View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8701_low_8 (Length: 389)

Name: NF8701_low_8
Description: NF8701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8701_low_8
NF8701_low_8
[»] chr4 (13 HSPs)
chr4 (230-377)||(55452357-55452504)
chr4 (90-136)||(18513177-18513223)
chr4 (127-210)||(35157980-35158063)
chr4 (90-143)||(20633535-20633588)
chr4 (90-167)||(22440559-22440635)
chr4 (90-167)||(10499229-10499305)
chr4 (201-229)||(753014-753042)
chr4 (90-122)||(11596299-11596331)
chr4 (90-122)||(12895216-12895248)
chr4 (90-122)||(29205553-29205585)
chr4 (175-227)||(30298910-30298962)
chr4 (175-227)||(30327778-30327830)
chr4 (90-122)||(34306746-34306778)
[»] chr3 (8 HSPs)
chr3 (15-136)||(8101819-8101940)
chr3 (90-136)||(25775578-25775624)
chr3 (189-228)||(1852600-1852639)
chr3 (90-136)||(40052383-40052429)
chr3 (90-131)||(25211606-25211647)
chr3 (201-229)||(3164112-3164140)
chr3 (90-122)||(11610594-11610626)
chr3 (193-229)||(37077320-37077356)
[»] chr8 (4 HSPs)
chr8 (175-232)||(36450797-36450854)
chr8 (127-226)||(13844591-13844689)
chr8 (127-167)||(34897109-34897149)
chr8 (201-229)||(43737900-43737928)
[»] scaffold0020 (1 HSPs)
scaffold0020 (90-167)||(135265-135347)
[»] chr5 (8 HSPs)
chr5 (175-229)||(14674231-14674285)
chr5 (90-205)||(2436908-2437028)
chr5 (201-240)||(39205837-39205876)
chr5 (195-229)||(7175082-7175116)
chr5 (90-136)||(27932306-27932352)
chr5 (175-229)||(43001762-43001816)
chr5 (201-229)||(6401442-6401470)
chr5 (194-230)||(16941987-16942023)
[»] chr6 (10 HSPs)
chr6 (127-232)||(17841584-17841689)
chr6 (104-153)||(21924907-21924956)
chr6 (90-211)||(7938096-7938217)
chr6 (175-229)||(17302518-17302572)
chr6 (90-131)||(5569825-5569866)
chr6 (90-211)||(9027158-9027284)
chr6 (90-122)||(426480-426512)
chr6 (198-230)||(785508-785540)
chr6 (90-122)||(7977772-7977804)
chr6 (90-122)||(12236744-12236776)
[»] chr1 (10 HSPs)
chr1 (127-228)||(46348378-46348479)
chr1 (90-136)||(2218299-2218345)
chr1 (90-136)||(16297223-16297269)
chr1 (90-136)||(46940750-46940796)
chr1 (127-230)||(52903210-52903313)
chr1 (175-224)||(18556499-18556548)
chr1 (90-131)||(31694641-31694682)
chr1 (90-122)||(9630563-9630595)
chr1 (90-122)||(16812641-16812673)
chr1 (90-130)||(38078603-38078643)
[»] chr7 (10 HSPs)
chr7 (175-230)||(18215229-18215284)
chr7 (90-165)||(28155596-28155671)
chr7 (127-230)||(15680770-15680873)
chr7 (175-228)||(37742486-37742539)
chr7 (196-229)||(21139057-21139090)
chr7 (90-135)||(35862023-35862068)
chr7 (201-229)||(17851375-17851403)
chr7 (127-167)||(18213028-18213068)
chr7 (199-231)||(26329467-26329499)
chr7 (90-122)||(32093956-32093988)
[»] chr2 (7 HSPs)
chr2 (200-239)||(27084220-27084259)
chr2 (175-230)||(37558938-37558993)
chr2 (90-136)||(10535687-10535733)
chr2 (199-229)||(1886955-1886985)
chr2 (90-136)||(11223795-11223841)
chr2 (90-122)||(35056964-35056996)
chr2 (90-122)||(44635578-44635610)
[»] scaffold0004 (1 HSPs)
scaffold0004 (90-137)||(92892-92939)
[»] scaffold0793 (1 HSPs)
scaffold0793 (201-229)||(4964-4992)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 5e-78; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 230 - 377
Target Start/End: Complemental strand, 55452504 - 55452357
Alignment:
Q  230 gggataagttatctttgcattgtaaattcacaagcttcagaattcatagagggagatattaaacacagggttttcatgctatatattttggttttcagct 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55452504 gggataagttatctttgcattgtaaattcacaagcttcagaattcatagagggagatattaaacacagggttttcatgctatatattttggttttcagct 55452405  T
Q  330 tttatcaacaaaatatgtggagcgcacattgccatggacatggagtat 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55452404 tttatcaacaaaatatgtggagcgcacattgccatggacatggagtat 55452357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 18513177 - 18513223
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||    
T  18513177 atgaagcacggacactcctcagattaggcgtgtcctggtgtcggaca 18513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 35157980 - 35158063
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcgtcagcgtgtcagtgtccgtgt 210  Q
    ||||| |||| |||||| ||||||||| | |||||||||||       ||||||||||| ||||| ||||||||||||||||||    
T  35157980 gtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgt 35158063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 20633588 - 20633535
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgacatcgacac 143  Q
    |||||||||||||||||||  ||||||||||||  |||||||||||| ||||||    
T  20633588 atgaagcacgaacactccttggattaggcgtgtcttggtgtccgacaccgacac 20633535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 22440559 - 22440635
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgacatcgacacatataattactccaaattatgtga 167  Q
    |||||||||| ||||||||| |||||||||||| || ||||| |||| || ||||||||||||| |  ||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggaca-cgtcacatataattacactgaattatgtga 22440635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 10499229 - 10499305
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgacatcgacacatataattactccaaattatgtga 167  Q
    |||||||||| ||| ||||| ||||||||||||   || ||||||||  ||||||||||||||| | |||||||||||    
T  10499229 atgaagcacggacaatcctcggattaggcgtgtgtcgg-gtccgacactgacacatataattacactaaattatgtga 10499305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Original strand, 753014 - 753042
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||    
T  753014 gtgtccgtgtctgtatccgtgcttcatag 753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 11596299 - 11596331
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||| ||||||||||||||||||||||    
T  11596299 atgaagcacggacactcctcagattaggcgtgt 11596331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 12895216 - 12895248
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||||||||||||| ||||||||||||    
T  12895216 atgaagcacgaacactcctcggattaggcgtgt 12895248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 29205585 - 29205553
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||||||||||||| ||||||||||||    
T  29205585 atgaagcacgaacactcctcggattaggcgtgt 29205553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 30298962 - 30298910
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcat 227  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||| |||||||||    
T  30298962 aaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 30327830 - 30327778
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcat 227  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||| |||||||||    
T  30327830 aaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 34306746 - 34306778
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||||||| ||||||||||||||||||    
T  34306746 atgaagcacgaacattcctcagattaggcgtgt 34306778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 6e-53; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 8101819 - 8101940
Alignment:
Q  15 atcactctcttcttcatcactgttaacaacataatcagagttagatacactttcatatccagactactgtataccatgaagcacgaacactcctcagatt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8101819 atcactctcttcttcatcactgttaacaacataatcagagttagatacactttcatatccagactactgtatactatgaagcacgaacactcctcagatt 8101918  T
Q  115 aggcgtgtactggtgtccgaca 136  Q
    || |||||||  ||||||||||    
T  8101919 agacgtgtaccagtgtccgaca 8101940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 25775624 - 25775578
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca 25775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 1852639 - 1852600
Alignment:
Q  189 gtcagcgtgtcagtgtccgtgtctgtatccgtgcttcata 228  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  1852639 gtcagcgtgtccgtgtccgtatctgtatccgtgcttcata 1852600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 40052429 - 40052383
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||||||||||||| |||||||||||| | |||||| ||||    
T  40052429 atgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 25211647 - 25211606
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtc 131  Q
    ||||||||| |||||| |||||||||||||||| ||||||||    
T  25211647 atgaagcacaaacacttctcagattaggcgtgtcctggtgtc 25211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Original strand, 3164112 - 3164140
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||    
T  3164112 gtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 11610626 - 11610594
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||| ||||||||||||||||||||||    
T  11610626 atgaagcacggacactcctcagattaggcgtgt 11610594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 37077356 - 37077320
Alignment:
Q  193 gcgtgtcagtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  37077356 gcgtgtcactgtccgtgtctttatccgtgcttcatag 37077320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 36450797 - 36450854
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcatagggg 232  Q
    ||||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||    
T  36450797 aaattattagttgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatagggg 36450854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 13844591 - 13844689
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttca 226  Q
    |||||||||| |||||||||||||||| |  ||||||||||       |||||||||| || ||| ||||||| |||| ||||||||||| |||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgt-cgtgtctgtattcgtgcttca 13844689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 34897149 - 34897109
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtga 167  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtga 34897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Original strand, 43737900 - 43737928
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||    
T  43737900 gtgtccgtgtctgtatccgtgcttcatag 43737928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 135265 - 135347
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtc-----cgacatcgacacatataattactccaaattatgtga 167  Q
    ||||||||||||||| ||||||||||||||||| ||||||||     ||||| |||||||||||||||| |  ||||||||||    
T  135265 atgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacgacaccgacacatataattacacagaattatgtga 135347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 14674285 - 14674231
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcatag 229  Q
    ||||||||||  | ||| |||||||||||||||||||||||||||||||||||||    
T  14674285 aaattattagctgtgtcggcgtgtcagtgtccgtgtctgtatccgtgcttcatag 14674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 2437028 - 2436908
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtc-----cgacatcgacacatataattactccaaattatgtgannnnnnnaaattattag 184  Q
    |||||||||||||||||||| ||||||||||||  |||||||     ||||| ||||||||||||| ||  | ||||||||||       ||||||||||    
T  2437028 atgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattag 2436929  T
Q  185 tagcgtcagcgtgtcagtgtc 205  Q
      | ||| |||||||||||||    
T  2436928 cggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 39205876 - 39205837
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcataggggataagtta 240  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  39205876 gtgtccgtgtctgtatccgtgcttcatagaggatgagtta 39205837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 229
Target Start/End: Original strand, 7175082 - 7175116
Alignment:
Q  195 gtgtcagtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||| ||||||||||    
T  7175082 gtgtcagtgtccgtgtctgtatccatgcttcatag 7175116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 27932352 - 27932306
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    ||||||||| ||||||||||  ||||||||||| |||||||||||||    
T  27932352 atgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgaca 27932306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 43001816 - 43001762
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||| || |||  | |||||||||||||||| |||||||||||||||||    
T  43001816 aaattattagcagtgtcgacatgtcagtgtccgtgtccgtatccgtgcttcatag 43001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Complemental strand, 6401470 - 6401442
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||    
T  6401470 gtgtccgtgtctgtatccgtgcttcatag 6401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 16941987 - 16942023
Alignment:
Q  194 cgtgtcagtgtccgtgtctgtatccgtgcttcatagg 230  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  16941987 cgtgtccgtgtccgtgtctgtatccgtgcttcgtagg 16942023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 232
Target Start/End: Original strand, 17841584 - 17841689
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttca 226  Q
    |||||||||| || ||| | ||||||| | |||||||||||       ||||||||||  | ||| ||||||||||||||||||| ||||| ||||||||    
T  17841584 gtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatcagtgcttca 17841683  T
Q  227 tagggg 232  Q
    ||||||    
T  17841684 tagggg 17841689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 21924907 - 21924956
Alignment:
Q  104 ctcctcagattaggcgtgtactggtgtccgacatcgacacatataattac 153  Q
    |||||| |||||||||||| | ||||||||||| ||||||||||||||||    
T  21924907 ctcctcggattaggcgtgtcccggtgtccgacaccgacacatataattac 21924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 7938217 - 7938096
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcg 189  Q
    |||||||||| ||||||||| ||| ||||||||   |||||| |||| |||||| ||||||||| | ||||||| |||       ||||||||||  | |    
T  7938217 atgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtg 7938118  T
Q  190 tcagcgtgtcagtgtccgtgtc 211  Q
    || |||||||||||||| ||||    
T  7938117 tcggcgtgtcagtgtccatgtc 7938096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 17302572 - 17302518
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcatag 229  Q
    ||||||||||| | |||||||||||||||| |||||| ||||| | |||||||||    
T  17302572 aaattattagttgtgtcagcgtgtcagtgttcgtgtccgtatctgcgcttcatag 17302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 5569866 - 5569825
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtc 131  Q
    |||||||||| |||||||||||||||||||||| | ||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgttcaggtgtc 5569825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 9027284 - 9027158
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtc-----cgacatcgacacatataattactccaaattatgtgannnnnnnaaattattag 184  Q
    ||||||||| |||||||||  |||||| ||||| | ||||||     ||||| |||||||||||||||| |  ||||||||||       ||||||||||    
T  9027284 atgaagcacaaacactccttggattagccgtgtcccggtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattag 9027185  T
Q  185 tagcgtcagcgtgtcagtgtccgtgtc 211  Q
      | ||| |||||||||||||||||||    
T  9027184 cggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 426480 - 426512
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||| ||||||||||||||||||||||    
T  426480 atgaagcacggacactcctcagattaggcgtgt 426512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 785508 - 785540
Alignment:
Q  198 tcagtgtccgtgtctgtatccgtgcttcatagg 230  Q
    ||||||||||||||||| |||||||||||||||    
T  785508 tcagtgtccgtgtctgtgtccgtgcttcatagg 785540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 7977772 - 7977804
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    ||||||||||||||||||| |||||||||||||    
T  7977772 atgaagcacgaacactccttagattaggcgtgt 7977804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 12236776 - 12236744
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||||||||||||||| ||||||||||    
T  12236776 atgaagcacgaacactcctcaggttaggcgtgt 12236744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 46348378 - 46348479
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttca 226  Q
    |||||||||| |||||| | ||||||| | ||||||| |||       ||||||||||  | ||| ||||||||||||||||||| ||||||||||||||    
T  46348378 gtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttca 46348477  T
Q  227 ta 228  Q
    ||    
T  46348478 ta 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 2218345 - 2218299
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||| |||||||||||||||||||||| || ||||| ||||    
T  2218345 atgaagcacggacactcctcagattaggcgtgtcctagtgtcggaca 2218299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 16297223 - 16297269
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||| ||||||||| |||||||||||| |||||||| ||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggaca 16297269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 46940750 - 46940796
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||||||||||||| |||||||||||| | |||||| ||||    
T  46940750 atgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 52903313 - 52903210
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttca 226  Q
    |||||||||| |||||||||||||||| |  |||||| |||       |||||||||   |  || |||||| |||||||||||||||||| ||||||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtctgtatctgtgcttca 52903214  T
Q  227 tagg 230  Q
    ||||    
T  52903213 tagg 52903210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 18556499 - 18556548
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgctt 224  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||||||||    
T  18556499 aaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgctt 18556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 31694641 - 31694682
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtc 131  Q
    |||||||||| |||||||||||||||||||||| | ||||||    
T  31694641 atgaagcacggacactcctcagattaggcgtgttccggtgtc 31694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 9630563 - 9630595
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||||||||||||| ||||||||||||    
T  9630563 atgaagcacgaacactcctcggattaggcgtgt 9630595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 16812673 - 16812641
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||| ||||||||||||||||||||||    
T  16812673 atgaagcacggacactcctcagattaggcgtgt 16812641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 38078603 - 38078643
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgt 130  Q
    |||||||||||| ||||||| |||||||||||| |||||||    
T  38078603 atgaagcacgaatactcctcggattaggcgtgtcctggtgt 38078643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 18215229 - 18215284
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcatagg 230  Q
    ||||||||||  ||||| |||||| |||||||||||||| ||||||||||||||||    
T  18215229 aaattattagctgcgtcggcgtgttagtgtccgtgtctgcatccgtgcttcatagg 18215284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 28155671 - 28155596
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgacatcgacacatataattactccaaattatgt 165  Q
    |||||||||| ||| ||||  |||||||||||| ||||||||||||| |||||| | ||||||| || ||||||||    
T  28155671 atgaagcacggacattccttggattaggcgtgtcctggtgtccgacaccgacacttgtaattacaccgaattatgt 28155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 15680873 - 15680770
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtgannnnnnnaaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttca 226  Q
    |||||||||| |||||| ||||||||| | |||||||||||        |||||||||    ||| |||||||||||||| |||| ||||||||||||||    
T  15680873 gtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtccgtatccgtgcttca 15680774  T
Q  227 tagg 230  Q
    ||||    
T  15680773 tagg 15680770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 37742539 - 37742486
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcata 228  Q
    ||||||||||| | ||| ||||| ||||||||||||||||||||||| ||||||    
T  37742539 aaattattagtggtgtcggcgtggcagtgtccgtgtctgtatccgtgtttcata 37742486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 21139057 - 21139090
Alignment:
Q  196 tgtcagtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||| |||||||||||||||||||||||    
T  21139057 tgtcagtgtctgtgtctgtatccgtgcttcatag 21139090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 35862068 - 35862023
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgac 135  Q
    |||||||||| ||||||||| |||||||||||| || |||||||||    
T  35862068 atgaagcacggacactcctcggattaggcgtgtcctcgtgtccgac 35862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Complemental strand, 17851403 - 17851375
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||    
T  17851403 gtgtccgtgtctgtatccgtgcttcatag 17851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 18213028 - 18213068
Alignment:
Q  127 gtgtccgacatcgacacatataattactccaaattatgtga 167  Q
    |||||||||| |||||||||||||||| | |||||||||||    
T  18213028 gtgtccgacaccgacacatataattacactaaattatgtga 18213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 26329467 - 26329499
Alignment:
Q  199 cagtgtccgtgtctgtatccgtgcttcataggg 231  Q
    |||||||||||||||||| ||||||||||||||    
T  26329467 cagtgtccgtgtctgtattcgtgcttcataggg 26329499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 32093956 - 32093988
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||||||||||||| ||||||||||||    
T  32093956 atgaagcacgaacactcctcggattaggcgtgt 32093988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 27084259 - 27084220
Alignment:
Q  200 agtgtccgtgtctgtatccgtgcttcataggggataagtt 239  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  27084259 agtgtccgtgtccgtatccgtgcttcataggggataagtt 27084220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 37558993 - 37558938
Alignment:
Q  175 aaattattagtagcgtcagcgtgtcagtgtccgtgtctgtatccgtgcttcatagg 230  Q
    ||||||||||  | ||| ||||||||||||||||||| ||||||||||||||||||    
T  37558993 aaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 37558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 10535687 - 10535733
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||    
T  10535687 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcagaca 10535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 229
Target Start/End: Original strand, 1886955 - 1886985
Alignment:
Q  199 cagtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||||    
T  1886955 cagtgtccgtgtctgtatccgtgcttcatag 1886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 11223795 - 11223841
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgaca 136  Q
    |||||||||| |||||||||||||||||||||| | |||||| ||||    
T  11223795 atgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 35056996 - 35056964
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||| ||||||||||||||||||||||    
T  35056996 atgaagcacggacactcctcagattaggcgtgt 35056964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 44635610 - 44635578
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgt 122  Q
    |||||||||| ||||||||||||||||||||||    
T  44635610 atgaagcacggacactcctcagattaggcgtgt 44635578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 92939 - 92892
Alignment:
Q  90 atgaagcacgaacactcctcagattaggcgtgtactggtgtccgacat 137  Q
    |||||||||| ||||||||| |||||||||||| | ||||||||||||    
T  92939 atgaagcacggacactcctcggattaggcgtgtccaggtgtccgacat 92892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Original strand, 4964 - 4992
Alignment:
Q  201 gtgtccgtgtctgtatccgtgcttcatag 229  Q
    |||||||||||||||||||||||||||||    
T  4964 gtgtccgtgtctgtatccgtgcttcatag 4992  T

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