View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8685_high_4 (Length: 271)

Name: NF8685_high_4
Description: NF8685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8685_high_4
NF8685_high_4
[»] chr3 (48 HSPs)
chr3 (50-189)||(39946133-39946276)
chr3 (1-54)||(48593151-48593204)
chr3 (2-54)||(29457850-29457902)
chr3 (14-54)||(55139195-55139235)
chr3 (1-47)||(10049761-10049807)
chr3 (1-54)||(379159-379212)
chr3 (1-50)||(3731469-3731517)
chr3 (1-54)||(5177851-5177904)
chr3 (1-54)||(6086987-6087040)
chr3 (1-54)||(8243768-8243821)
chr3 (1-54)||(9440214-9440267)
chr3 (1-54)||(10049677-10049730)
chr3 (1-54)||(22003882-22003935)
chr3 (1-54)||(22011399-22011452)
chr3 (1-54)||(28406476-28406529)
chr3 (1-54)||(28406553-28406606)
chr3 (13-54)||(48643690-48643731)
chr3 (1-54)||(54087407-54087460)
chr3 (2-54)||(40141960-40142012)
chr3 (1-47)||(6086910-6086956)
chr3 (13-47)||(8243703-8243737)
chr3 (1-47)||(9440137-9440183)
chr3 (1-47)||(25113358-25113404)
chr3 (1-47)||(26999114-26999160)
chr3 (1-54)||(335461-335514)
chr3 (13-54)||(2544545-2544586)
chr3 (1-54)||(12747783-12747836)
chr3 (1-54)||(14768107-14768160)
chr3 (1-54)||(18765344-18765397)
chr3 (1-54)||(19202336-19202389)
chr3 (13-54)||(19649600-19649641)
chr3 (1-54)||(19649665-19649718)
chr3 (13-54)||(19880873-19880914)
chr3 (1-54)||(21662895-21662948)
chr3 (1-54)||(26999030-26999083)
chr3 (1-54)||(28945665-28945718)
chr3 (2-47)||(29019828-29019873)
chr3 (1-54)||(33371946-33371999)
chr3 (1-54)||(33808396-33808448)
chr3 (1-54)||(40214986-40215039)
chr3 (1-54)||(48593228-48593281)
chr3 (1-54)||(49122953-49123006)
chr3 (1-54)||(53441993-53442046)
chr3 (10-46)||(2544455-2544491)
chr3 (3-47)||(9190121-9190165)
chr3 (10-54)||(39462515-39462559)
chr3 (10-54)||(44118269-44118313)
chr3 (2-54)||(52114110-52114162)
[»] chr7 (37 HSPs)
chr7 (1-54)||(16861521-16861574)
chr7 (3-54)||(32811389-32811440)
chr7 (1-54)||(1366604-1366657)
chr7 (1-54)||(4826847-4826900)
chr7 (2-54)||(29365707-29365759)
chr7 (2-54)||(36245462-36245514)
chr7 (3-54)||(31227578-31227629)
chr7 (8-50)||(19512747-19512789)
chr7 (2-48)||(26564013-26564059)
chr7 (1-54)||(27231843-27231896)
chr7 (1-54)||(28020010-28020063)
chr7 (13-54)||(29559523-29559564)
chr7 (13-54)||(41088873-41088914)
chr7 (10-54)||(13860303-13860347)
chr7 (3-54)||(28677403-28677454)
chr7 (10-48)||(28248449-28248487)
chr7 (1-54)||(2523856-2523909)
chr7 (1-54)||(5909557-5909610)
chr7 (1-54)||(7107716-7107769)
chr7 (1-54)||(8566167-8566220)
chr7 (1-54)||(10007662-10007715)
chr7 (1-54)||(11668101-11668154)
chr7 (1-54)||(12763238-12763291)
chr7 (1-54)||(20397824-20397877)
chr7 (1-54)||(23248754-23248807)
chr7 (1-54)||(27231919-27231972)
chr7 (1-54)||(28677326-28677379)
chr7 (1-54)||(29365630-29365683)
chr7 (1-54)||(30866254-30866307)
chr7 (1-54)||(30869272-30869325)
chr7 (1-54)||(35427745-35427798)
chr7 (1-54)||(39153296-39153349)
chr7 (5-54)||(42456993-42457042)
chr7 (3-47)||(3411425-3411469)
chr7 (2-54)||(4826772-4826824)
chr7 (10-54)||(40234784-40234828)
chr7 (22-54)||(46449808-46449840)
[»] chr2 (70 HSPs)
chr2 (1-54)||(12486078-12486131)
chr2 (1-54)||(4063357-4063410)
chr2 (1-54)||(15384512-15384565)
chr2 (1-54)||(20555267-20555320)
chr2 (13-54)||(22857825-22857866)
chr2 (1-54)||(45034483-45034536)
chr2 (1-54)||(45571115-45571168)
chr2 (1-54)||(45574782-45574835)
chr2 (1-54)||(45578449-45578502)
chr2 (1-54)||(45582116-45582169)
chr2 (1-54)||(45585783-45585836)
chr2 (1-54)||(45589450-45589503)
chr2 (1-54)||(45593117-45593170)
chr2 (1-54)||(45596784-45596837)
chr2 (1-54)||(45600451-45600504)
chr2 (1-54)||(45604118-45604171)
chr2 (1-54)||(45607785-45607838)
chr2 (1-54)||(45611452-45611505)
chr2 (1-54)||(45615119-45615172)
chr2 (2-54)||(3838428-3838480)
chr2 (3-54)||(4044586-4044637)
chr2 (3-45)||(3037734-3037776)
chr2 (1-54)||(7943525-7943579)
chr2 (1-54)||(3037811-3037864)
chr2 (1-54)||(6761474-6761527)
chr2 (1-54)||(7833291-7833344)
chr2 (13-54)||(9152465-9152506)
chr2 (1-54)||(16241353-16241406)
chr2 (13-54)||(25795324-25795365)
chr2 (1-54)||(25892030-25892083)
chr2 (1-54)||(40430752-40430805)
chr2 (1-54)||(44737368-44737421)
chr2 (1-54)||(45571039-45571092)
chr2 (1-54)||(45574706-45574759)
chr2 (1-54)||(45578373-45578426)
chr2 (1-54)||(45582040-45582093)
chr2 (1-54)||(45585707-45585760)
chr2 (1-54)||(45589374-45589427)
chr2 (1-54)||(45593041-45593094)
chr2 (1-54)||(45596708-45596761)
chr2 (1-54)||(45600375-45600428)
chr2 (1-54)||(45604042-45604095)
chr2 (1-54)||(45607709-45607762)
chr2 (1-54)||(45611376-45611429)
chr2 (1-54)||(45615043-45615096)
chr2 (2-54)||(18452579-18452631)
chr2 (16-52)||(37670342-37670378)
chr2 (2-54)||(39445005-39445057)
chr2 (2-54)||(42263556-42263608)
chr2 (3-54)||(37076231-37076282)
chr2 (3-54)||(41153197-41153248)
chr2 (1-47)||(6761558-6761604)
chr2 (10-48)||(9373486-9373524)
chr2 (10-48)||(11687567-11687605)
chr2 (1-47)||(16241276-16241322)
chr2 (1-47)||(20427094-20427140)
chr2 (10-48)||(44283625-44283663)
chr2 (1-54)||(5559372-5559425)
chr2 (1-46)||(7765888-7765933)
chr2 (5-54)||(11030278-11030327)
chr2 (1-54)||(12962791-12962844)
chr2 (13-54)||(27182096-27182137)
chr2 (21-54)||(27596735-27596768)
chr2 (13-54)||(27831638-27831679)
chr2 (1-54)||(29866091-29866144)
chr2 (5-54)||(36881546-36881595)
chr2 (1-54)||(45034407-45034460)
chr2 (3-47)||(25891955-25891999)
chr2 (12-52)||(38449026-38449066)
chr2 (3-47)||(40430677-40430721)
[»] chr8 (39 HSPs)
chr8 (1-54)||(6899505-6899558)
chr8 (1-54)||(12958861-12958914)
chr8 (1-54)||(22429620-22429673)
chr8 (1-54)||(44796427-44796480)
chr8 (2-54)||(10839773-10839825)
chr8 (10-54)||(43932135-43932179)
chr8 (1-54)||(2229156-2229209)
chr8 (1-54)||(7693119-7693172)
chr8 (1-54)||(22781891-22781944)
chr8 (1-54)||(32575260-32575313)
chr8 (1-54)||(36366034-36366087)
chr8 (10-54)||(10184637-10184681)
chr8 (6-54)||(35011297-35011345)
chr8 (3-50)||(15726849-15726896)
chr8 (1-47)||(25848060-25848106)
chr8 (1-47)||(30923930-30923976)
chr8 (1-47)||(41915687-41915733)
chr8 (1-47)||(43135137-43135183)
chr8 (1-47)||(45145958-45146004)
chr8 (1-54)||(2339299-2339352)
chr8 (1-54)||(12270142-12270195)
chr8 (2-54)||(13831446-13831499)
chr8 (1-54)||(24822809-24822862)
chr8 (1-54)||(24915255-24915308)
chr8 (1-54)||(29563667-29563720)
chr8 (1-54)||(30924007-30924060)
chr8 (1-54)||(34028392-34028445)
chr8 (1-54)||(41915603-41915656)
chr8 (1-54)||(44796351-44796404)
chr8 (3-54)||(4156391-4156443)
chr8 (3-51)||(8453683-8453731)
chr8 (10-54)||(9633099-9633143)
chr8 (16-48)||(21463135-21463167)
chr8 (10-54)||(34711099-34711143)
chr8 (10-54)||(38298587-38298631)
chr8 (3-47)||(40465249-40465293)
chr8 (3-47)||(40834229-40834273)
chr8 (18-54)||(43135070-43135106)
chr8 (1-53)||(45145878-45145930)
[»] chr5 (34 HSPs)
chr5 (1-54)||(1015165-1015218)
chr5 (1-54)||(15968396-15968449)
chr5 (1-54)||(22731268-22731321)
chr5 (1-54)||(36417133-36417186)
chr5 (3-54)||(38394439-38394490)
chr5 (1-54)||(25027703-25027756)
chr5 (1-54)||(29031046-29031099)
chr5 (1-54)||(31803044-31803097)
chr5 (1-54)||(37699866-37699919)
chr5 (3-47)||(26163972-26164016)
chr5 (1-48)||(7945846-7945893)
chr5 (3-54)||(18353294-18353345)
chr5 (3-54)||(29374181-29374232)
chr5 (1-47)||(1643437-1643483)
chr5 (1-47)||(2959332-2959378)
chr5 (1-47)||(2967801-2967847)
chr5 (10-48)||(6604414-6604452)
chr5 (1-47)||(25027787-25027833)
chr5 (1-51)||(27488435-27488485)
chr5 (1-47)||(29374263-29374309)
chr5 (1-47)||(37699789-37699835)
chr5 (1-47)||(42311819-42311865)
chr5 (1-54)||(1138227-1138280)
chr5 (1-54)||(7053657-7053710)
chr5 (1-54)||(13144889-13144942)
chr5 (1-54)||(15569417-15569470)
chr5 (1-54)||(21610387-21610440)
chr5 (1-54)||(27488356-27488409)
chr5 (1-54)||(41989573-41989626)
chr5 (3-47)||(2825953-2825997)
chr5 (10-54)||(3814057-3814101)
chr5 (10-54)||(6499999-6500043)
chr5 (10-54)||(11142449-11142493)
chr5 (10-54)||(35349499-35349543)
[»] chr4 (56 HSPs)
chr4 (1-54)||(20459250-20459303)
chr4 (1-54)||(43020841-43020894)
chr4 (1-54)||(47866121-47866174)
chr4 (1-54)||(53225730-53225783)
chr4 (5-51)||(16412247-16412293)
chr4 (1-54)||(2643617-2643670)
chr4 (13-54)||(4698644-4698685)
chr4 (1-54)||(18135399-18135452)
chr4 (1-54)||(20745341-20745394)
chr4 (1-54)||(31227280-31227333)
chr4 (1-54)||(31854465-31854518)
chr4 (1-54)||(38687997-38688050)
chr4 (13-54)||(39732022-39732063)
chr4 (1-54)||(40780259-40780312)
chr4 (1-54)||(42169129-42169182)
chr4 (1-54)||(48361061-48361114)
chr4 (1-54)||(53621414-53621467)
chr4 (1-54)||(55190676-55190729)
chr4 (2-54)||(2411926-2411978)
chr4 (2-54)||(30191906-30191958)
chr4 (3-54)||(4698709-4698760)
chr4 (1-48)||(49122612-49122659)
chr4 (16-54)||(1140889-1140927)
chr4 (1-47)||(4758786-4758832)
chr4 (16-54)||(15170969-15171007)
chr4 (1-47)||(20688509-20688555)
chr4 (10-48)||(22210807-22210845)
chr4 (1-47)||(32517779-32517825)
chr4 (1-47)||(53621337-53621383)
chr4 (1-54)||(2279533-2279586)
chr4 (5-54)||(3043877-3043926)
chr4 (1-54)||(4758863-4758916)
chr4 (1-54)||(18430341-18430394)
chr4 (1-54)||(20459326-20459379)
chr4 (1-54)||(23125655-23125708)
chr4 (5-54)||(26066382-26066431)
chr4 (5-54)||(34226400-34226449)
chr4 (1-54)||(36099496-36099549)
chr4 (1-54)||(36132721-36132774)
chr4 (13-54)||(36866874-36866915)
chr4 (1-54)||(39877412-39877465)
chr4 (1-54)||(41116571-41116624)
chr4 (1-54)||(42804265-42804318)
chr4 (1-54)||(42804341-42804394)
chr4 (1-54)||(43020765-43020818)
chr4 (5-54)||(43117940-43117989)
chr4 (1-54)||(44111831-44111884)
chr4 (1-54)||(47866045-47866098)
chr4 (5-54)||(54611987-54612036)
chr4 (1-54)||(55190752-55190805)
chr4 (2-54)||(19485582-19485634)
chr4 (10-54)||(24100777-24100821)
chr4 (10-54)||(24100890-24100934)
chr4 (2-54)||(27006515-27006567)
chr4 (3-51)||(42670853-42670901)
chr4 (2-54)||(48361138-48361190)
[»] chr1 (35 HSPs)
chr1 (1-54)||(47678265-47678318)
chr1 (10-54)||(25021249-25021293)
chr1 (1-51)||(29892219-29892269)
chr1 (1-54)||(9302005-9302058)
chr1 (1-54)||(9548681-9548734)
chr1 (1-54)||(14281599-14281652)
chr1 (13-54)||(25021317-25021358)
chr1 (1-54)||(26760182-26760235)
chr1 (1-54)||(26924299-26924352)
chr1 (1-54)||(28359157-28359210)
chr1 (1-54)||(28989281-28989334)
chr1 (1-54)||(34662767-34662820)
chr1 (1-54)||(38040362-38040415)
chr1 (1-54)||(38830492-38830545)
chr1 (1-54)||(43929355-43929408)
chr1 (1-54)||(49944842-49944895)
chr1 (1-54)||(50155384-50155437)
chr1 (3-51)||(47844622-47844670)
chr1 (1-47)||(2352402-2352448)
chr1 (1-47)||(14281683-14281729)
chr1 (1-47)||(23398173-23398219)
chr1 (1-47)||(26733794-26733840)
chr1 (1-47)||(33325426-33325472)
chr1 (1-54)||(2961190-2961243)
chr1 (1-54)||(10380476-10380529)
chr1 (1-54)||(23398089-23398142)
chr1 (1-54)||(27422993-27423046)
chr1 (1-54)||(29312448-29312501)
chr1 (1-54)||(34332562-34332615)
chr1 (1-54)||(38738017-38738070)
chr1 (1-54)||(43929431-43929484)
chr1 (2-54)||(7375555-7375607)
chr1 (1-53)||(29256685-29256737)
chr1 (6-54)||(34332490-34332538)
chr1 (10-54)||(45848957-45849001)
[»] chr6 (23 HSPs)
chr6 (2-54)||(1158331-1158383)
chr6 (1-54)||(2943328-2943381)
chr6 (1-54)||(14931267-14931320)
chr6 (1-54)||(34639126-34639179)
chr6 (2-54)||(6801637-6801689)
chr6 (2-46)||(28630847-28630891)
chr6 (1-48)||(22880927-22880974)
chr6 (1-48)||(22898862-22898909)
chr6 (11-54)||(33127872-33127915)
chr6 (1-47)||(885611-885657)
chr6 (13-47)||(14931346-14931380)
chr6 (1-47)||(24949640-24949686)
chr6 (1-54)||(390891-390944)
chr6 (10-47)||(1301934-1301971)
chr6 (1-54)||(2810164-2810217)
chr6 (13-54)||(5483947-5483988)
chr6 (1-54)||(7405453-7405506)
chr6 (2-47)||(8558924-8558969)
chr6 (1-54)||(24949717-24949770)
chr6 (1-54)||(27909061-27909114)
chr6 (10-54)||(1836978-1837022)
chr6 (10-54)||(9343138-9343182)
chr6 (2-54)||(30686554-30686606)
[»] scaffold0002 (2 HSPs)
scaffold0002 (16-54)||(423334-423372)
scaffold0002 (2-54)||(492391-492443)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-54)||(29253-29306)
[»] scaffold2107 (2 HSPs)
scaffold2107 (2-54)||(453-505)
scaffold2107 (1-47)||(536-582)
[»] scaffold0027 (1 HSPs)
scaffold0027 (10-54)||(5500-5544)
[»] scaffold0024 (2 HSPs)
scaffold0024 (3-54)||(7210-7261)
scaffold0024 (1-54)||(35963-36016)
[»] scaffold0023 (1 HSPs)
scaffold0023 (11-54)||(112909-112952)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-54)||(1618-1671)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-54)||(77354-77407)


Alignment Details
Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 39946276 - 39946133
Alignment:
Q  50 atgtaaacctttatgagactttttgatataacttataaaacaacttaattatgattt----gtaagtggtttttagcttattttctaagtttatcaagat 145  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    |||||| ||||||||||||||||||||||||||||||||    
T  39946276 atgtaaacctttatgagactgtttgatataacttataaaacaacttaattatgatatttctgtaagttgtttttagcttattttctaagtttatcaagat 39946177  T
Q  146 aagtaatagaaacaacttataccttacataaaaatggttgtcta 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39946176 aagtaatagaaacaacttataccttacataaaaatggttgtcta 39946133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48593151 - 48593204
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  48593151 ggtcctatacataagaaacaagtgactttttagatacattgaataattgatgta 48593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 29457850 - 29457902
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  29457850 gtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 29457902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 55139195 - 55139235
Alignment:
Q  14 agaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  55139195 agaaacaattgactttttagatacattgaataatttatgta 55139235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10049807 - 10049761
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||||||||||||||||||||||||||||||    
T  10049807 ggtcctatttacaagagacaattgactttttagatacattgaataat 10049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 379212 - 379159
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| | | ||||||||||||||||||||||||||| |||||    
T  379212 ggtcctatttataagagaaagttgactttttagatacattgaataatttatgta 379159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3731517 - 3731469
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattga 50  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  3731517 ggtcttatatataa-aaacaattgacattttagatacattgaataattga 3731469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5177904 - 5177851
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  5177904 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 5177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6087040 - 6086987
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  6087040 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 6086987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8243821 - 8243768
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  8243821 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 8243768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9440267 - 9440214
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  9440267 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 9440214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10049677 - 10049730
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  10049677 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 10049730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22003935 - 22003882
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||| | | ||||||||||||||||||||||||||||| |||||    
T  22003935 ggtcctatttataacagaaaattgactttttagatacattgaataatttatgta 22003882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22011452 - 22011399
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||| | | ||||||||||||||||||||||||||||| |||||    
T  22011452 ggtcctatttataacagaaaattgactttttagatacattgaataatttatgta 22011399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28406476 - 28406529
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||||||||||||||| | |||||||||| |||||    
T  28406476 ggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgta 28406529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28406606 - 28406553
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||||||||||||| | |||||||||||| |||||    
T  28406606 ggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 48643731 - 48643690
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  48643731 aagaaacaattgactttttagattcattgaataattaatgta 48643690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54087407 - 54087460
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| |||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  54087407 ggtcttatatataagaaacaatttacttttttgattcattgaatagttgatgta 54087460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 40142012 - 40141960
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  40142012 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 40141960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6086910 - 6086956
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  6086910 ggtcctatttacaagagacagttgactttttagatacattgaataat 6086956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 8243703 - 8243737
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataat 47  Q
    |||| ||||||||||||||||||||||||||||||    
T  8243703 aagagacaattgactttttagatacattgaataat 8243737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9440137 - 9440183
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  9440137 ggtcctatttacaagagacagttgactttttagatacattgaataat 9440183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25113358 - 25113404
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| ||||||| | | ||||||||||||||||||||||||||    
T  25113358 ggtcctatttataagagaaagttgactttttagatacattgaataat 25113404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26999160 - 26999114
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  26999160 ggtcctatttacaagagacatttgactttttagatacattgaataat 26999114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 335514 - 335461
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || || |||||||| |||||||||||||||| ||||||| |||||    
T  335514 ggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgta 335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 2544586 - 2544545
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||| |||| |||||||    
T  2544586 aagaaacaattgactttttagattcattgtataagtgatgta 2544545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12747836 - 12747783
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||||| ||||||||| ||| || |||||||||||    
T  12747836 ggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgta 12747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14768107 - 14768160
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  14768107 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 14768160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18765397 - 18765344
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| ||||||||||| |||| ||||||| |||||    
T  18765397 ggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgta 18765344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19202389 - 19202336
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || || |||||||| |||||||||||||||| ||||||| |||||    
T  19202389 ggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgta 19202336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19649600 - 19649641
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  19649600 aagaaacatttgacttttttgattcattgaataattgatgta 19649641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19649718 - 19649665
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||||||| |||| ||||||||| |||||| |||||||||||    
T  19649718 ggtcctatttacaagaaacatttgattttttagattcattgagtaattgatgta 19649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19880873 - 19880914
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  19880873 aagaaacaattgacgttttagatacattaaataatttatgta 19880914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21662895 - 21662948
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||||||||||||| |||||| ||||| |||||    
T  21662895 ggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 21662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26999030 - 26999083
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  26999030 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 26999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28945665 - 28945718
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  28945665 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 28945718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 29019873 - 29019828
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    ||||||| || |||| | ||||||||||||||||||||||||||||    
T  29019873 gtcctatttacaagagaaaattgactttttagatacattgaataat 29019828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33371999 - 33371946
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||| |||| | ||||| ||| ||||||||| ||||||||    
T  33371999 ggtcctatatataagaaataatttatttttttgattcattgaatagttgatgta 33371946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33808448 - 33808396
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| ||||||||||||| ||  |||||||||||||||||    
T  33808448 ggtcctatttataagaaa-aattgactttttaaattaattgaataattgatgta 33808396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40215039 - 40214986
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||| | |||||||||||||||| ||||||| |||||    
T  40215039 ggtcctatttataagagacaagttactttttagatacattaaataatttatgta 40214986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48593281 - 48593228
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||| ||||||||| | | ||||||||| |||||||||||| |||||    
T  48593281 ggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgta 48593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49122953 - 49123006
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  49122953 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 49123006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53442046 - 53441993
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | ||||||||||| || |||||||||||| |||||    
T  53442046 ggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgta 53441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 2544455 - 2544491
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataa 46  Q
    |||||||||||||||||||||||| | ||||||||||    
T  2544455 tataagaaacaattgactttttaggttcattgaataa 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 9190165 - 9190121
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| ||||||| | | ||||||||||||||||||||||||||    
T  9190165 tcctatttataagagaaagttgactttttagatacattgaataat 9190121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 39462559 - 39462515
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| |||||| ||||| |||||||||||||||| |||||    
T  39462559 tataagaaataattgaattttttgatacattgaataatttatgta 39462515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 44118313 - 44118269
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||| ||||  |||||| |||||    
T  44118313 tataagaaacaattgactttttagattcattatataattaatgta 44118269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 52114162 - 52114110
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  52114162 gtcctatttacaagagacaatttactttttagatacattaaataatttatgta 52114110  T

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Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16861521 - 16861574
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16861521 ggtcttatatataaaaaacaattgactttttagattcattgaataattgatgta 16861574  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 32811389 - 32811440
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  32811389 tcctatatataagaaacaatttacttttttgattcattgaataattgatgta 32811440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1366604 - 1366657
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  1366604 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 1366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4826900 - 4826847
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  4826900 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 4826847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 29365759 - 29365707
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||| |||||||||||||||| |||||| ||||| |||||    
T  29365759 gtcctatatataagaaaaaattgactttttagattcattgagtaattaatgta 29365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 36245514 - 36245462
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||| |||||||||||||||| |||||| |||||||||||    
T  36245514 gtcctatttataagaaaaaattgactttttagattcattgagtaattgatgta 36245462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 31227629 - 31227578
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  31227629 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 31227578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 19512747 - 19512789
Alignment:
Q  8 tatataagaaacaattgactttttagatacattgaataattga 50  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  19512747 tatataagaaacaattgactttttaaattcattgaataattga 19512789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 26564059 - 26564013
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||| || |||||||||||||||||| |||||||||||||||||    
T  26564059 gtcctatttacaagaaacaattgacttttcagatacattgaataatt 26564013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27231843 - 27231896
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  27231843 ggtcctatacataagaaacaatttacttttttgattcattgaatagttgatgta 27231896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28020010 - 28020063
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  28020010 ggtcctatttataagaaacaatttacttttttgattcattgaatagttgatgta 28020063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 29559564 - 29559523
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  29559564 aagaaacaattgactttttagattcattgaataattaatgta 29559523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 41088873 - 41088914
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  41088873 aagaaacaattgactttttagattcattgaataattaatgta 41088914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 13860347 - 13860303
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||| ||||| |||||| |||||    
T  13860347 tataagaaacaattgactttttagattcattgtataattaatgta 13860303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 28677454 - 28677403
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| ||||||||| ||||||||||||||||  ||||| |||||||||||    
T  28677454 tcctatttataagaaaaaattgactttttagatttattgagtaattgatgta 28677403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 28248449 - 28248487
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  28248449 tataagaaacaattgacattttagattcattgaataatt 28248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2523909 - 2523856
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||||||||||||| |||||| ||||| |||||    
T  2523909 ggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 2523856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5909610 - 5909557
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  5909610 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 5909557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7107769 - 7107716
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| | | ||||||||||||||||||||||||||| |||||    
T  7107769 ggtcctatttacaagagaaagttgactttttagatacattgaataatttatgta 7107716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8566220 - 8566167
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||| ||||||||| |||||| |||||||||||    
T  8566220 ggtcctatttataagaaaaatttgattttttagattcattgagtaattgatgta 8566167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10007715 - 10007662
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||||||||||||| ||||| |||||| |||||    
T  10007715 ggtcctatttataagaaaaagttgactttttagattcattgtataattaatgta 10007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11668154 - 11668101
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | ||||||||||| || |||||| |||||||||||    
T  11668154 ggtcctatttataagaaaaatttgactttttacattcattgattaattgatgta 11668101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12763238 - 12763291
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  12763238 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 12763291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20397824 - 20397877
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||||| | |||||||||||||| ||||||| |||||    
T  20397824 ggtcctatttataagagacaatttaatttttagatacattaaataatttatgta 20397877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23248807 - 23248754
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  23248807 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 23248754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27231972 - 27231919
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  27231972 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 27231919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28677326 - 28677379
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| |||||||||| ||| ||||| |||| |||||||    
T  28677326 ggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgta 28677379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29365630 - 29365683
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| ||||||||||  |||||||| |||| |||||||    
T  29365630 ggtcctatttataagaaacatttgacttttttaatacattgcataaatgatgta 29365683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30866254 - 30866307
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  30866254 ggtcctatttaaaagagacaatttactttttagatacattaaataatttatgta 30866307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30869325 - 30869272
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||||||||   |||||||||||||| |||||| |||||||||||    
T  30869325 ggtcctatttataagaaaattttgactttttagattcattgagtaattgatgta 30869272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35427798 - 35427745
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  35427798 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 35427745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39153296 - 39153349
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| |||||||||| ||| ||||| |||| |||||||    
T  39153296 ggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgta 39153349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 42456993 - 42457042
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||| ||| ||||||| ||| ||||||||| ||||||||    
T  42456993 ctatatataagaaacgatttacttttttgattcattgaatagttgatgta 42457042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 3411469 - 3411425
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| ||||||| | | ||||||||||||||||||||||||||    
T  3411469 tcctatttataagagaaatttgactttttagatacattgaataat 3411425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 4826772 - 4826824
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  4826772 gtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 4826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 40234784 - 40234828
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||| |||||  ||| |||||||    
T  40234784 tataagaaacaattgactttttagattcattgtgtaactgatgta 40234828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 46449808 - 46449840
Alignment:
Q  22 ttgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||||||| |||||    
T  46449808 ttgactttttagatacattgaataatttatgta 46449840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12486131 - 12486078
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  12486131 ggtcctatttacaagaaacaattgactttttagattcattgaataattgatgta 12486078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4063410 - 4063357
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  4063410 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 4063357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15384565 - 15384512
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  15384565 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 15384512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20555267 - 20555320
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  20555267 ggtcctatttataagaaaaaattaattttttagatacattgaataattgatgta 20555320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 22857825 - 22857866
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  22857825 aagaaacaattgactttttagatacattgaataatttatgta 22857866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45034536 - 45034483
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45034536 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45034483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45571168 - 45571115
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45571168 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45571115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45574835 - 45574782
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45574835 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45574782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45578502 - 45578449
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45578502 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45582169 - 45582116
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45582169 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45582116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45585836 - 45585783
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45585836 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45585783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45589503 - 45589450
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45589503 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45589450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45593170 - 45593117
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45593170 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45593117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45596837 - 45596784
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45596837 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45596784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45600504 - 45600451
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45600504 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45600451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45604171 - 45604118
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45604171 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45604118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45607838 - 45607785
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45607838 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45607785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45611505 - 45611452
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45611505 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45611452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45615172 - 45615119
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  45615172 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 45615119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 3838428 - 3838480
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  3838428 gtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 3838480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 4044586 - 4044637
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  4044586 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 4044637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 3037734 - 3037776
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaata 45  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  3037734 tcctttatataagaaacaaatgactttttagatacattgaata 3037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7943579 - 7943525
Alignment:
Q  1 ggtcctatatataagaaacaa-ttgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| || |||||||||||||| ||||||||||||||||||    
T  7943579 ggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgta 7943525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3037864 - 3037811
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||| |||||    
T  3037864 ggtcctatatacaagaaacaaatgattttttagattcattgaataatttatgta 3037811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6761474 - 6761527
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  6761474 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 6761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7833291 - 7833344
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| |||||||||||||||||  | ||||||||| ||||||||||||||||||    
T  7833291 ggtcttatatataagaaacaatcaattttttagattcattgaataattgatgta 7833344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 9152506 - 9152465
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  9152506 aagaaacaattgactttttagattcattgagtaattgatgta 9152465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16241406 - 16241353
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  16241406 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 16241353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 25795365 - 25795324
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  25795365 aagaaacaattgactttttagattcattgaataattaatgta 25795324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25892083 - 25892030
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  25892083 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 25892030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40430805 - 40430752
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||||| |||||||||||||||| ||||||| |||||    
T  40430805 ggtcctatttataagagacaatttactttttagatacattaaataatttatgta 40430752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44737421 - 44737368
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  44737421 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 44737368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45571039 - 45571092
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45571039 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45571092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45574706 - 45574759
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45574706 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45578373 - 45578426
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45578373 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45578426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45582040 - 45582093
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45582040 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45585707 - 45585760
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45585707 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45585760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45589374 - 45589427
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45589374 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45589427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45593041 - 45593094
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45593041 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45593094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45596708 - 45596761
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45596708 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45596761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45600375 - 45600428
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45600375 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45604042 - 45604095
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45604042 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45607709 - 45607762
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45607709 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45607762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45611376 - 45611429
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45611376 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45611429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45615043 - 45615096
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45615043 ggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45615096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 18452579 - 18452631
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  18452579 gtcctatttacaagagacaatttactttttagatacattgaataatttatgta 18452631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 37670342 - 37670378
Alignment:
Q  16 aaacaattgactttttagatacattgaataattgatg 52  Q
    ||||||||||||||||||||| |||||||||||||||    
T  37670342 aaacaattgactttttagatatattgaataattgatg 37670378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 39445005 - 39445057
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||| | ||||||||| |||| |||||| |||||||||||    
T  39445005 gtcctatatataagaaaaatttgacttttaagattcattgagtaattgatgta 39445057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 42263608 - 42263556
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  42263608 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 42263556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 37076282 - 37076231
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| ||||||||||||| ||||||||||||  |||| ||||||||||||    
T  37076282 tcctatttataagaaacaatcgactttttagatttattggataattgatgta 37076231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 41153248 - 41153197
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| ||||||||| | |||||||||||||| |||||| |||||||||||    
T  41153248 tcctatttataagaaaaagttgactttttagattcattgagtaattgatgta 41153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6761604 - 6761558
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  6761604 ggtcctatttacaagagacagttgactttttagatacattgaataat 6761558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 9373524 - 9373486
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  9373524 tataagaaacaattgactttttaaattcattgaataatt 9373486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 11687605 - 11687567
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  11687605 tataagaaacaattgactttttagatttattgaataatt 11687567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16241276 - 16241322
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  16241276 ggtcctatttacaagagacagttgactttttagatacattgaataat 16241322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20427140 - 20427094
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||| ||| ||||||| | ||||||||||||||||||||||||||||    
T  20427140 ggtcttatttataagagaaaattgactttttagatacattgaataat 20427094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 44283663 - 44283625
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  44283663 tataagaaataattgactttttagattcattgaataatt 44283625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5559372 - 5559425
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||| ||||||||| | |||||||||||||| |||||| |||||||||||    
T  5559372 ggtcatatttataagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7765933 - 7765888
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataa 46  Q
    |||||||| ||||||| |||||| |||||||||||||||| |||||    
T  7765933 ggtcctatttataagagacaatttactttttagatacattaaataa 7765888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11030327 - 11030278
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||||||| |||| ||||||||||| |||||| |||||||||||    
T  11030327 ctatttataagaaaaaattaactttttagattcattgagtaattgatgta 11030278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12962844 - 12962791
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| |||||||||| ||| ||||| |||| |||||||    
T  12962844 ggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgta 12962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 27182096 - 27182137
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||| |||| ||||||||||||||||| |||||    
T  27182096 aagaaacaattgatttttcagatacattgaataatttatgta 27182137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 27596768 - 27596735
Alignment:
Q  21 attgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||||| |||||    
T  27596768 attgactttttagatacattgaataatttatgta 27596735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 27831638 - 27831679
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||| |||| ||||||||||||||||| |||||    
T  27831638 aagaaacaattgatttttcagatacattgaataatttatgta 27831679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29866091 - 29866144
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  29866091 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 29866144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 36881546 - 36881595
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||| |||||    
T  36881546 ctatttataagaaaaatttgactttttagatacattgagtaattaatgta 36881595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45034407 - 45034460
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  45034407 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 45034460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 25891955 - 25891999
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  25891955 tcctatttataagagacagttgactttttagataaattgaataat 25891999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 38449066 - 38449026
Alignment:
Q  12 taagaaacaattgactttttagatacattgaataattgatg 52  Q
    |||||||||||||||||||||| | |||| |||||||||||    
T  38449066 taagaaacaattgactttttaggttcattaaataattgatg 38449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 40430677 - 40430721
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| ||||||| | ||||||||||||||||||||| ||||||    
T  40430677 tcctatttataagagaaaattgactttttagatacattcaataat 40430721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6899558 - 6899505
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  6899558 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 6899505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12958914 - 12958861
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  12958914 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 12958861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22429673 - 22429620
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  22429673 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 22429620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44796480 - 44796427
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  44796480 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 44796427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 10839773 - 10839825
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||| |||||    
T  10839773 gtcctatttataagaaaaaattgactttttagattcattgaataattaatgta 10839825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 43932179 - 43932135
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||| |||||||||||| |||||    
T  43932179 tataagaaacaattgactttttagattcattgaataattaatgta 43932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2229209 - 2229156
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  2229209 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 2229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7693172 - 7693119
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||||||||||||||| |||||| ||||| |||||    
T  7693172 ggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgta 7693119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22781891 - 22781944
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  22781891 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 22781944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32575313 - 32575260
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||| |||||||| |||||||  || ||||||||||||||||||    
T  32575313 ggtcctatatataaaaaacaatttactttttttattcattgaataattgatgta 32575260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36366034 - 36366087
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||| ||||||||    
T  36366034 ggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgta 36366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 10184681 - 10184637
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  10184681 tataagaaaaaatcgactttttagattcattgaataattgatgta 10184637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 35011345 - 35011297
Alignment:
Q  6 tatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  35011345 tatatataagaaacaatttacttttttgattcattgaatagttgatgta 35011297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15726896 - 15726849
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattga 50  Q
    |||||| ||||||||| |||||||||||||||| |||||| |||||||    
T  15726896 tcctatttataagaaaaaattgactttttagattcattgagtaattga 15726849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25848106 - 25848060
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  25848106 ggtcctatttacaagagacagttgactttttagatacattgaataat 25848060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30923930 - 30923976
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  30923930 ggtcctatttacaagagacagttgactttttagatacattgaataat 30923976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41915733 - 41915687
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| | ||||||||||||||||||||||||||||    
T  41915733 ggtcctatttacaagagaaaattgactttttagatacattgaataat 41915687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43135183 - 43135137
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  43135183 ggtcctatttacaagagacagttgactttttagatacattgaataat 43135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45146004 - 45145958
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| | ||||||||||||||||||||||||||||    
T  45146004 ggtcctatttacaagagaaaattgactttttagatacattgaataat 45145958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2339299 - 2339352
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  2339299 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 2339352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12270195 - 12270142
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  12270195 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 12270142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 13831499 - 13831446
Alignment:
Q  2 gtcctatatataagaaacaa-ttgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||| || |||||||||||||| |||| |||||||||||||    
T  13831499 gtcctatttataagaaaaaaattgactttttagattcattaaataattgatgta 13831446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24822862 - 24822809
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| ||||||||||||||||  |||| |||||| |||||    
T  24822862 ggtcctatttataagaaaaaattgactttttagatttattgtataattaatgta 24822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24915308 - 24915255
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||| |||| |||| ||||||||||| |||| |||||||||||||    
T  24915308 ggtcctatttatatgaaaaaattaactttttagattcattaaataattgatgta 24915255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29563667 - 29563720
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  29563667 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 29563720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30924060 - 30924007
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||| | |||||| |||||||||||||||| ||||||| |||||    
T  30924060 ggtcctatttataaaagacaatttactttttagatacattaaataatttatgta 30924007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34028392 - 34028445
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||| ||||||| |||||||||||||||| ||||||| |||||    
T  34028392 ggtcctatttacaagtaacaatttactttttagatacattaaataatttatgta 34028445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41915603 - 41915656
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||||| | |||||||||||||| ||||||| |||||    
T  41915603 ggtcctatttataagagacaatttaatttttagatacattaaataatttatgta 41915656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44796351 - 44796404
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  44796351 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 44796404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 4156391 - 4156443
Alignment:
Q  3 tcctatatataagaaacaa-ttgactttttagatacattgaataattgatgta 54  Q
    |||||| ||||||||| || ||||||| ||||||||||||| |||||||||||    
T  4156391 tcctatttataagaaaaaaattgacttgttagatacattgagtaattgatgta 4156443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 8453731 - 8453683
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgat 51  Q
    |||||| ||||||||| | |||| |||||||||||||||| ||||||||    
T  8453731 tcctatttataagaaaaatttgattttttagatacattgagtaattgat 8453683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 9633099 - 9633143
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||| |||||||| ||||| |||||| |||||    
T  9633099 tataagaaacaattgacgttttagattcattgtataattaatgta 9633143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 21463135 - 21463167
Alignment:
Q  16 aaacaattgactttttagatacattgaataatt 48  Q
    ||||||||||||||||||||| |||||||||||    
T  21463135 aaacaattgactttttagatatattgaataatt 21463167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34711099 - 34711143
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||| ||| |||||||||||||||| |||||| |||||||||||    
T  34711099 tataaaaaaaaattgactttttagattcattgagtaattgatgta 34711143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 38298631 - 38298587
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||| ||||||| | |||||||||||| |||||    
T  38298631 tataagaaacaattgattttttaggttcattgaataattaatgta 38298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 40465249 - 40465293
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| || |||| | ||||||||||||||||||||||||||||    
T  40465249 tcctatttacaagagaaaattgactttttagatacattgaataat 40465293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 40834273 - 40834229
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| ||||||| | ||||| ||||||||||||||||||||||    
T  40834273 tcctatttataagagaaaattgtctttttagatacattgaataat 40834229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 43135070 - 43135106
Alignment:
Q  18 acaattgactttttagatacattgaataattgatgta 54  Q
    |||||| |||||||||||||||||||||||| |||||    
T  43135070 acaatttactttttagatacattgaataatttatgta 43135106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45145878 - 45145930
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgt 53  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| ||||    
T  45145878 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgt 45145930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1015165 - 1015218
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  1015165 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 1015218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15968449 - 15968396
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  15968449 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 15968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22731268 - 22731321
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  22731268 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 22731321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36417186 - 36417133
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||| |||||    
T  36417186 ggtcctatttataagaaacaatttactttttagatacattaaataatttatgta 36417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 38394439 - 38394490
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||| |||||    
T  38394439 tcctatttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25027703 - 25027756
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  25027703 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 25027756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29031046 - 29031099
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| |||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  29031046 ggtcttatatataagaaacaatttacttttttgattcattgaatagttgatgta 29031099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31803097 - 31803044
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  31803097 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 31803044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37699919 - 37699866
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  37699919 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 37699866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 26163972 - 26164016
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||    
T  26163972 tcctatttataagaaacaattgactttttagatttattgaataat 26164016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7945846 - 7945893
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataatt 48  Q
    |||||||| || ||||||||||| |||||||||||||||| |||||||    
T  7945846 ggtcctatttacaagaaacaatttactttttagatacattaaataatt 7945893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 18353345 - 18353294
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  18353345 tcctatttacaagaaacaatttactttttagatacattaaataatttatgta 18353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 29374181 - 29374232
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  29374181 tcctatttacaagagacaatttactttttagatacattgaataatttatgta 29374232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1643483 - 1643437
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| ||||||| ||| ||||||||||||||||||| ||||||    
T  1643483 ggtcctatttataagagacagttgactttttagatacattcaataat 1643437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2959378 - 2959332
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||    
T  2959378 ggtcctatttacaagaaacaatttactttttagatacattaaataat 2959332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2967847 - 2967801
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||    
T  2967847 ggtcctatttacaagaaacaatttactttttagatacattaaataat 2967801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 6604452 - 6604414
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  6604452 tataagaaacaattgactttttaaattcattgaataatt 6604414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25027833 - 25027787
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  25027833 ggtcctatttacaagagacagttgactttttagatacattgaataat 25027787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27488485 - 27488435
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgat 51  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||| |||||    
T  27488485 ggtcctatatataagaaacaatttacttttttgattcattcaatagttgat 27488435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29374309 - 29374263
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  29374309 ggtcctatttacaagagacagttgactttttagatacattgaataat 29374263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37699789 - 37699835
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  37699789 ggtcctatttacaagagacagttgactttttagatacattgaataat 37699835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42311819 - 42311865
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||||| ||||||||||||| ||||||||||||||    
T  42311819 ggtcctatttacaagaaaaaattgactttttaaatacattgaataat 42311865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1138227 - 1138280
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||||||||||||| ||||||| |||  ||||||||||| |||||    
T  1138227 ggtcctatttataagaaacaatttacttttttgatttattgaataattaatgta 1138280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7053657 - 7053710
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  7053657 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 7053710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13144889 - 13144942
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  13144889 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 13144942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15569470 - 15569417
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  15569470 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 15569417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21610440 - 21610387
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||| ||||||| ||||||| |||||    
T  21610440 ggtcctatttacaagaaacaattaactttttatatacattaaataatttatgta 21610387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27488356 - 27488409
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||| | ||||||||| |||| |||||||||||||    
T  27488356 ggtcctatttataagaaaaaattaattttttagattcattcaataattgatgta 27488409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41989573 - 41989626
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  41989573 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 41989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 2825997 - 2825953
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||| || |||| | ||||||||||||||||||||||||||||    
T  2825997 tcctatttacaagagaaaattgactttttagatacattgaataat 2825953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 3814101 - 3814057
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| |||||||||||||||| | |||||||||| |||||    
T  3814101 tataagaaaaaattgactttttagattcgttgaataattaatgta 3814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 6499999 - 6500043
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||||    
T  6499999 tataagaaacaattgacattttagatttattaaataattgatgta 6500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11142493 - 11142449
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||| | ||||| ||| ||||||||||||||||||    
T  11142493 tataagaaacaattcatttttttgattcattgaataattgatgta 11142449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 35349543 - 35349499
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||| ||| |||||||||||||||| |||||| |||||||||||    
T  35349543 tataaaaaataattgactttttagattcattgagtaattgatgta 35349499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20459250 - 20459303
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  20459250 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 20459303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43020894 - 43020841
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  43020894 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 43020841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47866174 - 47866121
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  47866174 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 47866121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53225783 - 53225730
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||| |||||    
T  53225783 ggtcctatttataagaaaaaattgactttttagattcattgaataattaatgta 53225730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 16412247 - 16412293
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgat 51  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||    
T  16412247 ctatttataagaaaaaattgactttttagattcattgaataattgat 16412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2643617 - 2643670
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||||||||||||| | |||||||||||| |||||    
T  2643617 ggtcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 4698644 - 4698685
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  4698644 aagaaacaattgaatttttagatacattgaataatttatgta 4698685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18135452 - 18135399
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  18135452 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 18135399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20745341 - 20745394
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||| ||||||||    
T  20745341 ggtcctatatataaaaaacaatttacttttttgattcattgaatagttgatgta 20745394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31227280 - 31227333
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  31227280 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 31227333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31854518 - 31854465
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  31854518 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 31854465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38688050 - 38687997
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  38688050 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 38687997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 39732022 - 39732063
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  39732022 aagaaacaattgactttttagacacattgaataatttatgta 39732063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40780259 - 40780312
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||| ||||||||    
T  40780259 ggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgta 40780312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42169182 - 42169129
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | ||||||||||||||  |||||||||||||||||    
T  42169182 ggtcctatttataagaaaaatttgactttttagatttattgaataattgatgta 42169129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48361061 - 48361114
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||||||||||||| |||||| |||||||||||    
T  48361061 ggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgta 48361114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53621467 - 53621414
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  53621467 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 53621414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 55190676 - 55190729
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| || || ||||||||||||    
T  55190676 ggtcctatatataagaaacaatttacttttttgattcagtggataattgatgta 55190729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 2411978 - 2411926
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  2411978 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 2411926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 30191906 - 30191958
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||| |||||| ||||||||| |||||| |||||||||||    
T  30191906 gtcctatttataagaaaaaattgattttttagattcattgagtaattgatgta 30191958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 4698760 - 4698709
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||| || || |||||||||| |||||||||||||||||||||| |||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgta 4698709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49122659 - 49122612
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataatt 48  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||    
T  49122659 ggtcctatttacaagagacaatttactttttagatacattgaataatt 49122612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 1140889 - 1140927
Alignment:
Q  16 aaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  1140889 aaacaattgaatttttagattcattgaataattgatgta 1140927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4758786 - 4758832
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  4758786 ggtcctatttacaagagacagttgactttttagatacattgaataat 4758832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 15171007 - 15170969
Alignment:
Q  16 aaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  15171007 aaacaatttactttttagatacattgaataatttatgta 15170969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20688555 - 20688509
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  20688555 ggtcctatttacaagagacagttgactttttagatacattgaataat 20688509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 22210807 - 22210845
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataatt 48  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  22210807 tataagaaacaattgactttttaaattcattgaataatt 22210845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32517779 - 32517825
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| ||||||| | | ||||||||||||||||||||||||||    
T  32517779 ggtcctatttataagagaaagttgactttttagatacattgaataat 32517825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 53621337 - 53621383
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  53621337 ggtcctatttacaagagacagttgactttttagatacattgaataat 53621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2279533 - 2279586
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  2279533 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 2279586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 3043926 - 3043877
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||| | ||||| ||| ||||||||| ||||||||    
T  3043926 ctatatataagaaacaatttatttttttgattcattgaatagttgatgta 3043877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4758916 - 4758863
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  4758916 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 4758863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18430394 - 18430341
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  18430394 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 18430341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20459379 - 20459326
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  20459379 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 20459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23125655 - 23125708
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  23125655 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 23125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 26066382 - 26066431
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||||||| ||||||||||  |||| ||||||||||||||||||    
T  26066382 ctatttataagaaataattgactttcaagattcattgaataattgatgta 26066431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34226400 - 34226449
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||| |||||||| ||||||| ||| ||||||||||||||||||    
T  34226400 ctatttataataaacaatttacttttttgattcattgaataattgatgta 34226449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36099496 - 36099549
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  36099496 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 36099549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36132774 - 36132721
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||| || ||||||||    
T  36132774 ggtcttatttataagaaaaaattgacttttaagatacattgagtagttgatgta 36132721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 36866874 - 36866915
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  36866874 aagaaacaattgactttatagatttattgaataattgatgta 36866915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39877412 - 39877465
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||| ||| |||||||||||||||| ||||||| |||||    
T  39877412 ggtcctatttacaagaaacgatttactttttagatacattaaataatttatgta 39877465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41116571 - 41116624
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||||| |||||||||||    
T  41116571 ggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgta 41116624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42804265 - 42804318
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  42804265 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 42804318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42804394 - 42804341
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| | ||||| ||| |||| |||| ||||||||    
T  42804394 ggtcctatatataagaaacaatttatttttttgattcattaaatagttgatgta 42804341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43020765 - 43020818
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  43020765 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43020818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 43117989 - 43117940
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||||||| |||||| |||||| || ||||||||||||||||||    
T  43117989 ctatttataagaaaaaattgattttttacattcattgaataattgatgta 43117940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44111884 - 44111831
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||| ||||||||| | |||||||||||||| |||||| |||||||||||    
T  44111884 ggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgta 44111831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47866045 - 47866098
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  47866045 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 47866098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 54611987 - 54612036
Alignment:
Q  5 ctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||||||| |||||| |||||||||||||||| ||||||| |||||    
T  54611987 ctatttataagacacaatttactttttagatacattaaataatttatgta 54612036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 55190805 - 55190752
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| |||||| |||||| || |||| |||||||||||||    
T  55190805 ggtcctatttataagaaaaaattgattttttatattcattcaataattgatgta 55190752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 19485582 - 19485634
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||| ||||||| ||||||| |||||    
T  19485582 gtcctatttacaagaaacaatttactttttaaatacattaaataatttatgta 19485634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 24100777 - 24100821
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||    
T  24100777 tataagaaataattaactttttagattcattgaataattaatgta 24100821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 24100934 - 24100890
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||    
T  24100934 tataagaaataattaactttttagattcattgaataattaatgta 24100890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 27006515 - 27006567
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  27006515 gtcctatttacaagagacaatttactttttagatacattaaataatttatgta 27006567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 42670901 - 42670853
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgat 51  Q
    |||||| ||||||||||| |||||||||||||| ||||| |||| ||||    
T  42670901 tcctatttataagaaacatttgactttttagattcattgcataaatgat 42670853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 48361190 - 48361138
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||||| |||||||||| ||| ||||| |||| |||||||    
T  48361190 gtcctatttataagaaacatttgacttttttgattcattgcataaatgatgta 48361138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47678265 - 47678318
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  47678265 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgta 47678318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 25021249 - 25021293
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||    
T  25021249 tataagaaacaaatgactttttagattcattgaataattgatgta 25021293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29892269 - 29892219
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgat 51  Q
    |||||||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  29892269 ggtcctatttataggaaacaattgactttttagattcattcaataattgat 29892219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9302058 - 9302005
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||||| |||||||||||||||| ||||||| |||||    
T  9302058 ggtcctatttataagagacaatttactttttagatacattaaataatttatgta 9302005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9548681 - 9548734
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  9548681 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 9548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14281599 - 14281652
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  14281599 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 14281652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 25021358 - 25021317
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  25021358 aagaaacaattgactttttagatttattgaataattgatgta 25021317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26760182 - 26760235
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| |||||||||| ||| |||||||||| |||||||    
T  26760182 ggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgta 26760235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26924352 - 26924299
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| |||||||||| ||| |||||||||| |||||||    
T  26924352 ggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgta 26924299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28359210 - 28359157
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  28359210 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 28359157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28989281 - 28989334
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  28989281 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 28989334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34662820 - 34662767
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| |||||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  34662820 ggtcttatatataagaaacaatttacttttttgattcattgaatagttgatgta 34662767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38040415 - 38040362
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||||||||||||| |||||| |||||||||||    
T  38040415 ggtcctatttataagaaaaatttgactttttagattcattgattaattgatgta 38040362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38830492 - 38830545
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||||||||||| |||||    
T  38830492 ggtcctatttacaagagacaatttactttttagatacattgaataatttatgta 38830545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43929355 - 43929408
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||| ||||||||    
T  43929355 ggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgta 43929408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49944842 - 49944895
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| ||||||||||||||||||    
T  49944842 ggtcctatttataagaaaaatttaactttttagattcattgaataattgatgta 49944895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50155437 - 50155384
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | |||||||||||||| |||||| |||||||||||    
T  50155437 ggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgta 50155384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 47844670 - 47844622
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgat 51  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  47844670 tcctatatataagaaacaatttacttttttgattcattgaatagttgat 47844622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2352448 - 2352402
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  2352448 ggtcctatttacaagagacagttgactttttagatacattgaataat 2352402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14281729 - 14281683
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  14281729 ggtcctatttacaagagacagttgactttttagatacattgaataat 14281683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23398219 - 23398173
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || || | ||||||||||||||||||||||||||||||    
T  23398219 ggtcctatttacaatagacaattgactttttagatacattgaataat 23398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26733794 - 26733840
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||    
T  26733794 ggtcctatttacaagaaacaattaactttttagatacattaaataat 26733840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33325472 - 33325426
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||||| | ||||||||||||||||||||||||||    
T  33325472 ggtcctatttacaagaaaaagttgactttttagatacattgaataat 33325426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2961243 - 2961190
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  2961243 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 2961190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10380529 - 10380476
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  10380529 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 10380476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23398089 - 23398142
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||| | |||||||||||||||||||||||| |||||    
T  23398089 ggtcctatttacaagagacaacttactttttagatacattgaataatttatgta 23398142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27423046 - 27422993
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||| || ||||| || |||||||||||||| ||||||||||||||| |||||    
T  27423046 ggtcccatttataaaaatcaattgactttttaaatacattgaataatttatgta 27422993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29312448 - 29312501
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  29312448 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 29312501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34332615 - 34332562
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||||| |||||||||| ||| ||||| |||| |||||||    
T  34332615 ggtcctatttataagaaacatttgacttttttgattcattggataaatgatgta 34332562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38738070 - 38738017
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||||| |||||||||||    
T  38738070 ggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgta 38738017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43929484 - 43929431
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||||| | || ||||||||||| |||| |||||||||||||    
T  43929484 ggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 7375607 - 7375555
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| ||||||||| |||||||||||||||| |||||  ||||| |||||    
T  7375607 gtcctatttataagaaaaaattgactttttagattcattgtgtaattaatgta 7375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29256737 - 29256685
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgt 53  Q
    |||||||| ||||||||| | |||||||||||||| |||||| ||||| ||||    
T  29256737 ggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgt 29256685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 34332490 - 34332538
Alignment:
Q  6 tatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||   |||||||||||||| |||||| |||||||||||    
T  34332490 tatatataagaaaactttgactttttagattcattgagtaattgatgta 34332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 45848957 - 45849001
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||| |||||||| || |||| |||||||||||||    
T  45848957 tataagaaacaattaactttttatattcatttaataattgatgta 45849001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 1158383 - 1158331
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || |||||| ||||||||||||| |||||||||||||||||||||    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgta 1158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2943381 - 2943328
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||| ||||||||    
T  2943381 ggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgta 2943328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14931267 - 14931320
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||||| |||||||||||||||| ||||||| |||||    
T  14931267 ggtcctatttataagagacaatttactttttagatacattaaataatttatgta 14931320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34639179 - 34639126
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| |||||| ||||||||||||||||||| |||| |||||    
T  34639179 ggtcctatttataagagacaatttactttttagatacattgaaaaatttatgta 34639126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 6801689 - 6801637
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  6801689 gtcctatttacaagaaacaatttactttttagatacattaaataattcatgta 6801637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 28630891 - 28630847
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataa 46  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||    
T  28630891 gtcctatttataagaaacaattgactttttagattcattgcataa 28630847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22880927 - 22880974
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataatt 48  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||    
T  22880927 ggtcctatttacaagagacaatttactttttagatacattgaataatt 22880974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22898862 - 22898909
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataatt 48  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||    
T  22898862 ggtcctatttacaagagacaatttactttttagatacattgaataatt 22898909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 33127915 - 33127872
Alignment:
Q  11 ataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||  ||||||||||| |||||    
T  33127915 ataagaaacaattgactttttagatttattgaataattaatgta 33127872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 885611 - 885657
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| ||| ||||||||||||||||||||||||||    
T  885611 ggtcctatttacaagagacagttgactttttagatacattgaataat 885657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 14931380 - 14931346
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataat 47  Q
    |||| ||||||||||||||||||||||||||||||    
T  14931380 aagagacaattgactttttagatacattgaataat 14931346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24949640 - 24949686
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| | ||||||||||||||||||||||||||||    
T  24949640 ggtcctatttacaagagaaaattgactttttagatacattgaataat 24949686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 390944 - 390891
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  390944 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 390891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 1301934 - 1301971
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  1301934 tataagaaacaattgattttttagatacattcaataat 1301971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2810217 - 2810164
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||| |||| |||||||  || ||||||||| ||||||||    
T  2810217 ggtcctatatataagaaataatttacttttttcattcattgaatagttgatgta 2810164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 5483988 - 5483947
Alignment:
Q  13 aagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||||| | |||||||||| |||||    
T  5483988 aagaaacaattgactttttagattcgttgaataattaatgta 5483947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7405453 - 7405506
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  7405453 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 7405506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 8558924 - 8558969
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    ||||||| || |||| | ||||||||||||||||||||||||||||    
T  8558924 gtcctatttacaagagaaaattgactttttagatacattgaataat 8558969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24949770 - 24949717
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  24949770 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 24949717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27909114 - 27909061
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||||||| ||||||||||  || ||||||||||||||||||    
T  27909114 ggtcctatttacaagaaacatttgacttttttaattcattgaataattgatgta 27909061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1836978 - 1837022
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||| ||||||| |||  |||||||||||||||||    
T  1836978 tataagaaacaatttacttttttgattaattgaataattgatgta 1837022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 9343138 - 9343182
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| |||||||||||||||| ||| |||||||| |||||    
T  9343138 tataagaaataattgactttttagattcatagaataattaatgta 9343182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 30686554 - 30686606
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  30686554 gtcctatttacaagagacaatttactttttagatacattaaataatttatgta 30686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 423372 - 423334
Alignment:
Q  16 aaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  423372 aaacaattgactttttagattcattgaataattgatgta 423334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 492443 - 492391
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  492443 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 492391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29253 - 29306
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  29253 ggtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 29306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 453 - 505
Alignment:
Q  2 gtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||| |||||    
T  453 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgta 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 582 - 536
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataat 47  Q
    |||||||| || |||| | ||||||||||||||||||||||||||||    
T  582 ggtcctatttacaagagaaaattgactttttagatacattgaataat 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5544 - 5500
Alignment:
Q  10 tataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||    
T  5544 tataagaaataattgactttttagattcattgaataattaatgta 5500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 7261 - 7210
Alignment:
Q  3 tcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    ||||||||||||||||||||| ||||||| ||| |||| |||| ||||||||    
T  7261 tcctatatataagaaacaatttacttttttgattcattaaatagttgatgta 7210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35963 - 36016
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| || |||| |||||| |||||||||||||||| ||||||| |||||    
T  35963 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgta 36016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 112952 - 112909
Alignment:
Q  11 ataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||||||||||||||||||||  ||||||||||| |||||    
T  112952 ataagaaacaattgactttttagatttattgaataattaatgta 112909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1671 - 1618
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||| ||| ||||||||| |||| | ||||||||| ||||||||||||||||||    
T  1671 ggtcttatttataagaaaaaattaattttttagattcattgaataattgatgta 1618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 77354 - 77407
Alignment:
Q  1 ggtcctatatataagaaacaattgactttttagatacattgaataattgatgta 54  Q
    |||||||| ||||||| | | ||||||||| ||||||||||||||||| |||||    
T  77354 ggtcctatttataagagaaagttgacttttcagatacattgaataatttatgta 77407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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