View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8685_low_5 (Length: 360)

Name: NF8685_low_5
Description: NF8685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8685_low_5
NF8685_low_5
[»] scaffold0156 (1 HSPs)
scaffold0156 (162-352)||(35233-35423)
[»] chr8 (13 HSPs)
chr8 (164-330)||(25579709-25579877)
chr8 (164-320)||(30938282-30938438)
chr8 (164-330)||(39837459-39837627)
chr8 (164-311)||(17973565-17973712)
chr8 (164-298)||(4839713-4839847)
chr8 (164-330)||(1406970-1407138)
chr8 (164-330)||(39845502-39845670)
chr8 (164-300)||(17683725-17683861)
chr8 (164-300)||(17664569-17664705)
chr8 (164-339)||(26873493-26873669)
chr8 (164-339)||(26875943-26876119)
chr8 (164-225)||(6670711-6670772)
chr8 (164-262)||(4582204-4582302)
[»] chr6 (22 HSPs)
chr6 (164-354)||(5994699-5994890)
chr6 (164-300)||(30824458-30824594)
chr6 (164-320)||(5004061-5004217)
chr6 (164-330)||(11279837-11280005)
chr6 (163-311)||(13825702-13825850)
chr6 (164-300)||(25550295-25550431)
chr6 (164-339)||(33298085-33298259)
chr6 (164-320)||(25506450-25506606)
chr6 (166-354)||(25991852-25992040)
chr6 (164-320)||(35091585-35091741)
chr6 (164-336)||(23925335-23925507)
chr6 (164-291)||(15391549-15391676)
chr6 (223-299)||(26526632-26526708)
chr6 (164-255)||(13490193-13490284)
chr6 (269-354)||(5489040-5489125)
chr6 (164-213)||(5489135-5489184)
chr6 (164-256)||(11053702-11053794)
chr6 (231-290)||(14894939-14894998)
chr6 (283-354)||(25711862-25711933)
chr6 (164-225)||(30114444-30114505)
chr6 (267-354)||(25690866-25690953)
chr6 (267-354)||(25697659-25697746)
[»] chr3 (27 HSPs)
chr3 (164-354)||(14538479-14538670)
chr3 (164-320)||(41006556-41006712)
chr3 (164-320)||(41015336-41015492)
chr3 (164-330)||(8154541-8154709)
chr3 (164-354)||(50824352-50824546)
chr3 (164-354)||(50851314-50851508)
chr3 (164-354)||(27341209-27341400)
chr3 (163-354)||(2211238-2211429)
chr3 (164-320)||(9525343-9525499)
chr3 (162-318)||(9555019-9555175)
chr3 (164-331)||(28470116-28470282)
chr3 (164-289)||(17933655-17933780)
chr3 (166-290)||(43470492-43470615)
chr3 (164-289)||(17919199-17919324)
chr3 (172-289)||(16816145-16816261)
chr3 (157-228)||(17628258-17628329)
chr3 (164-262)||(21186747-21186845)
chr3 (164-266)||(30439-30541)
chr3 (162-262)||(18349554-18349654)
chr3 (280-354)||(13509299-13509373)
chr3 (164-262)||(8197663-8197761)
chr3 (164-257)||(18039011-18039104)
chr3 (280-334)||(14881220-14881276)
chr3 (161-191)||(6973261-6973291)
chr3 (280-334)||(14893051-14893107)
chr3 (249-290)||(16288692-16288733)
chr3 (163-191)||(13604165-13604193)
[»] chr7 (21 HSPs)
chr7 (1-163)||(20430134-20430292)
chr7 (164-354)||(10439937-10440127)
chr7 (163-329)||(18304292-18304458)
chr7 (164-330)||(4952294-4952462)
chr7 (164-320)||(12978455-12978611)
chr7 (164-330)||(13831500-13831668)
chr7 (164-330)||(13839531-13839699)
chr7 (1-143)||(20409252-20409390)
chr7 (1-151)||(20409403-20409549)
chr7 (1-159)||(20431686-20431839)
chr7 (3-118)||(20444545-20444656)
chr7 (3-118)||(20424844-20424955)
chr7 (13-124)||(20444418-20444525)
chr7 (164-289)||(21662962-21663088)
chr7 (164-257)||(30244775-30244868)
chr7 (164-225)||(4941581-4941642)
chr7 (172-262)||(30255420-30255510)
chr7 (164-257)||(30245568-30245661)
chr7 (1-88)||(20424737-20424820)
chr7 (235-290)||(1955691-1955746)
chr7 (280-335)||(43906204-43906261)
[»] chr4 (14 HSPs)
chr4 (164-300)||(8094211-8094347)
chr4 (164-300)||(8103017-8103153)
chr4 (164-354)||(52295604-52295795)
chr4 (164-354)||(27343566-27343756)
chr4 (164-354)||(12996476-12996666)
chr4 (163-320)||(4523589-4523746)
chr4 (164-331)||(21532203-21532369)
chr4 (164-289)||(12428418-12428543)
chr4 (164-290)||(33188766-33188891)
chr4 (164-237)||(10638328-10638400)
chr4 (268-354)||(10638410-10638496)
chr4 (161-289)||(3424328-3424454)
chr4 (219-262)||(12402907-12402950)
chr4 (280-335)||(10814330-10814385)
[»] chr1 (17 HSPs)
chr1 (163-320)||(31539953-31540110)
chr1 (164-320)||(31548523-31548679)
chr1 (163-354)||(41746567-41746759)
chr1 (164-320)||(35103973-35104129)
chr1 (164-330)||(3432787-3432955)
chr1 (164-339)||(32137644-32137819)
chr1 (4-163)||(5875329-5875484)
chr1 (4-163)||(5879218-5879373)
chr1 (164-289)||(29221429-29221553)
chr1 (164-289)||(44320132-44320257)
chr1 (166-289)||(28457556-28457681)
chr1 (163-262)||(21498865-21498964)
chr1 (280-354)||(13450139-13450213)
chr1 (166-257)||(51058360-51058450)
chr1 (207-289)||(8241438-8241520)
chr1 (164-198)||(20314058-20314092)
chr1 (243-287)||(13462775-13462819)
[»] chr5 (20 HSPs)
chr5 (164-320)||(24956755-24956911)
chr5 (164-320)||(24965218-24965374)
chr5 (164-354)||(20372788-20372978)
chr5 (164-354)||(20398510-20398700)
chr5 (164-337)||(23349968-23350141)
chr5 (164-330)||(43597943-43598111)
chr5 (164-330)||(43603435-43603603)
chr5 (164-330)||(43608927-43609095)
chr5 (164-339)||(29186168-29186343)
chr5 (164-330)||(1728056-1728224)
chr5 (164-330)||(28843940-28844108)
chr5 (164-330)||(28852550-28852718)
chr5 (164-352)||(31410890-31411078)
chr5 (164-354)||(31421789-31421980)
chr5 (164-255)||(19223555-19223646)
chr5 (162-257)||(41099748-41099843)
chr5 (164-289)||(21929236-21929360)
chr5 (280-354)||(40014981-40015057)
chr5 (243-289)||(23028007-23028053)
chr5 (242-288)||(23037923-23037969)
[»] chr2 (28 HSPs)
chr2 (164-320)||(14582925-14583081)
chr2 (164-320)||(15944466-15944622)
chr2 (164-320)||(15952981-15953137)
chr2 (164-320)||(35138593-35138749)
chr2 (164-320)||(35146929-35147085)
chr2 (164-320)||(41233753-41233909)
chr2 (164-320)||(38168266-38168422)
chr2 (162-330)||(42574450-42574620)
chr2 (164-330)||(42565826-42565994)
chr2 (193-354)||(35037885-35038046)
chr2 (164-296)||(20621518-20621650)
chr2 (154-291)||(20372252-20372388)
chr2 (162-269)||(17687358-17687465)
chr2 (164-255)||(25483601-25483692)
chr2 (164-255)||(25491207-25491298)
chr2 (164-273)||(44372705-44372814)
chr2 (164-273)||(44388616-44388725)
chr2 (163-289)||(35303736-35303862)
chr2 (293-354)||(17687296-17687357)
chr2 (164-262)||(27606612-27606709)
chr2 (163-257)||(24285695-24285789)
chr2 (164-262)||(42249422-42249520)
chr2 (163-262)||(34070571-34070670)
chr2 (164-256)||(21322784-21322875)
chr2 (164-225)||(24292372-24292433)
chr2 (218-290)||(18989312-18989384)
chr2 (166-262)||(26903300-26903396)
chr2 (280-354)||(11873790-11873866)
[»] scaffold0497 (1 HSPs)
scaffold0497 (164-354)||(10993-11182)
[»] scaffold0111 (1 HSPs)
scaffold0111 (164-354)||(33035-33225)
[»] scaffold0016 (1 HSPs)
scaffold0016 (164-354)||(23464-23655)
[»] scaffold0173 (1 HSPs)
scaffold0173 (164-335)||(823-994)
[»] scaffold0002 (1 HSPs)
scaffold0002 (164-311)||(121228-121375)
[»] scaffold0209 (1 HSPs)
scaffold0209 (164-300)||(13-149)
[»] scaffold0632 (1 HSPs)
scaffold0632 (164-353)||(4390-4580)
[»] scaffold0083 (1 HSPs)
scaffold0083 (164-320)||(15813-15970)
[»] scaffold0170 (1 HSPs)
scaffold0170 (162-290)||(7129-7257)
[»] scaffold0039 (1 HSPs)
scaffold0039 (164-275)||(40787-40898)
[»] scaffold0431 (1 HSPs)
scaffold0431 (164-289)||(139-264)
[»] scaffold0222 (1 HSPs)
scaffold0222 (162-289)||(20422-20549)
[»] scaffold0991 (1 HSPs)
scaffold0991 (162-264)||(338-440)
[»] scaffold0027 (1 HSPs)
scaffold0027 (232-339)||(65593-65701)
[»] scaffold0044 (2 HSPs)
scaffold0044 (164-262)||(81753-81851)
scaffold0044 (164-262)||(65505-65603)
[»] scaffold0048 (2 HSPs)
scaffold0048 (164-236)||(7622-7694)
scaffold0048 (268-337)||(7547-7616)
[»] scaffold0315 (1 HSPs)
scaffold0315 (234-290)||(10595-10651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (164-257)||(192528-192621)
[»] scaffold0863 (1 HSPs)
scaffold0863 (164-262)||(339-437)
[»] scaffold0545 (1 HSPs)
scaffold0545 (280-354)||(9878-9954)
[»] scaffold0290 (1 HSPs)
scaffold0290 (218-290)||(15760-15832)
[»] scaffold1487 (1 HSPs)
scaffold1487 (171-210)||(762-801)
[»] scaffold0514 (1 HSPs)
scaffold0514 (164-225)||(10912-10973)
[»] scaffold0389 (1 HSPs)
scaffold0389 (164-262)||(416-514)
[»] scaffold0323 (1 HSPs)
scaffold0323 (287-354)||(17602-17669)
[»] scaffold0043 (1 HSPs)
scaffold0043 (243-290)||(61041-61088)
[»] scaffold0484 (1 HSPs)
scaffold0484 (164-213)||(11457-11507)
[»] scaffold0167 (1 HSPs)
scaffold0167 (280-335)||(8084-8141)


Alignment Details
Target: scaffold0156 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 162 - 352
Target Start/End: Complemental strand, 35423 - 35233
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  35423 tgtgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgac 35324  T
Q  262 aaagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccat 352  Q
    ||||| |||||||||||||||||||||||| |||||||| || ||||||||  || |||||||||||||||||||||| ||| || |||||    
T  35323 aaagaggttactttgaagtacctcattttttattccgagtcgggccctcttcgctttttattttctttttatttcagtatttaatttccat 35233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 25579877 - 25579709
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25579877 tgtcataccctaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 25579778  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||  |||||||||||||    
T  25579777 agaggttactttgaagtacctcattttttattccgagtcgaaccctctttcctctttttattttctttt 25579709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 30938282 - 30938438
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30938282 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30938381  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  30938382 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 30938438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 39837627 - 39837459
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39837627 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 39837528  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  39837527 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 39837459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 17973565 - 17973712
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||     
T  17973565 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 17973664  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctct 311  Q
    ||| |||||||||||||||||||||||| |||||||| || |||||||    
T  17973665 agaggttactttgaagtacctcattttttattccgagtcgggccctct 17973712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 4839847 - 4839713
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  4839847 tgtcataccccaaattttgaccgcttttctctattcttacctattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 4839748  T
Q  264 agaagttactttgaagtacctcatttttgattccg 298  Q
    |||||||||||||||||||||||||||||||||||    
T  4839747 agaagttactttgaagtacctcatttttgattccg 4839713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 1407138 - 1406970
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  1407138 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaa 1407039  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  1407038 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 1406970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 39845670 - 39845502
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39845670 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 39845571  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |  ||||| ||  |||||||| |||  |||||||||||||    
T  39845570 agaggttactttgaagtacctcattttttaaaccgagtcggaccctcttttctctttttattttctttt 39845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 17683861 - 17683725
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  17683861 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaa 17683762  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    |||||||||||||||||||||||||||| ||||||||    
T  17683761 agaagttactttgaagtacctcattttttattccgag 17683725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 17664705 - 17664569
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  17664705 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcatcgtttcagacgaaattttgacaa 17664606  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    |||||||||||||||||||||||||||| ||||||||    
T  17664605 agaagttactttgaagtacctcattttttattccgag 17664569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 26873669 - 26873493
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||| | |||    
T  26873669 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgacaa 26873570  T
Q  264 agaagttactttgaagtacctca-tttttgattccgagccgagccctctttcctctttattttctttttatttcagt 339  Q
    ||| |||||||| |||||||| | ||||||||||||||  | ||| ||||  |||||||||||||||||||||||||    
T  26873569 agaggttactttaaagtaccttattttttgattccgagtagggccgtcttctctctttattttctttttatttcagt 26873493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 26876119 - 26875943
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||| | |||    
T  26876119 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaa 26876020  T
Q  264 agaagttactttgaagtacctcat-ttttgattccgagccgagccctctttcctctttattttctttttatttcagt 339  Q
    ||| |||||||| || |||||||| |||||||||||||  | ||| ||||  |||||||||||||||||||||||||    
T  26876019 agaggttactttaaaatacctcattttttgattccgagtagggccatcttctctctttattttctttttatttcagt 26875943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 6670711 - 6670772
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacc-cattttatttgtatttttaaa 225  Q
    |||||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||    
T  6670711 tgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 6670772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 4582204 - 4582302
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||  ||||||||||||||||| |||||| |||| |||||| ||  || |||||||  ||| ||| | |||| ||| ||||||||||| ||||    
T  4582204 tgtcataccttaaattttgaccacttttctctatttttacacattttgttcatacttttaaaaccggaaatgtccgtcattttagacgaaatttcggca 4582302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 5994699 - 5994890
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  5994699 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggcaa 5994798  T
Q  264 agaagttactttgaagtacctca-tttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| ||||||||||||||||||| |||||||||||||| || |||||||| ||||||| |||||||||||||| ||| ||| || |||||||    
T  5994799 agaggttactttgaagtacctcattttttgattccgagtcgggccctcttccctctttgttttctttttattttagtatttaatttccatct 5994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 30824594 - 30824458
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30824594 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30824495  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    ||| |||||||||||||||||||||||||||||||||    
T  30824494 agaggttactttgaagtacctcatttttgattccgag 30824458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 5004061 - 5004217
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004061 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 5004160  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  5004161 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 5004217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 11279837 - 11280005
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  11279837 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 11279936  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  11279937 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 11280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 163 - 311
Target Start/End: Original strand, 13825702 - 13825850
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||    
T  13825702 gtgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgaca 13825801  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctct 311  Q
     ||| ||||||||||||||||||||||||||||||||| || |||||||    
T  13825802 gagaggttactttgaagtacctcatttttgattccgagtcgggccctct 13825850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 25550295 - 25550431
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||     
T  25550295 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggcag 25550394  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    ||| |||||||||||||||||||||||| ||||||||    
T  25550395 agaggttactttgaagtacctcattttttattccgag 25550431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 164 - 339
Target Start/End: Original strand, 33298085 - 33298259
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  33298085 tgtcataccccaacttttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 33298184  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagt 339  Q
    || ||||||||||||||||||||||||| ||||||||  |  |||| ||  ||||||||||| |||||||||||||    
T  33298185 ag-agttactttgaagtacctcattttttattccgagtaggacccttttctctctttattttatttttatttcagt 33298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 25506606 - 25506450
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||     
T  25506606 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcag 25506507  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
    ||| |||||||| || ||||||||||||||||||||| |  ||||||||| ||||||    
T  25506506 agaggttactttaaaatacctcatttttgattccgagtcaggccctcttttctcttt 25506450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 166 - 354
Target Start/End: Original strand, 25991852 - 25992040
Alignment:
Q  166 tcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaag 265  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || | ||    
T  25991852 tcataccccaaatgttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagag 25991951  T
Q  266 aagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    | |||||||||||||||||||||||| |||| ||| ||  |||||||  |||||||||| || ||||||||| | ||| || |||||||    
T  25991952 aggttactttgaagtacctcattttttattcagagtcggaccctcttctctctttatttactctttatttcattatttaatttccatct 25992040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 35091741 - 35091585
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35091741 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaa 35091642  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || |||||||||||||||||||||||| ||| |||  ||  |||||||| ||||||    
T  35091641 ggaggttactttgaagtacctcattttttatttcgaatcggaccctcttttctcttt 35091585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 164 - 336
Target Start/End: Original strand, 23925335 - 23925507
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||  |||||||||| || |     
T  23925335 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtag 23925434  T
Q  264 agaagttactttgaagtacctca-tttttgattccgagccgagccctctttcctctttattttctttttatttc 336  Q
    ||| ||||||||||||||||||| |||||||||||||| |  |||||||| ||||||| |||| ||||||||||    
T  23925435 agatgttactttgaagtacctcattttttgattccgagtcaggccctcttccctctttgtttt-tttttatttc 23925507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 15391676 - 15391549
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||| |||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||| | |||||||||||||||||||||||||||| | |||    
T  15391676 tgtcatatcccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgacaa 15391577  T
Q  264 agaagttactttgaagtacctcattttt 291  Q
    ||| ||||||||||||||||||||||||    
T  15391576 agaggttactttgaagtacctcattttt 15391549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 26526708 - 26526632
Alignment:
Q  223 aaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttttgattccga 299  Q
    ||||||||||||||||||||||||||||||||| | |||| ||  ||||||||||| ||||||||||||| ||||||    
T  26526708 aaagtcgggaattttcgtcgtttcagacgaaatatcggcagagtggttactttgaattacctcatttttggttccga 26526632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 13490193 - 13490284
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaat 255  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||| | ||||  |||||||||||||  |||||||| ||||    
T  13490193 tgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatctgtaaaaccgggaattttcgttatttcagacaaaat 13490284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 5489125 - 5489040
Alignment:
Q  269 ttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||||||||||||| |||||||||||||| || ||  |||| || |||||||||||||||||||||||||| ||| || |||||||    
T  5489125 ttactttgaagtacttcatttttgattccaagtcggaccctgttccctctttattttctttttatttcagtatttaatttccatct 5489040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 5489184 - 5489135
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatt 213  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5489184 tgtcataccccaaattttgaccacttttctctattcttacccattttatt 5489135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 11053702 - 11053794
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacc-cattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaatt 256  Q
    |||||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||  |  ||||||||||  ||||||||||||||    
T  11053702 tgtcataccccaaattttgaccacttttttctatttttaccaaattttattcgtatttttaaa-accagaattttcgttatttcagacgaaatt 11053794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 14894939 - 14894998
Alignment:
Q  231 gaattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    ||||||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  14894939 gaatttttgtcgcttcagacgatatttcggcaaagaaattactttgaagtacctcatttt 14894998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 25711862 - 25711933
Alignment:
Q  283 ctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||||||||||||||||| || ||||||||  ||||||||||||| ||||||||| | ||| || |||||||    
T  25711862 ctcatttttgattccgagtcgggccctcttctctctttattttctctttatttcattatttaatttccatct 25711933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 30114444 - 30114505
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacc-cattttatttgtatttttaaa 225  Q
    |||||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||    
T  30114444 tgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 30114505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 25690866 - 25690953
Alignment:
Q  267 agttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||| ||| || |||||||||||| |||||||| ||  |||||||  ||||||||||||| ||||||||| | ||| || |||||||    
T  25690866 agttattttaaaatacctcattttttattccgagtcggaccctcttctctctttattttctctttatttcattatttaatttccatct 25690953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 25697659 - 25697746
Alignment:
Q  267 agttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||| ||| || |||||||||||| |||||||| ||  |||||||  ||||||||||||| ||||||||| | ||| || |||||||    
T  25697659 agttattttaaaatacctcattttttattccgagtcggaccctcttctctctttattttctctttatttcattatttaatttccatct 25697746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 14538670 - 14538479
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc-a 262  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  14538670 tgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaa 14538571  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||| |||||||||||||||||||||||| |||||||| || ||||||||  ||||||||||||||||||||||||||||| || |||||||    
T  14538570 aagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttatttcagtgtttaatttccatct 14538479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 41006556 - 41006712
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41006556 tgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 41006655  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  41006656 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 41006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 41015336 - 41015492
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41015336 tgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 41015435  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  41015436 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 41015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 8154709 - 8154541
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8154709 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 8154610  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  8154609 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 8154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 50824352 - 50824546
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||     
T  50824352 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 50824451  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcc----tctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||  |    |||||||||||||||||||||||| ||| || |||||||    
T  50824452 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttctttattttctttttatttcagtatttaatttccatct 50824546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 50851508 - 50851314
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||     
T  50851508 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 50851409  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcc----tctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||  |    |||||||||||||||||||||||| ||| || |||||||    
T  50851408 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttctttattttctttttatttcagtatttaatttccatct 50851314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 27341400 - 27341209
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||     
T  27341400 tgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 27341301  T
Q  264 agaagttactttgaagtacctcat-ttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    | | |||||||||||||||||||| |||| |||||||| |  |||||||| |||||||||||||||| ||||||||| ||| || |||||||    
T  27341300 aaaggttactttgaagtacctcatttttttattccgagtcaggccctcttccctctttattttctttctatttcagtatttaatttccatct 27341209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 163 - 354
Target Start/End: Original strand, 2211238 - 2211429
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  2211238 gtgtcataccctaaattttgaccacttttctctattcttacctattttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggca 2211337  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||| | || ||| || |||||||||||| |||||||| |  ||||||||  ||||||||||||||||||||||||| ||| || |||||||    
T  2211338 aagagggtattttaaaatacctcattttttattccgagtcaggccctcttctctctttattttctttttatttcagtatttaatttccatct 2211429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 9525499 - 9525343
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||     
T  9525499 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcag 9525400  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
    | | |||||||| || |||||||||||| |||||||| || ||||||||| ||||||    
T  9525399 aaaggttactttaaaatacctcattttttattccgagtcgggccctcttttctcttt 9525343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 9555175 - 9555019
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||| |||    
T  9555175 tgtgtcataccccaaattttgatcacttttctctattcttacccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggc 9555076  T
Q  262 aaagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctct 318  Q
    | | | |||||||| || |||||||||||| |||||||| || ||||||||| ||||    
T  9555075 agaaaggttactttaaaatacctcattttttattccgagtcgggccctcttttctct 9555019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 331
Target Start/End: Complemental strand, 28470282 - 28470116
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||| |||||||||||||| | |||||||||||||||||||||||||| | |||    
T  28470282 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcgacaa 28470183  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttcttttt 331  Q
    | |  ||||| ||||||||||||||||| |||| ||| ||  |||| ||  ||||||||||| |||||    
T  28470182 a-agattactatgaagtacctcattttttattctgagtcggacccttttctctctttattttattttt 28470116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 17933655 - 17933780
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||   |      
T  17933655 tgtcataccccaaattttgaccaattttctctatttttacccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttcttcgg 17933754  T
Q  264 agaagttactttgaagtacctcattt 289  Q
    ||| ||||||||||||||||||||||    
T  17933755 agaggttactttgaagtacctcattt 17933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 290
Target Start/End: Complemental strand, 43470615 - 43470492
Alignment:
Q  166 tcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaag 265  Q
    ||||||||||||||||||| |||||| |||||| |||||| ||||||| |||||||||||| || |||||||  |||||||||||||||||| |||| ||    
T  43470615 tcataccccaaattttgactactttt-tctatttttaccctttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagag 43470517  T
Q  266 aagttactttgaagtacctcatttt 290  Q
    | |||||||||||||||||||||||    
T  43470516 aggttactttgaagtacctcatttt 43470492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 17919199 - 17919324
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||| ||  |||||||||  ||||||||||||||| | |      
T  17919199 tgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtcgg 17919298  T
Q  264 agaagttactttgaagtacctcattt 289  Q
    ||| |||||||| |||||||||||||    
T  17919299 agaggttactttaaagtacctcattt 17919324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 16816261 - 16816145
Alignment:
Q  172 cccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaagtta 271  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||||||| ||| |||||||||  ||||||||||||||||| |  || || ||    
T  16816261 cccaaattttgaccacttttctctatttttactcattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattttgacggag-aggta 16816163  T
Q  272 ctttgaagtacctcattt 289  Q
    ||||||||||||||||||    
T  16816162 ctttgaagtacctcattt 16816145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 17628258 - 17628329
Alignment:
Q  157 atatgtgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtc 228  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  17628258 atatatgtgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtc 17628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 21186747 - 21186845
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||| ||| |||||||| || |||||||||| |||||| ||||||||| ||||    
T  21186747 tgtcataccccaaattttgaccacttttatctgtttttatccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttcggca 21186845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 30541 - 30439
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||| |||||| |||||||  ||| ||| | |||||||| ||||||||||| |||||    
T  30541 tgtcataccccaaattttgaccacttttctctatttttacacattttgtttgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcaa 30442  T
Q  264 aga 266  Q
    |||    
T  30441 aga 30439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 18349554 - 18349654
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    ||||| ||||||||||||||||| |||||| |||||| |||| ||||||||| ||| ||||||| |||| ||| | |||||||| ||||||||||| |||    
T  18349554 tgtgtgataccccaaattttgacaacttttctctatttttacacattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttcggc 18349653  T
Q  262 a 262  Q
    |    
T  18349654 a 18349654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 13509373 - 13509299
Alignment:
Q  280 tacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||  ||| ||||||||||    
T  13509373 tacctcatttttgattccgaatcgggccctcttccctctttattttctttttatttcagcctttaatgtccatct 13509299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 8197761 - 8197663
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||| || ||| |||||||  ||| ||| | |||||||| |||| |||||| ||||    
T  8197761 tgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacaaaatttcggca 8197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 18039011 - 18039104
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    |||||||||||||||||||||||||||| ||  || |||||||||||||| ||||||| || | || |||   |||| ||||||||||||||||    
T  18039011 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgttgtttcagacgaaattt 18039104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 14881276 - 14881220
Alignment:
Q  280 tacctcatttttgattccgagccgagccctcttt--cctctttattttctttttatt 334  Q
    ||||||||||||||||||||| || |||||||||   ||||||||||||||||||||    
T  14881276 tacctcatttttgattccgagtcgggccctcttttctctctttattttctttttatt 14881220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 191
Target Start/End: Complemental strand, 6973291 - 6973261
Alignment:
Q  161 gtgtgtcataccccaaattttgaccactttt 191  Q
    |||||||||||||||||||||||||||||||    
T  6973291 gtgtgtcataccccaaattttgaccactttt 6973261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 14893107 - 14893051
Alignment:
Q  280 tacctcatttttgattccgagccgagccctcttt--cctctttattttctttttatt 334  Q
    ||||||||||||||||||||| ||  ||||||||   ||||||||||||||||||||    
T  14893107 tacctcatttttgattccgagtcggcccctcttttctctctttattttctttttatt 14893051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 16288692 - 16288733
Alignment:
Q  249 acgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    ||||||||| |||| ||| |||||||||||||||||||||||    
T  16288692 acgaaatttcggcagagaggttactttgaagtacctcatttt 16288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 13604193 - 13604165
Alignment:
Q  163 gtgtcataccccaaattttgaccactttt 191  Q
    |||||||||||||||||||||||||||||    
T  13604193 gtgtcataccccaaattttgaccactttt 13604165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20430134 - 20430292
Alignment:
Q  1 atactcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagctt 100  Q
    |||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20430134 atactcaaagggaagtgggatgaagctgagaagtatc----catcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagctt 20430229  T
Q  101 agaaaacaaaaatatctttaggcagtgggcaggtatttaagaattttatgctctatatatgtg 163  Q
     ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  20430230 tgaaaacaaaaatatctttaggcagtcgacaggtatttaagaattttatgctctatatatgtg 20430292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 10439937 - 10440127
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||     
T  10439937 tgtcataccccaaattttgaccacttttctctattcttgcccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 10440036  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||| ||||||||||||||| |||||||| |   |||||||| ||||||||||||||||||||||||| ||| || |||||||    
T  10440037 agaggttactttaaagtacctcattttttattccgagtcagaccctcttttctctttattttctttttatttcagtatttaatttccatct 10440127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 329
Target Start/End: Complemental strand, 18304458 - 18304292
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304458 gtgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 18304359  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttcttt 329  Q
    |||| |||||||||||||||||||||||| ||| |||| ||  |||||||| |||||| ||||||||    
T  18304358 aagaggttactttgaagtacctcattttttatttcgagtcggaccctcttttctcttttttttcttt 18304292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 4952462 - 4952294
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4952462 tgtcatacctcaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaa 4952363  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  ||||||||||||  |||||||||||||    
T  4952362 agaggttactttgaagtacctcattttttattccgagtcggaccctctttcctctttttattttctttt 4952294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 12978455 - 12978611
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12978455 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 12978554  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  12978555 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 12978611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 13831500 - 13831668
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13831500 tgtcataccctaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 13831599  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  13831600 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 13831668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 13839531 - 13839699
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13839531 tgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 13839630  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  13839631 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 13839699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 20409252 - 20409390
Alignment:
Q  1 atactcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  20409252 atactcaaagggaagtgggatgaagctgagaagtatctat----caggattcataaaagttgatgacaacgatcactaaatcaaaatatattttgagctt 20409347  T
Q  101 agaaaacaaaaatatctttaggcagtgggcaggtatttaagaa 143  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||    
T  20409348 agaaaacaaaaatatcttgaggcattggacaggtatttaagaa 20409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20409549 - 20409403
Alignment:
Q  1 atactcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  20409549 atactcaaagggaagtgggatgaagctgagaagtatctat----caggattcacaaaagttgaagacagcgatcactcaatcaaaatatattttgagctt 20409454  T
Q  101 agaaaacaaaaatatctttaggcagtgggcaggtatttaagaattttatgc 151  Q
    |||||||||||||||||| || ||  || ||||||||||||||||||||||    
T  20409453 agaaaacaaaaatatcttgagacataggtcaggtatttaagaattttatgc 20409403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 20431839 - 20431686
Alignment:
Q  1 atactcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagctt 100  Q
    ||||||||| ||||||||||||||||| |||| |||||||    |||||||| ||||||||||| |||||||||||| || |||||||||||||||||||    
T  20431839 atactcaaacggaagtgggatgaagctaagaattatctat----caggattcgcaaaagttgaa-acaacgatcactcaatcaaaatatattttgagctt 20431745  T
Q  101 agaaaacaaaaatatctttaggcagtgggcaggtatttaagaattttatgctctatata 159  Q
    |||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||||||    
T  20431744 agaaaacaaaaatatcttgaggcattggacatgtatttaagaattttatgctttatata 20431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 20444656 - 20444545
Alignment:
Q  3 actcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagcttag 102  Q
    |||||||||||||||||||||| ||||||| |||||||    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  20444656 actcaaagggaagtgggatgaaactgagaaatatctat----caggattcacaaaagttgaagacaacgatcactcaatcaaaatatattttgagcttag 20444561  T
Q  103 aaaacaaaaatatctt 118  Q
    ||||||||||||||||    
T  20444560 aaaacaaaaatatctt 20444545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 20424955 - 20424844
Alignment:
Q  3 actcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagcttag 102  Q
    ||||||||||||||||||||||||||| || |||||||    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  20424955 actcaaagggaagtgggatgaagctgataaatatctat----caggattcacaaaagttgaagacaacgatcacttagtcaaaatatattttgagcttag 20424860  T
Q  103 aaaacaaaaatatctt 118  Q
    ||||||||||||||||    
T  20424859 aaaacaaaaatatctt 20424844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 20444418 - 20444525
Alignment:
Q  13 aagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagcttagaaaacaaaaa 112  Q
    |||||||||||||||||||| |||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  20444418 aagtgggatgaagctgagaactatctat----caggattcacaaaagttgaagacaacgatcactaaatcaaaatatattttgagcatagaaaacaaaaa 20444513  T
Q  113 tatctttaggca 124  Q
    |||||| |||||    
T  20444514 tatcttgaggca 20444525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 21663088 - 21662962
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgta-tttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||| ||| ||||||||| || || | |||||||||| |||||||||||   ||    
T  21663088 tgtcataccccaaattttgatcacttttatctgtttttacccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttcaaca 21662989  T
Q  263 aagaagttactttgaagtacctcattt 289  Q
      || ||||||||||||||||||||||    
T  21662988 gggaggttactttgaagtacctcattt 21662962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 30244775 - 30244868
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    ||||||||| |||||||||||||||||| |||||| ||| |||||||||| |||||||||||||| ||||||||||| ||||||| || |||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctatttttatccattttattcgtatttttaaagtcaggaattttcgttgtttcagtcgtaattt 30244868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 4941642 - 4941581
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaa 225  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  4941642 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaa 4941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 30255420 - 30255510
Alignment:
Q  172 cccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||| |||||| ||| |||||||||| |||||||| | ||| | ||||||||| ||||||| || ||||| ||||    
T  30255420 cccaaattttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggca 30255510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 30245568 - 30245661
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    |||||||||| || |||||||||||||| |||||| ||| |||||||||| |||||||| | ||| | ||||||||| ||||||| || |||||    
T  30245568 tgtcatacccaaatttttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaattt 30245661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20424737 - 20424820
Alignment:
Q  1 atactcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaata 88  Q
    |||||||||| ||||||||| ||  |||||||||||||||    || |||||||||||||||| ||||||||||||| || |||||||    
T  20424737 atactcaaagagaagtgggacgacactgagaagtatctat----catgattcacaaaagttgatgacaacgatcactcaatcaaaata 20424820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 1955746 - 1955691
Alignment:
Q  235 tttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||| ||||||||||    
T  1955746 tttcgtcgtttcagacaaaatttcggcagagaggttactttgaagcacctcatttt 1955691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 43906204 - 43906261
Alignment:
Q  280 tacctcatttttgattccgagccgagccctcttt--cctctttattttctttttattt 335  Q
    ||||||||||||||||||||| || |||||||||   |||||||||||||||||||||    
T  43906204 tacctcatttttgattccgagtcgggccctcttttctctctttattttctttttattt 43906261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 8094347 - 8094211
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8094347 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 8094248  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    ||| |||||||||||||||||||||||||||||||||    
T  8094247 agaggttactttgaagtacctcatttttgattccgag 8094211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 8103153 - 8103017
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8103153 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 8103054  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    ||| |||||||||||||||||||||||||||||||||    
T  8103053 agaggttactttgaagtacctcatttttgattccgag 8103017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 52295604 - 52295795
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||     
T  52295604 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcag 52295703  T
Q  264 agaagttactttgaagtacctca-tttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||  |||||||||||||||||| |||||||||||||| || ||||||||  ||||||||||||||||||||||||| ||| || |||||||    
T  52295704 agagattactttgaagtacctcattttttgattccgagtcgggccctcttctctctttattttctttttatttcagtatttaatttccatct 52295795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 27343756 - 27343566
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||     
T  27343756 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacag 27343657  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||  ||||||||||||||||||||||||| ||| || |||||||    
T  27343656 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttattttctttttatttcagtatttaatttccatct 27343566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 12996476 - 12996666
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |     
T  12996476 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggtag 12996575  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||||||||||||||||||| |||||||| |   |||||||  |||||| |||||||||||||||||| ||| || |||||||    
T  12996576 agaggttactttgaagtacctcattttttattccgagtcagtccctcttctctctttgttttctttttatttcagtatttaatttccatct 12996666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 163 - 320
Target Start/End: Complemental strand, 4523746 - 4523589
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4523746 gtgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 4523647  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
    |||| |||||||||||||||||||||||| |||||||| ||  |||||||| ||||||    
T  4523646 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 4523589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 331
Target Start/End: Complemental strand, 21532369 - 21532203
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||| | |||    
T  21532369 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgacaa 21532270  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttcttttt 331  Q
    | |  ||||||||||||||||||||||| |||| ||| ||  |||| ||  ||||||||||| |||||    
T  21532269 a-agattactttgaagtacctcattttttattctgagtcggacccttttctctctttattttattttt 21532203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 12428543 - 12428418
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||| | | |||||||||  ||||||||||||||| | | |    
T  12428543 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacga 12428444  T
Q  264 agaagttactttgaagtacctcattt 289  Q
    |||  |||||||||||||||||||||    
T  12428443 agagtttactttgaagtacctcattt 12428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 290
Target Start/End: Original strand, 33188766 - 33188891
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||||||||||||||||||  | |||||||||||||||||||||||||||  ||||    
T  33188766 tgtcataccccaaattttgacaactttt-tctatttttatcctttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttcagcaa 33188864  T
Q  264 agaagttactttgaagtacctcatttt 290  Q
      | ||||||||||| |||||||||||    
T  33188865 gaaggttactttgaattacctcatttt 33188891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 10638328 - 10638400
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaatttt 237  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||    
T  10638328 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgta-ttttaaagtcgggaatttt 10638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 354
Target Start/End: Original strand, 10638410 - 10638496
Alignment:
Q  268 gttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||   ||||||||||||||||||||||||| ||| || |||||||    
T  10638410 gttactttgaagtacctcattttttattccgagtcggaccctctcctctctttattttctttttatttcagtatttaatttccatct 10638496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 289
Target Start/End: Original strand, 3424328 - 3424454
Alignment:
Q  161 gtgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgg 260  Q
    ||||||||||||||||||||||| || |||| |||| | |||||| |||||||  || ||| |||| |  |||  ||||||||| |||||||||||| ||    
T  3424328 gtgtgtcataccccaaattttgatcatttttctctaattttaccccttttattcttactttaaaagccaagaaagttcgtcgttccagacgaaatttcgg 3424427  T
Q  261 caaagaagttactttgaagtacctcattt 289  Q
    |  ||| ||||||||||||||||||||||    
T  3424428 c--agaggttactttgaagtacctcattt 3424454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 12402907 - 12402950
Alignment:
Q  219 ttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  12402907 ttttaaagtcaggaattttcgtcgtttcagacgaaatttcggca 12402950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 10814330 - 10814385
Alignment:
Q  280 tacctcatttttgattccgagccgagccctctttcctctttattttctttttattt 335  Q
    |||||||||||| |||||||| |   ||||||| ||||||||||||||||||||||    
T  10814330 tacctcattttttattccgagtcagaccctcttccctctttattttctttttattt 10814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 6e-65; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 163 - 320
Target Start/End: Original strand, 31539953 - 31540110
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31539953 gtgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 31540052  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
    | || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  31540053 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 31540110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 31548523 - 31548679
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548523 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 31548622  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  31548623 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 31548679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 163 - 354
Target Start/End: Complemental strand, 41746759 - 41746567
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc- 261  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||     
T  41746759 gtgtcatatcccaaattttgaccacttttatctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggca 41746660  T
Q  262 aaagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||| |||||||||||||||||||||||| |||||||| || ||||||||  ||||||||||||||||||||| ||||||| || |||||||    
T  41746659 aaagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttatttgagtgtttaatttccatct 41746567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 35104129 - 35103973
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35104129 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaa 35104030  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  35104029 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 35103973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 3432955 - 3432787
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3432955 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 3432856  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt--attttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| ||||||  ||||||||||    
T  3432855 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttttaattttctttt 3432787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 32137819 - 32137644
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||| ||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||    
T  32137819 tgtcttaccccaaattttgatcacttttctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaa 32137720  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagt 339  Q
    | |||||||||||||||||||||||||| |||||||| || ||||||||  ||||||||||||| |||||||||||    
T  32137719 ataagttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttcagt 32137644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 5875484 - 5875329
Alignment:
Q  4 ctcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagcttaga 103  Q
    |||||||||| |||||||||||||||||| ||||||| |    |||||||||||||||||||| |||  |||||  ||||||||||  ||||| ||||||    
T  5875484 ctcaaagggatgtgggatgaagctgagaaatatctatct----ggattcacaaaagttgaagataacagtcactccaccaaaatattctttgaacttaga 5875389  T
Q  104 aaacaaaaatatctttaggcagtgggcaggtatttaagaattttatgctctatatatgtg 163  Q
    || |||||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||    
T  5875388 aagcaaaaatatcttgaggcattggtcaggtagttaagaattttatgctctatatatgtg 5875329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 5879373 - 5879218
Alignment:
Q  4 ctcaaagggaagtgggatgaagctgagaagtatctatatatcaggattcacaaaagttgaagacaacgatcactaaaccaaaatatattttgagcttaga 103  Q
    |||||||||| |||||||||||||||||| ||||||  |    ||||||||||||||||||||||||| |||||  ||||||||||  ||||| ||||||    
T  5879373 ctcaaagggatgtgggatgaagctgagaaatatctaact----ggattcacaaaagttgaagacaacggtcactccaccaaaatattctttgaacttaga 5879278  T
Q  104 aaacaaaaatatctttaggcagtgggcaggtatttaagaattttatgctctatatatgtg 163  Q
    || |||||||||||| ||||| ||| |||||| ||||||||||||||||| |||||||||    
T  5879277 aagcaaaaatatcttgaggcattggacaggtagttaagaattttatgctcaatatatgtg 5879218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 29221553 - 29221429
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||||| |||||||||||||||| ||||||||   ||||||||||||||| ||||     
T  29221553 tgtcataccccaaattttgactacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggcag 29221454  T
Q  264 agaagttactttgaagtacctcattt 289  Q
    || || || |||||| ||||||||||    
T  29221453 ag-aggtattttgaaatacctcattt 29221429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 44320257 - 44320132
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||  || |||||||||||||| ||||||| || | || |||   |||||||||||||||||||||  |||     
T  44320257 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcag 44320158  T
Q  264 agaagttactttgaagtacctcattt 289  Q
     || |||||||  |||||||||||||    
T  44320157 ggaggttacttgaaagtacctcattt 44320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 289
Target Start/End: Original strand, 28457556 - 28457681
Alignment:
Q  166 tcataccccaaattttgaccacttttatc-tattcttacccattttattt-gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||| || | || ||||||||||||||| ||||||| || | |  |||   ||||||||||||||||||||| | ||     
T  28457556 tcataccccaaattttgaccacttttctcgtttttttacccattttattttgtattttaaacgccaagaaggatcgtcgtttcagacgaaatttcgacag 28457655  T
Q  264 agaagttactttgaagtacctcattt 289  Q
    ||| ||||||||||||||| ||||||    
T  28457656 agaggttactttgaagtacatcattt 28457681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 21498964 - 21498865
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||  || ||| |||||||  ||| ||| | |||||||| ||||||||||| ||||    
T  21498964 gtgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 21498865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 13450139 - 13450213
Alignment:
Q  280 tacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||||||||||||||||||| || || |||||  ||||||||||||||||||||||||| ||| || |||||||    
T  13450139 tacctcatttttgattccgagtcgggctctcttctctctttattttctttttatttcagtatttaatttccatct 13450213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 51058450 - 51058360
Alignment:
Q  166 tcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    |||||||||||||||||| ||||||| | | |||| |  ||||||||| ||||||||||||  |||||||||||| |||||| |||||||||    
T  51058450 tcataccccaaattttgatcacttttctttgttct-attcattttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaattt 51058360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 8241520 - 8241438
Alignment:
Q  207 ttttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcattt 289  Q
    ||||||||||||||| || | |  |||  |||||||||||||||||||||| || | ||| |||||||| |||||||||||||    
T  8241520 ttttatttgtattttaaatgccaagaaagttcgtcgtttcagacgaaatttcggtagagaggttactttaaagtacctcattt 8241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 20314092 - 20314058
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctatt 198  Q
    |||||||||||||||||||||||||||| ||||||    
T  20314092 tgtcataccccaaattttgaccacttttttctatt 20314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 13462775 - 13462819
Alignment:
Q  243 tttcagacgaaattttggcaaagaagttactttgaagtacctcat 287  Q
    ||||||||||||||| |  ||||| ||||||||||||||||||||    
T  13462775 tttcagacgaaatttggataaagaggttactttgaagtacctcat 13462819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 3e-64; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 24956911 - 24956755
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24956911 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 24956812  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  24956811 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 24956755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 24965374 - 24965218
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24965374 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 24965275  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  24965274 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 24965218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 20372978 - 20372788
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||     
T  20372978 tgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacag 20372879  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||||||||||||||||||| |||||||| ||| |||||||  ||| ||||||||| ||||||||| | ||| || |||||||    
T  20372878 agaggttactttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttcattatttaatttccatct 20372788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 20398700 - 20398510
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||     
T  20398700 tgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacag 20398601  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||||||||||||||||||| |||||||| ||| |||||||  ||| ||||||||| ||||||||| | ||| || |||||||    
T  20398600 agaggttactttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttcattatttaatttccatct 20398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 337
Target Start/End: Complemental strand, 23350141 - 23349968
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  23350141 tgtcataccccaaattttgaccatttttctctatttttacccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggcaa 23350042  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttca 337  Q
    ||| |||||||||||||||||||||||| |||||||| || ||||||||  ||||||||||||| |||||||||    
T  23350041 agaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttca 23349968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 43598111 - 43597943
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43598111 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43598012  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  43598011 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 43597943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 43603603 - 43603435
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43603603 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43603504  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  43603503 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 43603435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 43609095 - 43608927
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43609095 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43608996  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  43608995 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 43608927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 29186343 - 29186168
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  29186343 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 29186244  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagt 339  Q
    ||| ||||||||||||| |||||||||| |||||||| ||  |||| ||  ||||||||||| |||||||||||||    
T  29186243 agaggttactttgaagtgcctcattttttattccgagtcggacccttttctctctttattttatttttatttcagt 29186168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 1728224 - 1728056
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  1728224 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttgacaa 1728125  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  1728124 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 1728056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 28843940 - 28844108
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  28843940 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 28844039  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  28844040 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 28844108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 28852550 - 28852718
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  28852550 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 28852649  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  28852650 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 28852718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 164 - 352
Target Start/End: Original strand, 31410890 - 31411078
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||  |||||||||||||||| | ||||||||| | |||    
T  31410890 tgtcataccccaaattttgaccacatttctctattctaacccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaa 31410989  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccat 352  Q
    ||| |||||||||||||||||||||||| ||||  || || ||||||||  |||||||| |||||||||||||||| ||| || |||||    
T  31410990 agaggttactttgaagtacctcattttttattctcagtcgggccctcttctctctttatcttctttttatttcagtatttaatttccat 31411078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 31421789 - 31421980
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||| | |||    
T  31421789 tgtcatacccaaaattttgaccacttttctctattcttacccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaa 31421888  T
Q  264 agaagttactttgaagtacctcatttttg-attccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| ||||||||||||||||||||||||| || || || |   |||||||  ||||||||||||||||||| ||||| ||| || |||||||    
T  31421889 agatgttactttgaagtacctcatttttgaatgccaagtctgaccctcttctctctttattttctttttatatcagtatttaatttccatct 31421980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 19223555 - 19223646
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaat 255  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  19223555 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaat 19223646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 41099843 - 41099748
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||  || ||| |||||||  ||| ||| | |||||||| |||||||||||    
T  41099843 tgtgccataccccaaattttgaccacttttatctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaattt 41099748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 21929236 - 21929360
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    ||||||||||||||||||||| | |||| ||  || |||||||||||||||||| ||| ||   ||  ||   |||||||||||||| ||| |||||||     
T  21929236 tgtcataccccaaattttgacaatttttctcgctttttacccattttatttgtactttaaactccgaaaaggatcgtcgtttcagac-aaaatttggcag 21929334  T
Q  264 agaagttactttgaagtacctcattt 289  Q
     || ||||||||||||||||||||||    
T  21929335 ggaggttactttgaagtacctcattt 21929360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 40014981 - 40015057
Alignment:
Q  280 tacctcatttttgattccgagccgagccctcttt--cctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||||||||||||||||||| || |||||||||   ||||||||||||||||||||||| | ||| || |||||||    
T  40014981 tacctcatttttgattccgagtcgggccctcttttctctctttattttctttttatttcattatttaatttccatct 40015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 23028053 - 23028007
Alignment:
Q  243 tttcagacgaaattttggcaaagaagttactttgaagtacctcattt 289  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  23028053 tttcagacgaaatttcggcagagaggttactttgaagtacctcattt 23028007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 23037923 - 23037969
Alignment:
Q  242 gtttcagacgaaattttggcaaagaagttactttgaagtacctcatt 288  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||    
T  23037923 gtttcagacgaaatttcggcagagaggttactttgaagtacctcatt 23037969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 14582925 - 14583081
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14582925 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 14583024  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  14583025 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 14583081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 15944622 - 15944466
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15944622 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 15944523  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  15944522 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 15944466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 15953137 - 15952981
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15953137 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 15953038  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  15953037 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 15952981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 35138593 - 35138749
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138593 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 35138692  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  35138693 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 35138749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 35146929 - 35147085
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35146929 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 35147028  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  35147029 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 35147085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 41233909 - 41233753
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41233909 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 41233810  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  41233809 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 41233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 164 - 320
Target Start/End: Complemental strand, 38168422 - 38168266
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38168422 tgtcatactccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 38168323  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctcttt 320  Q
     || ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  38168322 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 38168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 162 - 330
Target Start/End: Complemental strand, 42574620 - 42574450
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||    
T  42574620 tgtgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggc 42574521  T
Q  262 aaagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  42574520 aaagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 42574450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 330
Target Start/End: Complemental strand, 42565994 - 42565826
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  42565994 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 42565895  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctc--tttattttctttt 330  Q
    ||| |||||||||||||||||||||||| |||||||| ||  |||||||| |||  |||||||||||||    
T  42565894 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctctttttattttctttt 42565826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 193 - 354
Target Start/End: Original strand, 35037885 - 35038046
Alignment:
Q  193 tctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttttg 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |  | ||| ||||||||||| ||||||||||||     
T  35037885 tctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacctcatttttt 35037984  T
Q  293 attccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||||||| |  |||||||| |||||||||||||||||||||||||| ||| || |||||||    
T  35037985 attccgagtcaggccctcttccctctttattttctttttatttcagtatttaatttccatct 35038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 20621518 - 20621650
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| |||||| | |||    
T  20621518 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgacaa 20621617  T
Q  264 agaagttactttgaagtacctcatttttgattc 296  Q
    ||| |||||||||||||||||||||||| ||||    
T  20621618 agatgttactttgaagtacctcattttttattc 20621650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 20372388 - 20372252
Alignment:
Q  154 tatatatgtgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaa 253  Q
    ||||||| | |||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  20372388 tatatatatatgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaa 20372289  T
Q  254 attttggcaaagaagttactttgaagtacctcattttt 291  Q
    |||| | |||| | ||||||||||||||||||||||||    
T  20372288 atttcgacaaa-aggttactttgaagtacctcattttt 20372252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 17687465 - 17687358
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  17687465 tgtgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggc 17687366  T
Q  262 aaagaagt 269  Q
    | ||||||    
T  17687365 agagaagt 17687358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 25483601 - 25483692
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaat 255  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25483601 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaat 25483692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 25491207 - 25491298
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaat 255  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25491207 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaat 25491298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 44372705 - 44372814
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  44372705 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaa 44372804  T
Q  264 agaagttact 273  Q
    ||| ||||||    
T  44372805 agaggttact 44372814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 44388616 - 44388725
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  44388616 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaa 44388715  T
Q  264 agaagttact 273  Q
    ||| ||||||    
T  44388716 agaggttact 44388725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 289
Target Start/End: Original strand, 35303736 - 35303862
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||||| | |||| |||  | |||||| |||||||  |||||| |||| |  ||| ||||||||||||||||||||||| ||||    
T  35303736 gtgtcataccccaaattttgactatttttctctgattttaccccttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggca 35303835  T
Q  263 aagaagttactttgaagtacctcattt 289  Q
     ||| |||| |||||||||||||||||    
T  35303836 gagaggttaatttgaagtacctcattt 35303862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 17687357 - 17687296
Alignment:
Q  293 attccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  17687357 attccgagccgggccctctttcctctttattttctttttatttcagtgtttaatttccatct 17687296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 27606709 - 27606612
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||| |||||||||||| |||||| |||||| ||| | |||||||| ||| |||||||| |||||||||| ||||| ||||||||||||| ||||    
T  27606709 tgtcatactccaaattttgactacttttctctatttttatcaattttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttcggca 27606612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 24285695 - 24285789
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    ||||||||||||||||||||||||||||| | |||| |||| |||||| || ||| |||||||   || ||||| |||||||| |||||||||||    
T  24285695 gtgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaactggaaatttccgtcgtttaagacgaaattt 24285789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 42249520 - 42249422
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||  || ||| ||||||| |||  ||| | |||||||| ||||||||||| ||||    
T  42249520 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaatcgaaaatgtccgtcgttttagacgaaatttcggca 42249422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 34070670 - 34070571
Alignment:
Q  163 gtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    ||||||||||||||||||||| ||||||| |||||| |||| |||||| || ||| |||||||  ||| ||| | |||||||| |||| |||||| ||||    
T  34070670 gtgtcataccccaaattttgatcacttttctctatttttacacattttgttcgtacttttaaaaccggtaatgtccgtcgttttagacaaaatttcggca 34070571  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 21322875 - 21322784
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacc-cattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaatt 256  Q
    |||||||||||||||||||||||||||| ||||||  ||||  |||||||| |||||||||||  |  ||||||||||  ||||||||||||||    
T  21322875 tgtcataccccaaattttgaccactttt-tctatttgtaccaaattttattcgtatttttaaa-accagaattttcgttatttcagacgaaatt 21322784  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 24292372 - 24292433
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaa 225  Q
    |||||||||||||||||||||||||||| | |||| |||| |||||| || ||| |||||||    
T  24292372 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaa 24292433  T

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Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 18989384 - 18989312
Alignment:
Q  218 tttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    ||||||||| |||||||||| ||||  ||||||||||||  || | ||| |||||||| ||||||||||||||    
T  18989384 tttttaaagccgggaatttttgtcgcatcagacgaaattacggtagagaggttactttcaagtacctcatttt 18989312  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 26903396 - 26903300
Alignment:
Q  166 tcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||| ||||||||||||||||| |||||| |||| |||||| || ||| |||||||  ||  ||| | | |||||| ||||||||||| ||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccgaaaatgtccatcgttttagacgaaatttcggca 26903300  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 11873790 - 11873866
Alignment:
Q  280 tacctcatttttgattccgagccgagccctctttcctct--ttattttctttttatttcagtgtttgatgtccatct 354  Q
    |||||||||||| |||||||| ||  |||||||| ||||  ||||||||||||||||||| | ||| || |||||||    
T  11873790 tacctcatttttcattccgagtcggaccctcttttctctctttattttctttttatttcattatttaatttccatct 11873866  T

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Target: scaffold0497 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 10993 - 11182
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||     
T  10993 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 11092  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| ||||||||||||||||||| ||||||||||||  || ||||||||  ||||||||||||||||||||||||| ||| || |||||||    
T  11093 agaggttactttgaagtacctca-ttttgattccgaatcgggccctcttctctctttattttctttttatttcagtatttaatttccatct 11182  T

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Target: scaffold0111 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 33035 - 33225
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33035 tgtcataccccaaattttgaccacttttctctattcttacccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaa 33134  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||| |||||||| ||||||||||||||| |||||||| ||  |||||||   |||||||||||| ||||||||| ||||| || |||||||    
T  33135 agaggttactttaaagtacctcattttttattccgagtcggaccctcttctttctttattttctctttatttcattgtttaatttccatct 33225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 23464 - 23655
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttt-taaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||||| || |    
T  23464 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggta 23563  T
Q  263 aagaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
     ||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||| ||| ||| || |||||||    
T  23564 gagaggttactttgaagtacctcatttttgattccgagtcgggccctcttccctctttgttttctttttatttaagtatttaatttccatct 23655  T

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Target: scaffold0173 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 335
Target Start/End: Complemental strand, 994 - 823
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||     
T  994 tgtcataccccaaattttgaccagctttctctattcttacccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggcag 895  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttattt 335  Q
    | | ||||||||||| ||||||||||||||||||||| || ||||||||  |||||||||||||||||||||    
T  894 aaaggttactttgaaatacctcatttttgattccgagtcgggccctcttctctctttattttctttttattt 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 121228 - 121375
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |     
T  121228 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtag 121327  T
Q  264 agaagttactttgaagtacctcatttttgattccgagccgagccctct 311  Q
    ||| ||||||||||||||  ||||||||||||||||| ||||||||||    
T  121328 agaggttactttgaagtaaatcatttttgattccgagtcgagccctct 121375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 149 - 13
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  149 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 50  T
Q  264 agaagttactttgaagtacctcatttttgattccgag 300  Q
    ||| |||||||||||||||||||||||| ||||||||    
T  49 agaggttactttgaagtacctcattttttattccgag 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 164 - 353
Target Start/End: Original strand, 4390 - 4580
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||   |||| |||||||||||||||||||||  ||||||||||||||| ||||||| |||||||||||||||||| | ||     
T  4390 tgtcataccccaaattttgacattttttctctattcttacccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacag 4489  T
Q  264 agaagttactttgaagtacctca-tttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatc 353  Q
    ||| ||||||||||||||||||| ||||| |||||||| || ||||||||  ||||||||||||||||||||||||| ||| || ||||||    
T  4490 agaggttactttgaagtacctcatttttttattccgagtcgggccctcttctctctttattttctttttatttcagtatttaatttccatc 4580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 15813 - 15970
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||     
T  15813 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 15912  T
Q  264 agaagttactttgaagtacctca-tttttgattccgagccgagccctctttcctcttt 320  Q
    ||| ||||||||||||||||||| ||||||||||| || |  ||||||||| ||||||    
T  15913 agaggttactttgaagtacctcattttttgattccaagtcaggccctcttttctcttt 15970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 7257 - 7129
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||| ||||||||||||||||| ||| || |||||||||||||||||| |||||||| || |||||||||| |||||||||||||||| ||     
T  7257 tgtgtcataccctaaattttgaccacttttctctgtttttacccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggg 7158  T
Q  262 aaagaagttactttgaagtacctcatttt 290  Q
    |   | |||||||||||||||||||||||    
T  7157 aggaaggttactttgaagtacctcatttt 7129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 40898 - 40787
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| | |||||| |||||||||||||||| | | |||    
T  40898 tgtcataccccaaattttgaccacttttctctattcttatccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaatctcgacaa 40799  T
Q  264 agaagttacttt 275  Q
    ||| ||||||||    
T  40798 agaggttacttt 40787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 139 - 264
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 263  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||| | | |||||||||  ||||||||||||||| | | |    
T  139 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacga 238  T
Q  264 agaagttactttgaagtacctcattt 289  Q
    |||  |||||||||||||||||||||    
T  239 agagtttactttgaagtacctcattt 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 162 - 289
Target Start/End: Complemental strand, 20549 - 20422
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||||||||||||||||||||| | |  | |||| |||||| || ||| |||||||| || |||||||||| |||||||||||||||| |||    
T  20549 tgtgtcataccccaaattttgaccacttttctatggttttacacattttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggc 20450  T
Q  262 aaagaagttactttgaagtacctcattt 289  Q
    | ||| ||||||||| ||||||||||||    
T  20449 agagaggttactttggagtacctcattt 20422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 440 - 338
Alignment:
Q  162 tgtgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 261  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||||| || ||| |||||||  ||| ||| | | |||||| |||||||||||||||    
T  440 tgtgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaattttggc 341  T
Q  262 aaa 264  Q
    |||    
T  340 aaa 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 65701 - 65593
Alignment:
Q  232 aattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcat-ttttgattccgagccgagccctctttcctctttattttctttt 330  Q
    ||||||||| ||||| |||||||||| | |||||| |||||||||||||||||||| |||| |||||||| ||  |||| ||  ||||||||||| ||||    
T  65701 aattttcgttgtttcggacgaaatttcgacaaagatgttactttgaagtacctcatttttttattccgagtcggacccttttctctctttattttatttt 65602  T
Q  331 tatttcagt 339  Q
    |||||||||    
T  65601 tatttcagt 65593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 81851 - 81753
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||| ||||||||||||||||| |||||| |||| |||||| || ||| |||||||  ||| ||| | |||||||| ||||||||||||||||    
T  81851 tgtcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaattttggca 81753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 65603 - 65505
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||  ||||||| |||||| |||| |||||| || ||| |||||||  ||| ||| | |||||||| ||||||||||| ||||    
T  65603 tgtcataccccaaattttgtacacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 65505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 7694 - 7622
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgta-tttttaaagtcgggaattt 236  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||| |||||||    
T  7694 tgtcataccccaaattttgaccacttttctctattcttacccatttt-tttgcattttttaaagtcaggaattt 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 7616 - 7547
Alignment:
Q  268 gttactttgaagtacctcatttttgattccgagccgagccctctttcctctttattttctttttatttca 337  Q
    |||||||||||||||||||||||| ||||| || ||| | |||||  ||||||||||||| |||||||||    
T  7616 gttactttgaagtacctcattttttattcctagtcgaactctcttctctctttattttctctttatttca 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 10651 - 10595
Alignment:
Q  234 ttttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||    
T  10651 ttttcgtcgcttcagacgaaatttcggcaaagaggttactttgaagtacctcatttt 10595  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 192528 - 192621
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattt 257  Q
    |||||||||||||||||||||||||||| |||||| ||||  ||||| || ||| |||||||  ||| ||| | |||||||| |||||||||||    
T  192528 tgtcataccccaaattttgaccacttttctctatttttacagattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaattt 192621  T

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Target: scaffold0863 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 437 - 339
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||||||||||||||||||||| | |||| |||| |||||| || ||| |||||||  ||| ||| | | |||||| ||||||||||| ||||    
T  437 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaatttcggca 339  T

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Target: scaffold0545 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0545
Description:

Target: scaffold0545; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 9954 - 9878
Alignment:
Q  280 tacctcat-ttttgattccgagccgagccctctttcctctttatttt-ctttttatttcagtgtttgatgtccatct 354  Q
    |||||||| |||| ||||| ||||| |||||||| |||| ||||||| |||||||||||||||||| ||||||||||    
T  9954 tacctcatatttttattccaagccgggccctcttacctcgttatttttctttttatttcagtgtttaatgtccatct 9878  T

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Target: scaffold0290 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 15832 - 15760
Alignment:
Q  218 tttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    ||||||||| | ||||||||||||| |||||||||||||  || | | | |||||||||||||||||||||||    
T  15832 tttttaaagccaggaattttcgtcgcttcagacgaaattacggtagataggttactttgaagtacctcatttt 15760  T

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Target: scaffold1487 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 801 - 762
Alignment:
Q  171 ccccaaattttgaccacttttatctattcttacccatttt 210  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  801 ccccaaattttgaccacttttctctattcttacccatttt 762  T

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Target: scaffold0514 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 10973 - 10912
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacc-cattttatttgtatttttaaa 225  Q
    |||||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||    
T  10973 tgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 10912  T

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Target: scaffold0389 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 416 - 514
Alignment:
Q  164 tgtcataccccaaattttgaccacttttatctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 262  Q
    |||||||||| ||||||||||||||||| | || | |||| |||||| || ||| |||||||  ||| ||| | |||||||| ||||||||||| ||||    
T  416 tgtcataccctaaattttgaccacttttctttaattttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 514  T

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Target: scaffold0323 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 17669 - 17602
Alignment:
Q  287 tttttgattccgagccgagccctctttcctctttattttctttttatttcagtgtttgatgtccatct 354  Q
    ||||| |||||||| || ||||||||  ||||||||||||||||||||||| | ||| || |||||||    
T  17669 ttttttattccgagtcgggccctcttctctctttattttctttttatttcattatttaatttccatct 17602  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 61041 - 61088
Alignment:
Q  243 tttcagacgaaattttggcaaagaagttactttgaagtacctcatttt 290  Q
    ||||| |||||||||||||||  | |||||||||||||||||||||||    
T  61041 tttcaaacgaaattttggcaagaaggttactttgaagtacctcatttt 61088  T

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Target: scaffold0484 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 11507 - 11457
Alignment:
Q  164 tgtcataccccaaattttgaccacttttat-ctattcttacccattttatt 213  Q
    |||| |||||||||||||||||| |||| | ||||||||||||||||||||    
T  11507 tgtcgtaccccaaattttgaccattttttttctattcttacccattttatt 11457  T

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Target: scaffold0167 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 8084 - 8141
Alignment:
Q  280 tacctcatttttgattccgagccgagccctcttt--cctctttattttctttttattt 335  Q
    |||||||| |||||||||||| || |||||||||   |||||||||||||||||||||    
T  8084 tacctcatctttgattccgagtcgggccctcttttctctctttattttctttttattt 8141  T

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