View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8686_low_17 (Length: 276)
Name: NF8686_low_17
Description: NF8686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8686_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 40751110 - 40750891
Alignment:
| Q |
1 |
ataagtaaggtatattgaaaatttgcagacattcattgaaatttcttgtttctgtgtaatatatagcaactttgatcctttatgatttcactaattaaga |
100 |
Q |
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| T |
40751110 |
ataagtaaggtatattgaaaatttgcagacattcattgaaatttcttgtttctatgtaatatatagcaactttgatcctttatgatttcactaattaaga |
40751011 |
T |
|
| Q |
101 |
acaaaagtggttgcagatatatctatctttcatgtgatagtagtatttattaccattgcatggttgtagactagcttgttgttgtagctataacttctta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40751010 |
acaaaagtggttgcagatatatctatctttcatgtgatagtagtatttattaccattgcatggttgtagactagcttgttgttgtagctataacttctta |
40750911 |
T |
|
| Q |
201 |
attatgaacataattcatgc |
220 |
Q |
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|||||||||||||| ||||| |
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| T |
40750910 |
attatgaacataatccatgc |
40750891 |
T |
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