View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8705_high_4 (Length: 369)
Name: NF8705_high_4
Description: NF8705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8705_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 14671671 - 14672021
Alignment:
| Q |
1 |
taggtttacctttgaagattggtgctcccaagtaagagattcgaagagagccagctgagaaccctaaaaggttagcaatgaaggcttgcctttgagttaa |
100 |
Q |
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| T |
14671671 |
taggtttacctttgaagattggtgctcccaagtaagagattcgaagagagccagctgagaaccctaaaaggttagcaatgaaggcttgcctttgagttaa |
14671770 |
T |
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| Q |
101 |
catagaccctgagaagaaaatggattttgttggattgataacttgtactaaatagctagcatatctgttgaaacgatttataattgcattgatagaagaa |
200 |
Q |
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| T |
14671771 |
catagaccctgagaagaaaatggattttgttggattgataacttgtcctaaatagctagcatatctgttgaaaagatttataattgcattgatagaagaa |
14671870 |
T |
|
| Q |
201 |
agcagtgcattataaattcttcatttgagggtaatatggtcatcatagcattagtttgattttgtatcaaatttggaatcacttcttatgtaagtccatc |
300 |
Q |
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| T |
14671871 |
agcagtgcattataaattcttcatttgagggtaatatggtcatcatagcattagtttgattttgtatcaaatttggaatcacttcttatgtaagtccatc |
14671970 |
T |
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| Q |
301 |
atgctgcaaaattgaagagttattaaataaatcagcgtaatggtggattat |
351 |
Q |
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| T |
14671971 |
atgctgcaaaattgaagagttattaaataaatcagcgtaatggtggattat |
14672021 |
T |
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