View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8697_low_11 (Length: 250)
Name: NF8697_low_11
Description: NF8697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8697_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17755330 - 17755109
Alignment:
| Q |
1 |
caaaatttcaacagaggatttatatattgttgataacaagaaattttactcgttatatttttaaaggtcatgaatcaaaattctagttggagtagtgttg |
100 |
Q |
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| T |
17755330 |
caaaatttcaacagaggatttacatattgttgataacgagaaattttactcgttatatttttaaaggtcatgaatcaaaattctagtcagagtagtgtta |
17755231 |
T |
|
| Q |
101 |
cataaaagttagattaaagcaaagcaccgttagcgacacataattatatagtttgttaatttttatcattttgatattatttaatactatatatacagta |
200 |
Q |
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||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||| |
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| T |
17755230 |
cataaaagttagatt-----agagcactgttagcgacacataattatatagtttgttaagttttattattttgatattatataatactatatatagagta |
17755136 |
T |
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| Q |
201 |
cattaccattactcattttttcacaaa |
227 |
Q |
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|||||||||| |||||||||||||||| |
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| T |
17755135 |
cattaccattgctcattttttcacaaa |
17755109 |
T |
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