View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8692_high_1 (Length: 266)
Name: NF8692_high_1
Description: NF8692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8692_high_1 |
 |  |
|
| [»] scaffold0041 (2 HSPs) |
 |  |  |
|
| [»] scaffold0311 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 5890795 - 5890620
Alignment:
| Q |
9 |
agtgagatgaatataaattgatatatgtatacttttctgatcagaaatgaaatttatcaaagaagacaacagatctcatgtcatgatgaattgtggaaaa |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5890795 |
agtgacatgaatataaattgatatatgtatacttttctgatcataaatgaaatttatcaaagaagacaacagatctcatgtaatgatgaattgtggaaaa |
5890696 |
T |
 |
| Q |
109 |
agggtgctttgtgaatgaaggtatttggctgaaattcatgatggagacgatgcttcattgtgacgatgtattatca |
184 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5890695 |
aaggtgctttgtgaatgaaggtatttggctgaaattcatgatggagacgatgcttcattgtgacgatgtattatca |
5890620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 32536708 - 32536770
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
32536708 |
ggtgccatttaatttaggaaatgagagttctttcccaccatgggaaagttgatcatgtccatt |
32536770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 41859308 - 41859365
Alignment:
| Q |
183 |
caggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
41859308 |
caggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcat |
41859365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 5034896 - 5034960
Alignment:
| Q |
183 |
caggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||| |||||| |
|
|
| T |
5034896 |
caggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccatt |
5034960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 34992313 - 34992250
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
34992313 |
aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccatt |
34992250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 37639718 - 37639773
Alignment:
| Q |
192 |
tttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||| ||||||||||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
37639718 |
tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatattcatt |
37639773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 5035324 - 5035262
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | | ||| |||||||||||||| |||||| |
|
|
| T |
5035324 |
ggtgccatttaatttgggaaaggagagttcttttccaccataggaaagttgatcatgtccatt |
5035262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 44098470 - 44098435
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
44098470 |
aggtgccatttaatttgggaaaggagagttctttcc |
44098435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 34992015 - 34992077
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||| ||||||| ||| | | ||||| |||||||||||| |||||| |
|
|
| T |
34992015 |
ggtgccatttaatttgggaaacgagagttattttccaccatggaaaagttgatcatgtccatt |
34992077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 41859880 - 41859914
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41859880 |
ggtgccatttaatttagaaaaggagagttctttcc |
41859914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 61453 - 61502
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
||||| |||||||||| |||||||||| |||||||| | ||||||||||| |
|
|
| T |
61453 |
aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt |
61502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 1365829 - 1365877
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||| | ||||||||||| |
|
|
| T |
1365829 |
ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt |
1365877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 10425108 - 10425045
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10425108 |
aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatatccatt |
10425045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 11417686 - 11417749
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
11417686 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
11417749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 29651381 - 29651322
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatc |
243 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
29651381 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatc |
29651322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 36865765 - 36865703
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
36865765 |
ggtgacatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccatt |
36865703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 21166424 - 21166361
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
21166424 |
aggtgccatttaatttgagaaaggagagttctttcccatcatgggaaagttgatcatgtccatt |
21166361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 31836509 - 31836446
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
31836509 |
aggtgccatttaatttgagaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
31836446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 10424123 - 10424185
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||| |||||| |
|
|
| T |
10424123 |
ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccatt |
10424185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 11417985 - 11417923
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
11417985 |
ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
11417923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 39523319 - 39523257
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | | |||||||||||||||||| |||||| |
|
|
| T |
39523319 |
ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccatt |
39523257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 26611333 - 26611269
Alignment:
| Q |
183 |
caggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||| |||||||||| ||||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
26611333 |
caggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccatt |
26611269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 38695002 - 38694947
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
38695002 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcat |
38694947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 21165447 - 21165513
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatttgat |
251 |
Q |
| |
|
||||||||||||||| |||||| | |||||||||| | |||| ||||||||||||| |||||||||| |
|
|
| T |
21165447 |
ggtgccatttaatttgggaaagaatagttctttcccaccatgagaaagttgatcatgtccatttgat |
21165513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 38694702 - 38694764
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||| | ||||| |||||||||||||| |||| |
|
|
| T |
38694702 |
ggtgccatttaatttggaaaaggagagttctttcccagcatggaaaagttgatcatattcatt |
38694764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 45230365 - 45230427
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
45230365 |
ggtgccatttaattcgggaaaagagagttctttcccaccatgggaaagttgatcatattcatt |
45230427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 45236008 - 45235946
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||| | |||||||||||| ||||| |||||| |
|
|
| T |
45236008 |
ggtgccatttaatttggaaaaggagagttctttcccaccatgggaaagttaatcatgtccatt |
45235946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 9939422 - 9939357
Alignment:
| Q |
182 |
tcaggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||| | ||||| |||||||||||| |||||| |
|
|
| T |
9939422 |
tcaggtgccatttaatttgagaaaggggagttctttcccaccatggaaaagttgatcatgtccatt |
9939357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 39522374 - 39522437
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||| |||||||||| |||||||| |||||||| | ||||||||||||||||||||||||| |
|
|
| T |
39522374 |
aggtgtcatttaatttgggaaaggatagttctttttcaccatgggaaagttgatcatatccatt |
39522437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 38143781 - 38143723
Alignment:
| Q |
189 |
ccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| | ||||||||||||| |||| |||||| |
|
|
| T |
38143781 |
ccatttaatttgggaaatgagagttctttcccaccatgggaaagttggtcatgtccatt |
38143723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 26610350 - 26610407
Alignment:
| Q |
190 |
catttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| | ||||||||| |||||||| |||||| |
|
|
| T |
26610350 |
catttaatttgggaaatgagagttctttcccaccatgggaaaattgatcatgtccatt |
26610407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 29650416 - 29650477
Alignment:
| Q |
186 |
gtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | | | |||||||||||||||| |||||| |
|
|
| T |
29650416 |
gtgccatttaatttgggaaatgagagttcttttccatcttgggaaagttgatcatgtccatt |
29650477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 36864818 - 36864879
Alignment:
| Q |
186 |
gtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||| | |||| ||||||||||||| |||||| |
|
|
| T |
36864818 |
gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagttgatcatgtccatt |
36864879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 10424419 - 10424385
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10424419 |
ggtgccatttaatttgggaaaggagagttctttcc |
10424385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 21166137 - 21166171
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21166137 |
ggtgccatttaatttgggaaaggagagttctttcc |
21166171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 29650689 - 29650655
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29650689 |
ggtgccatttaatttgggaaaggagagttctttcc |
29650655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 31836221 - 31836255
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
31836221 |
ggtgccatttaatttgggaaaggagagttctttcc |
31836255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 45235733 - 45235767
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
45235733 |
ggtgccatttaatttgggaaaggagagttctttcc |
45235767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 47377647 - 47377597
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagtt |
234 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| ||||| | |||||||||||| |
|
|
| T |
47377647 |
aggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaagtt |
47377597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 55159186 - 55159228
Alignment:
| Q |
191 |
atttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
||||||||| |||||||||| |||||||||| ||||||||||| |
|
|
| T |
55159186 |
atttaatttgggaaaggagacttctttcctaccatgggaaagt |
55159228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 9939124 - 9939184
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||| |||||||||| |||||| |||||||||| ||| |||||||||||||||| |||||| |
|
|
| T |
9939124 |
aggtgtcatttaatttgggaaagtagagttcttttcta---tgggaaagttgatcatgtccatt |
9939184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 47198604 - 47198653
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
||||| |||||||||| |||||||||| |||||||| | ||||||||||| |
|
|
| T |
47198604 |
aggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagt |
47198653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 47376852 - 47376905
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatc |
238 |
Q |
| |
|
|||| |||||||||| ||||||| ||||| ||||| | |||||||||||||||| |
|
|
| T |
47376852 |
ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc |
47376905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 4261645 - 4261582
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
4261645 |
aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatctccatt |
4261582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 38071897 - 38071960
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
38071897 |
aggtgccatttaatttaggaaaggagagttctttcccatcatgggaaagttgatcatgtccatt |
38071960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 38778853 - 38778916
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
38778853 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccatt |
38778916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 37468906 - 37468965
Alignment:
| Q |
181 |
atcaggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
37468906 |
atcaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcat |
37468965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 668179 - 668241
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
668179 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
668241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 4261209 - 4261267
Alignment:
| Q |
189 |
ccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |
|
|
| T |
4261209 |
ccatttaatttaggaaaggagagttcttttctaccatgggaaagttgatcatgtccatt |
4261267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 17145622 - 17145684
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
17145622 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
17145684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 37469053 - 37468991
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
37469053 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
37468991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 38779611 - 38779549
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
38779611 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
38779549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 41194512 - 41194575
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||| |||||| |
|
|
| T |
41194512 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttaatcatgtccatt |
41194575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 7677855 - 7677802
Alignment:
| Q |
187 |
tgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
7677855 |
tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcat |
7677802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 37864356 - 37864293
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
37864356 |
aggtgccatttaatttgggaaataagagttctttcccaccatgggaaagttgatcatgtccatt |
37864293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 669151 - 669089
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||| ||||||| ||||| | ||| ||||||||||||||||||||| |
|
|
| T |
669151 |
ggtgccatttaatttgggaaatgagagttttttcccaccataggaaagttgatcatatccatt |
669089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 17145920 - 17145858
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
17145920 |
ggtgccatttaatttgggaaaggagagttcttttttactatgggaaagttgatcatgtccatt |
17145858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 38072339 - 38072277
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||| | | |||||||||||||||||| |||||| |
|
|
| T |
38072339 |
ggtgccatttaatttgggaaatgagagttcttttccaccatgggaaagttgatcatgtccatt |
38072277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 7677421 - 7677479
Alignment:
| Q |
189 |
ccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||| |||||||||| |||||||| | |||| |||||||||||| |||||| |
|
|
| T |
7677421 |
ccatttaatttgggaaaggagaattctttcccaccatgaaaaagttgatcatgtccatt |
7677479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 668453 - 668420
Alignment:
| Q |
186 |
gtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |
|
|
| T |
668453 |
gtgccatttaatttgggaaaggagagttctttcc |
668420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 21472002 - 21471940
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
21472002 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccatt |
21471940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 21471016 - 21471079
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
21471016 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
21471079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 37547997 - 37548060
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
37547997 |
aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccatt |
37548060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 14574048 - 14573985
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||| |
|
|
| T |
14574048 |
aggtgccatttaatttgggaaaggagagttctttcccaccataagaaagttgatcatatccatt |
14573985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 38834685 - 38834622
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||| |||||| |
|
|
| T |
38834685 |
aggtgccatttaatttgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccatt |
38834622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 13134318 - 13134380
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||| |||||| |
|
|
| T |
13134318 |
ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccatt |
13134380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 14573261 - 14573323
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
14573261 |
ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccatt |
14573323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 4479750 - 4479688
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| | |||||||||||| ||||| |||||| |
|
|
| T |
4479750 |
ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagttaatcatgtccatt |
4479688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 38834386 - 38834449
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||| | || ||||||||||||||| |||||| |
|
|
| T |
38834386 |
aggtgccatttaatttgggaaaggagggtactttcccaccacgggaaagttgatcatgtccatt |
38834449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 1164825 - 1164790
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1164825 |
aggtgccatttaatttgggaaaggagagttctttcc |
1164790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 33433208 - 33433160
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||| | ||||||||||| |
|
|
| T |
33433208 |
ggtgccgtttaatttgagaaaggagagttctttcccaccatgggaaagt |
33433160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 9948935 - 9948873
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
9948935 |
ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
9948873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 43738029 - 43737964
Alignment:
| Q |
182 |
tcaggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
43738029 |
tcaggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccatt |
43737964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 16270207 - 16270269
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
16270207 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
16270269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 16271196 - 16271134
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
16271196 |
ggtgccatttaatttaggaaaggagagttctttctcatcatgggaaagttgatcatgtccatt |
16271134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 23440913 - 23440851
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
23440913 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
23440851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 38931293 - 38931233
Alignment:
| Q |
187 |
tgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
38931293 |
tgccatttaatttgggaaagaagagttcttttctaccatgggaaagttgatcatatccatt |
38931233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 51974436 - 51974492
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
51974436 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcat |
51974492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 48972494 - 48972431
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||| |||||| |
|
|
| T |
48972494 |
aggtgccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccatt |
48972431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 193850 - 193912
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||| ||||||| ||||| |||||| |
|
|
| T |
193850 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttaatcatgtccatt |
193912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 43737729 - 43737791
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| |||||| |||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
43737729 |
ggtgccatttaatttgggaaagtagagttatttcccaccatgggaaagttgatcatgtccatt |
43737791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 9947995 - 9948057
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| |||||| | |||||||||| | ||||| |||||||||||||| |||| |
|
|
| T |
9947995 |
ggtgccatttaatttgggaaagaaaagttctttcccaccatggaaaagttgatcatattcatt |
9948057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 23440617 - 23440679
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||| ||||||||| || |||||| |
|
|
| T |
23440617 |
ggtgccatttaatttgggaaaggagagttctttccaactatggaaaagttgattatgtccatt |
23440679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 38930312 - 38930374
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||| | ||||||||||||||||||||||||| |
|
|
| T |
38930312 |
ggtgtcatttaatttgggaaaggaaagttctttttcaccatgggaaagttgatcatatccatt |
38930374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 50827138 - 50827077
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
50827138 |
ggtgccatttaatttgagaaaggagagtt-tttcccaccatgggaaagttgatcatgtccatt |
50827077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 48971705 - 48971762
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatat |
242 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
48971705 |
ggtgtcatttaatttgggaaaggagagttctttcccacaatgagaaagttgatcatat |
48971762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 51975275 - 51975220
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
51975275 |
ggtgccatttaatttgggaaaggagagttctttttcactatgggaaagttgatcat |
51975220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 6075990 - 6076036
Alignment:
| Q |
201 |
ggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||||||| |||||| |
|
|
| T |
6075990 |
ggaaaggagagttcttttctaccatgagaaagttgatcatgtccatt |
6076036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 16270901 - 16270935
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16270901 |
ggtgccatttaatttgggaaaggagagttctttcc |
16270935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 38930608 - 38930574
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
38930608 |
ggtgccatttaatttgggaaaggagagttctttcc |
38930574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 51987825 - 51987875
Alignment:
| Q |
183 |
caggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
|||||| |||||||||| |||||||||| |||||||| | ||||||||||| |
|
|
| T |
51987825 |
caggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt |
51987875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 8560839 - 8560887
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||| | ||||||||||| |
|
|
| T |
8560839 |
ggtgacatttaatttgggaaaggagacttctttcccatcatgggaaagt |
8560887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 7193335 - 7193400
Alignment:
| Q |
182 |
tcaggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
7193335 |
tcaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatctccatt |
7193400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 22579935 - 22579997
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | | ||||||||||||||||||||||||| |
|
|
| T |
22579935 |
ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatatccatt |
22579997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 33480676 - 33480614
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
33480676 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
33480614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 3543111 - 3543049
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
3543111 |
ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccatt |
3543049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 15083366 - 15083308
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatc |
243 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||| |
|
|
| T |
15083366 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatatc |
15083308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 22582523 - 22582465
Alignment:
| Q |
189 |
ccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
22582523 |
ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
22582465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 22587354 - 22587296
Alignment:
| Q |
189 |
ccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
22587354 |
ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
22587296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 33018167 - 33018229
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||| |||||| |
|
|
| T |
33018167 |
ggtgccatttaatttgggaaaggagagttctttcccatcattggaaagttgatcatgtccatt |
33018229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 33479698 - 33479758
Alignment:
| Q |
187 |
tgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
33479698 |
tgccatttaatttgggaaaggagagttatttcccaccatgggaaagttgatcatgtccatt |
33479758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 7193627 - 7193564
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| | | ||||||||||||||||||||||||| |
|
|
| T |
7193627 |
aggtgccatttaatttgagaaagtagagttcttttccatcatgggaaagttgatcatatccatt |
7193564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 33018457 - 33018402
Alignment:
| Q |
192 |
tttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
33018457 |
tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
33018402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 3542816 - 3542869
Alignment:
| Q |
187 |
tgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
3542816 |
tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcat |
3542869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 15082402 - 15082459
Alignment:
| Q |
190 |
catttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||| ||||| ||||||||||| | | |||||||||||||||||| |||||| |
|
|
| T |
15082402 |
catttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccatt |
15082459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 7531829 - 7531877
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagt |
233 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||| ||||||||||| |
|
|
| T |
7531829 |
ggtggcatttaatttgggaaaggagacttctttcctaccatgggaaagt |
7531877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 15082672 - 15082638
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15082672 |
ggtgccatttaatttgggaaaggagagttctttcc |
15082638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 22580597 - 22580631
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22580597 |
ggtgccatttaatttgggaaaggagagttctttcc |
22580631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 22587083 - 22587117
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22587083 |
ggtgccatttaatttgggaaaggagagttctttcc |
22587117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 33479972 - 33479938
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33479972 |
ggtgccatttaatttgggaaaggagagttctttcc |
33479938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 24126766 - 24126713
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatc |
238 |
Q |
| |
|
|||| |||||||||| ||||||| ||||| ||||| | |||||||||||||||| |
|
|
| T |
24126766 |
ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc |
24126713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 38922744 - 38922805
Alignment:
| Q |
186 |
gtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
38922744 |
gtgccatttaatttgggaaaggagagttatttcctaccatgggaaagttgatcatatccatt |
38922805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 19132563 - 19132625
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
19132563 |
ggtgccatttaatttgggaaaggagagttctttcctactatgggaaagttgatcatgtccatt |
19132625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 36750486 - 36750430
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
36750486 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcat |
36750430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 3971951 - 3971888
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||||| |
|
|
| T |
3971951 |
aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccatt |
3971888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 3997927 - 3997990
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||||| |
|
|
| T |
3997927 |
aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccatt |
3997990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 19132860 - 19132798
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
19132860 |
ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccatt |
19132798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 41756481 - 41756425
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
41756481 |
aggtgtcatttaagttaggaaaggagagttctttcccatcatgggaaagttgatcat |
41756425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 32490244 - 32490181
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||| |||||| |
|
|
| T |
32490244 |
aggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccatt |
32490181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 32489946 - 32490008
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| |||||||||| |||||| | | |||||||||||||||||| |||||| |
|
|
| T |
32489946 |
ggtgccatttaatttgggaaaggagaattcttttccaccatgggaaagttgatcatgtccatt |
32490008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 45243035 - 45242977
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatc |
243 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| | | ||||||||||||||||||||| |
|
|
| T |
45243035 |
ggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagttgatcatatc |
45242977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 45242067 - 45242128
Alignment:
| Q |
186 |
gtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | | |||||||||||||||||| |||||| |
|
|
| T |
45242067 |
gtgccatttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccatt |
45242128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 31556264 - 31556217
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaag |
232 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
31556264 |
ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaag |
31556217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 44687212 - 44687149
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||| | | ||||| |||||||||||||| |||| |
|
|
| T |
44687212 |
aggtgccatttaatttgggaaaggagaattcttttccaccatggaaaagttgatcatattcatt |
44687149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 38923713 - 38923661
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgat |
237 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| | ||||| ||||||||| |
|
|
| T |
38923713 |
ggtgccatttaatttgggaaatgagagttctttcccaccatggaaaagttgat |
38923661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 52491891 - 52491926
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcct |
220 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |
|
|
| T |
52491891 |
ggtgccatttaatttgggaaaggagagttctttcct |
52491926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 36750050 - 36750100
Alignment:
| Q |
190 |
catttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
|||||||||| ||||||||||||||||| | | ||||| |||||||||||| |
|
|
| T |
36750050 |
catttaatttgggaaaggagagttcttttccaccatggaaaagttgatcat |
36750100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 38923438 - 38923472
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
38923438 |
ggtgccatttaatttgggaaaggagagttctttcc |
38923472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 45242341 - 45242307
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
45242341 |
ggtgccatttaatttgggaaaggagagttctttcc |
45242307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 49757230 - 49757181
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagtt |
234 |
Q |
| |
|
|||||| |||||||| |||||||||| || ||||||| |||||||||||| |
|
|
| T |
49757230 |
ggtgccgtttaatttgggaaaggagacttttttcctaccatgggaaagtt |
49757181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 41755498 - 41755554
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
||||| |||||||||| ||||||||||||| ||||| | |||| |||| |||||||| |
|
|
| T |
41755498 |
aggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaaattgatcat |
41755554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 8204119 - 8204182
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
8204119 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
8204182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 15184065 - 15184003
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
15184065 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
15184003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 33002865 - 33002802
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
33002865 |
aggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccatt |
33002802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 12190209 - 12190144
Alignment:
| Q |
182 |
tcaggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
12190209 |
tcaggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagttgatcatgtccatt |
12190144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 33001929 - 33001994
Alignment:
| Q |
182 |
tcaggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||| |||||| |
|
|
| T |
33001929 |
tcaggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccatt |
33001994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 36626679 - 36626623
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcat |
240 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||| |
|
|
| T |
36626679 |
aggtgccatttaatttgggaaatgagagttctttcccaccatgggaaagttgatcat |
36626623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 8040194 - 8040257
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||| | | |||||||||||||||| |||||| |
|
|
| T |
8040194 |
aggtgccatttaatttgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccatt |
8040257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 686417 - 686478
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| |||||| |
|
|
| T |
686417 |
ggtgccatttaatttgggaaaggagagtt-tttcccaccatgggaaagttgatcatgtccatt |
686478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 39950404 - 39950451
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaag |
232 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
39950404 |
ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag |
39950451 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 15183079 - 15183151
Alignment:
| Q |
176 |
gtattatcaggtgccatttaatttaggaaaggagag-ttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||| ||| ||||||||||||||| ||||||||||| || ||||| | |||| ||||||||||||| |||||| |
|
|
| T |
15183079 |
gtataatcgggtgccatttaatttgggaaaggagagtttatttcccatcatgagaaagttgatcatgtccatt |
15183151 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 8040493 - 8040430
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||||| |||||||| | |||||||| | | |||||||||| ||||| |||||| |
|
|
| T |
8040493 |
aggtgccatttaatttgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccatt |
8040430 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 686701 - 686667
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
686701 |
ggtgccatttaatttgggaaaggagagttctttcc |
686667 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 39950480 - 39950446
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
39950480 |
ggtgccatttaatttgggaaaggagagttctttcc |
39950446 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 687395 - 687334
Alignment:
| Q |
186 |
gtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | | |||| ||||||||| || |||||| |
|
|
| T |
687395 |
gtgccatttaatttgggaaaggagagttcttttccactatggaaaagttgattatgtccatt |
687334 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 27221 - 27283
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
27221 |
ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccatt |
27283 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 27623 - 27561
Alignment:
| Q |
185 |
ggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgatcatatccatt |
247 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||| | ||||||||||||||||||||||||| |
|
|
| T |
27623 |
ggtgccatttaatttggaaaaggagagttttttcccaccatgggaaagttgatcatatccatt |
27561 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0311 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0311
Description:
Target: scaffold0311; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 209 - 156
Alignment:
| Q |
184 |
aggtgccatttaatttaggaaaggagagttctttcctaacatgggaaagttgat |
237 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
209 |
aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgat |
156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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