View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8685_low_6 (Length: 272)
Name: NF8685_low_6
Description: NF8685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8685_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 36567574 - 36567397
Alignment:
| Q |
77 |
tcataatattgtgggtgctatgttttattcgttttaataattattgtttttcttattttcaataaagcannnnnnnnatgtggaagctcttgagagagtt |
176 |
Q |
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| T |
36567574 |
tcataatattgtgggtgcaatgttttattcgttttaataattattgtttttcttattttcaataaagcatttttt--atgtggaagctcttgagagagtt |
36567477 |
T |
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| Q |
177 |
catgatgaatagtaaggaacattcttttctttttcacgctcatcaaatggcagggttgatgttcttgaatgcaacccttg |
256 |
Q |
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| T |
36567476 |
catgatgaatagtaacgaacattcttttctttttcacgctcatcaaatggcagggttgatgttcttgaatgcaacccttg |
36567397 |
T |
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