View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8695_high_1 (Length: 298)
Name: NF8695_high_1
Description: NF8695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8695_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 17997212 - 17997486
Alignment:
| Q |
11 |
gacatcataatacaaaataaaaactcacattagatgtcagtgtaaaactaatgtactatcattatatgtctattaagctctaagaaagaactgtgcatgt |
110 |
Q |
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| T |
17997212 |
gacataataatacaaaataaaaactcacattagatgtcagtgtaaaactaatgtactatcattatatgtctattaagctctaagaaagaactgtgcatgt |
17997311 |
T |
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| Q |
111 |
acacattttttcaagtttattcaaaaaggtataacaacaaaagaaaaccatcatttcctatcacaagcggttagcagttggttcgtaccccacaagagca |
210 |
Q |
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| T |
17997312 |
acacattttttcaagtttattcaaaaaggtataacaacaaaagaaaaccatcatttcctatcacaagcggttagcagttggttcgtaccacacaagagca |
17997411 |
T |
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| Q |
211 |
taagttcaactccctctgccaacattaagactttgttagtgggtaatttgtaagtaagtacccctgtctgtgctc |
285 |
Q |
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| T |
17997412 |
taagttcaactccctctgccaacattaagactttgttagtgggtaatttgtaagtaagtacccctgtctgtgctc |
17997486 |
T |
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