View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8676_low_6 (Length: 304)
Name: NF8676_low_6
Description: NF8676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8676_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 11333744 - 11334007
Alignment:
| Q |
18 |
ataactcacccatctctcttcactctcttcatcattcctcttcctcctcattgctttcctcaccaacccttgatccatcaccggacacctcatcactgac |
117 |
Q |
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| T |
11333744 |
ataactcacccatctctcttcactctcttcatcattcctcttcctcctcattgctttcctcaccaacccttgatccatcaccggacacttcatcactgac |
11333843 |
T |
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| Q |
118 |
aatgactcctcctcttcctccgtcgttgtcaacgttgtcgattcattttctagaagaccgtttagcgttgctccaccgtctgatgtgaagagtaacgcta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11333844 |
aatgactcctcctcttcctccgtcgttgtcaacgttgtcgattcattttctagaagaccgtttagcgttgctccaccgtctgatgtgaagagtaacgcta |
11333943 |
T |
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| Q |
218 |
cattgttttcttcgtgcatgtcgtgttctgtatcgtgatgatgaacaaacaaattcacttgatt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
11333944 |
cattgttttcttcgtgcatgtcgtgttctgtatcgtgatgatgagcaaacaaattcacttgatt |
11334007 |
T |
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