View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8681_low_7 (Length: 307)
Name: NF8681_low_7
Description: NF8681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8681_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 5 - 285
Target Start/End: Original strand, 10420607 - 10420887
Alignment:
| Q |
5 |
atagtcgtagtattaacctctgatgaatcattataataatgaataatgttttgacatatacctgactaggagttcacccataacaagcagagatattttc |
104 |
Q |
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| T |
10420607 |
atagtcgcagtattaacctctgatgaatcattataataaagaataatgttttgacatatacctgactaggagttcactcataacaagcagcgatattttc |
10420706 |
T |
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| Q |
105 |
tttgatagaacatagatatttgttaatgttgaataagctaacagctgaaatatacgttactcttgctttgagttacattgtgtttgaatttgacacgaag |
204 |
Q |
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| T |
10420707 |
tttgatagaacatagatatttgttaatgttgaataagctaacagctgaaatatacgttactcttgctttgagttacattgtgtttgaatttgacacgaag |
10420806 |
T |
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| Q |
205 |
taggttatcaactacaccccgtgcatgtgtcatgtactgcatgcaaacgtataaaaaatccatatgtattacgtgtaggtt |
285 |
Q |
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| T |
10420807 |
taggttatcaactacaccccgtgcatgtgtcatgtaccgcatgcaaacgtataaaaaatccatatgtattacgtgtaggtt |
10420887 |
T |
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