View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8689_low_10 (Length: 335)
Name: NF8689_low_10
Description: NF8689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8689_low_10 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 12 - 318
Target Start/End: Original strand, 30253792 - 30254098
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30253792 |
ttattctaaacagtaaggatgtcacaatgttatgcaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
30253891 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttcagtggatgt |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30253892 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttcagtggatgt |
30253991 |
T |
|
| Q |
212 |
gcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgaggtgc |
311 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30253992 |
gcttccagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgaggtgc |
30254091 |
T |
|
| Q |
312 |
aaacagt |
318 |
Q |
| |
|
||||||| |
|
|
| T |
30254092 |
aaacagt |
30254098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 12 - 318
Target Start/End: Original strand, 30024771 - 30025080
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| ||||| ||||||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
30024771 |
ttattctgaacagaaaggatgtcaccatgttatgcaatggtcaacttaatgatgagcttatctacagagtaacagctcttcgcctgcgatgtttccatga |
30024870 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtgga |
208 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||| | || ||||||||||||||| | |||||| |||||| |
|
|
| T |
30024871 |
tgaggctgacaaatttccatctggtttcctccaaaagtttatcaatctcataaagcttaaggtgacatgtagttccttcacatacattttctcgagtgga |
30024970 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | |||||||||||||||| |||||||||||||| |||||| || ||| | ||| | |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
30024971 |
agcaaatgcgctggacattctgaaacaactatgaagttgagaaatttagtacttgttcagttagataacctcgagtttatatgtgaagagaaatctgagg |
30025070 |
T |
|
| Q |
309 |
tgcaaacagt |
318 |
Q |
| |
|
||||| |||| |
|
|
| T |
30025071 |
tgcaatcagt |
30025080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 12 - 318
Target Start/End: Complemental strand, 30117351 - 30117042
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| ||||| ||||||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
30117351 |
ttattctgaacagaaaggatgtcaccatgttatgcaatggtcaacttaatgatgagcttatctacagagtaacagctcttcgcctgcgatgtttccatga |
30117252 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtgga |
208 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||| | || ||||||||||||||| | |||||| |||||| |
|
|
| T |
30117251 |
tgaggctgacaaatttccatctggtttcctccaaaagtttatcaatctcataaagcttaaggtgacatgtagttccttcacatacattttctcgagtgga |
30117152 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | |||||||||||||||| |||||||||||||| |||||| || ||| | ||| | |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
30117151 |
agcaaatgcgctggacattctgaaacaactatgaagttgagaaatttagtacttgttcagttagataacctcgagtttatatgtgaagagaaatctgagg |
30117052 |
T |
|
| Q |
309 |
tgcaaacagt |
318 |
Q |
| |
|
||||| |||| |
|
|
| T |
30117051 |
tgcaatcagt |
30117042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 12 - 318
Target Start/End: Complemental strand, 30132108 - 30131799
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| ||||| ||||||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
30132108 |
ttattctgaacagaaaggatgtcaccatgttatgcaatggtcaacttaatgatgagcttatctacagagtaacagctcttcgcctgcgatgtttccatga |
30132009 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtgga |
208 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||| | || ||||||||||||||| | |||||| |||||| |
|
|
| T |
30132008 |
tgaggctgacaaatttccatctggtttcctccaaaagtttatcaatctcataaagcttaaggtgacatgtagttccttcacatacattttctcgagtgga |
30131909 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | |||||||||||||||| |||||||||||||| |||||| || ||| | ||| | |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
30131908 |
agcaaatgcgctggacattctgaaacaactatgaagttgagaaatttagtacttgttcagttagataacctcgagtttatatgtgaagagaaatctgagg |
30131809 |
T |
|
| Q |
309 |
tgcaaacagt |
318 |
Q |
| |
|
||||| |||| |
|
|
| T |
30131808 |
tgcaatcagt |
30131799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 318
Target Start/End: Complemental strand, 30035926 - 30035617
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| |||| ||||||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
30035926 |
ttattctgaacagaaaggatgtcaccatgttatgcaatggtcaacttaatggtgagcttatctacagagtaacagctcttcgcctgcgatgtttccatga |
30035827 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtgga |
208 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||| || |||||| | || ||||||||||||||| | |||||| |||||| |
|
|
| T |
30035826 |
tgaggctgacaaatttccatctggtttcctccaaaagtttatcaatctcataatgcttaaggtgacatgtagttccttcacatacattttctcgagtgga |
30035727 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | | |||||||||||||||| |||||||||||||| |||||| || ||| | ||| | |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
30035726 |
agcgaatgcgctggacattctgaaacaactatgaagttgagaattttagtacttgttcagttagataacctcgagtttatatgtgaagagaaatctgagg |
30035627 |
T |
|
| Q |
309 |
tgcaaacagt |
318 |
Q |
| |
|
||||| |||| |
|
|
| T |
30035626 |
tgcaatcagt |
30035617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 318
Target Start/End: Complemental strand, 30230064 - 30229755
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| |||| ||||||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
30230064 |
ttattctgaacagaaaggatgtcaccatgttatgcaatggtcaacttaatggtgagcttatctacagagtaacagctcttcgcctgcgatgtttccatga |
30229965 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtgga |
208 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||| || |||||| | || ||||||||||||||| | |||||| |||||| |
|
|
| T |
30229964 |
tgaggctgacaaatttccatctggtttcctccaaaagtttatcaatctcataatgcttaaggtgacatgtagttccttcacatacattttctcgagtgga |
30229865 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | | |||||||||||||||| |||||||||||||| |||||| || ||| | ||| | |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
30229864 |
agcgaatgcgctggacattctgaaacaactatgaagttgagaattttagtacttgttcagttagataacctcgagtttatatgtgaagagaaatctgagg |
30229765 |
T |
|
| Q |
309 |
tgcaaacagt |
318 |
Q |
| |
|
||||| |||| |
|
|
| T |
30229764 |
tgcaatcagt |
30229755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 318
Target Start/End: Complemental strand, 30237357 - 30237048
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| ||||| ||||||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
30237357 |
ttattctgaacagaaaggatgtcaccatgttatgcaatggtcaacttaatgatgagcttatctacagagtaacagctcttcgcctgcgatgtttccatga |
30237258 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtgga |
208 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||| | | |||| | || ||||||||||||||| | |||||| |||||| |
|
|
| T |
30237257 |
tgaggctgacaaatttccatctggtttcctccaaaagtttatcaatctcatagagcttattgtgacatgtagttccttcacatacattttctcgagtgga |
30237158 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | | |||||||||||||||| |||||||||||||| |||||| || ||| | ||| | |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
30237157 |
agcgaatgcgctggacattctgaaacaactatgaagttgagaaatttagtacttgttcagttagataacctctagtttatatgtgaagagaaatctgagg |
30237058 |
T |
|
| Q |
309 |
tgcaaacagt |
318 |
Q |
| |
|
||||| |||| |
|
|
| T |
30237057 |
tgcaatcagt |
30237048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 26 - 313
Target Start/End: Original strand, 30069905 - 30070195
Alignment:
| Q |
26 |
aaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaat |
125 |
Q |
| |
|
||||||||| | |||||| ||||||||||| ||| ||||| || ||| |||| ||| ||||| ||||||||||||||||| | ||||||| ||| | |
|
|
| T |
30069905 |
aaggatgtctccatgttacgcaatggtcaacttaatgatgagcttatttacgcggtgaaatctctttgcctacgatgttttcatgacgagtctgtcaagt |
30070004 |
T |
|
| Q |
126 |
ttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc---agtggatgtgcttctagcgg |
222 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||| ||||||||||| | || |||||||||||| || |||||||| |||||| | | || | || |
|
|
| T |
30070005 |
ttccatcaggtttcttgcaaaggtttatcaatctcgaaaaccttaagttgacatgtagttccttctcagagattttctcgagtggaagcgtttgcactgg |
30070104 |
T |
|
| Q |
223 |
acattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgaggtgcaa |
313 |
Q |
| |
|
||||| | |||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||| | |||| |||||||||| |
|
|
| T |
30070105 |
acattataaaacaagtatgaagttgagaagtttagtactcagtaacttacacaaccttgagtttatatgtgatgtcaaatctgaggtgcaa |
30070195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 313
Target Start/End: Complemental strand, 30182479 - 30182175
Alignment:
| Q |
12 |
ttattctaaacagtaaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataa |
111 |
Q |
| |
|
||||||| ||||| ||||||||||| ||| || ||||||||| | ||| ||||| ||| |||| |||| ||||||| || | ||||||||||| | |
|
|
| T |
30182479 |
ttattctgaacagcaaggatgtcaccatggcatgcaatggtcaccttaatgatgagcttatcaacacagtaacagctctttgcttgcgatgttttcacga |
30182380 |
T |
|
| Q |
112 |
tgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagatttt---cagtgga |
208 |
Q |
| |
|
|| |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||| | || ||||||||||||||| | || || | |||| |
|
|
| T |
30182379 |
tgtgtctgaaaagtttccatctggtttcctccaaaggttcatcaatctcaaaaaccttaaggtgacatgtagttccttcacatatatatttgcaaatgga |
30182280 |
T |
|
| Q |
209 |
tgtgcttctagcggacattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgagg |
308 |
Q |
| |
|
| | | | | |||||||||||||||||||||||||| ||||||||| ||| ||| ||||| |||||| | ||||| | ||||||||||||||||| |
|
|
| T |
30182279 |
agcgaatgcaccagacattctgaaacaattatgaagttgggaagtttagaactcattatgttacaaaacctcgaatttatatttgaagagaaatttgagg |
30182180 |
T |
|
| Q |
309 |
tgcaa |
313 |
Q |
| |
|
||||| |
|
|
| T |
30182179 |
tgcaa |
30182175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 26 - 312
Target Start/End: Original strand, 30281377 - 30281666
Alignment:
| Q |
26 |
aaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaat |
125 |
Q |
| |
|
||||||||||| ||||||| || ||| ||| ||| ||| | | ||||||| || |||||||||||| | |||||||||||| |||| |||| ||||| |
|
|
| T |
30281377 |
aaggatgtcaccatgttatgcagcggtgaacttaatgatgggcctatctacaaagtgaaagctcttcgcttgcgatgttttcatgatgaatctgtcaaat |
30281476 |
T |
|
| Q |
126 |
ttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcac--aaagattttc-agtggatgtgcttctagcgg |
222 |
Q |
| |
|
|| || | |||||||| ||||| |||||||||||||||||||||||| | || |||||||||||||| | | |||||| |||||| | | | | || |
|
|
| T |
30281477 |
tttcaactggtttccttcaaagatttatcaatctcaaaaaccttaaggtgacatgtagttccttcacatatatattttcgagtggaagcgaatggactgg |
30281576 |
T |
|
| Q |
223 |
acattctgaaacaattatgaagttgagaagtttagtgctcgttaacttacacaacctcaagtttatttgtgaagagaaatttgaggtgca |
312 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||| |||| ||||| |||||| | ||||| ||||||||||| ||||||||||| |
|
|
| T |
30281577 |
acattctgaaacaattatgaagttggaaagtttagaactcattaagttacaaaacctcgaatttatatgtgaagagaattttgaggtgca |
30281666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 30176679 - 30176855
Alignment:
| Q |
26 |
aaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaat |
125 |
Q |
| |
|
||||||||||| ||||||| | ||||||| ||| || ||| | |||||||| || ||||||||||| || |||||||||||| | |||||||| || | |
|
|
| T |
30176679 |
aaggatgtcaccatgttatgtagcggtcaacttaataacgagtctatctacacagtgaaagctcttcgtctgcgatgttttcatgacgagtctgagaagt |
30176778 |
T |
|
| Q |
126 |
ttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataacttgtagttccttcacaaagattttc |
202 |
Q |
| |
|
||||| | |||||||||||||| ||||||||||| |||| ||||| | |||||||||| ||||| |||||||| |
|
|
| T |
30176779 |
ttccaactggtttcctccaaagatttatcaatcttgaaaatcttaaagtgtcttgtagttctttcactgagattttc |
30176855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 30792423 - 30792551
Alignment:
| Q |
26 |
aaggatgtcacaatgttatccaatggtcaacataacaatgagacaatctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaat |
125 |
Q |
| |
|
||||| ||||| ||||||| ||| ||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||| | | |||| |||| |
|
|
| T |
30792423 |
aaggacgtcaccatgttatgcaacggtcaacttaatgatgagctgatctacacagtaaaagctcttcgcctacgatgttttcatgacacgactgaaaaat |
30792522 |
T |
|
| Q |
126 |
ttccatcaggtttcctccaaaggtttatc |
154 |
Q |
| |
|
||||||| |||||||||||||| |||||| |
|
|
| T |
30792523 |
ttccatctggtttcctccaaagatttatc |
30792551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 30031819 - 30031941
Alignment:
| Q |
80 |
gtaaaagctcttcgcctacgatgttttcataatgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataactt |
179 |
Q |
| |
|
||||||| ||||||| | || |||||||| ||||||||||| | |||||||| | ||||||||||| ||||||||||| |||| |||| | | |||| |
|
|
| T |
30031819 |
gtaaaagatcttcgcttgcgttgttttcacaatgagtctgaaatatttccatacagcttcctccaaagatttatcaatcttgaaaaacttatggtgactt |
30031918 |
T |
|
| Q |
180 |
gtagttccttcacaaagattttc |
202 |
Q |
| |
|
| |||||||||||| | |||||| |
|
|
| T |
30031919 |
gcagttccttcacagaaattttc |
30031941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 30225957 - 30226079
Alignment:
| Q |
80 |
gtaaaagctcttcgcctacgatgttttcataatgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaaccttaagataactt |
179 |
Q |
| |
|
||||||| ||||||| | || |||||||| ||||||||||| | |||||||| | ||||||||||| ||||||||||| |||| |||| | | |||| |
|
|
| T |
30225957 |
gtaaaagatcttcgcttgcgttgttttcacaatgagtctgaaatatttccatacagcttcctccaaagatttatcaatcttgaaaaacttatggtgactt |
30226056 |
T |
|
| Q |
180 |
gtagttccttcacaaagattttc |
202 |
Q |
| |
|
| |||||||||||| | |||||| |
|
|
| T |
30226057 |
gcagttccttcacagaaattttc |
30226079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 30092506 - 30092637
Alignment:
| Q |
71 |
atctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaacctta |
170 |
Q |
| |
|
||||| || ||||||| ||||||| | || |||||||| ||||||||||| | ||||||| | ||||||||||| ||||||||||| |||| |||| |
|
|
| T |
30092506 |
atctatacagtaaaagatcttcgcttgcgttgttttcacaatgagtctgaaatatttccacacagcttcctccaaagatttatcaatcttgaaaaactta |
30092605 |
T |
|
| Q |
171 |
agataacttgtagttccttcacaaagattttc |
202 |
Q |
| |
|
| | ||||| |||||||||||| | |||||| |
|
|
| T |
30092606 |
tggtgacttgcagttccttcacagaaattttc |
30092637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 30114359 - 30114490
Alignment:
| Q |
71 |
atctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaacctta |
170 |
Q |
| |
|
||||| || ||||||| ||||||| | || |||||||| ||||||||||| | ||||||| | ||||||||||| ||||||||||| |||| |||| |
|
|
| T |
30114359 |
atctatacagtaaaagatcttcgcttgcgttgttttcacaatgagtctgaaatatttccacacagcttcctccaaagatttatcaatcttgaaaaactta |
30114458 |
T |
|
| Q |
171 |
agataacttgtagttccttcacaaagattttc |
202 |
Q |
| |
|
| | ||||| |||||||||||| | |||||| |
|
|
| T |
30114459 |
tggtgacttgcagttccttcacagaaattttc |
30114490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 30129111 - 30129242
Alignment:
| Q |
71 |
atctacacggtaaaagctcttcgcctacgatgttttcataatgagtctgacaaatttccatcaggtttcctccaaaggtttatcaatctcaaaaacctta |
170 |
Q |
| |
|
||||| || ||||||| ||||||| | || |||||||| ||||||||||| | ||||||| | ||||||||||| ||||||||||| |||| |||| |
|
|
| T |
30129111 |
atctatacagtaaaagatcttcgcttgcgttgttttcacaatgagtctgaaatatttccacacagcttcctccaaagatttatcaatcttgaaaaactta |
30129210 |
T |
|
| Q |
171 |
agataacttgtagttccttcacaaagattttc |
202 |
Q |
| |
|
| | ||||| |||||||||||| | |||||| |
|
|
| T |
30129211 |
tggtgacttgcagttccttcacagaaattttc |
30129242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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