View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8705_low_10 (Length: 246)
Name: NF8705_low_10
Description: NF8705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8705_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 23888507 - 23888283
Alignment:
| Q |
1 |
acctgaagctgacacaacacaatgaacataatgctattcaccgaggccagaaacccgaatgcagctggctggctactatatatatgataaacctgaactg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23888507 |
acctgaagctgacacaacacaatgaacataatgctattcaccgaggccagaaacccgaatgcagctggctggctactatatatatgataaacctgaactg |
23888408 |
T |
|
| Q |
101 |
aaggcattttgataagccatgccaacggtataagatattggcccaatacacactaaacttccaaatgcaatgaacatggtccatgtgctggctaatgcaa |
200 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23888407 |
aaggcattttgataagccatgccaacggtgtaagatattggcccaatacacactaaacttccaaatgcaatgaacatggtccatgtgctggctaatgcaa |
23888308 |
T |
|
| Q |
201 |
gagccatagatagatcctcctgcct |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
23888307 |
gagccatagatagatcctcctgcct |
23888283 |
T |
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