View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8690_6 (Length: 301)
Name: NF8690_6
Description: NF8690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8690_6 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 286
Target Start/End: Complemental strand, 31342828 - 31342560
Alignment:
| Q |
14 |
gagatgaaaatgaaatgagtgaagccatgcagtgtagtgtagagtgatgttggactttggtagcgtaaggtcaccgcagtatttgactgtttgtttattt |
113 |
Q |
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| T |
31342828 |
gagatgaaaatgaaatgagtgaagccatgcagtgtagtgtagagtgatgttggactttggtagcgtaaggtcaccgcagtatttgactgttt----attt |
31342733 |
T |
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| Q |
114 |
agtgtgaaaatgacctcctcttctttccccttttttcttcccttgtgtattgaccaaaatagcccctaacgttgggttgggaccaaccgtccaacctttt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
31342732 |
agtgtgaaaatgacctcctcttctttccccttttttcttgccttgtgtattgaccaaaatagcccctaatgttgggttgggaccaaccgtccaacctttt |
31342633 |
T |
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| Q |
214 |
ttattctgggtttattttataataatgctagatatgtataacttaatgctgtcttttcacatctactcagttt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
31342632 |
ttattctgggtttattttataataatgctagatatgtataactaaatgctgtcttttcacatctactcagttt |
31342560 |
T |
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