View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8678_high_3 (Length: 266)

Name: NF8678_high_3
Description: NF8678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8678_high_3
NF8678_high_3
[»] chr7 (27 HSPs)
chr7 (18-252)||(8610176-8610410)
chr7 (18-213)||(29577383-29577578)
chr7 (23-120)||(8602238-8602335)
chr7 (26-131)||(8538303-8538408)
chr7 (23-117)||(8382686-8382780)
chr7 (26-131)||(8570578-8570683)
chr7 (23-120)||(8590902-8590999)
chr7 (18-131)||(8636139-8636252)
chr7 (18-168)||(6789771-6789921)
chr7 (26-131)||(8581967-8582072)
chr7 (18-131)||(29581637-29581750)
chr7 (26-131)||(8576593-8576698)
chr7 (26-225)||(8545899-8546098)
chr7 (18-120)||(7877540-7877642)
chr7 (26-120)||(8585513-8585607)
chr7 (26-114)||(3147539-3147627)
chr7 (23-131)||(8559597-8559705)
chr7 (18-120)||(8647136-8647238)
chr7 (29-131)||(8628802-8628904)
chr7 (53-120)||(17260535-17260602)
chr7 (26-120)||(1301731-1301825)
chr7 (18-120)||(17268198-17268300)
chr7 (26-117)||(8659630-8659721)
chr7 (26-120)||(8667686-8667780)
chr7 (26-120)||(13333263-13333357)
chr7 (47-111)||(8017229-8017293)
chr7 (35-131)||(27830671-27830767)
[»] chr8 (2 HSPs)
chr8 (23-131)||(12528768-12528876)
chr8 (26-120)||(43745116-43745208)
[»] chr1 (2 HSPs)
chr1 (26-117)||(15595308-15595399)
chr1 (83-131)||(34466589-34466637)
[»] chr5 (1 HSPs)
chr5 (26-131)||(28220218-28220323)
[»] chr2 (6 HSPs)
chr2 (47-120)||(7542514-7542587)
chr2 (26-137)||(16661782-16661893)
chr2 (47-117)||(12234977-12235047)
chr2 (18-117)||(43625671-43625770)
chr2 (26-120)||(16657324-16657418)
chr2 (26-117)||(14703675-14703766)
[»] chr4 (4 HSPs)
chr4 (47-137)||(30775540-30775630)
chr4 (26-117)||(9335701-9335792)
chr4 (47-120)||(35132736-35132809)
chr4 (47-120)||(23587540-23587613)
[»] chr6 (1 HSPs)
chr6 (29-120)||(11156540-11156631)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 8610176 - 8610410
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8610176 cagccgttggttcattgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 8610275  T
Q  118 agtgatcactgcatctttaagctttgactccaaaaatttctcggctatctctttcattttagcaaggatcatagatgaaatttcttccgcaacaaattgt 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||     
T  8610276 agtgatcactgcatctttaacctttgactccaaaaatttctcggctatctctttcatttttgcaaggatcatagatgaaatttcctccgcaacaaagtgc 8610375  T
Q  218 ttttcctctttcttaaaattaacaacaatcacagg 252  Q
    |||||||||| |||||||| |||||||||||||||    
T  8610376 ttttcctcttccttaaaatgaacaacaatcacagg 8610410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 29577578 - 29577383
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| |  || |||||||| |||||||| |||||||||||||| |||||||| |||||    
T  29577578 cagcagttggttcattgattatccgcattacattgaggccagcaataatgccggcatctttggtggcttttcgctgagaatcattgaaataagctggcac 29577479  T
Q  118 agtgatcactgca-tctttaagctttgactccaaaaatttctcggctatctctttcattttagcaaggatcatagatgaaatttcttccgcaacaaa 213  Q
     |||||||||||| |||||| |   | |||||||||||||||| || ||||| | ||| || |  ||||||||||| || ||||| || ||||||||    
T  29577478 tgtgatcactgcattctttacg-ggtaactccaaaaatttctctgcaatctcctgcatctttgagaggatcatagacgatatttcctcagcaacaaa 29577383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 8602238 - 8602335
Alignment:
Q  23 gttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||| |||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  8602238 gttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcacagt 8602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 8538303 - 8538408
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | ||||| |||||||| ||||||||||| || || ||||    
T  8538303 ggttcattgattatccgcattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcaggtactgtaatca 8538402  T
Q  126 ctgcat 131  Q
    ||||||    
T  8538403 ctgcat 8538408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 8382780 - 8382686
Alignment:
Q  23 gttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    ||||| |||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  8382780 gttggctcattgattatccgcattacattgaggccagcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcac 8382686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 8570578 - 8570683
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    ||||||||||||||||| ||||||||||| ||||||||  ||||||||||||| |||||| | || || |||||||||||||||||||| ||||| ||||    
T  8570578 ggttcattgattatccgcattacattgagaccagcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtacagtaatca 8570677  T
Q  126 ctgcat 131  Q
    ||||||    
T  8570678 ctgcat 8570683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 8590902 - 8590999
Alignment:
Q  23 gttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||||||||| |||||||| |||||||| | ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||| ||||||||    
T  8590902 gttggttcattaattatccgcattacattcaagccagcaatgacaccagcatctttggtagctttcctctgagaatcattaaaataagctggcacagt 8590999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 8636252 - 8636139
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| |||||||||||||||||||| |||||||| ||||| |||||| |||| |||||||| |||| ||| |||||||||||||| |||||||| |||||    
T  8636252 cagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagcatctttggtggatttacgctgagaatcattgaaataagcgggcac 8636153  T
Q  118 agtgatcactgcat 131  Q
    ||| || |||||||    
T  8636152 agtaatgactgcat 8636139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 6789771 - 6789921
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| ||||||||||||||||| || || ||||| || ||||||||| |||| ||||||   ||||||||||| ||||||||||| ||||||||||||||    
T  6789771 cagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggctttccgttgagaatcattgaaataagcaggcac 6789870  T
Q  118 agtgatcactgcatctttaagctttgactccaaaaatttctcggctatctc 168  Q
    ||| || ||||||| ||| | || ||||| |||| ||||||| || |||||    
T  6789871 agtaataactgcattttttatctctgactgcaaatatttctcagcaatctc 6789921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 8581967 - 8582072
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    ||||||||||||||||| ||||||||||| || |||||  ||||||||||||| |||||| | || || |||||||||||||||||||| ||||| ||||    
T  8581967 ggttcattgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtacagtaatca 8582066  T
Q  126 ctgcat 131  Q
    ||||||    
T  8582067 ctgcat 8582072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 29581750 - 29581637
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| |||||||| ||||||||||  ||||||||||||||||| || |  || |||||||| |||||||| |||||||||||||| ||||||||||||||    
T  29581750 cagcagttggttcgttgattatcctcattacattgaggccagctataatgccagcatctttggtggcttttcgctgagaatcattgaaataagcaggcac 29581651  T
Q  118 agtgatcactgcat 131  Q
     || ||||||||||    
T  29581650 ggtaatcactgcat 29581637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 8576593 - 8576698
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    ||||||||||||||| | || |||||||| ||||||||  ||||||||||||| |||||| | || || |||||||||||||||||||||||||  ||||    
T  8576593 ggttcattgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcaggcacagaaatca 8576692  T
Q  126 ctgcat 131  Q
    ||||||    
T  8576693 ctgcat 8576698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 8545899 - 8546098
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    ||||||||||||||||| || ||||| || || |||||  |||||||||||||||||| | |  | || |||||||||||||||||||| ||||| ||||    
T  8545899 ggttcattgattatccgcatgacatttagaccggcaatttcacctgcatcttttgtggatctttgttgtgaatcattaaaataagcaggtacagtaatca 8545998  T
Q  126 ctgcatctttaagctttgactccaaaaatttctcggctatctctttcattttagcaaggatcatagatgaaatttcttccgcaacaaattgtttttcctc 225  Q
    ||||||  ||||    |||||||||||||  ||| || ||||||  ||| |  |  ||||||| |||||| |||||||| |||||||| || ||||||||    
T  8545999 ctgcattcttaacaggtgactccaaaaatgcctctgcaatctctcgcatctgtgagaggatcacagatgatatttcttcagcaacaaagtgcttttcctc 8546098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 7877642 - 7877540
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| ||||||||||| |||||||| || ||||||||||| ||||   |||| ||||||||||||||||| || ||||||||||| |||||||| |||||    
T  7877642 cagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatcttttgtggcttttcgttgagaatcattgaaataagccggcac 7877543  T
Q  118 agt 120  Q
    |||    
T  7877542 agt 7877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 8585607 - 8585513
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||||||||||||||  || ||||| |||||||||||| |||| |||||  | |||||||| |||||||||||||| |||||||||||||||||    
T  8585607 ggttcattgattatcctcataacattaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcattgaaataagcaggcacagt 8585513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 3147539 - 3147627
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcagg 114  Q
    ||||||||||||||||| || | ||| ||||||||||| ||||| |||||| |||| ||||||||||||| |||||| |||||||||||    
T  3147539 ggttcattgattatccgcataatattaaggccagcaataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcagg 3147627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 8559597 - 8559705
Alignment:
Q  23 gttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtga 122  Q
    |||||||||||||||||| | |||||||| || ||||||||  ||||||||||||| |||||| | |  ||||||||||||||||||||||| || || |    
T  8559597 gttggttcattgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcaggtacggtaa 8559696  T
Q  123 tcactgcat 131  Q
    |||| ||||    
T  8559697 tcacagcat 8559705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8647136 - 8647238
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| ||||||||||||||||||||||| | ||| |||||||||||| | || |||||| | |||||||| |||||| ||||||| || || ||||||||    
T  8647136 cagctgttggttcattgattatccggatgatattaaggccagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggcac 8647235  T
Q  118 agt 120  Q
    |||    
T  8647236 agt 8647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 8628802 - 8628904
Alignment:
Q  29 tcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatcactg 128  Q
    |||||||||||||  || ||||| |||||||||||| |||| ||||   | |||||||| |||||||||||||| |||||||||||||| ||||  ||||    
T  8628802 tcattgattatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcaggcacggtgacaactg 8628901  T
Q  129 cat 131  Q
    |||    
T  8628902 cat 8628904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 17260535 - 17260602
Alignment:
Q  53 aggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||||||||| ||||| |||||| | |||||||| |||||||||||||| ||||||||||| |||||    
T  17260535 aggccagcaataacaccagcatctatggtggcttttcgctgagaatcattgaaataagcaggaacagt 17260602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 1301731 - 1301825
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    |||||||| |||||| | || ||||| |||||||||||  |||| |||||| | |||||||| |||||||||||||| ||||  |||||||||||    
T  1301731 ggttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatggtggcttttcgctgagaatcattgaaatgtgcaggcacagt 1301825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 17268198 - 17268300
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| |||||||||||||||| |   | |||||| ||||||||||||||||| |||||| | |||||||| ||||||||||| || || ||||| || ||    
T  17268198 cagcagttggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttgaagtaagccgggac 17268297  T
Q  118 agt 120  Q
    |||    
T  17268298 agt 17268300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 8659630 - 8659721
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||||||| |||||| | || ||||| |||||||||||| |||| | |||| | |||||||| |||||||||||||| || || ||||||||    
T  8659630 ggttcattaattatctgaatgacattaaggccagcaatggcaccggaatctatggtggcttttcgctgagaatcattgaactatgcaggcac 8659721  T

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Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 8667686 - 8667780
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||||||||||||||| || ||||| || ||||||||   ||| |||||| | ||||| || |||||||||||||| || ||||| ||||||||    
T  8667686 ggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctggcacagt 8667780  T

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Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 13333357 - 13333263
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    |||||||||||||| || || | ||| |||||||||||  |||| |||||| | ||||| || |||||||||||||| || ||||| ||||||||    
T  13333357 ggttcattgattattcgaatgatattaaggccagcaatagcaccagcatctatggtggcctttcgctgagaatcattgaagtaagccggcacagt 13333263  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 8017293 - 8017229
Alignment:
Q  47 acattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagc 111  Q
    |||||||| || ||||||||||| ||||| ||||||||||  ||||| |||||||| || |||||    
T  8017293 acattgagtcctgcaatgacaccggcatcctttgtggcttgacgctgcgaatcattgaagtaagc 8017229  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 27830767 - 27830671
Alignment:
Q  35 attatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatcactgcat 131  Q
    |||||||| || ||||| |||||||||||| |||| | ||||   |||||||| || ||||| ||||| |||||||| ||||| || || |||||||    
T  27830767 attatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagagtcattgaaataagctggcacggttattactgcat 27830671  T

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Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 12528768 - 12528876
Alignment:
Q  23 gttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtga 122  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||||   ||||| |||||||| ||||| || ||||| || |    
T  12528768 gttggttcgttgattatccgtattacattgaggccagcaatgacaccagcatccttggtggctcgtcgctgcgaatcattgaaatacgctggcaccgtaa 12528867  T
Q  123 tcactgcat 131  Q
    |||||||||    
T  12528868 tcactgcat 12528876  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 43745116 - 43745208
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    |||||||||||||||   || ||||  || ||||||||| |||| ||||||   ||||||||||||||| ||||||| |||||||| ||||||||    
T  43745116 ggttcattgattatcttcataacatcaagcccagcaatggcaccagcatcta--gtggctttccgctgataatcattgaaataagccggcacagt 43745208  T

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Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 15595308 - 15595399
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    ||||||||||||| ||| || ||||| |||||||||||| ||||||||||| | |||||||| || ||||||||||| | ||||||||||||    
T  15595308 ggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagcaggcac 15595399  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 34466637 - 34466589
Alignment:
Q  83 gctttccgctgagaatcattaaaataagcaggcacagtgatcactgcat 131  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  34466637 gcttttcgctgagaatcattaaaataagcaggcacggtgataactgcat 34466589  T

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Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 28220218 - 28220323
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    |||||||||| |||||  |  ||||| || |||||||||  |||||||||| | ||||||||||||||| ||||||| ||||||||||||||||| || |    
T  28220218 ggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatcattgaaataagcaggcacagtaataa 28220317  T
Q  126 ctgcat 131  Q
    ||||||    
T  28220318 ctgcat 28220323  T

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Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 7542514 - 7542587
Alignment:
Q  47 acattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    |||||||||||||||||| |||| |||||| | |||||||| || ||||||||||||||||||||||| |||||    
T  7542514 acattgaggccagcaatggcacccgcatctatagtggcttttcgttgagaatcattaaaataagcaggtacagt 7542587  T

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Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 16661893 - 16661782
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatca 125  Q
    ||||||||||||||||  |  || || |||||||||||| |||| |||||  | |||||||| ||||||||||| |||||||||||||| |||||||  |    
T  16661893 ggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcaggaacagtgacaa 16661794  T
Q  126 ctgcatctttaa 137  Q
    |||||| |||||    
T  16661793 ctgcatttttaa 16661782  T

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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 12234977 - 12235047
Alignment:
Q  47 acattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    ||||||||||||||||||||||| |||||| | || ||||| || ||||||||||| ||||||||||||||    
T  12234977 acattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcac 12235047  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 43625671 - 43625770
Alignment:
Q  18 cagccgttggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||| ||||||||||||||||  || |  ||||| |||||  ||||||||||  ||||| | |||||||| |||||||||||||| || |||||||||||    
T  43625671 cagctgttggttcattgattactcgtaaaacattaaggccgacaatgacaccaacatctatggtggcttttcgctgagaatcattgaagtaagcaggcac 43625770  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 16657418 - 16657324
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||||||||| || || || ||||| |||||||| ||| |||| |||||| | |||||||| ||||| |||||||| || ||||| ||||||||    
T  16657418 ggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtggcttttcgctgcgaatcattgaagtaagctggcacagt 16657324  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 14703675 - 14703766
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    |||||||| |||| ||  || ||||||||||| ||||| ||||| |||||  | |||||||| |  ||||||||| ||||||||||||||||    
T  14703675 ggttcattcattaccctcataacattgaggccggcaataacaccagcatccatagtggcttttctttgagaatcactaaaataagcaggcac 14703766  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 30775540 - 30775630
Alignment:
Q  47 acattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagtgatcactgcatctttaa 137  Q
    ||||| || ||||||||| |||| |||||  | |||||||| ||||| | |||||| |||||||||||||||||||| ||||||| |||||    
T  30775540 acattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacagtgataactgcatttttaa 30775630  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 9335792 - 9335701
Alignment:
Q  26 ggttcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 117  Q
    ||||||||||||||||| || ||||| |||||||||||   ||| |||||| | ||||| || |||||||||||||| || ||||| |||||    
T  9335792 ggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctggcac 9335701  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 35132736 - 35132809
Alignment:
Q  47 acattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    |||||| | ||||||||  |||| |||||| | |||||||| || ||||||||| |||||||||||||||||||    
T  35132736 acattgggaccagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggcacagt 35132809  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 23587613 - 23587540
Alignment:
Q  47 acattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    |||||||| |||| ||||||||| ||||||||||| ||||  || || ||||| || || ||||||||||||||    
T  23587613 acattgagtccagaaatgacaccggcatcttttgtagcttgacgttgtgaatcgttgaagtaagcaggcacagt 23587540  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 11156540 - 11156631
Alignment:
Q  29 tcattgattatccggattacattgaggccagcaatgacacctgcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt 120  Q
    ||||||||||| || || ||||||||||||||||| ||||| |||||||  ||||  |  || || || |||||||| ||||||||||||||    
T  11156540 tcattgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcattaaagtaagcaggcacagt 11156631  T

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