View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8703_high_11 (Length: 255)
Name: NF8703_high_11
Description: NF8703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8703_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 6711485 - 6711273
Alignment:
| Q |
18 |
gaaattaagtcaaacaattatgtagattttacttgggataggcagcccnnnnnnnnngataatgcaattggtctcatatcaaaatttaaactaattaatt |
117 |
Q |
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| T |
6711485 |
gaaattaagtcaaacaattatgtagattttacttgggataggcagcccaaaaaaaa--aaaatgcaattggtctcatatcaaaatttaaactaattaatt |
6711388 |
T |
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| Q |
118 |
caggaaaaattgtacattcaagttgattaatagaaactataaaaggacactcatatgaaatatgaaaattttctaaattttattgaaggttgctagatta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |
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| T |
6711387 |
caggaaaaattgtacattcaagttgattaatagaaactataaaaggacactcatatgaaatatgaaaactttctaaattttattgaag-----ttgatta |
6711293 |
T |
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| Q |
218 |
aatatgaacaccatgcaatt |
237 |
Q |
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|||||||||||||||||||| |
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| T |
6711292 |
aatatgaacaccatgcaatt |
6711273 |
T |
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