View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8685_low_10 (Length: 240)
Name: NF8685_low_10
Description: NF8685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8685_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 51435084 - 51435295
Alignment:
| Q |
1 |
tccaaacaagaaacgaaataatgaattagacaaaacagaaccaattacttggacagcggcttttgccatagcaagtaaaacgtagtaaaaacccaacatc |
100 |
Q |
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| T |
51435084 |
tccaaacaagaaacgaaataatgaattagacaaaacggaaccaattacttggacagcggcttttgccatagcaagtaaaacgtagtaaaaacccaacatc |
51435183 |
T |
|
| Q |
101 |
tcgagggttgataaaagtaaagttaagcttaagatcaatgaagtttaataaatgcagccaaaatattcatattaaagaagaacgccaaacagcagcagac |
200 |
Q |
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| T |
51435184 |
tcgagggttgataaaagtaaagttaagcttaagatcaatgaagtttaataaatgcagccaaaatattcatattaaagaagaacgccaaacagcagcagac |
51435283 |
T |
|
| Q |
201 |
agatagatagat |
212 |
Q |
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|||||||||||| |
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| T |
51435284 |
agatagatagat |
51435295 |
T |
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