View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8701_low_13 (Length: 327)
Name: NF8701_low_13
Description: NF8701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8701_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 40371285 - 40370985
Alignment:
| Q |
17 |
gttgaataatcaaaaacaaataacaagaaaacattgctgagatatatgaatgaaatgaggtgtttgttaaggacctggaaaataggtgaagaagaatatg |
116 |
Q |
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| T |
40371285 |
gttgaataatcaatatcaaattacatgaaaactttgctgagatatatgaatgaaatgaggtgtttgttaaggacctggaaaataggtgaagaagaatatg |
40371186 |
T |
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| Q |
117 |
aaggagaataagaagaggcgagaaaccctagaattttgcagatgttgaacggacatggcaaggaaatttgggtgatcgattaagaattaacatacaaaat |
216 |
Q |
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| T |
40371185 |
aaggagaataagaagaggcgagaaaccctagaattttgcagatgttgaacggacattgcaaggaaatttgggtgatcgattaagaattaacatacaaaat |
40371086 |
T |
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| Q |
217 |
tgaaatttagaggaattggatttggtgaataatggatcggattcgaaggtctttgaatgttaaacgacgacgtttgaaggtgatcgccaaggaagaataa |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40371085 |
tgaaatttagaggaattggatttggtgaataatggatcggattcgaaggtctttgaatgttaaacgacgacgtttgaaggtgatcgccaaggaagaataa |
40370986 |
T |
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| Q |
317 |
t |
317 |
Q |
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| T |
40370985 |
t |
40370985 |
T |
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