View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8681_high_6 (Length: 256)

Name: NF8681_high_6
Description: NF8681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8681_high_6
NF8681_high_6
[»] chr3 (29 HSPs)
chr3 (45-256)||(13505764-13505975)
chr3 (67-256)||(15945391-15945580)
chr3 (94-256)||(3340468-3340630)
chr3 (52-256)||(12161313-12161517)
chr3 (61-238)||(16654487-16654664)
chr3 (94-238)||(20157720-20157864)
chr3 (45-236)||(15643833-15644024)
chr3 (87-238)||(22165571-22165722)
chr3 (99-256)||(4369482-4369639)
chr3 (45-236)||(10161457-10161648)
chr3 (61-238)||(10603800-10603977)
chr3 (95-239)||(3278274-3278418)
chr3 (95-239)||(17386561-17386704)
chr3 (94-236)||(13693682-13693824)
chr3 (170-239)||(7599235-7599304)
chr3 (170-239)||(15630222-15630291)
chr3 (170-239)||(16374745-16374814)
chr3 (172-239)||(10145892-10145959)
chr3 (172-239)||(13137435-13137502)
chr3 (170-239)||(13188683-13188752)
chr3 (170-239)||(13196695-13196764)
chr3 (45-130)||(15945342-15945427)
chr3 (100-147)||(12423734-12423781)
chr3 (170-235)||(12188345-12188410)
chr3 (170-239)||(13689546-13689615)
chr3 (45-83)||(3340614-3340652)
chr3 (174-235)||(12194759-12194820)
chr3 (13-45)||(13506843-13506875)
chr3 (95-145)||(14446925-14446972)
[»] chr1 (9 HSPs)
chr1 (45-253)||(20392246-20392454)
chr1 (45-236)||(21799943-21800134)
chr1 (95-236)||(8651829-8651970)
chr1 (158-256)||(3988955-3989053)
chr1 (52-124)||(19783794-19783866)
chr1 (165-239)||(20236355-20236429)
chr1 (102-236)||(19876943-19877077)
chr1 (61-126)||(3988879-3988944)
chr1 (158-205)||(19783885-19783932)
[»] scaffold0022 (2 HSPs)
scaffold0022 (45-256)||(24324-24535)
scaffold0022 (13-45)||(17266-17298)
[»] chr5 (21 HSPs)
chr5 (51-256)||(20439413-20439618)
chr5 (67-256)||(30760891-30761080)
chr5 (52-256)||(25117395-25117599)
chr5 (52-256)||(25176486-25176690)
chr5 (45-236)||(24954446-24954637)
chr5 (87-238)||(26846463-26846614)
chr5 (89-238)||(18071709-18071858)
chr5 (74-238)||(20792050-20792214)
chr5 (61-238)||(20597107-20597284)
chr5 (61-238)||(20603404-20603581)
chr5 (61-238)||(20609723-20609900)
chr5 (99-239)||(21387115-21387255)
chr5 (170-239)||(15734413-15734482)
chr5 (170-239)||(20621042-20621111)
chr5 (170-239)||(23746930-23746999)
chr5 (170-239)||(22318750-22318819)
chr5 (170-239)||(25008049-25008118)
chr5 (61-130)||(30761044-30761113)
chr5 (99-236)||(22947239-22947376)
chr5 (13-45)||(25118474-25118506)
chr5 (13-45)||(25177565-25177597)
[»] chr4 (10 HSPs)
chr4 (94-256)||(15261335-15261497)
chr4 (45-236)||(13821663-13821854)
chr4 (74-256)||(3353406-3353582)
chr4 (95-239)||(15864309-15864453)
chr4 (170-239)||(22109839-22109908)
chr4 (170-239)||(15253224-15253294)
chr4 (13-45)||(15262388-15262420)
chr4 (13-45)||(15960216-15960248)
chr4 (45-83)||(15261481-15261519)
chr4 (13-45)||(16680264-16680296)
[»] chr2 (21 HSPs)
chr2 (44-253)||(27630260-27630469)
chr2 (45-253)||(23160627-23160835)
chr2 (45-253)||(23571884-23572092)
chr2 (45-236)||(16774411-16774602)
chr2 (45-236)||(24796564-24796755)
chr2 (94-256)||(116308-116469)
chr2 (74-176)||(24821413-24821515)
chr2 (183-256)||(27770050-27770123)
chr2 (96-256)||(17867299-17867459)
chr2 (170-239)||(22045926-22045995)
chr2 (170-239)||(25356391-25356460)
chr2 (95-184)||(25372285-25372374)
chr2 (170-239)||(27626473-27626542)
chr2 (170-239)||(26192888-26192957)
chr2 (170-239)||(12880-12949)
chr2 (194-256)||(24821352-24821414)
chr2 (13-45)||(115385-115417)
chr2 (13-45)||(23161704-23161736)
chr2 (13-45)||(23572961-23572993)
chr2 (13-45)||(27629360-27629392)
chr2 (161-236)||(25368890-25368965)
[»] chr8 (18 HSPs)
chr8 (94-253)||(21826188-21826347)
chr8 (74-256)||(29333393-29333575)
chr8 (64-256)||(19766270-19766462)
chr8 (95-239)||(21942720-21942864)
chr8 (96-256)||(11348197-11348357)
chr8 (170-239)||(8313347-8313416)
chr8 (170-239)||(8324117-8324186)
chr8 (170-239)||(22100891-22100960)
chr8 (95-212)||(22830706-22830823)
chr8 (96-239)||(22368762-22368905)
chr8 (170-239)||(21380972-21381041)
chr8 (170-239)||(16419866-16419935)
chr8 (170-239)||(21954958-21955027)
chr8 (170-239)||(22034796-22034865)
chr8 (170-239)||(22098102-22098171)
chr8 (159-239)||(22289893-22289973)
chr8 (99-232)||(21100086-21100219)
chr8 (45-83)||(21826166-21826204)
[»] chr7 (18 HSPs)
chr7 (45-239)||(13672611-13672805)
chr7 (74-256)||(16530827-16531009)
chr7 (74-256)||(16634653-16634835)
chr7 (45-236)||(18594538-18594729)
chr7 (45-236)||(18616955-18617146)
chr7 (61-238)||(16150770-16150947)
chr7 (52-238)||(16761058-16761229)
chr7 (96-256)||(15064566-15064726)
chr7 (96-256)||(824432-824592)
chr7 (95-235)||(20107080-20107220)
chr7 (170-239)||(8716743-8716812)
chr7 (170-239)||(14549975-14550044)
chr7 (170-239)||(18286504-18286573)
chr7 (170-239)||(16466881-16466950)
chr7 (170-239)||(48803125-48803194)
chr7 (170-256)||(15918018-15918104)
chr7 (170-239)||(13656812-13656881)
chr7 (96-145)||(15921352-15921401)
[»] chr6 (12 HSPs)
chr6 (45-236)||(20017509-20017700)
chr6 (45-236)||(22166824-22167015)
chr6 (64-238)||(21561717-21561891)
chr6 (45-236)||(22768399-22768590)
chr6 (52-238)||(11218370-11218556)
chr6 (45-236)||(20168987-20169178)
chr6 (95-239)||(18447012-18447156)
chr6 (170-239)||(24856510-24856579)
chr6 (13-45)||(18427542-18427574)
chr6 (14-45)||(10715863-10715894)
chr6 (170-239)||(18010725-18010794)
chr6 (170-239)||(25966523-25966592)
[»] scaffold0051 (1 HSPs)
scaffold0051 (52-237)||(25655-25840)
[»] scaffold0146 (1 HSPs)
scaffold0146 (74-256)||(21665-21847)
[»] scaffold0078 (1 HSPs)
scaffold0078 (45-256)||(29263-29459)
[»] scaffold0142 (1 HSPs)
scaffold0142 (61-256)||(22242-22437)
[»] scaffold0032 (1 HSPs)
scaffold0032 (94-256)||(90087-90249)
[»] scaffold0230 (1 HSPs)
scaffold0230 (61-238)||(12251-12428)
[»] scaffold0004 (2 HSPs)
scaffold0004 (102-238)||(19242-19378)
scaffold0004 (193-236)||(253154-253197)
[»] scaffold0525 (1 HSPs)
scaffold0525 (94-256)||(942-1105)
[»] scaffold0506 (1 HSPs)
scaffold0506 (52-256)||(3305-3494)
[»] scaffold0029 (1 HSPs)
scaffold0029 (88-238)||(122169-122319)
[»] scaffold0018 (2 HSPs)
scaffold0018 (74-176)||(19579-19681)
scaffold0018 (194-256)||(19518-19580)
[»] scaffold0026 (1 HSPs)
scaffold0026 (95-256)||(132431-132592)
[»] scaffold0402 (1 HSPs)
scaffold0402 (95-239)||(6690-6834)
[»] scaffold1571 (1 HSPs)
scaffold1571 (170-239)||(1501-1570)
[»] scaffold0577 (1 HSPs)
scaffold0577 (170-239)||(4985-5054)
[»] scaffold0375 (2 HSPs)
scaffold0375 (162-239)||(11400-11477)
scaffold0375 (99-147)||(11349-11397)
[»] scaffold0346 (2 HSPs)
scaffold0346 (170-239)||(4857-4926)
scaffold0346 (13-45)||(5893-5925)
[»] scaffold0273 (1 HSPs)
scaffold0273 (87-144)||(24153-24210)
[»] scaffold0216 (1 HSPs)
scaffold0216 (170-239)||(10296-10365)
[»] scaffold0156 (1 HSPs)
scaffold0156 (94-236)||(7763-7905)
[»] scaffold1095 (1 HSPs)
scaffold1095 (170-239)||(2155-2224)
[»] scaffold0473 (1 HSPs)
scaffold0473 (170-239)||(12917-12986)
[»] scaffold0037 (2 HSPs)
scaffold0037 (95-239)||(44238-44382)
scaffold0037 (95-239)||(51627-51771)
[»] scaffold0974 (1 HSPs)
scaffold0974 (170-239)||(3-72)
[»] scaffold0116 (1 HSPs)
scaffold0116 (170-232)||(39013-39075)
[»] scaffold1620 (1 HSPs)
scaffold1620 (170-226)||(274-330)
[»] scaffold0150 (1 HSPs)
scaffold0150 (13-45)||(21846-21878)
[»] scaffold0117 (1 HSPs)
scaffold0117 (161-236)||(32847-32921)
[»] scaffold0231 (1 HSPs)
scaffold0231 (170-236)||(21797-21863)
[»] scaffold1879 (1 HSPs)
scaffold1879 (170-239)||(188-257)
[»] scaffold0020 (2 HSPs)
scaffold0020 (170-239)||(115526-115594)
scaffold0020 (170-239)||(119830-119898)
[»] scaffold0215 (1 HSPs)
scaffold0215 (99-147)||(8343-8391)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 45 - 256
Target Start/End: Complemental strand, 13505975 - 13505764
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13505975 gtgcacatagaacaacataatgaagaagcagaaggtgcacgcttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccatg 13505876  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatggg 244  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  13505875 atgaaggtgaaacaaatgaaaatacaagatgggcatggatgaaaaccgaggtcgaaaggataagcaccgagcaacaaaggcaaggtgttgaattaatggg 13505776  T
Q  245 aataaggaatga 256  Q
    ||||||||||||    
T  13505775 aataaggaatga 13505764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 67 - 256
Target Start/End: Original strand, 15945391 - 15945580
Alignment:
Q  67 aagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaa 166  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  15945391 aagaagcggaaggtgcacacttgcaccacgaagaggaaggtgcacaattgcaccatgatgaggaacaccatgaccatgatgaaggtgaaacaaatgaaaa 15945490  T
Q  167 tacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15945491 tgcaagatgggcatggatgcataccgaggtcgagaggataagcaccgagcaacaaaggcaaggtgttgaattaatgggaataaggaatga 15945580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 94 - 256
Target Start/End: Complemental strand, 3340630 - 3340468
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  3340630 aagaagcggaaggtgcacaaatgcaccatgatgaggagcaccatgaccatgatgaaggtgaaacaaatgaaaatgcaagatgggcatggatgaataccga 3340531  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3340530 ggtcgaaaggataagcaccgagcaacaaaggcaaggtgttgaattaatgggaataaggaatga 3340468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 52 - 256
Target Start/End: Complemental strand, 12161517 - 12161313
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||  |||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||    
T  12161517 tagaacataataatgaagacgaggaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcatcatgatgaggagcaccatgactatgatgacgg 12161418  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataagg 251  Q
     |||  |||||||||| ||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| ||||||||||| | |||| |||||    
T  12161417 agaaacaaatgaaaatgcaagatgggcatggatgcataccgaggtcgagaggataaacaccgagcaacaaaggcaaggtgttgaattgacgggactaagg 12161318  T
Q  252 aatga 256  Q
    |||||    
T  12161317 aatga 12161313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 238
Target Start/End: Original strand, 16654487 - 16654664
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||  ||  ||  |||    
T  16654487 ataatgaaggcgaggaagatgcacatttgcaccaagaagaagaaggtgcacaattgtaccatgatgaggagcaccatgaccatgatgccggataaacaaa 16654586  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||||||||||||||| ||||||||| ||| ||||| |||||| |||||| |||||| |||| ||||||    
T  16654587 tgaaaatgcaagatgggcatggatgcataccgaggccgagaggataagcaccaagcaactaaggcaaggtgatgaatt 16654664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 20157864 - 20157720
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||  || ||| | |||||||||  |||||| ||||||||  |||||||    
T  20157864 aagaagaggaaggtgcacacttgcaccatgatgaggagcaccatgaccatgatgccggagaaaacaatgaaaatgaaagatgagcatggatacataccga 20157765  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||| || ||||| ||||||||| ||||||||||||||||||||||    
T  20157764 ggtggagaggataagcaccgagaaacaaaggcagggtgttgaatt 20157720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 236
Target Start/End: Original strand, 15643833 - 15644024
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||| |||| |||||||||| | || | |||| ||||||| || ||||||||||||||||||||||||||||||||||   ||||||||| |     
T  15643833 gtgcacatagagcagcctaatgaagaaacagaggatgcacacttgcatcaggaagaggaaggtgcacaactgcaccatgatgaggcataccatgacccta 15643932  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||| ||||  ||||||  || |||||||||||||||||| ||||||||| ||||| || | |||| ||||||||||||| |||||||||    
T  15643933 atgaagatgaaacaaatgaggatgcaagatgggcatggatgactaccgaggttgaaagaataaacaccaagcaacaaaggcaaggtgttgaa 15644024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 22165722 - 22165571
Alignment:
Q  87 ttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatga 186  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||  ||  |||||||||| ||||||| |||||||||     
T  22165722 ttgcaccaagaagaggaaggtgcacaattgtaccatgatgaggagcaccatgaccatgatgccggataaacaaatgaaaatgcaagatgagcatggatgc 22165623  T
Q  187 ataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||||| | | ||||| |||||| |||||| |||||| |||||||||||    
T  22165622 ataccgaggactagaggataagcaccaagcaactaaggcaaggtgttgaatt 22165571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 4369482 - 4369639
Alignment:
Q  99 gaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcg 198  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||  ||  ||  |||||||||| ||||||||||||||||| ||||||||| ||    
T  4369482 gaggaaggtgcgcaattgcaccatgatgaggagcaccatgaccatgatgccggataaacaaatgaaaatgcaagatgggcatggatgcataccgaggccg 4369581  T
Q  199 aaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | ||||| |||||| |||||| |||||| |||||||||||   |||| ||||||||||    
T  4369582 agaggataagcaccaagcaactaaggcaaggtgttgaattttcgggactaaggaatga 4369639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 10161648 - 10161457
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||||||||| | |||||||||| | || | |||| ||||||| |  ||||||||||||||||||||||||||||| ||||   |||||||||||     
T  10161648 gtgcacatagaacaacctaatgaagaaacagaggatgcacacttgcatccggaagaggaaggtgcacaactgcaccatgaagaggcataccatgaccata 10161549  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||| ||||  |||||   || |||||||||||||||||| ||||||||| ||||| || | |||||||||||||||||| |||||||||    
T  10161548 atgaagatgaaacaaatgcggatgcaagatgggcatggatgactaccgaggttgaaagaataaacaccgagcaacaaaggcaaggtgttgaa 10161457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 10603977 - 10603800
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||  ||  ||  |||    
T  10603977 ataatgaaggcgaggaagatgcacatttgcaccaagaagaggaaggtgcacaattgtaccatgataaggagcaccatgaccatgatgccggataaacaaa 10603878  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||||||||||||||| |||| ||||  || ||||| | |||| |||||| |||| | ||||| |||||    
T  10603877 tgaaaatgcaagatgggcatggatgcatactgaggctgagaggataaacaccaagcaactaagggaaggtgtggaatt 10603800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 3278274 - 3278418
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||  || ||| | |||||||||  |||||||||||||||| | || |||    
T  3278274 agaagaggaaggtgcacacttgcaccatgatgaggaacaccatgaccatgatgtcggagaaaacaatgaaaatgaaagatgggcatggatgcaaactgag 3278373  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || || ||||| | |||| |||||||||| || ||||||||||||    
T  3278374 gttgagaggataaacaccaagcaacaaagacaaggtgttgaatta 3278418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 17386561 - 17386704
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||  ||   | | |||| ||||  |||||||||||||||  | ||| ||    
T  17386561 agaagaggaaggtgcacacttgcaccatgatgaggagcaccatgaccatgatgccggaagaaataatg-aaatgaaagatgggcatggatacacacctag 17386659  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || || ||||| |||| ||||||||||||||| ||||||||||||    
T  17386660 gttgagaggataagcaacgagcaacaaaggcaaggtgttgaatta 17386704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 13693682 - 13693824
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||| ||||||||||||  |||||||||||||||||||||||| |||||||   || | | | || ||  ||  ||||||| |||||||| | |||||    
T  13693682 aagaagcggaaggtgcacacttgcaccatgatgaggagcaccatggccatgatatcggaggaaacaacgatcatgaaagatggacatggatgtaaaccga 13693781  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    ||| |||||||| |||||||||||||||||||| |||||||||    
T  13693782 ggttgaaaggataagcaccgagcaacaaaggcaaggtgttgaa 13693824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 7599235 - 7599304
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  7599235 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 7599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 15630291 - 15630222
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  15630291 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 15630222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 16374814 - 16374745
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  16374814 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 16374745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 10145892 - 10145959
Alignment:
Q  172 gatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  10145892 gatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 10145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 13137502 - 13137435
Alignment:
Q  172 gatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  13137502 gatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 13137435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 13188752 - 13188683
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  |||||||  ||||||||||||||||||| ||||||||||||    
T  13188752 aagatgggcatggatgcaaaccgaggtacaaaggataggcaccgagcaacaaaggcaaggtgttgaatta 13188683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 13196764 - 13196695
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | || |||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  13196764 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 13196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 15945342 - 15945427
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgagga 130  Q
    |||| |||||| |||||||||||||| || || |||||| ||||||||||||||| ||||||||||||  ||||||| || |||||    
T  15945342 gtgcacatagagcagcataatgaagaggcagatggtgcacacttgcaccaagaagcggaaggtgcacacttgcaccacgaagagga 15945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 12423781 - 12423734
Alignment:
Q  100 aggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatg 147  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  12423781 aggaagatgcacaattgcaccatgatgaggagcaccatgaccatgatg 12423734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 12188410 - 12188345
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttga 235  Q
    |||||||||||||||| | ||||||||  ||||||| || ||||||||||||||||| ||||||||    
T  12188410 aagatgggcatggatgcaaaccgaggtacaaaggataagaaccgagcaacaaaggcaaggtgttga 12188345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 13689546 - 13689615
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | || |||||  ||||||| |||||||| ||||||||||| ||||||||||||    
T  13689546 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgaacaacaaaggcaaggtgttgaatta 13689615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 3340652 - 3340614
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgca 83  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  3340652 gtgcacatagaacagcataatgaagaagcggaaggtgca 3340614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 12194820 - 12194759
Alignment:
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttga 235  Q
    |||||||||||| | ||||||||  ||||||| || ||||||||||||||||| ||||||||    
T  12194820 tgggcatggatgcaaaccgaggtacaaaggataagaaccgagcaacaaaggcaaggtgttga 12194759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 13506875 - 13506843
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    ||||||||||||||||||||||||||| |||||    
T  13506875 catcaccttcagggacaacaagcaaagagatag 13506843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 14446972 - 14446925
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatga 145  Q
    ||||||||||||||||||  |||||||||||   |||||||||||||||||    
T  14446972 agaagaggaaggtgcacatttgcaccatgat---gagcaccatgaccatga 14446925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 45 - 253
Target Start/End: Original strand, 20392246 - 20392454
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||||||||||| |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  20392246 gtgcacatagaacagcgtaatgaagaagcagaaggtgcccacttgcactaagaagaggaaggtgcacaaatgcaccatgatgaggagcaccataaccatg 20392345  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatggg 244  Q
    |||||||||||  |||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  20392346 atgaaggtgaaacaaatgaaaatgcacgatgggcatggatgaatatcgaggtcgaaaggataagcaccgagcaacaaaggcaaggtgttgaattaatggg 20392445  T
Q  245 aataaggaa 253  Q
    |||||||||    
T  20392446 aataaggaa 20392454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 21800134 - 21799943
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||| |||| |||||||||| | || | |||| ||||||| || ||||||||||||||||||||||||||||||||||   ||||||||| |     
T  21800134 gtgcacatagagcagcctaatgaagaaacagaggatgcacacttgcatcaggaagaggaaggtgcacaactgcaccatgatgaggcataccatgacccta 21800035  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||| ||||  ||||||  || |||||||||||||||||| ||||||||| ||||| || | |||||||||||||||||| |||||||||    
T  21800034 atgaagatgaaacaaatgaggatgcaagatgggcatggatgactaccgaggttgaaagaataaacaccgagcaacaaaggcaaggtgttgaa 21799943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 236
Target Start/End: Original strand, 8651829 - 8651970
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  |||||||| |||| |||||||||||| | ||||  || | | | ||||| |||  |||||||||||||||| | ||||||    
T  8651829 agaagaggaaggtgcacacttgcaccattatgatgagcaccatgacgaggatgccggaggaaacaatgagaatgaaagatgggcatggatgcacaccgag 8651928  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    || |||| ||| ||||||||||||||||||||  ||||||||    
T  8651929 gttgaaatgataagcaccgagcaacaaaggcaatgtgttgaa 8651970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 3988955 - 3989053
Alignment:
Q  158 aaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| ||||| |||||| |||||| |||||| |||||||||||   |||| ||||||||||    
T  3988955 aaatgaaaatgcaagatgggcatggatgcataccgaggccgagaggataagcaccaagcaactaaggcaaggtgttgaattgtcgggactaaggaatga 3989053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 19783794 - 19783866
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatga 124  Q
    |||||||  |||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  19783794 tagaacacgataatgaagacgaggaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatga 19783866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 20236355 - 20236429
Alignment:
Q  165 aatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||| |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  20236355 aataaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 20236429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 19877077 - 19876943
Alignment:
Q  102 gaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaa 201  Q
    ||||||||| |  |||||||||||||||||||||||||||||||    || | | |   || ||||  |||||||||||||||| | || |||||| |||    
T  19877077 gaaggtgcaaacttgcaccatgatgaggagcaccatgaccatgacaccggaggaaactttgcaaatgaaagatgggcatggatgcaaactgaggtccaaa 19876978  T
Q  202 ggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||| ||||||||||||||||| || |||||||||    
T  19876977 ggataagcaccgagcaacaaagacaaggtgttgaa 19876943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 3988879 - 3988944
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatg 126  Q
    |||||||||  | ||||| |||| | ||||||||||||||||||||||||||| ||||||||||||    
T  3988879 ataatgaaggcgaggaagatgcacatttgcaccaagaagaggaaggtgcacaattgcaccatgatg 3988944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 19783885 - 19783932
Alignment:
Q  158 aaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggat 205  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| |||||    
T  19783885 aaatgaaaatgcaagatgggcatggatgcataccgaggccgagaggat 19783932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 45 - 256
Target Start/End: Original strand, 24324 - 24535
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||| ||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  24324 gtgcacatagagcagcataatgaagaagcagacggtgcacacttgcaccaagaagaggaagatgcacaattgcaccatgatgaggagcaccataaccatg 24423  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatggg 244  Q
    |||||||||||  |||||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  24424 atgaaggtgaaacaaatgaaaatacaagatgggaatggatgcatactgaggtcgaaaggataagcaccgagcaacaaaggcaaggtgttgaattaatggg 24523  T
Q  245 aataaggaatga 256  Q
    | ||||||||||    
T  24524 actaaggaatga 24535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 17266 - 17298
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  17266 catcaccttcagggacaacaagcaaagggatag 17298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 51 - 256
Target Start/End: Complemental strand, 20439618 - 20439413
Alignment:
Q  51 atagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaag 150  Q
    |||||||||| ||||||||| | |||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||    
T  20439618 atagaacagcctaatgaagacgtggaaggtgcacacccgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccacaatgaag 20439519  T
Q  151 gtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataag 250  Q
    |||||  |||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||    
T  20439518 gtgaaacaaatgaaaatgcaagatgggcatggatgcataccgaggtcgagaggataagcaccgagcaacaaaggcaaggtgttgaattaattggaataag 20439419  T
Q  251 gaatga 256  Q
    ||||||    
T  20439418 gaatga 20439413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 67 - 256
Target Start/End: Complemental strand, 30761080 - 30760891
Alignment:
Q  67 aagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaa 166  Q
    |||||| | |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  |||  |||||||||    
T  30761080 aagaagagcaaggtgcacaattgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccataatgaagaagaaacaaatgaaaa 30760981  T
Q  167 tacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| |||| |||||    
T  30760980 tgcaagatgggcatggatgcataccgaggtcgagaggataagcaccgagcaacaaaggcaaggtgttgaattaatgggactaagaaatga 30760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 52 - 256
Target Start/End: Complemental strand, 25117599 - 25117395
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||| | ||||||||   |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  25117599 tagaacagaacaatgaagacatggaaggtgcacaattgcaccaagaagaggaaggtgcacaattgcacaatgatgagaagcaccatgaccatgatgaagg 25117500  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataagg 251  Q
    ||||  |||||||||| ||||||||||||||||| |||  |||||||  ||||| ||||||||| |||||||||| |||||||||||||||||| |||||    
T  25117499 tgaaacaaatgaaaatgcaagatgggcatggatgcatattgaggtcgggaggataagcaccgagtaacaaaggcaaggtgttgaattaatgggactaagg 25117400  T
Q  252 aatga 256  Q
    |||||    
T  25117399 aatga 25117395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 52 - 256
Target Start/End: Complemental strand, 25176690 - 25176486
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||| | ||||||||   |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  25176690 tagaacagaacaatgaagacatggaaggtgcacaattgcaccaagaagaggaaggtgcacaattgcacaatgatgagaagcaccatgaccatgatgaagg 25176591  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataagg 251  Q
    ||||  |||||||||| ||||||||||||||||| |||  |||||||  ||||| ||||||||| |||||||||| |||||||||||||||||| |||||    
T  25176590 tgaaacaaatgaaaatgcaagatgggcatggatgcatattgaggtcgggaggataagcaccgagtaacaaaggcaaggtgttgaattaatgggactaagg 25176491  T
Q  252 aatga 256  Q
    |||||    
T  25176490 aatga 25176486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 24954637 - 24954446
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||||||||||||||||||||||   || |||||| ||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||| |     
T  24954637 gtgcacatagaacagcataatgaagaaatagagggtgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgataaggaacaccatgacccta 24954538  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  24954537 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaa 24954446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 26846463 - 26846614
Alignment:
Q  87 ttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatga 186  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||   ||||||||| |||||||||||||||||     
T  26846463 ttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccatgatgccggagaaaccaatgaaaatgcaagatgggcatggatgc 26846562  T
Q  187 ataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    | ||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  26846563 acaccgaggtcgagaggataagcaccgagcaacaaaggcaaggtgttgaatt 26846614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 18071709 - 18071858
Alignment:
Q  89 gcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaat 188  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||  ||  |||||||||| ||||||||||||||||| ||    
T  18071709 gcaccaagaagaggaaggtgcacaattgtaccatgatgaggagcaccatgaccatgatgccggataaacaaatgaaaatgcaagatgggcatggatgcat 18071808  T
Q  189 accgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| | | ||||| |||||| |||||| |||||| |||||||||||    
T  18071809 accgaggactagaggataagcaccaagcaactaaggcaaggtgttgaatt 18071858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 74 - 238
Target Start/End: Complemental strand, 20792214 - 20792050
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    ||||| |||| | ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||  ||  ||  |||||||||| |||||    
T  20792214 ggaagatgcacatttgcaccaagaagaggaaggtgcacaattgtaccatgataaggagcaccatgaccatgatgccggataaacaaatgaaaatgcaaga 20792115  T
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    |||||||||||| |||| |||| ||| ||||| |||||| || ||| |||||| |||||||||||    
T  20792114 tgggcatggatgcatacagaggccgagaggataagcaccaagaaactaaggcaaggtgttgaatt 20792050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 20597284 - 20597107
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | |||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||  ||  ||  |||    
T  20597284 ataatgaaggcgaggaagatgcatatttgcaccaagaagaggaaggtggacaattgtaccatgataaggagcaccatgaccatgatgccggataaacaaa 20597185  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||| |||||||||||  || ||||| ||| ||||| |||||| |||||| |||||| |||||||||||    
T  20597184 tgaaaatgcaagacgggcatggatgcctaacgaggccgagaggataagcaccaagcaactaaggcaaggtgttgaatt 20597107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 20603581 - 20603404
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | |||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||  ||  ||  |||    
T  20603581 ataatgaaggcgaggaagatgcatatttgcaccaagaagaggaaggtggacaattgtaccatgataaggagcaccatgaccatgatgccggataaacaaa 20603482  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||| |||||||||||  || ||||| ||| ||||| |||||| |||||| |||||| |||||||||||    
T  20603481 tgaaaatgcaagacgggcatggatgcctaacgaggccgagaggataagcaccaagcaactaaggcaaggtgttgaatt 20603404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 20609900 - 20609723
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | |||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||  ||  ||  |||    
T  20609900 ataatgaaggcgaggaagatgcatatttgcaccaagaagaggaaggtggacaattgtaccatgataaggagcaccatgaccatgatgccggataaacaaa 20609801  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||| |||||||||||  || ||||| ||| ||||| |||||| |||||| ||| || |||||||||||    
T  20609800 tgaaaatgcaagacgggcatggatgcctaacgaggccgagaggataagcaccaagcaactaagacaaggtgttgaatt 20609723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 21387115 - 21387255
Alignment:
Q  99 gaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcg 198  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||     | ||| |   |||||||  ||| |||||||||||| | || ||||| |    
T  21387115 gaggaaggtgcaaacttgcaccatgatgaggagcaccatgaccatgacacttgagaaaactttgaaaatgaaaggtgggcatggatgcaaactgaggttg 21387214  T
Q  199 aaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  21387215 aaaggataagcaccgagcaacaaaggcaaggtattgaatta 21387255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 15734413 - 15734482
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  15734413 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 15734482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 20621042 - 20621111
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  20621042 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 20621111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 23746930 - 23746999
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  23746930 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 23746999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 22318819 - 22318750
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | || |||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  22318819 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 22318750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 25008118 - 25008049
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||||| |||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  25008118 aagatggacatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 25008049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 30761113 - 30761044
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgagga 130  Q
    |||||||||| | |||||||||| ||||||||||||||||| ||||||||||| ||||||| || |||||    
T  30761113 ataatgaagatgtggaaggtgcacacttgcaccaagaagagcaaggtgcacaattgcaccaagaagagga 30761044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 22947239 - 22947376
Alignment:
Q  99 gaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcg 198  Q
    |||||||||||| |  ||||||||| |||||||||||||||||||||    || | | ||  |||||||  ||||||| |||||||| | || |||||      
T  22947239 gaggaaggtgcaaacttgcaccatgttgaggagcaccatgaccatgacaccggaggaaaatttgaaaatgaaagatggccatggatgcaaacggaggttt 22947338  T
Q  199 aaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    | ||||| |||||| ||||||||||||| |||||||||    
T  22947339 agaggataagcaccaagcaacaaaggcaaggtgttgaa 22947376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 25118506 - 25118474
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    ||||||||||||||||||||||||||| |||||    
T  25118506 catcaccttcagggacaacaagcaaagagatag 25118474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 25177597 - 25177565
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    ||||||||||||||||||||||||||| |||||    
T  25177597 catcaccttcagggacaacaagcaaagagatag 25177565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 94 - 256
Target Start/End: Complemental strand, 15261497 - 15261335
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  15261497 aagaagaggaaggtgcacaaatgcaccatgatgaggagcaccatgaccatgatgaaggtgaaacaaatgaaaatgcaagatgggcatggatgaataccga 15261398  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15261397 ggtcgaaaggataagcaccgagcaacaaaggcaaggtgttgaattaatgggcataaggaatga 15261335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 236
Target Start/End: Original strand, 13821663 - 13821854
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||||||||||||||||||| | || |||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |     
T  13821663 gtgcacatagaacagcataatgaagaaacagagggtgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgatgaggaacaccatgacccta 13821762  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  13821763 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaa 13821854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 3353406 - 3353582
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||| |||   |||   ||||||||| |||||    
T  3353406 ggaaggtgcatatttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatg---atgacgaa---gaaaccaatgaaaatgcaaga 3353499  T
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| | ||||||||||| ||||| || ||||||||||||||||| |||||||||||   |||| ||||||||||    
T  3353500 tgggcatggatgcacaccgaggtcgagaggataagtaccgagcaacaaaggcaaggtgttgaattgtcgggactaaggaatga 3353582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 15864309 - 15864453
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||  || |   | |||||||||| ||||||| |||||||  | |  |||    
T  15864309 agaagaggaaggtgcacatttgcaccatgatgaggagcaccatgaccatgatgctggaggcaacaatgaaaataaaagatggacatggatacacaatgag 15864408  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || || ||||| ||||| ||||||||| | || ||||||||||||    
T  15864409 gttgagaggataagcactgagcaacaatgacaaggtgttgaatta 15864453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 22109839 - 22109908
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  22109839 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 22109908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 15253224 - 15253294
Alignment:
Q  170 aagatgggcatggatgaataccg-aggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||| |||||||||| | |||| ||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  15253224 aagattggcatggatgcaaaccgcaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 15253294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 15262420 - 15262388
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  15262420 catcaccttcagggacaacaagcaaagggatag 15262388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 15960248 - 15960216
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  15960248 catcaccttcagggacaacaagcaaagggatag 15960216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 15261519 - 15261481
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgca 83  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  15261519 gtgcacatagaacagcataatgaagaagaggaaggtgca 15261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 16680264 - 16680296
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    ||||||||||||||||||||||||||| |||||    
T  16680264 catcaccttcagggacaacaagcaaagagatag 16680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 8e-70; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 44 - 253
Target Start/End: Original strand, 27630260 - 27630469
Alignment:
Q  44 agtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccat 143  Q
    ||||| |||||| || ||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  27630260 agtgcacatagaccaacatcatgaagaagcagaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccct 27630359  T
Q  144 gatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgg 243  Q
    |||||||||||   | |||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||    
T  27630360 gatgaaggtgacacacatgaaaatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaactaatgg 27630459  T
Q  244 gaataaggaa 253  Q
    | ||||||||    
T  27630460 gcataaggaa 27630469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 45 - 253
Target Start/End: Complemental strand, 23160835 - 23160627
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||| || ||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  23160835 gtgcacatagaccaacatcatgaagaagcagaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccctg 23160736  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatggg 244  Q
    ||||||||||   |||||||||| |||||||||||||||||| ||||||||||||||| || || ||||||||||||||||| ||||||||| |||||||    
T  23160735 atgaaggtgacacaaatgaaaatgcaagatgggcatggatgactaccgaggtcgaaagaataagtaccgagcaacaaaggcaaggtgttgaactaatggg 23160636  T
Q  245 aataaggaa 253  Q
     ||||||||    
T  23160635 cataaggaa 23160627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 45 - 253
Target Start/End: Complemental strand, 23572092 - 23571884
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||| || ||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  23572092 gtgcacatagaccaacatcatgaagaagcagaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccctg 23571993  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatggg 244  Q
    ||||||||||   |||||||||| |||||||||||||||||| ||||||||||||||| || || ||||||||||||||||| ||||||||| |||||||    
T  23571992 atgaaggtgacacaaatgaaaatgcaagatgggcatggatgactaccgaggtcgaaagaataagtaccgagcaacaaaggcaaggtgttgaactaatggg 23571893  T
Q  245 aataaggaa 253  Q
     ||||||||    
T  23571892 cataaggaa 23571884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 236
Target Start/End: Original strand, 16774411 - 16774602
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||||||||||||||||||| | || |||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |     
T  16774411 gtgcacatagaacagcataatgaagaaacagagggtgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgatgaggaacaccatgacccta 16774510  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  16774511 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaa 16774602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 24796755 - 24796564
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||||||||||||||||||| | || | |||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |     
T  24796755 gtgcacatagaacagcataatgaagaaacagaggatgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgatgaggaacaccatgacccta 24796656  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || | |||||||||||||||||| |||||||||    
T  24796655 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataaacaccgagcaacaaaggcaaggtgttgaa 24796564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 256
Target Start/End: Original strand, 116308 - 116469
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||||| ||||||||||| |||||||||| || |||||| |||||||| ||||||  |||  |||||||||| | ||||||||||||||| |||||||    
T  116308 aagaagagaaaggtgcacaattgcaccatgaggaagagcac-atgaccataatgaagaagaaacaaatgaaaatgcgagatgggcatggatgcataccga 116406  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  116407 ggtcgagaggataagcatcgagcaacaaaggcaaggtgttgaattaatgggactaaggaatga 116469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 24821515 - 24821413
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||   ||||||||| |||||    
T  24821515 ggaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccatgatgccggagaaaccaatgaaaatgcaaga 24821416  T
Q  174 tgg 176  Q
    |||    
T  24821415 tgg 24821413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 27770123 - 27770050
Alignment:
Q  183 atgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27770123 atgaataccgaggtcgaaaggataagcaccgagcaacaaaggcaaggtgttgaattaatgggaataaggaatga 27770050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 17867459 - 17867299
Alignment:
Q  96 gaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgagg 195  Q
    |||||||||||||||||  ||||||| || ||||| ||||||||||||||    || | | ||||||| |||  ||||||| ||||||||   |||||||    
T  17867459 gaagaggaaggtgcacacttgcaccaagaagaggatcaccatgaccatgaaactggaggaaaaaatgataatgaaagatggacatggatgcgaaccgagg 17867360  T
Q  196 tcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | |||||||| ||||||||||||| |||||  ||||||||||||  |||| ||||||||||    
T  17867359 ttgaaaggataagcaccgagcaactaaggctaggtgttgaattatcgggactaaggaatga 17867299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 22045995 - 22045926
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  22045995 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 22045926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 25356391 - 25356460
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  25356391 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 25356460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 25372374 - 25372285
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggat 184  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||  || | | | |||||||||  |||||||||||||||    
T  25372374 agaagaggaaggtgcacacttgcaccatgatgaggagcaacatgaccatgatgccggaggaaacaatgaaaatgaaagatgggcatggat 25372285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 27626473 - 27626542
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  27626473 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 27626542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 26192957 - 26192888
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||||| |||||||| | |||||||| |||||||| ||||||||| |||||||||| ||||||||||||    
T  26192957 aagatggacatggatgcaaaccgaggttgaaaggataagcaccgagtaacaaaggcaaggtgttgaatta 26192888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 12949 - 12880
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  |||| || ||||||||||||||||| || ||||||||||||    
T  12949 aagatgggcatggatgcaaaccgaggtacaaagaataagcaccgagcaacaaagacaaggtgttgaatta 12880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 24821414 - 24821352
Alignment:
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||| ||||| ||||||||||| |||||||| ||||||||||||  |||| ||||||||||    
T  24821414 ggtcgagaggataagcaccgagcatcaaaggcaaggtgttgaattatcgggactaaggaatga 24821352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 115385 - 115417
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  115385 catcaccttcagggacaacaagcaaagggatag 115417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 23161736 - 23161704
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  23161736 catcaccttcagggacaacaagcaaagggatag 23161704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 23572993 - 23572961
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  23572993 catcaccttcagggacaacaagcaaagggatag 23572961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 27629360 - 27629392
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  27629360 catcaccttcagggacaacaagcaaagggatag 27629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 25368965 - 25368890
Alignment:
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||  |||||||||||||||| | || |||||  | ||||| |||||||||||||||||||| | |||||||    
T  25368965 tgaaaatgaaagatgggcatggatgcaaactgaggttcagaggataagcaccgagcaacaaaggcaagatgttgaa 25368890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 94 - 253
Target Start/End: Original strand, 21826188 - 21826347
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||    
T  21826188 aagaagaggaaggtgcacaaatgcaccatgatgaggagcaccatgaccatgatgaaggtgaaacaaatgaaaatgcacgatgggcatggatgaataccga 21826287  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaa 253  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  21826288 ggtcgaaaggataaccaccgagcaacaaaggcaaggtgttgaattaatgggaataaggaa 21826347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 29333393 - 29333575
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    ||||| |||| | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||   ||||||||| |||||    
T  29333393 ggaagatgcacatttgcaccaagaagaggaaggtgcacaattgcaccatgatgaagagcaccatgaccatgatgcaggagaaaccaatgaaaatgcaaga 29333492  T
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||| || |||  ||||||||||   |||| ||||||||||    
T  29333493 tgggcatggatgcataccgaggtcgagaggataagcaccgagcaactaacgcaaagtgttgaattgtcgggactaaggaatga 29333575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 256
Target Start/End: Original strand, 19766270 - 19766462
Alignment:
Q  64 atgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatga 163  Q
    |||||| || ||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||   |||||    
T  19766270 atgaaggagaggaagatgcacatttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccatgatgccggagaaaccaatga 19766369  T
Q  164 aaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||| ||||||||||||||||| | || |||||||| | ||| |||||||||||| ||||||| |||||||||||   |||| ||||||||||    
T  19766370 aaatgcaagatgggcatggatgcaaacagaggtcgagaagataagcaccgagcaaaaaaggcaaggtgttgaattgtcgggactaaggaatga 19766462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 239
Target Start/End: Complemental strand, 21942864 - 21942720
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  ||||||| || ||||||||||||||||||||    || | | | ||||| |||  ||||||| |||||||| | ||||||    
T  21942864 agaagaggaaggtgcacacttgcaccaagaggaggagcaccatgaccatgaaaccggaggaaacaatgataatgaaagatggacatggatgcaaaccgag 21942765  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || |||||||| ||||||||| |||||||||| ||||||||||||    
T  21942764 gttgaaaggataagcaccgagtaacaaaggcaaggtgttgaatta 21942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 11348357 - 11348197
Alignment:
Q  96 gaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgagg 195  Q
    |||||||||||||||||  ||||||| || ||||| ||||||||||||||    || | | | ||||| |||  ||||||| |||||||| | |||||||    
T  11348357 gaagaggaaggtgcacacttgcaccaagaagaggatcaccatgaccatgaaaccggaggaaacaatgataatgaaagatggacatggatgcaaaccgagg 11348258  T
Q  196 tcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | |||||||| ||||||||||||| |||||| |||||  |||||  |||| ||||||||||    
T  11348257 ttgaaaggataagcaccgagcaactaaggcaaggtgtcaaattatcgggactaaggaatga 11348197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 8313347 - 8313416
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  8313347 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 8313416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 8324186 - 8324117
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  8324186 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 8324117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 22100960 - 22100891
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  22100960 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 22100891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 22830706 - 22830823
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||||  || | |   |||||||||  ||||||||||||||| || || |||    
T  22830706 agaagaggaaggtgcacacttgcaccatgatgaggagcaccatgactatgatgccggaggaatcaatgaaaatgaaagatgggcatggataaacactgag 22830805  T
Q  195 gtcgaaaggatcagcacc 212  Q
    || || ||||| ||||||    
T  22830806 gttgagaggataagcacc 22830823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 22368762 - 22368905
Alignment:
Q  96 gaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgagg 195  Q
    |||||||||||||||||  ||||||| || ||||| ||||||||||||||    |  | | | ||||| |||  ||||||| |||||||| | |||||||    
T  22368762 gaagaggaaggtgcacacttgcaccaagaagaggatcaccatgaccatgaaaccgtaggaaacaatgataatgaaagatggacatggatgcaaaccgagg 22368861  T
Q  196 tcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    | ||||||||  |||||||| |||||||||| ||||||||||||    
T  22368862 ttgaaaggatatgcaccgagtaacaaaggcaaggtgttgaatta 22368905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 21380972 - 21381041
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||| ||||||    
T  21380972 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgtcgaatta 21381041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 16419935 - 16419866
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | || |||||  ||||||| |||||||| ||||||||||| ||||||||||||    
T  16419935 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgaacaacaaaggcaaggtgttgaatta 16419866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 21954958 - 21955027
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||  | ||||||||  ||||||| ||||||||||||||||| || ||||||||||||    
T  21954958 aagatgggcatggatccaaaccgaggtacaaaggataagcaccgagcaacaaagacaaggtgttgaatta 21955027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 22034865 - 22034796
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||| |||||||||| | ||||||||  |||| || |||||||||||||||||||| ||||||||||||    
T  22034865 aagattggcatggatgcaaaccgaggtacaaagaataagcaccgagcaacaaaggcaaggtgttgaatta 22034796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 22098102 - 22098171
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | | ||||||  ||||||| ||||| |||||||||||||| ||||||||||||    
T  22098102 aagatgggcatggatgcaaatcgaggtacaaaggataagcactgagcaacaaaggcaaggtgttgaatta 22098171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 22289893 - 22289973
Alignment:
Q  159 aatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||  |||||||||||| ||| | || ||||| || ||||| |||||||||||||||||||| | ||||||||||    
T  22289893 aatgaaaatgaaagatgggcatgaatgcaaactgaggttgagaggataagcaccgagcaacaaaggcaagatgttgaatta 22289973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 21100219 - 21100086
Alignment:
Q  99 gaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcg 198  Q
    ||||||||||||||| |||||||  |||||||||||||||||| |||||  || | |   ||| | |||  |||||||||||||||  | |  ||||| |    
T  21100219 gaggaaggtgcacaaatgcaccaaaatgaggagcaccatgaccctgatgtcggaggaatcaataacaatgaaagatgggcatggatacacaatgaggtag 21100120  T
Q  199 aaaggatcagcaccgagcaacaaaggcagggtgt 232  Q
    | ||||| | |||||||||||||||||| |||||    
T  21100119 agaggataaacaccgagcaacaaaggcaaggtgt 21100086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 21826166 - 21826204
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgca 83  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  21826166 gtgcacatagaacagcataatgaagaagaggaaggtgca 21826204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 239
Target Start/End: Original strand, 13672611 - 13672805
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||||||||||||||||||| | || |||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |     
T  13672611 gtgcacatagaacagcataatgaagaaacagagggtgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgatgaggaacaccatgacccta 13672710  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  13672711 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaatta 13672805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 16530827 - 16531009
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    |||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||    
T  16530827 ggaaggtgcacaattgcaccaagaagaggaaggtgcacaattacaccatgatgaggagcaccatgaccatgatgaaggtgaaacaaatgaaaatgcaaga 16530926  T
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||| ||||||| ||| ||||||| |||||| ||||||||||    
T  16530927 tgggcatggatgcataccgaggtcgagaggataagcaccgagcaagaaaggcaaggtattgaattgatgggactaaggaatga 16531009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 16634835 - 16634653
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    |||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||    
T  16634835 ggaaggtgcacaattgcaccaagaagaggaaggtgcacaattacaccatgatgaggagcaccatgaccatgatgaaggtgaaacaaatgaaaatgcaaga 16634736  T
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||| ||||||| ||| ||||||| |||||| ||||||||||    
T  16634735 tgggcatggatgcataccgaggtcgagaggataagcaccgagcaagaaaggcaaggtattgaattgatgggactaaggaatga 16634653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 18594729 - 18594538
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||| |||||||||||||||||| | |  |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |     
T  18594729 gtgcacattgaacagcataatgaagaaacagcgggtgcacacttgcatcaagaagaggaaggtgcacaactgcaccatgatgaggaccaccatgacccta 18594630  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || ||||| |||||||||||||| |||||||||    
T  18594629 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcactgagcaacaaaggcaaggtgttgaa 18594538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 236
Target Start/End: Original strand, 18616955 - 18617146
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||| |||||||||||||||||| | |  |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |     
T  18616955 gtgcacattgaacagcataatgaagaaacagcgggtgcacacttgcatcaagaagaggaaggtgcacaactgcaccatgatgaggaccaccatgacccta 18617054  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || ||||| |||||||||||||| |||||||||    
T  18617055 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcactgagcaacaaaggcaaggtgttgaa 18617146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 16150947 - 16150770
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||  ||  |||    
T  16150947 ataatgaaggcgaggaagatgcacatttgcaccaagaagaggaaggtgcacaattgtaccatgatgaggagcaccatgaccatgatgccggataaacaaa 16150848  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||||||||||||||| ||||||||| ||| ||||| |||||| |||||| |||||| |||||||||||    
T  16150847 tgaaaatgcaagatgggcatggatgcataccgaggccgagaggataagcaccaagcaactaaggcaaggtgttgaatt 16150770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 238
Target Start/End: Complemental strand, 16761229 - 16761058
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||| |||||||||| | |||||||||| ||||||||||||| ||||||||||||||| ||||||||||               ||||||||||||    
T  16761229 tagaacagaataatgaagacgtggaaggtgcacacttgcaccaagaggaggaaggtgcacaattgcaccatga---------------ccatgatgaagg 16761145  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||  ||| | |||| ||||||||||||||||| ||||||||||||| ||||| |||||| |||||| |||||| |||||||||||    
T  16761144 tgaaacaaacgtaaatgcaagatgggcatggatgcataccgaggtcgagaggataagcacctagcaactaaggcaaggtgttgaatt 16761058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 15064566 - 15064726
Alignment:
Q  96 gaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgagg 195  Q
    |||||||||||||||||  ||||||| || ||||| ||||||||||||||    || | | | ||||| |||| ||||||| |||||||| | |||||||    
T  15064566 gaagaggaaggtgcacacttgcaccaagaagaggatcaccatgaccatgaaaccggaggaaacaatgataataaaagatggacatggatgcaaaccgagg 15064665  T
Q  196 tcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | |||||||| ||||||||||||| | |||| ||||||||||||  |||| ||||||||||    
T  15064666 ttgaaaggataagcaccgagcaactacggcaaggtgttgaattatcgggactaaggaatga 15064726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 824432 - 824592
Alignment:
Q  96 gaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgagg 195  Q
    ||||||||||||||||| |||||||| || ||||| ||||||||||||||    ||   | | ||||| |||  ||||||| |||||||| | || ||||    
T  824432 gaagaggaaggtgcacacctgcaccaagaagaggatcaccatgaccatgaaaccggacgaaacaatgataatgaaagatggacatggatgcaaactgagg 824531  T
Q  196 tcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    | |||||||| ||||||||||||| |||||| ||||||||||||  |||| ||||||||||    
T  824532 ttgaaaggataagcaccgagcaactaaggcaaggtgttgaattatcgggactaaggaatga 824592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 20107080 - 20107220
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    |||||||||||||| |||  ||||||||| ||||||||||||||||||||||   || | | | ||||| |||  |||||||||||||||| | |  |||    
T  20107080 agaagaggaaggtgtacacttgcaccatgctgaggagcaccatgaccatgataccggaggaaacaatgataatgaaagatgggcatggatgcacatagag 20107179  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttga 235  Q
    || || ||||| ||||||| |||||||||||| ||||||||    
T  20107180 gttgagaggataagcaccgtgcaacaaaggcaaggtgttga 20107220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 8716743 - 8716812
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  8716743 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 8716812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 14549975 - 14550044
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  14549975 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 14550044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 18286504 - 18286573
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  18286504 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 18286573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 16466950 - 16466881
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  | ||||| |||||||||||||||||||| ||||||||||||    
T  16466950 aagatgggcatggatgcaaaccgaggtacagaggataagcaccgagcaacaaaggcaaggtgttgaatta 16466881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 48803194 - 48803125
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | || |||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  48803194 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 48803125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 15918104 - 15918018
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    ||||||| ||| |||| | || ||||| |||||||| ||||||||||||| |||||| ||||||||||||  |||| ||||||||||    
T  15918104 aagatggacatcgatgcaaactgaggttgaaaggataagcaccgagcaactaaggcaaggtgttgaattatcgggactaaggaatga 15918018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 13656812 - 13656881
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | || |||||  ||||||| |||||||| ||||||||||| ||||||||||||    
T  13656812 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgaacaacaaaggcaaggtgttgaatta 13656881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 15921401 - 15921352
Alignment:
Q  96 gaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatga 145  Q
    |||||||||||||||||  ||||||| || ||||| ||||||||||||||    
T  15921401 gaagaggaaggtgcacacttgcaccaagaagaggatcaccatgaccatga 15921352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 20017700 - 20017509
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||||||||||||||||||| | || |||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |     
T  20017700 gtgcacatagaacagcataatgaagaaacagagggtgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgatgaggaacaccatgacccta 20017601  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  20017600 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaa 20017509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 22167015 - 22166824
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||||||||||||||||||| | || |||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |     
T  22167015 gtgcacatagaacagcataatgaagaaacagagggtgcacacttgcatcaagaagaggaaggtgctcaactgcaccatgatgaggaacaccatgacccta 22166916  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||  ||||||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  22166915 atgaaggtgaaacaaatgaagatgcaagatgggcatggatgactaccgaggtcgaaagaataagcaccgagcaacaaaggcaaggtgttgaa 22166824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 64 - 238
Target Start/End: Complemental strand, 21561891 - 21561717
Alignment:
Q  64 atgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatga 163  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||  || |||  ||||||    
T  21561891 atgaagacgaggaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcatcatgaccgtgatgccggagaaacaaatga 21561792  T
Q  164 aaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    |||| ||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  21561791 aaatgcaagatgggcatggatgcatatcgaggtcgagaggataagcaccgagcaacaaaggcaaggtgttgaatt 21561717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 45 - 236
Target Start/End: Complemental strand, 22768590 - 22768399
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| |||||| ||||||||||||||| | || | |||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |     
T  22768590 gtgcacatagagcagcataatgaagaaacagaggatgcacacttgcatcaagaagaggaaggtgcacaactgcaccatgatgaggaataccatgacccta 22768491  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||| ||||  ||||||| || | ||||||| |||||||| ||||||||| ||||| || | |||||||||||||||||| |||||||||    
T  22768490 atgaagatgaaacaaatgaagatgcgagatgggaatggatgactaccgaggttgaaagaataaacaccgagcaacaaaggcaaggtgttgaa 22768399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 52 - 238
Target Start/End: Original strand, 11218370 - 11218556
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||  ||||||||||   |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  11218370 tagaacacaataatgaagacatggaaggtgcagaattgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgccgg 11218469  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
     |||  ||||||||||  || ||||||||||||| |||| |||||||| ||||| |||||| || ||| || | | |||||||||||    
T  11218470 agaaacaaatgaaaatgtaatatgggcatggatgcatactgaggtcgagaggataagcacctagtaactaatgtaaggtgttgaatt 11218556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 236
Target Start/End: Original strand, 20168987 - 20169178
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||||||||||| |||||||||| | || | |||| ||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||| |     
T  20168987 gtgcacatagaacagcctaatgaagaaacagaggatgcacacttgcatcaagaagaggaaggtgcacaaatgcaccatgatgaggaataccatgacccta 20169086  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||  ||||  ||||||| || | |||||||||||||||| ||||||||| ||||| || | |||| ||||||||||||| |||||||||    
T  20169087 atgaaaatgaaacaaatgaagatgcgagatgggcatggatgactaccgaggttgaaagaataaacaccaagcaacaaaggcaaggtgttgaa 20169178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 18447012 - 18447156
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  ||||||| || ||||||||||||||||||||    |  | | | ||||| |||  ||||||| |||||||  | ||||||    
T  18447012 agaagaggaaggtgcacacttgcaccaagaggaggagcaccatgaccatgaaaccgaaggaaacaatgataatgaaagatggacatggatacaaaccgag 18447111  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || |||||||| |||||||||||||||||||| ||||||||||||    
T  18447112 gttgaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 18447156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 24856579 - 24856510
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  24856579 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 24856510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 18427542 - 18427574
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  18427542 catcaccttcagggacaacaagcaaagggatag 18427574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 10715894 - 10715863
Alignment:
Q  14 atcaccttcagggacaacaagcaaagggatag 45  Q
    ||||||||||||||||||||||||||||||||    
T  10715894 atcaccttcagggacaacaagcaaagggatag 10715863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 18010725 - 18010794
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | |  |||||  ||||||| |||||||||||||| ||||| ||||| ||||||    
T  18010725 aagatgggcatggatgcaaaatgaggtacaaaggataagcaccgagcaacagaggcaaggtgtcgaatta 18010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 25966523 - 25966592
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||| ||||||||| | || || || || ||||| ||||||||||||||||| || ||||||||||||    
T  25966523 aagatgagcatggatgcaaactgaagttgagaggataagcaccgagcaacaaagacaaggtgttgaatta 25966592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 25840 - 25655
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||  ||||||||||   |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||    
T  25840 tagaacacaataatgaagacatggaaggtgcaaaattgcaccaagaagatgaaggtgcacaactgcaccatgatgaggagcaccatgaccgtgatgccgg 25741  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaat 237  Q
     |||  |||||||||| ||||||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  25740 agaaacaaatgaaaatgcaagatgggcatggatgcatactgaggtcgagaggataagcaccgaacaacaaaggcaaggtgttgaat 25655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 21665 - 21847
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    ||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  || |||   ||||||||| |||||    
T  21665 ggaagatgcacatttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcactatgaccatgatgccggagaaaccaatgaaaatgcaaga 21764  T
Q  174 tgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||||||||| | |||||||||||   |||| ||||||||||    
T  21765 tgggcatggatgcataccgaggtcgagaggataagcaccgagcaacaaaggaaaggtgttgaattgtcgggactaaggaatga 21847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 256
Target Start/End: Original strand, 29263 - 29459
Alignment:
Q  45 gtgcgcatagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    |||| ||||||||||||||||||||| | |||||||||| ||  ||||||||||||||||||||||||| |||||               |||||||||     
T  29263 gtgcccatagaacagcataatgaagacgtggaaggtgcacacccgcaccaagaagaggaaggtgcacaattgcac---------------catgaccata 29347  T
Q  145 atgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatggg 244  Q
    |||| || |||  |||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  29348 atgacggagaaacaaatgaaaatgcaagatgggcatggatgcataccgaggtcgagaggataagcaccgagcaacaaaggcaaggtgttgaattaatggg 29447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 61 - 256
Target Start/End: Complemental strand, 22437 - 22242
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||  ||  |||    
T  22437 ataatgaaggcgaggaagatgcacatttgcaccaagaagaggaaggtgcacaattgtaccatgatgaggagcaccatgaccatgatgccggataaacaaa 22338  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    ||||||| ||||||||||||||||| ||||||||| ||| ||||| |||||| |||||| |||||| |||||||||||   |||| ||||||||||    
T  22337 tgaaaatgcaagatgggcatggatgcataccgaggccgagaggataagcaccaagcaactaaggcaaggtgttgaattgtcgggactaaggaatga 22242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 256
Target Start/End: Original strand, 90087 - 90249
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||  | ||   |||||||||| ||||||||||||||||| |||||||    
T  90087 aagaagaggaaggtgcacaattgcagcatgatgaggaacaccatgaccatgatgacagagacacaaatgaaaatgcaagatgggcatggatgcataccga 90186  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    || ||| ||||| | |||||||||||||||||| ||||||||||| | |||| ||||||||||    
T  90187 ggacgagaggataaacaccgagcaacaaaggcaaggtgttgaattgacgggactaaggaatga 90249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 238
Target Start/End: Original strand, 12251 - 12428
Alignment:
Q  61 ataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaa 160  Q
    |||||||||  | ||||| |||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||   ||  ||  |||    
T  12251 ataatgaaggcgaggaagatgcacatttgcaccaagaagaggaaggtgcacaattgtaccatgatgaggagcaccatgaccatgattccggataaacaaa 12350  T
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    ||||||| ||||||||||||||||| ||||||||| ||| ||||| |||||| |||||| ||||||  ||||||||||    
T  12351 tgaaaatgcaagatgggcatggatgcataccgaggccgagaggataagcaccaagcaactaaggcaatgtgttgaatt 12428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 19378 - 19242
Alignment:
Q  102 gaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaa 201  Q
    |||||||||||| ||||||||||||||||||| ||| ||| |||||  || |||  |||||||||| ||||||||||||||||| || |||||||||| |    
T  19378 gaaggtgcacaattgcaccatgatgaggagcatcattaccgtgatgccggagaaacaaatgaaaatgcaagatgggcatggatgcatgccgaggtcgaga 19279  T
Q  202 ggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    |||| |||||||||||||||||||| |||||||||||    
T  19278 ggataagcaccgagcaacaaaggcaaggtgttgaatt 19242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 253197 - 253154
Alignment:
Q  193 aggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||| |||||||| |||||||||||||||||||| |||||||||    
T  253197 aggttgaaaggataagcaccgagcaacaaaggcaaggtgttgaa 253154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 256
Target Start/End: Original strand, 942 - 1105
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatac-aagatgggcatggatgaataccg 192  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||   ||| ||||| | |||||||||||||||| ||||||    
T  942 aagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccatgatgccggagaaaccaataaaaatgcaaagatgggcatggatgcataccg 1041  T
Q  193 aggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    ||||||  ||||| |||| |||||||| |||||| |||||||||||   |||| ||||||||||    
T  1042 aggtcgggaggataagcatcgagcaactaaggcaaggtgttgaattgtcgggactaaggaatga 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 256
Target Start/End: Complemental strand, 3494 - 3305
Alignment:
Q  52 tagaacagcataatgaagaagcggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaagg 151  Q
    |||||||  |||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||               || |||||  ||    
T  3494 tagaacacgataatgaagacgaggaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatga---------------ccgtgatgccgg 3410  T
Q  152 tgaacaaaatgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataagg 251  Q
     |||  |||||||||| ||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||| ||||||||||| | |||| |||||    
T  3409 agaaacaaatgaaaatgcaagatgggcatggatgcataccgaggccgagaggataagcaccgagcaacaaaggcaaggtgttgaattgacgggactaagg 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 122169 - 122319
Alignment:
Q  88 tgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaa 187  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    | |||  ||| |||||| ||||||||||||||||| |    
T  122169 tgcaccaagaagaggaaggtgtacaattgcaccaggatgaggagcaccatgaccatgataccagagaaacaaacgaaaatgcaagatgggcatggatgca 122268  T
Q  188 taccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatt 238  Q
    |||||||| |||  |||| |||||| |||||| |||| | |||||||||||    
T  122269 taccgaggccgaggggataagcaccaagcaactaaggtaaggtgttgaatt 122319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 19681 - 19579
Alignment:
Q  74 ggaaggtgcaaacttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaaga 173  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||   ||||||||| |||||    
T  19681 ggaaggtgcacacttgcaccaagaagaggaaggtgcacaattgcaccatgatgaggagcaccatgaccatgatgccggagaaaccaatgaaaatgcaaga 19582  T
Q  174 tgg 176  Q
    |||    
T  19581 tgg 19579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 19580 - 19518
Alignment:
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    |||||| ||||| ||||||||||| |||||||| ||||||||||||  |||| ||||||||||    
T  19580 ggtcgagaggataagcaccgagcatcaaaggcaaggtgttgaattatcgggactaaggaatga 19518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 256
Target Start/End: Original strand, 132431 - 132592
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    |||| |||||||||||||| ||||||| ||  |||| ||||||||||||||    |  | | | ||||| |||  ||||||| |||||||| | ||||||    
T  132431 agaaaaggaaggtgcacaattgcaccaagaaaaggatcaccatgaccatgaaaccgaaggaaacaatgataatgaaagatggacatggatgcaaaccgag 132530  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaattaatgggaataaggaatga 256  Q
    || |||||||| ||||||||||||| |||||| ||||||||||||  |||| ||||||||||    
T  132531 gttgaaaggataagcaccgagcaactaaggcaaggtgttgaattatcgggactaaggaatga 132592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 6690 - 6834
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||  || | | |   |||||||  ||||| |||||||||| | || |||    
T  6690 agaagaggaaggtgcacacttgcaccatgatgaggagcaccatgaccatgatgccggaggaaactttgaaaatgaaagatcggcatggatgtaaactgag 6789  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||  ||| ||| |||||||||||| ||| ||| | ||||||||||    
T  6790 gtacaaatgataagcaccgagcaataaaagcaagatgttgaatta 6834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 1501 - 1570
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  1501 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 1570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 4985 - 5054
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  4985 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 5054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 11400 - 11477
Alignment:
Q  162 gaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||| ||||||||||||||||| | ||||||||  ||||||| |||||||| ||||||||||| ||||||||||||    
T  11400 gaaaatgcaagatgggcatggatgcaaaccgaggtacaaaggataagcaccgaacaacaaaggcaaggtgttgaatta 11477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 11349 - 11397
Alignment:
Q  99 gaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatg 147  Q
    ||||| ||||||||  |||||||||| |||||||| |||||||||||||    
T  11349 gaggacggtgcacacttgcaccatgaagaggagcatcatgaccatgatg 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 4926 - 4857
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||||| |||||||| | |||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  4926 aagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 4857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 5925 - 5893
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    ||||| |||||||||||||||||||||||||||    
T  5925 catcatcttcagggacaacaagcaaagggatag 5893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 24153 - 24210
Alignment:
Q  87 ttgcaccaagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatg 144  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  24153 ttgcaccaagaaggggaaggtgcacaattgcaccatgctgaggagcaccatgaccatg 24210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 10296 - 10365
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  10296 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 10365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 7905 - 7763
Alignment:
Q  94 aagaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccga 193  Q
    |||||| ||||| ||||||  |||||||||| ||||||||||||| |||||||   || | | | || ||  ||  ||||||| |||||||| | |||||    
T  7905 aagaagcggaagatgcacacttgcaccatgaggaggagcaccatggccatgatatcggaggaaacaacgatcatgaaagatggacatggatgcaaaccga 7806  T
Q  194 ggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    ||| |||||||| |||||||| ||||||||||| |||||||||    
T  7805 ggttgaaaggataagcaccgaacaacaaaggcaaggtgttgaa 7763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 2155 - 2224
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    ||||||| |||||||| | |||||||| |||||||| |||||||||||||||||||| | ||||||||||    
T  2155 aagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaacaaaggcaagatgttgaatta 2224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 12917 - 12986
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | ||||||||  ||||||| ||||||||||||||||| || ||||||||||||    
T  12917 aagatgggcatggatgcaaaccgaggtacaaaggataagcaccgagcaacaaagacaaggtgttgaatta 12986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 44238 - 44382
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  ||||||| |  ||| ||||||||||||||||    || | | | ||||| |||  || |||| |||||||  | ||||||    
T  44238 agaagaggaaggtgcacacttgcaccaagtggagaagcaccatgaccatgaaaccggaggaaacaatgataatgaaatatggacatggatataaaccgag 44337  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || |||||||| ||||||||||||||||||||  |||||||||||    
T  44338 gttgaaaggataagcaccgagcaacaaaggcaaagtgttgaatta 44382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 51627 - 51771
Alignment:
Q  95 agaagaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatgaaggtgaacaaaatgaaaatacaagatgggcatggatgaataccgag 194  Q
    ||||||||||||||||||  ||||||| |  ||| ||||||||||||||||    || | | | ||||| |||  || |||| |||||||  | ||||||    
T  51627 agaagaggaaggtgcacacttgcaccaagtggagaagcaccatgaccatgaaaccggaggaaacaatgataatgaaatatggacatggatataaaccgag 51726  T
Q  195 gtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    || |||||||| ||||||||||||||||||||  |||||||||||    
T  51727 gttgaaaggataagcaccgagcaacaaaggcaaagtgttgaatta 51771  T

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Target: scaffold0974 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 3 - 72
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||  | || |||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  3 aagatgggcatggatacaaactgaggtacaaaggataagcaccgagcaacaaaggcaaggtgttgaatta 72  T

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Target: scaffold0116 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 39075 - 39013
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgt 232  Q
    |||||||||||||||| | || |||||  ||||||| |||||||||||||||||||| |||||    
T  39075 aagatgggcatggatgcaaactgaggtacaaaggattagcaccgagcaacaaaggcaaggtgt 39013  T

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Target: scaffold1620 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 330 - 274
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggca 226  Q
    |||||||||||||||| | || |||||  ||||||| ||||||||||||||||||||    
T  330 aagatgggcatggatgcaaactgaggtacaaaggataagcaccgagcaacaaaggca 274  T

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Target: scaffold0150 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 21878 - 21846
Alignment:
Q  13 catcaccttcagggacaacaagcaaagggatag 45  Q
    |||||||||||||||||||||||||||||||||    
T  21878 catcaccttcagggacaacaagcaaagggatag 21846  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 32921 - 32847
Alignment:
Q  161 tgaaaatacaagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||  |||||||||||||||| | || |||||  ||||||| ||||||||||||| |||||| |||||||||    
T  32921 tgaaaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccgagcaac-aaggcaaggtgttgaa 32847  T

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Target: scaffold0231 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 21797 - 21863
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaa 236  Q
    |||||||||||||||| | || |||||  | ||||| |||||||| ||||||||||| |||||||||    
T  21797 aagatgggcatggatgcaaacggaggttcagaggataagcaccgaacaacaaaggcaaggtgttgaa 21863  T

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Target: scaffold1879 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1879
Description:

Target: scaffold1879; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 257 - 188
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||||||||||||| | |  |||||  ||||||| |||||||||||||| ||||| ||||| ||||||    
T  257 aagatgggcatggatgcaaaatgaggtacaaaggattagcaccgagcaacagaggcaaggtgtcgaatta 188  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 115526 - 115594
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||| ||||||||| | |||||||   ||||||| ||||||||||||| |||||| ||||||||||||    
T  115526 aagatgagcatggatgcaaaccgaggaacaaaggataagcaccgagcaac-aaggcaaggtgttgaatta 115594  T

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Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 119830 - 119898
Alignment:
Q  170 aagatgggcatggatgaataccgaggtcgaaaggatcagcaccgagcaacaaaggcagggtgttgaatta 239  Q
    |||||| ||||||||| | |||||||   ||||||| ||||||||||||| |||||| ||||||||||||    
T  119830 aagatgagcatggatgcaaaccgaggaacaaaggataagcaccgagcaac-aaggcaaggtgttgaatta 119898  T

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Target: scaffold0215 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 8391 - 8343
Alignment:
Q  99 gaggaaggtgcacaactgcaccatgatgaggagcaccatgaccatgatg 147  Q
    ||||||||||||||| |||||||  ||||||| |||||||||| |||||    
T  8391 gaggaaggtgcacaaatgcaccaaaatgaggaacaccatgaccctgatg 8343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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