View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8678_high_4 (Length: 222)
Name: NF8678_high_4
Description: NF8678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8678_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 53700930 - 53701035
Alignment:
| Q |
107 |
ccaattacggaacatgcaaaaactccattaaacatgattaatcatatcaaacgttctgatcttaagatgtgtctgttgttggtgtttccacactttctgt |
206 |
Q |
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| T |
53700930 |
ccaatcacggaacatgcaaaaactccattaaacatgattaatcatatcaaacgttcttatcttaagatgtgtctgttgttggtgtttccacactttctgt |
53701029 |
T |
|
| Q |
207 |
tcttct |
212 |
Q |
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|||||| |
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| T |
53701030 |
tcttct |
53701035 |
T |
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