View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8691_low_3 (Length: 479)
Name: NF8691_low_3
Description: NF8691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8691_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 443; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 10 - 465
Target Start/End: Original strand, 33876549 - 33877006
Alignment:
| Q |
10 |
gcagagaggtggttccgtcgtgttgcccaaattaaggatatttctgagctcagtcagattccagatgaagattttccttcaataatgcctatgcgtaaag |
109 |
Q |
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| T |
33876549 |
gcagagaggtggttccgtcgtgttgcccaaattaaggatatttctgagctcagtcagattccagatgaagattttccttcaataatgcctatgcgtaaag |
33876648 |
T |
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| Q |
110 |
gggtgaacagattcgttgtgagcaagcggaaaacaccactggaaaggagattgacatctcagcagtaccgaagaaatcttccagttgtgagctcagatcc |
209 |
Q |
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| T |
33876649 |
gggtgaacagattcgttgtgagcaagcggaaaacaccactggaaaggagattgacatctcagcagtaccgaagaaatcttccagctgtgagctcagatcc |
33876748 |
T |
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| Q |
210 |
tgttaagagagaaaatgaaggtagctgaagagtatttgtaggcgatgttaaaattttaccatcaattatacaaaaggaaaacgaagatgtggaaaacatg |
309 |
Q |
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| T |
33876749 |
tgttaagagagaaaatgaaggtagctgaagagtatttgtaggcgatgttaaaattttaccatcaattatacaaaaggaaaacgaagatgtggaaaacatg |
33876848 |
T |
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| Q |
310 |
a--attaaaacattttgttgtgacatctgtaagagaattttgacatcaataatttatctatctctgttgaggctcctttgatttatttcatattggagat |
407 |
Q |
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| T |
33876849 |
aatattaaaacattttgttgtgacatctgtaagagaattttgacatcaataatttatctatctctgttgaggctcctttgatttatttcatattggagat |
33876948 |
T |
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| Q |
408 |
ggggacgagcttgtcatatttcataaataagtgaagtgatgcattaaaaccaatattt |
465 |
Q |
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| T |
33876949 |
ggggacgagcttgtcatatttcataaataagtgaagtgatgcattaaaaccaatattt |
33877006 |
T |
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