View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8697_low_13 (Length: 245)
Name: NF8697_low_13
Description: NF8697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8697_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 46681841 - 46682056
Alignment:
| Q |
19 |
tcaacattgtcttcggagactgccacgtgtaacgccgtggttccaacattgttatttggaagcgtgatgtctcctccgtaacgcataatgtcttgcaata |
118 |
Q |
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| T |
46681841 |
tcaacattgtcttcggagactgccacgtgtaacgccgtggttccaacattgttatttggaagcgtgatgtctcctccgtaacgcataatgtcttgcaata |
46681940 |
T |
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| Q |
119 |
aattgaaattgttttgttcaactgcagtgcatgcatattgaccaacatcaccaatttgcaaggttgcaccattttctgccaaaagttttgttactgattc |
218 |
Q |
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| T |
46681941 |
aattgaaattgttttgttcaactgcagtgcatgcatattgaccaacatccccaatttgcaaggttgcaccattttctgctaaaagttttgttactgattc |
46682040 |
T |
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| Q |
219 |
atgtcctccaagtata |
234 |
Q |
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| T |
46682041 |
atgtcctccaagtata |
46682056 |
T |
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