View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8690_2 (Length: 511)

Name: NF8690_2
Description: NF8690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8690_2
NF8690_2
[»] chr7 (5 HSPs)
chr7 (19-491)||(6680512-6680984)
chr7 (19-114)||(8048763-8048856)
chr7 (19-128)||(12220060-12220166)
chr7 (19-122)||(5930112-5930212)
chr7 (21-120)||(48647424-48647521)
[»] scaffold0039 (2 HSPs)
scaffold0039 (19-118)||(79662-79759)
scaffold0039 (19-56)||(79180-79217)
[»] chr4 (5 HSPs)
chr4 (19-138)||(4703196-4703313)
chr4 (26-120)||(53770378-53770470)
chr4 (19-104)||(19050299-19050382)
chr4 (19-122)||(39868965-39869064)
chr4 (26-115)||(48740006-48740093)
[»] chr1 (4 HSPs)
chr1 (19-120)||(9341004-9341103)
chr1 (19-120)||(9339691-9339790)
chr1 (26-114)||(5782465-5782551)
chr1 (57-129)||(7945569-7945641)
[»] chr2 (3 HSPs)
chr2 (19-114)||(17466807-17466900)
chr2 (57-129)||(15441986-15442058)
chr2 (21-104)||(33161828-33161909)
[»] chr8 (5 HSPs)
chr8 (19-128)||(5965421-5965528)
chr8 (60-129)||(41121145-41121214)
chr8 (19-122)||(28619032-28619133)
chr8 (19-113)||(5738002-5738094)
chr8 (36-115)||(28619541-28619618)
[»] chr5 (2 HSPs)
chr5 (26-114)||(16611779-16611865)
chr5 (19-114)||(9537074-9537166)
[»] chr6 (1 HSPs)
chr6 (86-166)||(23507948-23508027)


Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 19 - 491
Target Start/End: Original strand, 6680512 - 6680984
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtattt-aattctgagtcaggaa 117  Q
    |||||| ||||||| ||||||||||||| |||||||||  |||||||||||| |||| |||| |||||||||||||||||||| |||||||||||| |||    
T  6680512 acatcagcacttaacagaattatttaacatcaaagact--aaagtgataatagaagtgcataatcgaagatttctttgtattttaattctgagtcaagaa 6680609  T
Q  118 cctttatgacagtgaaatgtaagatcagagattaacgtgactatttgctttnnnnnnnnnn----ctggctccatccaaatattttcatttcaactttat 213  Q
    |||||| |||   ||| ||||||||| |||| ||| ||||||||||||||               ||||||||||| |||||||||||||||||||||||    
T  6680610 cctttacgac---gaagtgtaagatcggagactaaggtgactatttgcttaaaaaaaaaaaaaaactggctccatc-aaatattttcatttcaactttat 6680705  T
Q  214 tc-aaaactatttagaatcttccatcttccaaccaaagtatcatcataagtcataaccatccaactgtgcaaacacaagaaggtgcatagaattattaaa 312  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6680706 tccaaaactatttagaatcttccatcttccaaccaaagtatcatcataagtcataaccatccaactgtgcaaacacaagaaggtgcatagaattattaaa 6680805  T
Q  313 cctttatcgcaccgtaaaatttctctttatccttatccagcgcgcaccacttcaacatctctcaccgtcatgtcgccggaaacacacttgccgccgccgg 412  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6680806 cctttaccgcaccgtaaaatttctctttatccttatccggcgcgcaccacttcaacatctctcaccgtcatgtcgccggaaacacacttgccgccgccgg 6680905  T
Q  413 aacctccgatcatatccttaccggaaatcgcaccagaaacaacggcggcgcaagaaaacgccgatatccccgctcctcc 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6680906 aacctccgatcatatccttaccggaaatcgcaccagaaacaacggcggcgcaagaaaacgccgatatccccgctcctcc 6680984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 8048763 - 8048856
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcag 114  Q
    |||||||||||||||||||||||||||||| |||||   |||||||||||   |||| || ||||| ||| |||||||||||||||  ||||||||    
T  8048763 acatcatcacttaatagaattatttaacgttaaaga--ttaaagtgataacggaagtgcagagtcggagacttctttgtatttaatcttgagtcag 8048856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 12220166 - 12220060
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||| | |||||||||||||| ||||  |||||||||||  | |||| || ||||  ||| |||||| ||||||||  |||||||||||     
T  12220166 acatcatcacttaacaaaattatttaacgtc-aaga--ctaaagtgatatcagaagtgcagagtcagagacttctttctatttaatcttgagtcaggaat 12220070  T
Q  119 ctttatgaca 128  Q
    |||| |||||    
T  12220069 ctttgtgaca 12220060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 5930112 - 5930212
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||| |||||||||||| | ||  ||  ||||||||||||   |||| || ||||||| ||||| ||||||||||| |||||| ||| ||    
T  5930112 acatcatcacttaacagaattatttaatggcaggga--ctaaagtgataacggaagtgcacagtcgaaaatttc-ttgtatttaatcctgagttagggac 5930208  T
Q  119 cttt 122  Q
    ||||    
T  5930209 cttt 5930212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 48647424 - 48647521
Alignment:
Q  21 atcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaacct 120  Q
    |||||||||||| ||| || ||||||||||  ||||  |||||||||| |||||| || |||   ||| || |||||||||||| |||||||||| ||||    
T  48647424 atcatcacttaacagatttttttaacgtcagggact--aaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacct 48647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 79662 - 79759
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||||| |||||||||||||||||||  ||||| |||||||| || | || |||| |||| |||||||||||||||  ||||||||||||    
T  79662 acatcatcacttaataaaattatttaacgtcaaaga--ctaaaatgataatagaaatgcagagtcaaagacttctttgtatttaatcatgagtcaggaac 79759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 79217 - 79180
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagact 56  Q
    |||||||||||||| | |||||||||||||||||||||    
T  79217 acatcatcacttaacaaaattatttaacgtcaaagact 79180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 4703196 - 4703313
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    ||||||||||||||||||||||||||| | || |||  ||||||||||||   ||||  | |||| |||| |||||||||||||||||||||| ||| ||    
T  4703196 acatcatcacttaatagaattatttaatgccagaga--ctaaagtgataacggaagtgtacagtcaaagacttctttgtatttaattctgagttagggac 4703293  T
Q  119 ctttatgacagtgaaatgta 138  Q
    || | |||||| || |||||    
T  4703294 ctatgtgacagcgagatgta 4703313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 53770470 - 53770378
Alignment:
Q  26 cacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaacct 120  Q
    ||||||| |||||||||||||| || |||||  | |||||||||  |||| || ||||  ||| |||||||||||||||||||||||||||||||    
T  53770470 cacttaacagaattatttaacggcagagact--agagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacct 53770378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 19050382 - 19050299
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaat 104  Q
    |||||||||||||||||||||||||||||||  |||  ||||||||||||   |||| || ||||  ||| |||||||||||||||    
T  19050382 acatcatcacttaatagaattatttaacgtcggaga--ctaaagtgataacggaagtgcagagtccgagacttctttgtatttaat 19050299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 39869064 - 39868965
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||| | ||||||||||||||| |||  ||||||||||||   |||| || ||||||  | || ||||||||||||| ||||||||| ||    
T  39869064 acatcatcacttaacataattatttaacgtcagaga--ctaaagtgataacggaagtgcagagtcga--acttgtttgtatttaattatgagtcagggac 39868969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 48740006 - 48740093
Alignment:
Q  26 cacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcagg 115  Q
    ||||||| |||||||||||||||||  ||||  |||||||||| | |||| || ||| |  || |||||||||||||||| |||||||||    
T  48740006 cacttaacagaattatttaacgtcagggact--aaagtgataacagaagtgcagagttggggacttctttgtatttaattatgagtcagg 48740093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 9341004 - 9341103
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||||||| || |||||||||| |||  |||||||||||| | |||| || ||||  ||| || |||||||||||| |||||||||| ||    
T  9341004 acatcatcacttaatagatttttttaacgtcagaga--ctaaagtgataacagaagtgcaaagtcagagacttatttgtatttaatcctgagtcagggac 9341101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 9339790 - 9339691
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||| ||| || ||||||||||  ||||  ||||||||||   |||| || |||||  ||||| |||||||||||| |||||||||| ||    
T  9339790 acatcatcacttaacagatttttttaacgtcagggact--aaagtgataacggaagtgcagagtcggggatttatttgtatttaatcctgagtcagggac 9339693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 5782551 - 5782465
Alignment:
Q  26 cacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcag 114  Q
    ||||||||| ||||||||||||||| |||  ||||||||||||   |||| |||| ||  ||| |||||||||||||||  ||||||||    
T  5782551 cacttaataaaattatttaacgtcagaga--ctaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcag 5782465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 7945569 - 7945641
Alignment:
Q  57 ctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaacctttatgacag 129  Q
    ||||||||||||   |||| |||||||  ||| || |||||||||||| ||||||||||||||| | ||||||    
T  7945569 ctaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaacctatgtgacag 7945641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 17466807 - 17466900
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcag 114  Q
    |||||||||||||| ||||||||||||||||  |||  ||||||||||||   |||| || ||||  ||| ||||||||||||||| |||||||||    
T  17466807 acatcatcacttaacagaattatttaacgtcttaga--ctaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctgagtcag 17466900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 15441986 - 15442058
Alignment:
Q  57 ctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaacctttatgacag 129  Q
    ||||||||||||||||||| || | || | || | ||||||||||||| |||||||||||| |||| ||||||    
T  15441986 ctaaagtgataataaaagtgcacattcaaggactactttgtatttaatcctgagtcaggaatctttgtgacag 15442058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 33161909 - 33161828
Alignment:
Q  21 atcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaat 104  Q
    |||||||||||| | |||||||||||||||| ||  ||||||||||||   ||||||||||||  ||| ||||||| |||||||    
T  33161909 atcatcacttaacaaaattatttaacgtcaagga--ctaaagtgataacggaagtacatagtctgagacttctttgcatttaat 33161828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 5965421 - 5965528
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    ||||||| |||||| | ||| ||||||||||| |||||  ||||||||||   |||| || |||| |||| ||||||||||||||| |||||||||| ||    
T  5965421 acatcattacttaacataatcatttaacgtcagagact--aaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagggac 5965518  T
Q  119 ctttatgaca 128  Q
     ||| |||||    
T  5965519 atttgtgaca 5965528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 41121214 - 41121145
Alignment:
Q  60 aagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaacctttatgacag 129  Q
    ||||||||||| |||| |||||||  ||| |||||||||||||||  |||||||| |||||||| |||||    
T  41121214 aagtgataatagaagtgcatagtcagagacttctttgtatttaatcatgagtcagtaacctttaagacag 41121145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 28619133 - 28619032
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcaggaac 118  Q
    |||||||||||||| | |||||||||||| |  |||||  ||||||||||  ||||| || |||| | ||||||||||||||||||  || |||||| ||    
T  28619133 acatcatcacttaacaaaattatttaacggccgagact--aaagtgataacgaaagtgcagagtcaatgatttctttgtatttaatcatgggtcagggac 28619036  T
Q  119 cttt 122  Q
    ||||    
T  28619035 cttt 28619032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 5738002 - 5738094
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtca 113  Q
    |||||||||||||| |||||||||||||| ||||||  || |||||||||   ||||||| |||| |  | |||||||||||||||  |||||||    
T  5738002 acatcatcacttaacagaattatttaacgccaaaga--ctgaagtgataacggaagtacagagtcaataacttctttgtatttaatcttgagtca 5738094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 28619541 - 28619618
Alignment:
Q  36 aattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcagg 115  Q
    |||||||||| |||| |||||  |||||||||||| |||| || |||| | ||  |||||||||||||| ||||||||||    
T  28619541 aattatttaatgtcagagact--aaagtgataatagaagtgcagagtcaatgacctctttgtatttaatcctgagtcagg 28619618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 16611865 - 16611779
Alignment:
Q  26 cacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcag 114  Q
    ||||||| ||||||||||||||||| |||  ||||||||||||   |||| |||| ||  ||  ||||||||||||||| |||||||||    
T  16611865 cacttaacagaattatttaacgtcagaga--ctaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcag 16611779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 9537166 - 9537074
Alignment:
Q  19 acatcatcacttaatagaattatttaacgtcaaagactctaaagtgataataaaagtacatagtcgaagatttctttgtatttaattctgagtcag 114  Q
    |||||||||||||  | |||||||||||||||  ||||  |||||||||||  |||| || |||| | || |||||||||||||||||| ||||||    
T  9537166 acatcatcacttaccataattatttaacgtcagtgact--aaagtgataatggaagtgcacagtc-atgacttctttgtatttaattctaagtcag 9537074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 23508027 - 23507948
Alignment:
Q  86 agatttctttgtatttaattctgagtcaggaacctttatgacagtgaaatgtaagatcagagattaacgtgactatttgct 166  Q
    |||||| |||||||||||| |||| |||||||||| | |||||| ||  ||| ||| |||||| ||| |||||||||||||    
T  23508027 agatttgtttgtatttaatcctgaatcaggaacctatgtgacagggaggtgt-agagcagagactaaagtgactatttgct 23507948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University