View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8687_low_8 (Length: 221)
Name: NF8687_low_8
Description: NF8687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8687_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 37373298 - 37373078
Alignment:
| Q |
1 |
gtagatctcgaagtattgatattttggtcacatttgtcacttttgtggctattgtgttattgtatgatattaattttgatgttgtgagcttatctatgga |
100 |
Q |
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| T |
37373298 |
gtagatctcgaagtattgatattttggtcacatttgtcacttttgtggctattgtgttattgtatgatattaattttgatgttgtgagcttatctatgga |
37373199 |
T |
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| Q |
101 |
ccattcttttcatgtcaacaaattcttcataataaataacattttcaaagaaaatagtggaaataaaattcccttgaaggtggaaataaatctacgtgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37373198 |
ccattcttttcatgtcaacaaattcttcataataaataacattttcaaagaaaatagtggaaataaaattcccttgaaggtggaaataaatctacgtgta |
37373099 |
T |
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| Q |
201 |
aactgttgataaacatttctc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
37373098 |
aactgttgataaacatttctc |
37373078 |
T |
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