
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  29549306 acactcttatccaaaaccttaaggtaatgtgtttatgggt 29549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 34753076 - 34753115
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  34753076 acactcttacccaaaaccttaaggcaatcggtttatgggt 34753115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 36521947 - 36521986
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  36521947 acactcttacccaaaaccttaaggcaattggtttatgggt 36521986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 33747883 - 33747841
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| |||||||||||||||| |||||||||||| ||||||||    
T  33747883 acaccacactcttatccaaaatcttaaggcaatgagtttatgg 33747841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 11417028 - 11417065
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||  |||||||||||||||||||||||||||    
T  11417028 acactcttacacaaaaccttaaggcaatgggtttatgg 11417065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 24489257 - 24489298
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||||||||  ||||| |||||||||||||||||||||||||    
T  24489257 acactcttacgcaaaatcttaaggcaatgggtttatgggttc 24489298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 26075223 - 26075252
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||||||||||||||||||||||||    
T  26075223 ccaaaaccttaaggcaatgggtttatgggt 26075252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 26420861 - 26420906
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    ||||||||||| |||||||||||||||| |||  ||||||||||||    
T  26420861 tttcctccatttctagtcgatgtgggacttaactactcacacttga 26420906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 36527146 - 36527183
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  36527146 acactcttatccaaaatcttaaggcaatgcgtttatgg 36527183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 624308 - 624264
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  624308 acaccacactcttacccaaaacctcaaggctatgggtttatgggt 624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 2411117 - 2411073
Alignment:
Q  187 actacactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    ||||||||||||  |||||||||||||||||  ||||||||||||    
T  2411117 actacactcttactcaaaaccttaaggcaataagtttatgggttc 2411073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 3295061 - 3295105
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||| || ||||||||| ||||||||||||||||||||    
T  3295061 acaccacactcatacccaaaacctcaaggcaatgggtttatgggt 3295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 25328047 - 25328003
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||| | |||||||||||    
T  25328047 acaccacactcttacccaaaaccttaaggcattaggtttatgggt 25328003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 182 - 307
Target Start/End: Original strand, 21130100 - 21130225
Alignment:
Q  182 taaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacat 281  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  21130100 taaacaccacactcttatccaaaaccttaaggcaatggatttatgggttccctctcttatatatcttttgtttcctccattcctagtcgatgtgggacat 21130199  T
Q  282 aatcactcacacttgattacccaaca 307  Q
    ||||||||||||||||||||||||||    
T  21130200 aatcactcacacttgattacccaaca 21130225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 155 - 305
Target Start/End: Original strand, 22605273 - 22605421
Alignment:
Q  155 caaatgtccaagatcataagagagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgttt 254  Q
    |||| |||||||| |||||||||  | ||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||  | |||||||||||||||||    
T  22605273 caaacgtccaagaccataagaga--cttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggtttccactcttatatatcctttgttt 22605370  T
Q  255 cctccattcctagtcgatgtgggacataatcactcacacttgattacccaa 305  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22605371 cctccattcctagtcgatgtggaacataatcactcacacttgattacccaa 22605421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 155 - 292
Target Start/End: Original strand, 22605038 - 22605173
Alignment:
Q  155 caaatgtccaagatcataagagagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgttt 254  Q
    ||||||||||||| ||||||||||   |||||||  ||||||||||||||| ||||||  ||||||||||||| |||||| | |||||||||||||||||    
T  22605038 caaatgtccaagaccataagagagt--taaacacctcactcttatccaaaagcttaagaaaatgggtttatggattccctctcttatatatcctttgttt 22605135  T
Q  255 cctccattcctagtcgatgtgggacataatcactcaca 292  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  22605136 cctccgttcctagtcgatgtgggacataatcacccaca 22605173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 238 - 375
Target Start/End: Original strand, 7301399 - 7301535
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacat 337  Q
    ||||||||||   |||||||||||| |||||||||||||||||||||||||||||||| |||   ||||||| ||| |||||| | ||| ||||||||||    
T  7301399 ttatatatccaacgtttcctccatttctagtcgatgtgggacataatcactcacacttaatt-ttcaacaatatcctcctcaactgtgactcacccacat 7301497  T
Q  338 cactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||| ||||||||| |||||||||| |||||||||    
T  7301498 cactagcctgatccacattaggatcccgctcccactcc 7301535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 11637767 - 11637945
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||  ||| | |||||||| |  ||||| || || | ||||||||||| |||||| ||    
T  11637767 acaccacactcttatccaaaatcttaagacaatgggtttatgggtatcctctcttatatattcaatgtttgcttcacttctagtcgatgttggacattat 11637866  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    |||||||||||||||   ||||||||| |||||||||| ||| ||| |||||| ||||| ||||||||||  ||||||||    
T  11637867 cactcacacttgatt-ttcaacaatcttcccctcaagtgtgactcaaccacatgactagaatgatccacataaggatccc 11637945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 21297251 - 21297293
Alignment:
Q  257 tccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  21297251 tccattcctagtcgatgtgggacacaatcactcacacttgatt 21297293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 1846860 - 1846816
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  1846860 acaccacactcttatccaaaaccttaaggcaatggatttatgggt 1846816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 2377866 - 2377822
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  2377866 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 2377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 16454682 - 16454643
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  16454682 acactcttatccaaaatcttaaggcaatgggtttatgggt 16454643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 3058338 - 3058296
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  3058338 acaccacactcttacccaaaaccttaaggcaatgggtttatgg 3058296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 15092346 - 15092284
Alignment:
Q  302 ccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    |||||||||| |||||||||| ||| ||||| |||| |||||  |||||||||||||||||||    
T  15092346 ccaacaatcttcccctcaagtgtgagtcaccaacattactagtctgatccacactaggatccc 15092284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 35210318 - 35210272
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||    
T  35210318 aaacaccacactcttacccaaaaccttaaggcaatggttttatgggt 35210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 16107790 - 16107749
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  16107790 acaccacactcttacccaaaaccttaaggcaatgggtttatg 16107749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 2578489 - 2578533
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||    
T  2578489 acaccacactcttacccaaaaccttaaggctatgggtttatgggt 2578533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 3409371 - 3409327
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  3409371 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 3409327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 3415570 - 3415526
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||    
T  3415570 acaccacactcttaccaaaaaccttaaggcaatgggtttatgggt 3415526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 10074037 - 10074081
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||    
T  10074037 acaccacacttttacccaaaaccttaaggcaatgggtttatgggt 10074081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 10074409 - 10074453
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  10074409 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 10074453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 29518615 - 29518571
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||    
T  29518615 acaccacactcttacccaaaaccttaaggtaatgggtttatgggt 29518571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 29519032 - 29518988
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||    
T  29519032 acaccacactcttacccaaaaccttaaggtaatgggtttatgggt 29518988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 32460631 - 32460667
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32460631 acactcttacccaaaaccttaaggcaatgggtttatg 32460667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 32741291 - 32741247
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||    
T  32741291 acaccacactcttacccaaaaccttaaggtaatgggtttatgggt 32741247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 6250113 - 6250082
Alignment:
Q  268 tcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||||||||||||||||||||||||||    
T  6250113 tcgatgtgggacataatcactcacacttgatt 6250082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 7301701 - 7301744
Alignment:
Q  256 ctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||  |||||||||||||||||||| ||||||||||||||    
T  7301701 ctccatttttagtcgatgtgggacataattactcacacttgatt 7301744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 16455014 - 16454975
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  16455014 acactcttacccaaaaccttaaggcaataggtttatgggt 16454975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 2843662 - 2843624
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  2843662 acactcttacccaaaaccttaaggcaatgagtttatggg 2843624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 6071239 - 6071202
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  6071239 acactcttatccaaaatcttaaggcaatgagtttatgg 6071202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 6999847 - 6999884
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6999847 acactcttatccaaaaccttaaggcagtgagtttatgg 6999884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 22605163 - 22605211
Alignment:
Q  326 aatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| ||||    
T  22605163 aatcacccacatcactagcctgat-cacactaggatcccgctcccgctcc 22605211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 28940923 - 28940980
Alignment:
Q  304 aacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggat 361  Q
    ||||||| |||| |||||||||| | |||||||| |||||| |||| |||||||||||    
T  28940923 aacaatccccccgtcaagtatgagttacccacattactagcctgattcacactaggat 28940980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 1127467 - 1127431
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  1127467 acactcttacccaaaaccttaaggtaatgggtttatg 1127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 307
Target Start/End: Complemental strand, 48071526 - 48071376
Alignment:
Q  155 caaatgtccaagatcataagagagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgttt 254  Q
    |||| ||||||||||||||||||  | ||||||  ||||||||||||||||||||||| |||| |||||||| ||||||| | |||||||||||||||||    
T  48071526 caaacgtccaagatcataagaga--cttaaacatcacactcttatccaaaaccttaagacaataggtttatgagttccctctcttatatatcctttgttt 48071429  T
Q  255 cctccattcctagtcgatgtgggacataatcactcacacttgattacccaaca 307  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48071428 cctccattcctagtcgatgtgggacataatcactgacacttgattacccaaca 48071376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 185 - 375
Target Start/End: Original strand, 21416187 - 21416376
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||  ||| | ||||||||||  | |||  |||||  ||||| |||||||||||||||    
T  21416187 acaccacactcttacccaaaaccctaaggcaatgggtttatgggtctcctctcttatatatccaatttttgttccatgtctagttgatgtgggacataat 21416286  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||||||||||| || || ||| ||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21416287 cactcacacttgatt-cctaaaaatttccccctgaagtgtgactcacccacatcactaggatgatccacactaggatcccgctcccactcc 21416376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 155 - 375
Target Start/End: Complemental strand, 8802640 - 8802415
Alignment:
Q  155 caaatgtccaagatcataagagagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgttt 254  Q
    |||||||||| || |||||||||  | ||||||| ||||||||| |||||| |||||  || || ||||||||||||||  | |||||||||||||||||    
T  8802640 caaatgtccatgaccataagaga--cttaaacaccacactcttacccaaaatcttaaaacagtgagtttatgggttccccctcttatatatcctttgttt 8802543  T
Q  255 cctcc------at-tcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatg 347  Q
    ||  |      || ||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||| ||||||||||||| ||    
T  8802542 ccctctcttatatatcctaatcgatgtgggacataatcactcacactagattacccaacaatctttccctcaagtgtgaatcagccacatcactagcctg 8802443  T
Q  348 atccacactaggatcccgttcccactcc 375  Q
    ||||| |||||||||||| |||| ||||    
T  8802442 atccatactaggatcccgctcccgctcc 8802415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 252 - 370
Target Start/End: Original strand, 11776177 - 11776294
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11776177 tttcctccattcctagttgatgtgggacataatcattcacacttgaat-cccaacaatctccccctcaagtatgagtcacccacatcactagcctgatcc 11776275  T
Q  352 acactaggatcccgttccc 370  Q
    || ||||||||||| ||||    
T  11776276 acgctaggatcccgctccc 11776294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 27391805 - 27391937
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| ||||||| ||||||||| | |||||||||||||| ||| |||||||||| | | | |||||||||||||| |||||||||||||| | |||||    
T  27391805 agagacttaaacaccacactcttacctaaaaccttaaggcagtggatttatgggtttcatgtcttatatatcctttgcttcctccattccta-ttgatgt 27391903  T
Q  275 gggacataatcactcacacttgattacccaacaa 308  Q
    |||||||||||||||||||||||||| |||||||    
T  27391904 gggacataatcactcacacttgattatccaacaa 27391937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 364
Target Start/End: Complemental strand, 27598092 - 27597919
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactc 289  Q
    |||||||||  ||||||| |||| ||||||||||||||||  ||| | ||||||||||   |||| ||| |||  ||||||||||| ||||| |||||||    
T  27598092 acactcttacgcaaaaccctaagacaatgggtttatgggtctcctctcttatatatccaacgtttgctcaatttatagtcgatgtgagacattatcactc 27597993  T
Q  290 acacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    ||||||||||  ||||| ||||| || |||||| ||| |||||||||||||||| ||||||||||||||| ||||    
T  27597992 acacttgatt-tccaacgatctctccttcaagtgtgactcacccacatcactaggatgatccacactagggtccc 27597919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 302
Target Start/End: Complemental strand, 8802344 - 8802199
Alignment:
Q  155 caaatgtccaagatcataagagagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgttt 254  Q
    |||| |||||||| |||||||||  | ||||||| || ||||||  |||||| | ||| ||||| ||||||||||||||| | |||||||||||||||||    
T  8802344 caaacgtccaagaccataagaga--cttaaacaccacgctcttactcaaaacataaagacaatgagtttatgggttccctctcttatatatcctttgttt 8802247  T
Q  255 cctccattcctagtcgatgtgggacataatcactcacacttgattacc 302  Q
    ||||||||||| ||  |||||| | |||||||||||||||||||||||    
T  8802246 cctccattcctcgttaatgtggaatataatcactcacacttgattacc 8802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 23578103 - 23578237
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacat 337  Q
    ||||||||||   |||| ||||||| ||| |||||||||||| ||||||||||||| |||  |||||||||||||| |||||||| ||| | ||||| ||    
T  23578103 ttatatatccaacgttttctccatttctactcgatgtgggacttaatcactcacacatgaa-acccaacaatctccgcctcaagtttgagtgacccatat 23578201  T
Q  338 cactagcatgatccacactaggatcccgttcccact 373  Q
    ||||||| |||| ||| ||||||||||| |||||||    
T  23578202 cactagcctgattcacgctaggatcccgctcccact 23578237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 11776408 - 11776505
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    |||||||||||||| | |  || ||||||| |||| | |||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11776408 ccaaaaccttaaggtattatgtatatgggtcccctctcttatatattcaatgtttcctccattcctagttgatgtgggacataatcactcacacttga 11776505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 2463190 - 2463096
Alignment:
Q  264 ctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactag 358  Q
    |||||||||||| ||||||||||||||||||| |||  |||||||||| | ||| |||| ||| ||||||||||||||| | |||||||| ||||    
T  2463190 ctagtcgatgtgagacataatcactcacacttaattttccaacaatcttctcctaaagtgtgagtcacccacatcactaacctgatccacgctag 2463096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 1085292 - 1085340
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  1085292 aaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttc 1085340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 7517692 - 7517648
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  7517692 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 7517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 11845303 - 11845259
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  11845303 acaccacactcttatccaaaaccttaaggcaatggatttatgggt 11845259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 1085667 - 1085706
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  1085667 acactcttacccaaaaccttaaggcaatgggtttatgggt 1085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 22566713 - 22566752
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22566713 acactcttacccaaaaccttaaggcaatgggtttatgggt 22566752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 2463541 - 2463443
Alignment:
Q  201 caaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||||||||||   ||| |||| || |||| | ||||||||||  | ||||||||||| |||  | |||||||||||||| ||||||||||||||    
T  2463541 caaaaccttaaggcatcaggtatatgtgtcccctctcttatatatccaatatttcctccatttctaaccaatgtgggacataattactcacacttgatt 2463443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 23569053 - 23569091
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  23569053 acactcttacccaaaaccttaaggcaatgggtttatggg 23569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 30253604 - 30253558
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  30253604 acaccacactcttacccaaaaccttaaggcaatgagtttatgggttc 30253558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 23568901 - 23568946
Alignment:
Q  330 acccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||    
T  23568901 acccacatcactaggatgatccacactaggatcctgctcccactcc 23568946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 30244382 - 30244341
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  30244382 acaccacactcttacccaaaaccttaaggcaatgggtttatg 30244341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 23423 - 23467
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||    
T  23423 acaccacactcttacccaaaaccttaaggcaataggtttatgggt 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 6054672 - 6054628
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  6054672 acaccacactcttacccaaaaccttaaggcaatgtgtttatgggt 6054628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 29157677 - 29157633
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||    
T  29157677 acaccacactcttacccaaaaccttaaggcaatggatttatgggt 29157633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 30245189 - 30245145
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  30245189 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 30245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 37533410 - 37533454
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||    
T  37533410 acaccacactcttacccaaaaccttaaggcaatggatttatgggt 37533454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 14681622 - 14681579
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||    
T  14681622 acaccacactcttacccaaaaccttaagacaatgggtttatggg 14681579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 7554137 - 7554095
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||    
T  7554137 acaccacactcttacccaaaaccttaaggctatgggtttatgg 7554095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 16569302 - 16569264
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  16569302 cactcttaccaaaaaccttaaggcaatgggtttatgggt 16569264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 16596360 - 16596398
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  16596360 cactcttaccaaaaaccttaaggcaatgggtttatgggt 16596398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 28300304 - 28300342
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  28300304 acactcttacccaaaatcttaaggcaatgggtttatggg 28300342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 36939777 - 36939823
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||| ||| |||||||||||||||||||| |||||||||    
T  36939777 aaacaccacacttttacccaaaaccttaaggcaatggatttatgggt 36939823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 19122843 - 19122802
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| |||||||||||||||||||| ||||||    
T  19122843 acaccacactcttacccaaaaccttaaggcaatggatttatg 19122802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 28445231 - 28445291
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||||  | ||| |||||||| ||||||||||||||||| |||||||||| ||||||    
T  28445231 ttatatatccaatatttgctccattc-tagtcgatgtgggacattatcactcacagttgatt 28445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 34218080 - 34218121
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||| |||||||||||||    
T  34218080 acaccacactcttacccaaaaccttaagacaatgggtttatg 34218121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 36675252 - 36675191
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||||   |||| |||||||  ||||||||||||||||| |||||||||| ||||||    
T  36675252 ttatatatccaacgttttctccatttatagtcgatgtgggacattatcactcacatttgatt 36675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 45100221 - 45100184
Alignment:
Q  260 attcctagtcgatgtgggacataatcactcacacttga 297  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  45100221 attcctagtcaatgtggaacataatcactcacacttga 45100184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 45754827 - 45754786
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||||| |||||||||||    
T  45754827 acaccacactcttacccaaaaccttaaggctatgggtttatg 45754786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 8128487 - 8128531
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||  ||||||||||||||    
T  8128487 acaccacactcttaaccaaaaccttaaggttatgggtttatgggt 8128531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 21619091 - 21619135
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||| ||| ||||||||||||| ||||||||||||||||    
T  21619091 acaccacacttttacccaaaaccttaagacaatgggtttatgggt 21619135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 22562000 - 22561956
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacactt 295  Q
    |||||||||||||||| ||||| |  |||||||||||||||||||    
T  22562000 gtttcctccattcctattcgatatatgacataatcactcacactt 22561956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 22567085 - 22567129
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| | ||||||||||||||||| ||||||||||    
T  22567085 acaccacactcttaccaaaaaccttaaggcaatgagtttatgggt 22567129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 375
Target Start/End: Original strand, 5981503 - 5981678
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||||||||||   |||  |||||| |||| | ||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5981503 ccaaaaccttaaggcatcaggtacatgggtcccctctcttatatatccaacgttttctccattcctagtcgatgtgggacataatcactcacacttgatt 5981602  T
Q  300 acccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
     || ||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  5981603 tccaaacaatctccccctcaagcgtgagtcacccacatcactagcctgatccacactaggatcccgctcccactcc 5981678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 12156694 - 12156826
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| ||||||  ||||||||| ||||||||||||| ||||||||||||| ||||  | | ||||||||| ||||||||||||||||||| |||||||    
T  12156694 agagacttaaacatcacactcttacccaaaaccttaagacaatgggtttatgagttctttctcttatatatcttttgtttcctccattcctaatcgatgt 12156793  T
Q  275 gggacataatcactcacacttgattacccaaca 307  Q
    |||||||||||||||||||||||||||||||||    
T  12156794 gggacataatcactcacacttgattacccaaca 12156826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 256 - 375
Target Start/End: Original strand, 2954342 - 2954460
Alignment:
Q  256 ctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacac 355  Q
    ||||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  2954342 ctccattcctagtcgatgtgggaaataatcactcacacttgaa-actcaacaatctccccctcaagtgtgagtcacccacatcactagcttgatccacac 2954440  T
Q  356 taggatcccgttcccactcc 375  Q
    |||||||  | |||||||||    
T  2954441 taggatcttgctcccactcc 2954460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 5981795 - 5981894
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||||||||||||||| ||||||||| |||| | ||||||||||   |||||||||||||||| | |||||||||||||||| |||||||||||||    
T  5981795 ccaaaaccttaaggcaatgg-tttatgggtcccctctcttatatatccaacgtttcctccattcctaattgatgtgggacataatccctcacacttgatt 5981893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 14028384 - 14028310
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctc 312  Q
    ||||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||  ||| |||||||    
T  14028384 ttatatatccaatgtttcctctattcctagtcgatgtaggacataatcactcacacttgattttccagcaatctc 14028310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 3671198 - 3671291
Alignment:
Q  196 ttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactc 289  Q
    |||||||||||| ||||||| | ||||||||| |  ||| | ||||||||||   |||||||  ||||||||||||||||||||||||||||||    
T  3671198 ttatccaaaaccctaaggcagtaggtttatggttctcctctcttatatatccaacgtttcctatattcctagtcgatgtgggacataatcactc 3671291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 377
Target Start/End: Original strand, 23753048 - 23753135
Alignment:
Q  288 tcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcctc 377  Q
    |||||||||||| || | ||||||||||||||||| ||| |||||||||||||||  |||||||| ||||| |||||| |||||||||||    
T  23753048 tcacacttgatttcc-atcaatctccccctcaagtgtgattcacccacatcactacgatgatcca-actagaatcccgctcccactcctc 23753135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 2954625 - 2954666
Alignment:
Q  256 ctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  2954625 ctccattcctagtctatgtgggacataatcactcacacttga 2954666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 11576082 - 11576034
Alignment:
Q  259 cattcctagtcgatgtgggacataatcactcacacttgattacccaaca 307  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  11576082 cattcttagtcgacgtgggacataatgactcacacttgattacccaaca 11576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 3038341 - 3038380
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  3038341 acactcttacccaaaaccttaaggcaatgggtttatgggt 3038380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 30441197 - 30441154
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  30441197 acaccacactcttacccaaaaccttaaggcaatgggtttatggg 30441154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 147932 - 147887
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggtt 230  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  147932 acaccacactcttacccaaaaccttaaggcaataggtttatgggtt 147887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 5915979 - 5915935
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  5915979 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 5915935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 9483233 - 9483277
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  9483233 acaccacactcttacccaaaaccttaagacaatgggtttatgggt 9483277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 20870619 - 20870663
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||    
T  20870619 acaccacactcttatccaaaatcttaaggcagtgggtttatgggt 20870663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 29103326 - 29103370
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacactt 295  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||    
T  29103326 gtttcctccattcctagtcgatgtgagacatgattactcacactt 29103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 30359383 - 30359339
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||    
T  30359383 acaccacactcttacccaaaaccttaaggctatgggtttatgggt 30359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 32640583 - 32640618
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttat 225  Q
    ||||||||| ||||||||||||||||||||||||||    
T  32640583 acactcttacccaaaaccttaaggcaatgggtttat 32640618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 40518178 - 40518139
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  40518178 acactcttacccaaaaccttaaggcattgggtttatgggt 40518139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 4840577 - 4840531
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    ||||||||||  |||||||||||||| || |||||||||||||||||    
T  4840577 ttatatatccaatgtttcctccattcatattcgatgtgggacataat 4840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 6651606 - 6651560
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||| ||||||||| |||||||||||||||||||  |||||||||||    
T  6651606 acaccacactcttacccaaaaccttaaggcaatgaatttatgggttc 6651560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 3669799 - 3669758
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  3669799 acaccacactcttacccaaaaccttaaggcaatgagtttatg 3669758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 34834988 - 34834947
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  34834988 acaccacactcttacccaaaaccttaaggcaatgagtttatg 34834947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 3670172 - 3670128
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||| ||| |||||||||||    
T  3670172 acaccacactcttacccaaaaccttaaggaaataggtttatgggt 3670128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 3670856 - 3670940
Alignment:
Q  196 ttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggaca 280  Q
    |||||||||||| ||||| | ||| |||||||||  | | | ||||||||||   |||||||||||| |||||||||||| ||||    
T  3670856 ttatccaaaaccctaaggtagtggatttatgggtctcatctcttatatatccaacgtttcctccatttctagtcgatgtgagaca 3670940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 3671046 - 3671086
Alignment:
Q  335 catcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||||| | ||||||||||||||||||| |||||||||    
T  3671046 catcactaggacgatccacactaggatcccgctcccactcc 3671086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 9507889 - 9507853
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  9507889 acactcttacccaaaaccttaaggtaatgggtttatg 9507853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 18371707 - 18371750
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||    
T  18371707 acaccacactcttacccaaaaccttaaggc-atgggtttatgggt 18371750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 18372038 - 18372082
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||| ||||||||| |||||||||||| |||||| ||||||||    
T  18372038 aaacaccacactcttacccaaaaccttaaagcaatgagtttatgg 18372082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 18829893 - 18829933
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggtt 230  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  18829893 acactcttatccaaaatcctaaggcaatgggtttataggtt 18829933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 33113413 - 33113457
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||| |||||||||||| ||||||||||    
T  33113413 acaccacactcttacccaaaatcttaaggcaatgagtttatgggt 33113457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 34835321 - 34835277
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||| ||||||||||| ||||||||||    
T  34835321 acaccacactcttacccaaaactttaaggcaatgagtttatgggt 34835277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 34835587 - 34835543
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||| ||||||||||| ||||||||||    
T  34835587 acaccacactcttacccaaaactttaaggcaatgagtttatgggt 34835543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 34835853 - 34835809
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||| ||||||||||| ||||||||||    
T  34835853 acaccacactcttacccaaaactttaaggcaatgagtttatgggt 34835809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 9e-49; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 190 - 364
Target Start/End: Complemental strand, 10396523 - 10396350
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactc 289  Q
    |||||||||||||||||| |||||||||||||||||||||  ||| | ||||||||||    ||||||||||| |||||| || || |||||||||||||    
T  10396523 acactcttatccaaaaccctaaggcaatgggtttatgggtctcctctcttatatatccaacatttcctccatttctagtcaatatgagacataatcactc 10396424  T
Q  290 acacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    |||||||||| || ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  10396423 acacttgatttcc-aacaatctccccctcaagtatgactcgcccacatcactaggatgatccacactaggatccc 10396350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 1868158 - 1868040
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactc 289  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  1868158 acactcttacccaaaactttaaggcaatgggtttatgggttccctctcttatatatcatttatttcctccattcttagtcgatgtgggacataatcactc 1868059  T
Q  290 acacttgattacccaacaa 308  Q
    |||||||||||||| ||||    
T  1868058 acacttgattacccgacaa 1868040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 185 - 375
Target Start/End: Complemental strand, 11197338 - 11197149
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||  ||| | ||||||||||   |||||||||||| |||||||||||| | ||||||    
T  11197338 acaccacactcttacccaaaaccctaaggcaatgggtttatgggtctcctctcttatatatccaacgtttcctccatttctagtcgatgtgaggcataat 11197239  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    |||||||||||| ||    |||||||||||  |||||| | | |||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  11197238 cactcacacttggtt-tttaacaatctcccaatcaagtgttactcacccacatcactaggatgatccacaccaggatcccgctcccactcc 11197149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 275 - 364
Target Start/End: Complemental strand, 47680935 - 47680846
Alignment:
Q  275 gggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||    
T  47680935 gggacataatcactcacacttgatttcccaacaatctccccctcaagtgtgagtcacccacatcactagcctgatcctcactaggatccc 47680846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 47681205 - 47681090
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatg--aatcacccacatcactagcatga 348  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||| ||  | ||||||||||||||||| |||    
T  47681205 gtttcctccatttctaatcgatgcgggacataatcactcacactttatttcccaacaatctccccctcaagtgtgttagtcacccacatcactagcctga 47681106  T
Q  349 tccacactaggatccc 364  Q
    ||| ||||||||||||    
T  47681105 tcctcactaggatccc 47681090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 182 - 362
Target Start/End: Complemental strand, 51681653 - 51681474
Alignment:
Q  182 taaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacat 281  Q
    ||||||| ||||||||| |||||| ||||||||||||||| |||| || |||| | ||||||||      ||||||| |||||||||| |||||||||||    
T  51681653 taaacaccacactcttacccaaaatcttaaggcaatgggtatatgagtcccctctcttatatatttcacatttcctcaattcctagtcaatgtgggacat 51681554  T
Q  282 aatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatc 362  Q
    ||||||| ||||||||  ||||| ||||||  ||||||||| ||| |||||||||||||| || ||||||||| |||||||    
T  51681553 aatcacttacacttga-aacccagcaatctttccctcaagtgtgagtcacccacatcactggcctgatccacattaggatc 51681474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 34946223 - 34946346
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatc 350  Q
    |||| ||||||| | ||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  34946223 gtttgctccatttcaagttgatgtgggacattatcactcacacttgatttcc-aacaatctccctctcaagtgtgactcacccacatcactaggatgatc 34946321  T
Q  351 cacactaggatcccgttcccactcc 375  Q
    || |||| ||||||  |||||||||    
T  34946322 caaactatgatcccagtcccactcc 34946346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 361
Target Start/End: Complemental strand, 51681308 - 51681187
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacat 337  Q
    ||||||||||  ||||| |||||||||||||||||| |  |||||||||| ||||||||||| ||||||||||||   || |||| ||| ||||||||||    
T  51681308 ttatatatccaatgttttctccattcctagtcgatgag--acataatcacccacacttgatttcccaacaatctctaacttaagtgtgagtcacccacat 51681211  T
Q  338 cactagcatgatccacactaggat 361  Q
    ||||||| |||||||||| |||||    
T  51681210 cactagcctgatccacacaaggat 51681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 343
Target Start/End: Complemental strand, 47680718 - 47680575
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||||||||||   ||| |||||||  ||| |  ||||||| |  |||||||||||||  || |||||||||||||||||||||||||||| |||    
T  47680718 ccaaaaccttaaggcatcaggtatatgggtctcctctcatatatattcaatgtttcctccatttataatcgatgtgggacataatcactcacacttaatt 47680619  T
Q  300 acccaacaatctccccctcaagtatgaatcacccacatcactag 343  Q
      |||||||||| |||||||||| ||| ||||||| ||||||||    
T  47680618 ttccaacaatcttcccctcaagtgtgagtcacccatatcactag 47680575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 351
Target Start/End: Complemental strand, 47680392 - 47680316
Alignment:
Q  275 gggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||| |||| ||||||    
T  47680392 gggacataatcactcacacttgatttcccaacaatctccccctcaactgtgagtcacccacatcattagcctgatcc 47680316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 8445883 - 8445811
Alignment:
Q  269 cgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcacta 342  Q
    |||||||||||||||||||| | ||||||  ||||||||||||||||||||||| ||| |||||||||||||||    
T  8445883 cgatgtgggacataatcacttagacttgaa-acccaacaatctccccctcaagtgtgattcacccacatcacta 8445811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 12717941 - 12718064
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatc 350  Q
    |||| ||||||| ||| || |||||| |||| ||| ||||||||||||| |  |||||| ||| |||||||| ||| | |||||||||||||| ||||||    
T  12717941 gtttgctccatttctaatcaatgtggaacattatctctcacacttgatttct-aacaatttcctcctcaagtgtgactaacccacatcactaggatgatc 12718039  T
Q  351 cacactaggatcccgttcccactcc 375  Q
    || |||||||||| | |||||||||    
T  12718040 catactaggatcctgctcccactcc 12718064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 2917270 - 2917363
Alignment:
Q  269 cgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcc 363  Q
    ||||||||||||| |||||||||  |||||| || |||||||| |||||||||| ||| ||||||||||||||||  | ||||||||| ||||||    
T  2917270 cgatgtgggacattatcactcacgattgatttcc-aacaatcttcccctcaagtgtgactcacccacatcactaggctaatccacacttggatcc 2917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 10396235 - 10396129
Alignment:
Q  193 ctcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcaca 292  Q
    |||||| | |||||| |||||||||||||||||||||   || | |||||||| |    ||||||||||| || ||||||||| ||||||||||||||||    
T  10396235 ctcttacctaaaaccctaaggcaatgggtttatgggtcttctctcttatatattcaacatttcctccatttcttgtcgatgtgagacataatcactcaca 10396136  T
Q  293 cttgatt 299  Q
    |||||||    
T  10396135 cttgatt 10396129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 11307692 - 11307796
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    |||||||||||  ||||||||||| |||| |||||||||||||| ||| |  | |||||| |||||||| | ||| ||| ||||||||||||| ||||||    
T  11307692 tttcctccatttatagtcgatgtgagacacaatcactcacacttaatttctga-caatcttcccctcaaatgtgagtcatccacatcactagcttgatcc 11307790  T
Q  352 acacta 357  Q
    ||||||    
T  11307791 acacta 11307796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 11307389 - 11307507
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacat 337  Q
    ||||||||||   |||||||||||| ||||| |||||| |||||| ||| ||||||||||||  |  ||||||| |||||| ||  |||||||| |||||    
T  11307389 ttatatatccaaggtttcctccatttctagttgatgtgagacatagtcagtcacacttgatt-tctgacaatct-cccctcgag--tgaatcacacacat 11307484  T
Q  338 cactagcatgatccacactagga 360  Q
    ||||||| |||||||||||||||    
T  11307485 cactagcctgatccacactagga 11307507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 22183313 - 22183352
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22183313 acactcttatccaaaaccttaaggcaatgggtttatgggt 22183352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 922530 - 922424
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||||||||| || |||| ||||||||||||||||  ||| | || ||||||    |||| || |||| ||||||||||||||||||||     
T  922530 acaccacactcttatccaaacccctaagacaatgggtttatgggtctcctctcttctatatctaacgtttgcttcatttctagtcgatgtgggacataaa 922431  T
Q  285 cactcac 291  Q
    |||||||    
T  922430 cactcac 922424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 41370469 - 41370425
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  41370469 acactacactcttacccaaaactttaaggcaatgggtttatgggt 41370425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 49303018 - 49302974
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  49303018 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 49302974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 50630799 - 50630843
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  50630799 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 50630843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 54936308 - 54936264
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  54936308 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 54936264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 1731689 - 1731735
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||||    
T  1731689 aaacaccacactcttacccaaaaccttaaggcaattggtttatgggt 1731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 25483448 - 25483406
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  25483448 acaccacactcttacccaaaaccttaaggcaatgggtttatgg 25483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 44620460 - 44620422
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatggg 228  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  44620460 acactcttacccaaaaccttaaggcaatgggtttatggg 44620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 3271894 - 3271853
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  3271894 acactcttacccaaaaccttaaggcaataggtttatgggttc 3271853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 3340919 - 3340875
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||    
T  3340919 acaccacactcttacccaaaaccttaaggcagtgggtttatgggt 3340875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 4955366 - 4955402
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| |||||||||||||||||||||||||||    
T  4955366 acactcttacccaaaaccttaaggcaatgggtttatg 4955402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 18932793 - 18932837
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||    
T  18932793 acaccacactcttacctaaaaccttaaggcaatgggtttatgggt 18932837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 36629349 - 36629305
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  36629349 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 36629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 55933168 - 55933212
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||    
T  55933168 acaccacactcttacccaaaactttaaggcaatgggtttatgggt 55933212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 26473478 - 26473545
Alignment:
Q  308 atctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactcc 375  Q
    ||||||||||||| | ||| |||||||||||||| || ||||||| || ||||||||| |||| ||||    
T  26473478 atctccccctcaattgtgagtcacccacatcacttgcctgatccagacaaggatcccgctcccgctcc 26473545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 31691259 - 31691220
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  31691259 acactcttacccaaaaccttaaggcaatgagtttatgggt 31691220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 54017644 - 54017683
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  54017644 acactcttacctaaaaccttaaggcaatgggtttatgggt 54017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 16559348 - 16559298
Alignment:
Q  256 ctccattcctagtcgatgtgggacataatcactcacacttgattacccaac 306  Q
    ||||||||||| ||||||||  |||||||| ||||||||||||| ||||||    
T  16559348 ctccattcctaatcgatgtgtaacataatcgctcacacttgatttcccaac 16559298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 23817725 - 23817766
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  23817725 acaccacactcttacccaaaaccttaaggcaatgagtttatg 23817766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 34646693 - 34646734
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  34646693 acaccacactcttacccaaaaccttaaggcaatgagtttatg 34646734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 48635158 - 48635203
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    |||||||||||  || || |||||||||||||||||||||||||||    
T  48635158 tttcctccatttataatcaatgtgggacataatcactcacacttga 48635203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 11196978 - 11196930
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||||||| ||||| ||||||||||||||| |||||  |||||||    
T  11196978 gtttcctccatttctagttgatgtgggacataattactcaagcttgatt 11196930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 15841417 - 15841453
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  15841417 acactcttacccaaaaccttaaggcaatgtgtttatg 15841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 26473701 - 26473758
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    ||||||||||  ||||| ||||||||||| ||||||||||  ||||||||||||| ||||    
T  26473701 ttatatatccaatgttttctccattcctaatcgatgtggg--ataatcactcacagttga 26473758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 32941172 - 32941208
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  32941172 acactcttacccaaaaccttaaggcaatgagtttatg 32941208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 49880264 - 49880228
Alignment:
Q  193 ctcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| |||||||||||||||| |||||||||||||    
T  49880264 ctcttacccaaaaccttaaggcagtgggtttatgggt 49880228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 50002538 - 50002494
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||| |||||| |||||||||    
T  50002538 acaccacactcttacccaaaaccttaagacaatggatttatgggt 50002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 54109024 - 54108981
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||    
T  54109024 acaccacactcttacccaaaac-ttaaggcaatgggtttatgggt 54108981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 31973449 - 31973572
Alignment:
Q  253 ttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcca 352  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||| ||| |||| |||||||||||  |||||||    
T  31973449 ttcctccatttctagtcggtgtgagacataatcactcacacttgatttcc-aacaatctccccctcaagtgtgactcactcacatcactagtctgatcca 31973547  T
Q  353 cactaggatcccgttcccactcctc 377  Q
    ||||||||||||| |||||||||||    
T  31973548 cactaggatcccgctcccactcctc 31973572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 364
Target Start/End: Complemental strand, 43834590 - 43834429
Alignment:
Q  202 aaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattac 301  Q
    ||||||||||| || | ||| ||||||| |||| | |||||||| |    |||| ||||||| ||| ||||||| || ||||||||||||||||||  ||    
T  43834590 aaaaccttaagacattaggtatatgggtcccctctcttatatattcaacatttcatccattcttagccgatgtgagatataatcactcacacttgaa-ac 43834492  T
Q  302 ccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    |||||||||||| |||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  43834491 ccaacaatctccacctcaagtgtgagtcactcacatcactagcctgatccacactaggatccc 43834429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 25294859 - 25294959
Alignment:
Q  212 ggcaatgggtttatgggttccc-tatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatc 310  Q
    ||||||||||| ||||| |||| | | ||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  25294859 ggcaatgggttaatgggatcccctctcttatatatccaatgtttcctccattcctagccaatgtgggacataatcactcacacttgattacccaacaatc 25294958  T
Q  311 t 311  Q
    |    
T  25294959 t 25294959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 252 - 372
Target Start/End: Original strand, 34665922 - 34666041
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| ||||| || ||||||||| ||||||||| ||| | || |||||||||||  ||||||    
T  34665922 tttcctcaatttctagtcgatgtgggatataatcactcacacatgatttcc-aacaatctctccctcaagtgtgatttactcacatcactagtgtgatcc 34666020  T
Q  352 acactaggatcccgttcccac 372  Q
    |||||||||||||| ||||||    
T  34666021 acactaggatcccgctcccac 34666041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 4392251 - 4392360
Alignment:
Q  198 atccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    |||||||| |||||||||   ||| |||||||  ||| ||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  4392251 atccaaaatcttaaggcatcaggtatatgggtctcctctgttatatatccaatgtttcctccattcatagtcgatgtgagacataatcactcacacttga 4392350  T
Q  298 ttacccaaca 307  Q
    || |||||||    
T  4392351 tttcccaaca 4392360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 4392022 - 4392126
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatc 350  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||  ||||||||        ||||||||||||||| |||||    
T  4392022 gtttcctccattcctactcgatgtgggacataatcacttacagttgatttcccaacaatctttccctcaag--------acccacatcactagcctgatc 4392113  T
Q  351 cacactaggatcc 363  Q
    |||||||||||||    
T  4392114 cacactaggatcc 4392126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 15327953 - 15327846
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||| ||| |||  ||| ||||||| |||| | |||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15327953 ccaaaacctcaagacaacaggtatatgggtcccctctcttatatatctaacgtttcctccattcctagtcgatgtgagacataatcactcacacttgatt 15327854  T
Q  300 acccaaca 307  Q
     |||||||    
T  15327853 tcccaaca 15327846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 27686560 - 27686680
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| || |||| ||||||||| ||||||||| ||| |||  ||  |||| |||  || | |||||||||   |||||||||||||||||||||||||    
T  27686560 agagacttagacaccacactcttacccaaaacctcaagtcaacagggatatgagttttctctcttatatatctaatgtttcctccattcctagtcgatgt 27686659  T
Q  275 gggacataatcactcacactt 295  Q
    || ||||||||||||||||||    
T  27686660 ggaacataatcactcacactt 27686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 17294689 - 17294645
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  17294689 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 17294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 45494020 - 45494062
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  45494020 acaccacactcttatccaaaactttaaggcaatgggtttatgg 45494062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 25294960 - 25294997
Alignment:
Q  268 tcgatgtgggacataatcactcacacttgattacccaa 305  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  25294960 tcgatgtgggacataatcactcacaattgattacccaa 25294997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 29798311 - 29798270
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  29798311 acaccacactcttatccaagaccttaaggcaatgggtttatg 29798270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 44290511 - 44290548
Alignment:
Q  192 actcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  44290511 actcttacccaaaaccttaaggcaatgggtttatgggt 44290548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 5320011 - 5320055
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||    
T  5320011 acactacactcttacccaaaaccttaaggctatgagtttatgggt 5320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 12466329 - 12466281
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||| ||||||| ||||| ||||||||||||||||||| ||||||||||    
T  12466329 gttttctccatttctagttgatgtgggacataatcacttacacttgatt 12466281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 26661568 - 26661612
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  26661568 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 26661612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 26661944 - 26661988
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||    
T  26661944 acaccacactcttacccaaaaccttaaggcaatcggtttatgggt 26661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 34365037 - 34364993
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||    
T  34365037 acaccacactcttacccaaaaccttaaggctatgggtttatgggt 34364993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 5821785 - 5821726
Alignment:
Q  238 ttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttga 297  Q
    ||||||||||  ||||||||||||||    |||||||| |||||||||||||||||||||    
T  5821785 ttatatatccaatgtttcctccattctcgatcgatgtgagacataatcactcacacttga 5821726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 22077161 - 22077200
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  22077161 acactcttatccaaaaccttagggcaatgagtttatgggt 22077200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 32168749 - 32168788
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  32168749 acactcttacccaaaacctcaaggcaatgggtttatgggt 32168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 37556223 - 37556181
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||    
T  37556223 acaccacactcttacccaaaaccttaaggctatgggtttatgg 37556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 38804401 - 38804443
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||||||||| ||||||||||||||  ||||||||||||    
T  38804401 acactacactcttacccaaaaccttaaggttatgggtttatgg 38804443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 41759595 - 41759553
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  41759595 acaccacactcttacccaaaaccttaaggcaatggatttatgg 41759553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 47159144 - 47159206
Alignment:
Q  302 ccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    |||||||||| ||  | |||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  47159144 ccaacaatcttccttttaagtgtgactcatccacatcactaggatgatccacactaggatccc 47159206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 3550832 - 3550791
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    |||| ||||||||| ||||||| |||||||||||||||||||    
T  3550832 acaccacactcttacccaaaactttaaggcaatgggtttatg 3550791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 44290886 - 44290915
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||||||||||||||||||||||||    
T  44290886 ccaaaaccttaaggcaatgggtttatgggt 44290915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 7195075 - 7195158
Alignment:
Q  281 taatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccg 365  Q
    |||||| ||||||||||  || ||||||||||||||| || |||||  ||  |||||||||||| |||||||||||  |||||||    
T  7195075 taatcagtcacacttgaa-actcaacaatctcccccttaaatatgagacattcacatcactagcgtgatccacacttagatcccg 7195158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 14318979 - 14318935
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||||| | |||||||||    
T  14318979 acaccacactcttacccaaaaccttaaggcaatagatttatgggt 14318935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 19283506 - 19283542
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  19283506 acactcttatccaaaaccttaaggcgatgagtttatg 19283542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 30630690 - 30630730
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||||||| ||||||| ||||||||||| ||||||||||||    
T  30630690 cactcttacccaaaactttaaggcaatgtgtttatgggttc 30630730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 32594762 - 32594806
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  32594762 acaccacactcttacccaaaaccttaagacaatgagtttatgggt 32594806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 34649544 - 34649504
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||||||| |||||||||||||||| | |||||||||||||    
T  34649544 cactcttacccaaaaccttaaggcattaggtttatgggttc 34649504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 39066246 - 39066290
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||||||||||||||||| |||||  |||||||||    
T  39066246 acaccacactcttatccaaaaccttaagacaatgattttatgggt 39066290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 41157103 - 41157059
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||| |||||| ||||||||||    
T  41157103 acaccacactcttacccaaaaccttaaagcaatgagtttatgggt 41157059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 41157487 - 41157443
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||||||  |||||||| ||||||||||||||||||||    
T  41157487 acaccacactcttactcaaaacctaaaggcaatgggtttatgggt 41157443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 44043818 - 44043862
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||||    
T  44043818 acaccacactcttacccaaaatcttaagacaatgggtttatgggt 44043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 197849 - 197719
Alignment:
Q  175 agagacgtaaacactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgt 274  Q
    |||||| ||||||| ||||||||||||||   ||||||||||||| ||||||| |||||| | ||||||||||||||||||  | |||| |||||||| |    
T  197849 agagacttaaacaccacactcttatccaat--cttaaggcaatggatttatggattccctctcttatatatcctttgtttctgctattcttagtcgatat 197752  T
Q  275 gggacataatcactcacacttgattacccaaca 307  Q
    ||| |||||||||||||| |||||||| |||||    
T  197751 gggtcataatcactcacatttgattactcaaca 197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 40053528 - 40053386
Alignment:
Q  223 tatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaat--ctccccctcaa 320  Q
    |||||||||||| | ||||||||||    |||||||||||  ||| |||||||||||||||| | |||||||||||| |||||||||  | |||||||||    
T  40053528 tatgggttccctctcttatatatccaacatttcctccatttttagccgatgtgggacataattattcacacttgatt-cccaacaatagccccccctcaa 40053430  T
Q  321 gtatgaatcacccacatcactagcatgatccacactaggatccc 364  Q
    || ||| ||||||||||||||||| |||||||  ||||||||||    
T  40053429 gtgtgagtcacccacatcactagcctgatccaggctaggatccc 40053386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 28226449 - 28226335
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| | |||||| |||| ||||| ||||||||||  ||| | ||||||||||   |||||||||||| |||||||||||||||||| |     
T  28226449 acaccacactcttacctaaaaccctaagacaatgtgtttatgggtctcctctcttatatatccaacgtttcctccatttctagtcgatgtgggacattaa 28226350  T
Q  285 cactcacacttgatt 299  Q
    |||||||||||||||    
T  28226349 cactcacacttgatt 28226335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 13792545 - 13792654
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataatcactc 289  Q
    ||||||||| ||||||||| ||| |||||||| || ||||  ||| | |||||||||   | ||||||||||| ||||| ||||||||||||||||||||    
T  13792545 acactcttacccaaaacctcaagtcaatgggtgtacgggtctcctctcttatatatcaaatatttcctccatttctagttgatgtgggacataatcactc 13792644  T
Q  290 acacttgatt 299  Q
    ||||||||||    
T  13792645 acacttgatt 13792654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 357
Target Start/End: Complemental strand, 19548189 - 19548086
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    ||||||| ||| |||||||||||||||||||| ||||||| |||||  ||||||||||| || |||||||| ||| ||||||||||||||||| ||||||    
T  19548189 tttcctctatttctagtcgatgtgggacataaccactcacgcttga-aacccaacaatc-cctcctcaagtgtgagtcacccacatcactagcctgatcc 19548092  T
Q  352 acacta 357  Q
    | ||||    
T  19548091 aaacta 19548086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 364
Target Start/End: Original strand, 44981879 - 44981987
Alignment:
Q  255 cctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactag-catgatccac 353  Q
    |||||||| |||||||||| ||||| ||| ||||||||||||| | || | |||| |||||||||||| ||| |||||||||||||||| | ||||||||    
T  44981879 cctccatttctagtcgatgcgggac-taaccactcacacttgaattcc-agcaatttccccctcaagtgtgagtcacccacatcactagccttgatccac 44981976  T
Q  354 actaggatccc 364  Q
    |||||||||||    
T  44981977 actaggatccc 44981987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 11727758 - 11727870
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatc 350  Q
    |||| ||||||| |||||| |||| | ||||||| |||||||||| |||  | || |||||||| ||| ||| ||| ||||||||||||||||  |||||    
T  11727758 gttttctccatttctagtcaatgtagaacataattactcacacttaattttc-aataatctccctctcgagtgtgagtcacccacatcactagtctgatc 11727856  T
Q  351 cacactaggatccc 364  Q
    ||||||||||||||    
T  11727857 cacactaggatccc 11727870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 374
Target Start/End: Complemental strand, 28226766 - 28226581
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccctatgttatatatcctttgtttcctccattcctagtcgatgtgggacataat 284  Q
    |||| ||||||||| | ||||||| ||| ||||||||||||| ||  ||| | ||||||||||  | ||| | ||||| || ||||||||| || || ||    
T  28226766 acaccacactcttaccaaaaacct-aagacaatgggtttatgagtctcctctcttatatatccaatatttgccccatttcttgtcgatgtgtgatattat 28226668  T
Q  285 cactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatccacactaggatcccgttcccactc 374  Q
    || ||||||||||||  ||||||||||||||||||||  ||| ||| || |||||||||  |||| || |||||||||||| ||||||||    
T  28226667 cagtcacacttgatt-tccaacaatctccccctcaagcgtgactca-cctcatcactaggttgattca-actaggatcccgctcccactc 28226581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 29874074 - 29874113
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29874074 acactcttatccaaaaccttaaggcaatgggtttatgggt 29874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 36178222 - 36178266
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttccct 234  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  36178222 acactcttacccaaaatcttaaggcaatgggtttatgggttccct 36178266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 36178651 - 36178695
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  36178651 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 36178695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 37895105 - 37895153
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  37895105 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgtgttc 37895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 14745345 - 14745384
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  14745345 acactcttacccaaaaccttaaggcaatgggtttatgggt 14745384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 14745718 - 14745757
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  14745718 acactcttacccaaaaccttaaggcaatgggtttatgggt 14745757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 15880370 - 15880331
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  15880370 acactcttacccaaaaccttaaggcaatgggtttatgggt 15880331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 30219994 - 30220041
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||    
T  30219994 tttcctccagttctagtcgatgtgggacataatcgctcacacttgatt 30220041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 37106302 - 37106256
Alignment:
Q  183 aaacactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||    
T  37106302 aaacaccacactcttacccaaaaccttaaggaaatgggtttatgggt 37106256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 6421843 - 6421799
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||    
T  6421843 acaccacactcttacccaaaaccttaaggcaataggtttatgggt 6421799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 28254283 - 28254327
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  28254283 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 28254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 35580776 - 35580812
Alignment:
Q  191 cactcttatccaaaaccttaaggcaatgggtttatgg 227  Q
    |||||||| ||||||||||||||||||||||||||||    
T  35580776 cactcttacccaaaaccttaaggcaatgggtttatgg 35580812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 962705 - 962666
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  962705 acactcttacccaaaaccttaagacaatgggtttatgggt 962666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 31468801 - 31468840
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  31468801 acactcttacccaaaaccttaaggcaatgagtttatgggt 31468840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 31385834 - 31385805
Alignment:
Q  200 ccaaaaccttaaggcaatgggtttatgggt 229  Q
    ||||||||||||||||||||||||||||||    
T  31385834 ccaaaaccttaaggcaatgggtttatgggt 31385805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 37106036 - 37105987
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggttccct 234  Q
    |||| ||||||||| |||||| |||||||||||| |||||||||| ||||    
T  37106036 acaccacactcttacccaaaatcttaaggcaatgagtttatgggtcccct 37105987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 40679680 - 40679721
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatgggttc 231  Q
    ||||||||| |||||| |||||||| ||||||||||||||||    
T  40679680 acactcttacccaaaatcttaaggcgatgggtttatgggttc 40679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 3672813 - 3672773
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttat 225  Q
    |||| ||||||||| |||||| |||||||||||||||||||    
T  3672813 acaccacactcttacccaaaatcttaaggcaatgggtttat 3672773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 5542671 - 5542715
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| | |||||||||||||||| |||||||||||    
T  5542671 acaccacactcttaccaaaaaccttaaggcaataggtttatgggt 5542715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 6422222 - 6422178
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| | ||||||||||||| ||||||||||||||    
T  6422222 acaccacactcttacctaaaaccttaaggctatgggtttatgggt 6422178  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 15511541 - 15511585
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||||    
T  15511541 acaccacactcttacccaaaatcttaagacaatgggtttatgggt 15511585  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 35448727 - 35448775
Alignment:
Q  251 gtttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    |||||||| ||| |||||||||||| ||||||||||  |||||||||||    
T  35448727 gtttcctctatttctagtcgatgtgagacataatcatacacacttgatt 35448775  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 35580494 - 35580530
Alignment:
Q  193 ctcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  35580494 ctcttacccaaaaccttaaggcaatgagtttatgggt 35580530  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 36178320 - 36178356
Alignment:
Q  190 acactcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatg 36178356  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 36784306 - 36784350
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||||    
T  36784306 acacaacacttttatccaaaaccttaagacaaagggtttatgggt 36784350  T

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Target: scaffold0548 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 4182 - 4286
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgattacccaacaatctccccctcaagtatgaatcacccacatcactagcatgatcc 351  Q
    |||||||||||  ||||||||||| |||| |||||||||||||| ||| |  | |||||| |||||||| | ||| ||| ||||||||||||| ||||||    
T  4182 tttcctccatttatagtcgatgtgagacacaatcactcacacttaatttctga-caatcttcccctcaaatgtgagtcatccacatcactagcttgatcc 4280  T
Q  352 acacta 357  Q
    ||||||    
T  4281 acacta 4286  T

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Target: scaffold0702 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 560 - 604
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  560 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 604  T

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Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 5469 - 5425
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| |||||||||||||||| |||||||||||||||||||||||    
T  5469 acaccacactcttatccaaaatcttaaggcaatgggtttatgggt 5425  T

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Target: scaffold0391 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 1737 - 1781
Alignment:
Q  185 acactacactcttatccaaaaccttaaggcaatgggtttatgggt 229  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||    
T  1737 acaccacactcttaccaaaaaccttaaggcaatgggtttatgggt 1781  T

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Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 1159 - 1193
Alignment:
Q  192 actcttatccaaaaccttaaggcaatgggtttatg 226  Q
    ||||||| |||||||||||||||||||||||||||    
T  1159 actcttacccaaaaccttaaggcaatgggtttatg 1193  T

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Target: scaffold0256 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 13414 - 13367
Alignment:
Q  252 tttcctccattcctagtcgatgtgggacataatcactcacacttgatt 299  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||    
T  13414 tttcctccatttctagtcgatgtgtgacttaatcattcacacttgatt 13367  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 27559 - 27604
Alignment:
Q  250 tgtttcctccattcctagtcgatgtgggacataatcactcacactt 295  Q
    |||||| |||||| ||||||||||| | ||||||||||||||||||    
T  27559 tgtttcttccatttctagtcgatgtagaacataatcactcacactt 27604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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